mRNA_P-wetherbeei_contig590.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig590.6.1
Unique NamemRNA_P-wetherbeei_contig590.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig590.6.1 vs. uniprot
Match: S7Q492_GLOTA (Acyltransferase ChoActase/COT/CPT n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) TaxID=670483 RepID=S7Q492_GLOTA)

HSP 1 Score: 61.6 bits (148), Expect = 2.100e-6
Identity = 43/104 (41.35%), Postives = 50/104 (48.08%), Query Frame = 2 
Query:  305 AVYETAHTRRFWHGRTEAVRSLSAESAAFVAAMLDPGTCDADFPSAVCAVGVSEPTPKSMEATVTKRAADSTRAALLRAALVRHRATARRSASAMGIDRHIFGL 616
            AVYETA TR F HGRTE +RSL+ ES AFV AMLDP   D D   A+C                               A+ RH    R +A+  GIDRH+ GL
Sbjct:  499 AVYETALTRLFLHGRTETIRSLTTESRAFVLAMLDPSALDTDRYRALCR------------------------------AVQRHVVLTREAATGKGIDRHLLGL 572
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BLAST of mRNA_P-wetherbeei_contig590.6.1 vs. uniprot
Match: A0A4Q9PU06_9APHY (Acyltransferase ChoActase/COT/CPT n=3 Tax=Dichomitus squalens TaxID=114155 RepID=A0A4Q9PU06_9APHY)

HSP 1 Score: 58.9 bits (141), Expect = 1.460e-5
Identity = 42/104 (40.38%), Postives = 54/104 (51.92%), Query Frame = 2 
Query:  305 AVYETAHTRRFWHGRTEAVRSLSAESAAFVAAMLDPGTCDADFPSAVCAVGVSEPTPKSMEATVTKRAADSTRAALLRAALVRHRATARRSASAMGIDRHIFGL 616
            A YETA TR F HGRTE +R+LSA+S A+V AM DP  C+                             D+TR  LLR A+  H +  RR+A+  G+DRH+ GL
Sbjct:  485 ATYETALTRAFQHGRTETIRTLSADSRAWVLAMADPH-CE-----------------------------DATRLELLRRAVQTHTSLTRRAATGRGVDRHLLGL 558
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BLAST of mRNA_P-wetherbeei_contig590.6.1 vs. uniprot
Match: A0A2G8SP87_9APHY (Transporter n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SP87_9APHY)

HSP 1 Score: 57.4 bits (137), Expect = 4.490e-5
Identity = 42/104 (40.38%), Postives = 51/104 (49.04%), Query Frame = 2 
Query:  305 AVYETAHTRRFWHGRTEAVRSLSAESAAFVAAMLDPGTCDADFPSAVCAVGVSEPTPKSMEATVTKRAADSTRAALLRAALVRHRATARRSASAMGIDRHIFGL 616
            A YET  TR F HGRTE +R+LSA+S A+V AM DP + +A                              TR  LLR AL  H    RR+A+  GIDRH+ GL
Sbjct:  501 ATYETVLTRLFKHGRTETIRTLSADSRAWVLAMADPHSSNA------------------------------TRLELLRRALQTHTGATRRAATGRGIDRHLLGL 574
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BLAST of mRNA_P-wetherbeei_contig590.6.1 vs. uniprot
Match: S8EDA4_FOMPI (Carn_acyltransf domain-containing protein n=1 Tax=Fomitopsis pinicola (strain FP-58527) TaxID=743788 RepID=S8EDA4_FOMPI)

HSP 1 Score: 56.6 bits (135), Expect = 7.580e-5
Identity = 43/102 (42.16%), Postives = 53/102 (51.96%), Query Frame = 2 
Query:  311 YETAHTRRFWHGRTEAVRSLSAESAAFVAAMLDPGTCDADFPSAVCAVGVSEPTPKSMEATVTKRAADSTRAALLRAALVRHRATARRSASAMGIDRHIFGL 616
            YE A TRRF+ GRTEAVR +SAE+ A+VA+M DPG            VG  E                  R  L R A+  H A ARR+ + +GIDRH+ GL
Sbjct:  456 YEAAATRRFFKGRTEAVRVVSAEADAWVASMDDPG------------VGAEE------------------RGRLFRKAVETHVARARRAGNGLGIDRHLLGL 527
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BLAST of mRNA_P-wetherbeei_contig590.6.1 vs. uniprot
Match: A0A8J6CE33_DIALT (Carn_acyltransf domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CE33_DIALT)

HSP 1 Score: 56.2 bits (134), Expect = 9.890e-5
Identity = 42/106 (39.62%), Postives = 48/106 (45.28%), Query Frame = 2 
Query:  299 PVAVYETAHTRRFWHGRTEAVRSLSAESAAFVAAMLDPGTCDADFPSAVCAVGVSEPTPKSMEATVTKRAADSTRAALLRAALVRHRATARRSASAMGIDRHIFGL 616
            PVA YET HTR F+HGRTE +RS S ES AF  AM D  T  AD  +A                              LRAAL  H   A+ + S    DRH+ GL
Sbjct:  429 PVATYETGHTRAFFHGRTETIRSCSLESVAFCKAMADAATKPADALAA------------------------------LRAALTAHGEFAQLALSGRACDRHLLGL 504
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig590.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
S7Q492_GLOTA2.100e-641.35Acyltransferase ChoActase/COT/CPT n=1 Tax=Gloeophy... [more]
A0A4Q9PU06_9APHY1.460e-540.38Acyltransferase ChoActase/COT/CPT n=3 Tax=Dichomit... [more]
A0A2G8SP87_9APHY4.490e-540.38Transporter n=1 Tax=Ganoderma sinense ZZ0214-1 Tax... [more]
S8EDA4_FOMPI7.580e-542.16Carn_acyltransf domain-containing protein n=1 Tax=... [more]
A0A8J6CE33_DIALT9.890e-539.62Carn_acyltransf domain-containing protein n=2 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig590contigP-wetherbeei_contig590:8053..9472 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog104355.XP_007867622.1
PFAMsCarn_acyltransf
Model size1420
Max annot lvl4751|Fungi
KEGG rclassRC00004,RC00037
KEGG koko:K00624
KEGG ReactionR02396
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.7e-07
EggNOG OGsKOG3717@1|root,KOG3717@2759|Eukaryota,38CAT@33154|Opisthokonta,3NZD8@4751|Fungi,3UYYW@5204|Basidiomycota,22FS0@155619|Agaricomycetes,3H93C@355688|Agaricomycetes incertae sedis
EC2.3.1.7
DescriptionAcyltransferase ChoActase COT CPT
Cds size1269
COG categoryI
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186872.4215775-UTR-P-wetherbeei_contig590:8052..80581683186872.4215775-UTR-P-wetherbeei_contig590:8052..8058Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig590 8053..8058 -
1683186872.4546134-UTR-P-wetherbeei_contig590:9327..94721683186872.4546134-UTR-P-wetherbeei_contig590:9327..9472Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig590 9328..9472 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186872.4343393-CDS-P-wetherbeei_contig590:8058..93271683186872.4343393-CDS-P-wetherbeei_contig590:8058..9327Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig590 8059..9327 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig590.6.1prot_P-wetherbeei_contig590.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig590 8059..9327 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig590.6.1

>prot_P-wetherbeei_contig590.6.1 ID=prot_P-wetherbeei_contig590.6.1|Name=mRNA_P-wetherbeei_contig590.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=423bp
MLAAALAPAPPAAGENDRALLLPMAPSRRFSPPLPAATAATVTAAMAATA
APVAVYETAHTRRFWHGRTEAVRSLSAESAAFVAAMLDPGTCDADFPSAV
CAVGVSEPTPKSMEATVTKRAADSTRAALLRAALVRHRATARRSASAMGI
DRHIFGLARVAADARAAAAAAATAATAAAAAAVPGNRAGAELEAITAAVP
PAWELPAVAAAVEAMEALAGDPVFRRAQRWVLSTSSVTGVPDVTPLADRP
HTRRHRGRRGGSGSGGDEAATGSTAGADASPLYAAAVPAGVVADRRAVTR
DAEAVTPEAVPGAVTDEAVPMWAGYAPAVPDGYGCCYAIDDGMLHCVASC
YQGRRRPEDGAGPGLANSGKVPGTDTDSGAAAIGRAARFLREFRRALADV
VALLEADGGSGCLDRLPVQSKL*
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mRNA from alignment at P-wetherbeei_contig590:8053..9472-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig590.6.1 ID=mRNA_P-wetherbeei_contig590.6.1|Name=mRNA_P-wetherbeei_contig590.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1420bp|location=Sequence derived from alignment at P-wetherbeei_contig590:8053..9472- (Phaeothamnion wetherbeei SAG_119_79)
GCTCGCGGCGATTTCAGCTGCAACCGGTGCTGGCAGTGGTTTGGATTTTG
GCATTTTGGGAGCAGCGACGGAATCTCCGGCGGATGAAGGTTCAGCATCG
GCGGGACGGAGGAAACTGGAGCTAGGGGAAGAGGGAGGTGTGACAATGCT
CGCAGCGGCGCTGGCGCCGGCACCGCCCGCAGCCGGTGAGAACGACCGGG
CTCTTCTTCTTCCAATGGCTCCTTCGAGGAGGTTTTCTCCTCCGCTGCCG
GCAGCCACAGCGGCGACCGTCACCGCGGCGATGGCGGCGACGGCAGCGCC
GGTGGCGGTGTACGAGACGGCGCACACGCGGCGCTTCTGGCACGGGCGCA
CCGAGGCGGTCCGCAGCCTGTCGGCTGAAAGCGCCGCGTTCGTCGCCGCC
ATGCTCGACCCGGGGACGTGCGACGCTGATTTCCCTTCCGCTGTTTGCGC
CGTGGGTGTTTCTGAGCCGACACCCAAATCGATGGAGGCGACTGTTACGA
AGCGAGCGGCAGATTCGACACGGGCGGCGCTGCTGCGTGCCGCTCTGGTG
CGGCACAGAGCGACGGCGCGGCGGTCGGCGTCCGCCATGGGCATCGACCG
CCATATTTTCGGCCTTGCCCGTGTCGCCGCCGACGCACGCGCGGCGGCGG
CTGCGGCGGCTACGGCGGCGACTGCGGCTGCGGCTGCGGCGGTCCCAGGA
AATCGGGCGGGGGCAGAATTAGAAGCCATTACGGCGGCTGTTCCGCCAGC
ATGGGAGCTGCCGGCGGTCGCAGCAGCGGTTGAGGCAATGGAGGCGCTGG
CGGGAGACCCGGTCTTTCGCCGGGCGCAGCGGTGGGTCCTGAGCACCTCC
AGCGTCACCGGCGTTCCGGACGTCACCCCCCTAGCTGACCGGCCGCACAC
CCGTCGACACCGCGGCAGGAGAGGCGGCAGCGGTAGCGGCGGCGACGAAG
CCGCAACTGGCAGCACCGCTGGAGCTGATGCTTCGCCGCTATACGCCGCG
GCCGTTCCGGCGGGTGTTGTGGCTGATCGAAGGGCCGTCACGCGGGATGC
CGAAGCGGTTACTCCCGAAGCGGTTCCCGGAGCTGTAACGGACGAAGCGG
TGCCGATGTGGGCGGGGTACGCGCCGGCTGTGCCCGATGGGTACGGTTGC
TGCTACGCCATCGACGACGGCATGCTGCACTGCGTCGCCAGCTGCTACCA
GGGTCGGAGGCGCCCGGAGGATGGGGCCGGACCGGGTCTGGCAAACTCCG
GGAAAGTTCCTGGAACTGACACGGATTCGGGAGCAGCGGCGATCGGGCGT
GCCGCGAGGTTTCTGCGGGAATTTCGGCGGGCACTGGCGGACGTGGTAGC
GTTGCTGGAAGCCGACGGTGGCAGTGGCTGCCTCGACCGCCTACCAGTAC
AATCAAAACTGTGACCCTTA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig590:8053..9472-

>mRNA_P-wetherbeei_contig590.6.1 ID=mRNA_P-wetherbeei_contig590.6.1|Name=mRNA_P-wetherbeei_contig590.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1269bp|location=Sequence derived from alignment at P-wetherbeei_contig590:8053..9472- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTCGCAGCGGCGCTGGCGCCGGCACCGCCCGCAGCCGGTGAGAACGA
CCGGGCTCTTCTTCTTCCAATGGCTCCTTCGAGGAGGTTTTCTCCTCCGC
TGCCGGCAGCCACAGCGGCGACCGTCACCGCGGCGATGGCGGCGACGGCA
GCGCCGGTGGCGGTGTACGAGACGGCGCACACGCGGCGCTTCTGGCACGG
GCGCACCGAGGCGGTCCGCAGCCTGTCGGCTGAAAGCGCCGCGTTCGTCG
CCGCCATGCTCGACCCGGGGACGTGCGACGCTGATTTCCCTTCCGCTGTT
TGCGCCGTGGGTGTTTCTGAGCCGACACCCAAATCGATGGAGGCGACTGT
TACGAAGCGAGCGGCAGATTCGACACGGGCGGCGCTGCTGCGTGCCGCTC
TGGTGCGGCACAGAGCGACGGCGCGGCGGTCGGCGTCCGCCATGGGCATC
GACCGCCATATTTTCGGCCTTGCCCGTGTCGCCGCCGACGCACGCGCGGC
GGCGGCTGCGGCGGCTACGGCGGCGACTGCGGCTGCGGCTGCGGCGGTCC
CAGGAAATCGGGCGGGGGCAGAATTAGAAGCCATTACGGCGGCTGTTCCG
CCAGCATGGGAGCTGCCGGCGGTCGCAGCAGCGGTTGAGGCAATGGAGGC
GCTGGCGGGAGACCCGGTCTTTCGCCGGGCGCAGCGGTGGGTCCTGAGCA
CCTCCAGCGTCACCGGCGTTCCGGACGTCACCCCCCTAGCTGACCGGCCG
CACACCCGTCGACACCGCGGCAGGAGAGGCGGCAGCGGTAGCGGCGGCGA
CGAAGCCGCAACTGGCAGCACCGCTGGAGCTGATGCTTCGCCGCTATACG
CCGCGGCCGTTCCGGCGGGTGTTGTGGCTGATCGAAGGGCCGTCACGCGG
GATGCCGAAGCGGTTACTCCCGAAGCGGTTCCCGGAGCTGTAACGGACGA
AGCGGTGCCGATGTGGGCGGGGTACGCGCCGGCTGTGCCCGATGGGTACG
GTTGCTGCTACGCCATCGACGACGGCATGCTGCACTGCGTCGCCAGCTGC
TACCAGGGTCGGAGGCGCCCGGAGGATGGGGCCGGACCGGGTCTGGCAAA
CTCCGGGAAAGTTCCTGGAACTGACACGGATTCGGGAGCAGCGGCGATCG
GGCGTGCCGCGAGGTTTCTGCGGGAATTTCGGCGGGCACTGGCGGACGTG
GTAGCGTTGCTGGAAGCCGACGGTGGCAGTGGCTGCCTCGACCGCCTACC
AGTACAATCAAAACTGTGA
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