mRNA_P-wetherbeei_contig590.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig590.1.3
Unique NamemRNA_P-wetherbeei_contig590.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A835YXQ7_9STRA (SAS-6_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXQ7_9STRA)

HSP 1 Score: 323 bits (828), Expect = 3.910e-107
Identity = 160/220 (72.73%), Postives = 189/220 (85.91%), Query Frame = 3
Query:  141 VANIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQRSATFG---GAGA*FR 791
            +   +++ I+++DPS ADGF+ VYDREVPFELRVQ+ A GPQH+GTLEAIKVKVL LGD A PQ VRVELSSEADLFFH+MHV D+ A+ AMQEQQ+L +DF DYP +LIR+LN CI+EPH+HLAV VM H+  ARLDFIQNMEYKF+EL+SL F+RSPEDVVQHQITYRYNAMKSRLALM ARLQD+NNLVKLKNPSLLLQLQ+++ FG   G+G+  R
Sbjct:    1 MQTFEYTSIEDMDPSVADGFRIVYDREVPFELRVQDGADGPQHVGTLEAIKVKVLVLGDGALPQGVRVELSSEADLFFHYMHVVDEGAFAAMQEQQRLTLDFADYPAVLIRMLNQCIREPHSHLAVYVMQHELDARLDFIQNMEYKFIELLSLHFTRSPEDVVQHQITYRYNAMKSRLALMQARLQDVNNLVKLKNPSLLLQLQKTSGFGSPLGSGSPLR 220          
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: D7FKW8_ECTSI (SAS-6_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW8_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 7.870e-107
Identity = 157/205 (76.59%), Postives = 181/205 (88.29%), Query Frame = 3
Query:  138 DVANIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQ 752
            ++   DF  I+E+DPS ADGF+ +YDREVPFELRVQE+A GPQ +GTLEAIKVKVL LGD A PQ+VRVELSSEADLFFH+ H  DD ++Q MQE+QKLMV+F DYPN+LIR+LN+CIKEPH+HL V VM HD +ARLDFIQNMEYKFVELMSLQ++RS ED+VQHQITYRYNAMKSRLALM ARLQ++NNLVKLKNPSLLLQLQ
Sbjct:    4 ELQTCDFGAIEEMDPSIADGFRVIYDREVPFELRVQESADGPQQVGTLEAIKVKVLMLGDDAAPQSVRVELSSEADLFFHYTHSIDDASFQVMQEEQKLMVEFQDYPNVLIRMLNNCIKEPHSHLVVFVMQHDVNARLDFIQNMEYKFVELMSLQYTRSAEDIVQHQITYRYNAMKSRLALMQARLQEVNNLVKLKNPSLLLQLQ 208          
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A6V2Z9A0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2Z9A0_HETAK)

HSP 1 Score: 300 bits (768), Expect = 7.960e-98
Identity = 144/208 (69.23%), Postives = 177/208 (85.10%), Query Frame = 3
Query:  141 VANIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQRSAT 764
            +  +DF+ I+E+DPS  DG + +YDREVPFELRVQ++A GPQ +GTLEAIKVK+L LG+ A P +VRVE SSEADLFFH+ H  D   +Q +QEQQ+LMV+FPDYPN+LIR+LN CI+EPHAHLAV VM  D +ARLDFIQNMEYKFVELM+  F+RS E+VVQ+QITYRYNAMKS+LALM +R+Q++NNLVK+KNPSLLLQLQRS +
Sbjct:   27 MQTLDFTSIEEMDPSIEDGHRIIYDREVPFELRVQDSADGPQQVGTLEAIKVKILILGEDAAPSSVRVECSSEADLFFHYTHQLDSQGFQVVQEQQRLMVEFPDYPNVLIRMLNACIQEPHAHLAVFVMQRDVAARLDFIQNMEYKFVELMTCHFARSTEEVVQYQITYRYNAMKSKLALMQSRMQEVNNLVKMKNPSLLLQLQRSGS 234          
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A7S1XUL9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUL9_9STRA)

HSP 1 Score: 292 bits (748), Expect = 8.720e-95
Identity = 142/210 (67.62%), Postives = 171/210 (81.43%), Query Frame = 3
Query:  129 AEGDVANIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQRS 758
            A  D+   D S I+E+DPS A+GF  +YDREVPFELRVQ+   GP  +GTLEAIKVK+L  GD A P AVR+ELSSEADLF+H+ H+ D+  +Q +QEQQKLMV+F DYPN+LIR+LN+CI+EPH HLAV VM  D +ARLDFIQNMEYKFVELMS  F+RS E+ VQH ITYRYNAMK+RLALM ARL ++ N++KLKNPSLLLQLQR+
Sbjct:    8 AAADLQTFDMSAIEEMDPSCAEGFNVIYDREVPFELRVQQNQDGPSQVGTLEAIKVKILLQGDDARPSAVRIELSSEADLFYHYAHLIDEAGFQVVQEQQKLMVEFADYPNVLIRMLNNCIREPHNHLAVFVMQQDGTARLDFIQNMEYKFVELMSCHFARSSEESVQHHITYRYNAMKTRLALMQARLTEVQNVIKLKNPSLLLQLQRN 217          
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A7S2UUP1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUP1_9STRA)

HSP 1 Score: 287 bits (735), Expect = 8.900e-93
Identity = 141/214 (65.89%), Postives = 172/214 (80.37%), Query Frame = 3
Query:  141 VANIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQRSATFGGAGA 782
            +  +DFS I+E+DPS  DG + +YDREVPFE+R+Q++A  PQ +GTLEAIKVKVL LGD A P++VR+ELSSEADLFFH+ H  D   ++ +Q+QQ+LMV+FPDYPN+LIR+LN+CIKEPH+ LAV VM  D  ARLDFIQNMEYKFVELM+  F  SPED VQ  ITYRY +MKSRLALM  RLQ++NNLVK+KNPSLLLQLQRS     + A
Sbjct:   24 MQTLDFSAIEEMDPSVVDGHRVIYDREVPFEVRLQDSAEAPQQVGTLEAIKVKVLLLGDDANPESVRIELSSEADLFFHYYHQLDLTGFKTVQDQQRLMVEFPDYPNVLIRMLNNCIKEPHSCLAVFVMQQDVHARLDFIQNMEYKFVELMTCHFVHSPEDSVQRHITYRYKSMKSRLALMQNRLQEVNNLVKMKNPSLLLQLQRSGASSASTA 237          
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A7S3KUF3_EUPCR (Hypothetical protein n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KUF3_EUPCR)

HSP 1 Score: 269 bits (687), Expect = 1.130e-85
Identity = 127/203 (62.56%), Postives = 165/203 (81.28%), Query Frame = 3
Query:  150 IDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQRS 758
             DF  IDE+DPS ++G + VY+REVPFELR+Q+   GPQ +GTLEAIKVK+L LG+   P+ ++VELSSE D+FFH+ H  ++ ++  +QE QKLMVD+PDYPN+LI++LN CIKEPH+ LAV +M  D SARLDFIQNMEYKFVEL+S  F  S E+ ++ QIT+RYNA+KS+LA+M ARLQDIN +VK+KNPSLLLQLQ++
Sbjct:   14 FDFQAIDEMDPSLSEGHRIVYEREVPFELRIQDGDTGPQEVGTLEAIKVKILVLGEDGNPEQIKVELSSENDMFFHYTHNIEELSFSKVQESQKLMVDYPDYPNILIKMLNSCIKEPHSFLAVFIMQRDGSARLDFIQNMEYKFVELLSCDFDASTEETIRQQITFRYNAVKSKLAIMQARLQDINAIVKVKNPSLLLQLQKA 216          
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A7S3PI88_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PI88_9STRA)

HSP 1 Score: 269 bits (687), Expect = 2.200e-85
Identity = 129/205 (62.93%), Postives = 164/205 (80.00%), Query Frame = 3
Query:  141 VANIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQR 755
            + NIDFS I+ELDPS +DG++ +YDRE P ELR QETA  PQ +GTLEAIKVK+L  G  + P++V++ELSSE DLFFHF HV D+  ++ MQ+QQKLM+DF +YP +LIR+LN+CIKEPH+HLAV V+     +RLDFI+NMEYKFVEL++  F RS + +V+  I YRYNA+KSRLALM ARL D+N LVK+KNPSLLLQ+ R
Sbjct:   35 LTNIDFSAIEELDPSLSDGYRIIYDRECPVELRFQETAESPQEVGTLEAIKVKMLVTGKDSSPESVKIELSSECDLFFHFTHVVDEVGFRIMQQQQKLMIDFVEYPKVLIRMLNNCIKEPHSHLAVFVIQRSGHSRLDFIKNMEYKFVELLTCNFVRSSDALVKQHIAYRYNAVKSRLALMQARLSDVNALVKIKNPSLLLQINR 239          
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A7S1X654_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X654_9CHLO)

HSP 1 Score: 268 bits (684), Expect = 4.940e-85
Identity = 131/204 (64.22%), Postives = 166/204 (81.37%), Query Frame = 3
Query:  147 NIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQRS 758
            N+DF+ +D+LDPS ADGF   Y+REVPFELR  E +  P  +G LEAI+VKVL LGD   P+A++VELSSE++LFFH++H     +++ +QE QKLMVDF +YP +L+R+LNHCIKEPH++LAV VMH +  ARLDFIQNMEYKFVEL+S +F  SP++VV+  ITYRYNA+KSRLALM ARL D+N LVK+KNPSLLLQLQR+
Sbjct:   22 NLDFATLDDLDPSLADGFYVYYEREVPFELRSSEGSDLPSEVGALEAIRVKVLLLGDQNNPEALKVELSSESNLFFHYIHQMSPASFKELQEGQKLMVDFAEYPAVLLRMLNHCIKEPHSYLAVFVMHRNGEARLDFIQNMEYKFVELLSCRFVASPDEVVRQHITYRYNAIKSRLALMQARLADVNALVKVKNPSLLLQLQRT 225          
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A1Q9DXU8_SYMMI (SAS-6_N domain-containing protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DXU8_SYMMI)

HSP 1 Score: 267 bits (683), Expect = 5.530e-85
Identity = 128/203 (63.05%), Postives = 165/203 (81.28%), Query Frame = 3
Query:  150 IDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQRS 758
             DFS ++E+DPS ++G + VYDREVPFELRVQ+   GPQ +GTLEAI+ K+L LG+   PQ  R+EL+SE DLFFHF+H  D+ +++ MQEQQKLM+DFPDY  ++I++LN+CIKEPH+ LAV VM  D  ARLDFIQNMEYKFVEL+S  F  SPE+VV+ QIT+RYN++K RL+LM ARL D++ LVK+KNPSLLLQLQ++
Sbjct:   25 FDFSALEEMDPSLSEGHRVVYDREVPFELRVQDAESGPQEVGTLEAIRCKILALGEELSPQHCRIELTSENDLFFHFVHSVDEHSFREMQEQQKLMIDFPDYVAVVIKMLNNCIKEPHSFLAVFVMQRDGHARLDFIQNMEYKFVELLSCDFRASPEEVVRQQITFRYNSVKGRLSLMQARLSDMSALVKVKNPSLLLQLQKA 227          
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Match: A0A061RTL0_9CHLO (SAS-6_N domain-containing protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RTL0_9CHLO)

HSP 1 Score: 268 bits (684), Expect = 6.030e-85
Identity = 132/204 (64.71%), Postives = 165/204 (80.88%), Query Frame = 3
Query:  147 NIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGGPQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQAMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFIQNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINNLVKLKNPSLLLQLQRS 758
            ++DF+ +D+LDPS ADGF   Y+REVPFELR  E +  P  +G LEAI+VKVL LGD   P A+RVELSSE++LFFH+ H     +++ +QE QKLMVDF +YP +L+R+LNHCIKEPH++LAV VMH +  ARLDFIQNMEYKFVEL+S +F  SPE+VV+ QITYRYNA+KSRLALM ARL D+N LVK+KNPSLL+QLQR+
Sbjct:   24 HLDFATLDDLDPSLADGFYVHYEREVPFELRSSEGSDLPSEVGALEAIRVKVLLLGDQGNPSALRVELSSESNLFFHYTHQMSPASFRELQEGQKLMVDFAEYPAVLLRMLNHCIKEPHSYLAVFVMHRNGDARLDFIQNMEYKFVELLSCRFIASPEEVVRQQITYRYNAVKSRLALMQARLADVNALVKVKNPSLLMQLQRT 227          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig590.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YXQ7_9STRA3.910e-10772.73SAS-6_N domain-containing protein n=1 Tax=Tribonem... [more]
D7FKW8_ECTSI7.870e-10776.59SAS-6_N domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6V2Z9A0_HETAK7.960e-9869.23Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1XUL9_9STRA8.720e-9567.62Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2UUP1_9STRA8.900e-9365.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3KUF3_EUPCR1.130e-8562.56Hypothetical protein n=1 Tax=Euplotes crassus TaxI... [more]
A0A7S3PI88_9STRA2.200e-8562.93Hypothetical protein n=2 Tax=Aplanochytrium stocch... [more]
A0A7S1X654_9CHLO4.940e-8564.22Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A1Q9DXU8_SYMMI5.530e-8563.05SAS-6_N domain-containing protein n=3 Tax=Symbiodi... [more]
A0A061RTL0_9CHLO6.030e-8564.71SAS-6_N domain-containing protein n=1 Tax=Tetrasel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig590contigP-wetherbeei_contig590:209..3172 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FKW8
PFAMsSAS-6_N
Model size1194
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue3.32e-110
EggNOG OGs299C8@1|root,2RGE2@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-17_001650.1
DescriptionCentriolar protein SAS N-terminal
Cds size675
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig590.1.3prot_P-wetherbeei_contig590.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig590 319..2763 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186872.4829507-UTR-P-wetherbeei_contig590:208..3181683186872.4829507-UTR-P-wetherbeei_contig590:208..318Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig590 209..318 +
1683186872.5445898-UTR-P-wetherbeei_contig590:2763..31721683186872.5445898-UTR-P-wetherbeei_contig590:2763..3172Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig590 2764..3172 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186872.493586-CDS-P-wetherbeei_contig590:318..5071683186872.493586-CDS-P-wetherbeei_contig590:318..507Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig590 319..507 +
1683186872.5029569-CDS-P-wetherbeei_contig590:960..10711683186872.5029569-CDS-P-wetherbeei_contig590:960..1071Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig590 961..1071 +
1683186872.512848-CDS-P-wetherbeei_contig590:1625..17871683186872.512848-CDS-P-wetherbeei_contig590:1625..1787Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig590 1626..1787 +
1683186872.5229645-CDS-P-wetherbeei_contig590:2262..23551683186872.5229645-CDS-P-wetherbeei_contig590:2262..2355Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig590 2263..2355 +
1683186872.5328605-CDS-P-wetherbeei_contig590:2643..27631683186872.5328605-CDS-P-wetherbeei_contig590:2643..2763Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig590 2644..2763 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig590.1.3

>prot_P-wetherbeei_contig590.1.3 ID=prot_P-wetherbeei_contig590.1.3|Name=mRNA_P-wetherbeei_contig590.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=225bp
MASGGAAEGDVANIDFSGIDELDPSTADGFKCVYDREVPFELRVQETAGG
PQHMGTLEAIKVKVLTLGDAAGPQAVRVELSSEADLFFHFMHVSDDPAYQ
AMQEQQKLMVDFPDYPNMLIRLLNHCIKEPHAHLAVLVMHHDASARLDFI
QNMEYKFVELMSLQFSRSPEDVVQHQITYRYNAMKSRLALMHARLQDINN
LVKLKNPSLLLQLQRSATFGGAGA*
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mRNA from alignment at P-wetherbeei_contig590:209..3172+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig590.1.3 ID=mRNA_P-wetherbeei_contig590.1.3|Name=mRNA_P-wetherbeei_contig590.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2964bp|location=Sequence derived from alignment at P-wetherbeei_contig590:209..3172+ (Phaeothamnion wetherbeei SAG_119_79)
AAAAAATCAAGCGAGTTGTGTGGAGCACAGACGGGATACGCGGACCTGTC CTACCGTACAGAACTCGGAGCCGCGGGACGGCGAAAGCGAATCCTTGAAG CACGCTGCGAATGGCTTCGGGAGGCGCTGCCGAGGGCGATGTCGCCAATA TCGACTTCTCGGGCATCGACGAATTGGACCCGAGCACGGCAGATGGCTTT AAATGCGTGTATGACCGCGAGGTGCCCTTCGAGCTCCGGGTGCAAGAGAC GGCGGGCGGCCCACAGCACATGGGAACCTTAGAAGCCATCAAGGTCAAGG TAAGTGATAGAGATACCACGCTTGGGTTTTGTGAAGCGTTTAAGAGGGTT TCAGAGGGTTACGAGGAGGGAGGTATGGGTGCTGTGAATCGTCTTCACGC TTGTCGGCAGCAGTGGCCTCGTATGTAAGGGTATGCCACAGTTCTTTAAT ATTCAGCTGCTTTACTCTTCCTTCTTACCCCTGAGTGCCACCCAGTTTGG CGGTCATATATCTGGGCGGCTGCCTCGTCTGCACCATAAAAAGATTGCCA TTGTACGCGGTCTTGCACAGAGAGTTGCCCTCTCGACAACTCGAAATGAT AGAGAGTGCAGCGCCACATTTCTTCGTAAAGGTATACCTGCAATTGCTTG AAATCTGCCACAGTGAAAGAGACGGGACTGCGAAACACGCACAGTTGCCG GTTTTTGCGACCCGCTTTCTCCGAAACCCGCTAAAACTCGAATGTGCGGC AGGTGCTCACCTTGGGAGACGCGGCGGGGCCGCAAGCGGTGCGCGTGGAG CTCTCTTCGGAGGCGGACCTCTTTTTCCACTTTATGCATGTCTCGGATGA CCCAGCGTACCAGGCAAGCGAACGCGGCTCGAAAGATTGGAAAATGAAGA ACGGGAAACCGCCGGACCATCTTTGTCACCGCCCGCCATCTGTCTGCCGG TGTTTCCTCGGAACTGCCACCTTGCATCTGTCGCTTGCCACCTCAATAGG CACCTGCAAGATCGGACACCGAACCATAAAAGAAAACCTCTAAAAACTGC GATGCCGCATTTTCCATGAACATGGGCACATTCACCTCGTGCCTGGCTTC CTTTCTTTCAGTTCCCAACCGTATCTGACCCCCATAGATTTCTCTCTCCC CGTGCTCCGGTGACGGCCTCCATTGTGGCCGTGATGGTGATGGCAATGGG CTTCTCTGGCGGCGACGATCGCGATGATGGCTGCTGCGGCGGCGGCGATG GCGGCGGCGATTATGATTGGCAACGGCCTCGCTCTGCGTTCTACCGCAAC CTACCAAGACCACCACCGGTACACATGATTGCAACGGCCGGAACCGGAGA AAATACAAACGACAAATCGTTGACATAATCGCGATGACGACGGTTGGTGG CGGTGATCTGTGAGCAGGCAATGCAGGAGCAGCAGAAGCTGATGGTGGAC TTTCCCGACTACCCCAACATGCTCATCCGGCTGCTGAACCACTGCATCAA GGAGCCGCACGCCCACCTGGCGGTGCTCGTCATGCATCACGACGCCTCGG CGCGCCTCGACTTTATCCAAAACATGGAGGTGAGGCGGTTAGGGTGGGTG GGGATGATTGGATGTGGATTTGAGGATCCGGTTGAAGTTTGTGCTGTTTC TTCTCGGCTTTCGATGAGGTTTTAGCGGTGGTGGCTGGCGTGCTTCGGGT GTTATTTTGATTCGTAAGCCACACGCTTCGATGCAGTGGGGAATCGTTTC CGATGCAAACATGGGCTACTTCTGATGCTAGGCGACGGTTTCAGGCAGCA TTGTGTGGTGCTGCTGGCCCATTTCTTTCGTCCGTTTTACCGCCGCGTTC TCGGCTTTCATCGCTGTCGAAGAGGTAACGGTCATCGACGCCGCTTTGCC GCAATAACCAAAATCCGCAGCCCCTCATTCTCATCTCCTCCCGCCAAACC GTCCCGCCTTGATTACTCTGTCGCGGCGCGTCGATCTCCCAAAACCCACG ATACTTTGGCAATGGCCGTTCTCGCGGCACCGCTTCCGGCGCCTGCAATG GCAGTACAAATTTGTTGAGCTGATGAGTTTGCAGTTCTCGCGGTCCCCCG AGGATGTGGTGCAGCACCAAATCACCTACCGCTACAACGCCATGAAGGTG AGTGGAGGATGAAGTAAAAGGAGAGGGCTAAGTAGAAAGAGAGCTGCACC TTTCGGGTTCTGGGTCTTGCCACATCTAGGCTTGCATCCGTGAGAAGAGC ATGCGGTTCGGCTCAGGAGATGGCTGGCATAGTATGTCATTCGTCAGCTC TTGCCCTCATCACCTCTTTCACGTTTTTGCGCGCCAAAACTGTTATCTCG ACCCTATTCCTTCTTCGAATGGAAATCGTGATCAGCTCTAACCCGAAGAC CATTATCCCCCCTACCACCTCATTTGTACCGACAGTCGCGGTTGGCCCTG ATGCACGCGCGGCTGCAAGACATCAACAACCTCGTCAAGCTAAAAAATCC CTCACTCTTGCTGCAGCTGCAACGCTCCGCGACCTTCGGCGGCGCCGGCG CATGATTCCGGCGGCGGCGGCGCCGGCGCAAGGTTCCGGCAGCCGGCCCG CTCGCCTTGTTGCTGCAGCTGCTGTACTGTCTAGCGGCAACAACGGTCGG TCCAGCCTGTTTCTCTATTGGCGCTCGAACGATACGTTGCGTTGGCGGCG AAGGTACCGCTGGCGGCAGTTGGGTGAAGCGTCGACTGCAGCATTAGCGC AGGCCCCTGCTGTGGGTCGACGATTACGGCTGCACTGAAAATGGCAGATG GGGCTCGTTGCGGCATCCGTCGCGACACCATCACTGCCGCGTGGTTGGGC GGCATATTGTACAGTTGTTGCGGAGTAATTGCATTCCATGACTCTGGCGG CCCTAGGCTGCGATCCTGTGGCCGCACGGCTGTAGCCATACACTGTTTAA AAAACCAGAGAGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig590:209..3172+

>mRNA_P-wetherbeei_contig590.1.3 ID=mRNA_P-wetherbeei_contig590.1.3|Name=mRNA_P-wetherbeei_contig590.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=675bp|location=Sequence derived from alignment at P-wetherbeei_contig590:209..3172+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTTCGGGAGGCGCTGCCGAGGGCGATGTCGCCAATATCGACTTCTC
GGGCATCGACGAATTGGACCCGAGCACGGCAGATGGCTTTAAATGCGTGT
ATGACCGCGAGGTGCCCTTCGAGCTCCGGGTGCAAGAGACGGCGGGCGGC
CCACAGCACATGGGAACCTTAGAAGCCATCAAGGTCAAGGTGCTCACCTT
GGGAGACGCGGCGGGGCCGCAAGCGGTGCGCGTGGAGCTCTCTTCGGAGG
CGGACCTCTTTTTCCACTTTATGCATGTCTCGGATGACCCAGCGTACCAG
GCAATGCAGGAGCAGCAGAAGCTGATGGTGGACTTTCCCGACTACCCCAA
CATGCTCATCCGGCTGCTGAACCACTGCATCAAGGAGCCGCACGCCCACC
TGGCGGTGCTCGTCATGCATCACGACGCCTCGGCGCGCCTCGACTTTATC
CAAAACATGGAGTACAAATTTGTTGAGCTGATGAGTTTGCAGTTCTCGCG
GTCCCCCGAGGATGTGGTGCAGCACCAAATCACCTACCGCTACAACGCCA
TGAAGTCGCGGTTGGCCCTGATGCACGCGCGGCTGCAAGACATCAACAAC
CTCGTCAAGCTAAAAAATCCCTCACTCTTGCTGCAGCTGCAACGCTCCGC
GACCTTCGGCGGCGCCGGCGCATGA
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