mRNA_P-wetherbeei_contig58980.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58980.1.1 vs. uniprot
Match: A0A5S9NAS9_9HYPH (DNA gyrase inhibitor YacG n=2 Tax=unclassified Starkeya TaxID=2615126 RepID=A0A5S9NAS9_9HYPH) HSP 1 Score: 90.1 bits (222), Expect = 2.780e-22 Identity = 41/58 (70.69%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 31 PCPICGKPAAEGALPFCSRRCKDVDLHRWFSGKYAVPVVEDDDEDGTKGEDMPSLAPK 204
PCPICGKPA E PFCS RC DVDLHRW +G YA+PV EDDDEDG + PSLAPK
Sbjct: 14 PCPICGKPAVEQYKPFCSSRCADVDLHRWLTGAYAIPVTEDDDEDGEE----PSLAPK 67
BLAST of mRNA_P-wetherbeei_contig58980.1.1 vs. uniprot
Match: UPI001FF5A93D (DNA gyrase inhibitor YacG n=1 Tax=Starkeya koreensis TaxID=266121 RepID=UPI001FF5A93D) HSP 1 Score: 89.4 bits (220), Expect = 5.450e-22 Identity = 40/58 (68.97%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 31 PCPICGKPAAEGALPFCSRRCKDVDLHRWFSGKYAVPVVEDDDEDGTKGEDMPSLAPK 204
PCPICGKP AE PFCS RC D+DLHRW +G YA+PV EDDDEDG + PSLAPK
Sbjct: 13 PCPICGKPPAEKYKPFCSSRCADIDLHRWLTGAYAIPVTEDDDEDGEE----PSLAPK 66
BLAST of mRNA_P-wetherbeei_contig58980.1.1 vs. uniprot
Match: A0A858X1Y1_9HYPH (DNA gyrase inhibitor YacG n=1 Tax=Starkeya sp. ORNL1 TaxID=2709380 RepID=A0A858X1Y1_9HYPH) HSP 1 Score: 88.6 bits (218), Expect = 1.070e-21 Identity = 40/58 (68.97%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 31 PCPICGKPAAEGALPFCSRRCKDVDLHRWFSGKYAVPVVEDDDEDGTKGEDMPSLAPK 204
PCPICGKPA E PFCS RC DVDLHRW SG YA+P VE+DDEDG D P LAP+
Sbjct: 12 PCPICGKPAVEKYRPFCSSRCADVDLHRWLSGSYAIPAVEEDDEDG----DTPPLAPE 65
BLAST of mRNA_P-wetherbeei_contig58980.1.1 vs. uniprot
Match: D7A0V2_STAND (DNA gyrase inhibitor YacG n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / JCM 20403 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIMB 10456) TaxID=639283 RepID=D7A0V2_STAND) HSP 1 Score: 86.7 bits (213), Expect = 6.710e-21 Identity = 39/57 (68.42%), Postives = 43/57 (75.44%), Query Frame = 1
Query: 34 CPICGKPAAEGALPFCSRRCKDVDLHRWFSGKYAVPVVEDDDEDGTKGEDMPSLAPK 204
CPICGKP+ E PFCS RC DVDLHRW +G YA+PV EDDDEDG + PSLAPK
Sbjct: 16 CPICGKPSVEKYKPFCSSRCADVDLHRWLTGAYAIPVTEDDDEDGEE----PSLAPK 68
BLAST of mRNA_P-wetherbeei_contig58980.1.1 vs. uniprot
Match: A0A537Q7M0_9PROT (DNA gyrase inhibitor YacG n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537Q7M0_9PROT) HSP 1 Score: 86.3 bits (212), Expect = 7.530e-21 Identity = 39/61 (63.93%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 1 MSDPVVPRFAPCPICGKPAAEGALPFCSRRCKDVDLHRWFSGKYAVPVVEDDDEDGTKGED 183
M DP+ P CPICGKPAAE PFCS+RC DVDLHRWFSG+YAVP E + E+G + ED
Sbjct: 1 MPDPI-PGTRKCPICGKPAAERFRPFCSKRCADVDLHRWFSGRYAVPAAEQEAEEGARPED 60
BLAST of mRNA_P-wetherbeei_contig58980.1.1 vs. uniprot
Match: UPI001BD09C56 (DNA gyrase inhibitor YacG n=1 Tax=Ancylobacter sp. VKM B-3255 TaxID=2836179 RepID=UPI001BD09C56) HSP 1 Score: 86.3 bits (212), Expect = 8.360e-21 Identity = 39/61 (63.93%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 19 PRFAPCPICGKPAAEGALPFCSRRCKDVDLHRWFSGKYAVPVVEDDDEDGTKGEDMPSLAP 201
P PCPICGKP E PFCS RC DVDLHRW +G YA+PV E+DDEDG + PSLAP
Sbjct: 6 PAAKPCPICGKPMVEKYKPFCSSRCADVDLHRWLTGAYAIPVTEEDDEDGEE----PSLAP 62
BLAST of mRNA_P-wetherbeei_contig58980.1.1 vs. uniprot
Match: A0A371WX73_9HYPH (DNA gyrase inhibitor YacG n=1 Tax=Methylovirgula sp. 4M-Z18 TaxID=2293567 RepID=A0A371WX73_9HYPH) HSP 1 Score: 85.9 bits (211), Expect = 1.100e-20 Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 1
Query: 22 RFAPCPICGKPAAEGALPFCSRRCKDVDLHRWFSGKYAVPVVEDDDEDGTKGE 180
+ A CPICGKPA + PFCS+RC DVDL+RWFSG YA+PV ED DEDG +GE
Sbjct: 11 KIATCPICGKPAVKEFRPFCSKRCADVDLNRWFSGTYAIPVTEDSDEDGEEGE 63
BLAST of mRNA_P-wetherbeei_contig58980.1.1 vs. uniprot
Match: A0A1Q4DHE5_9HYPH (DNA gyrase inhibitor YacG n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DHE5_9HYPH) HSP 1 Score: 85.9 bits (211), Expect = 1.130e-20 Identity = 40/66 (60.61%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 10 PVVPRFAPCPICGKPAAEGALPFCSRRCKDVDLHRWFSGKYAVPVVEDDDEDGTKGEDMPSLAPKD 207
P + APCPIC +PA E PFCS+RC+DVDLHRW SG YAVPV EDDDEDG + P +P+D
Sbjct: 2 PSLAPAAPCPICRRPAEEAFKPFCSKRCRDVDLHRWMSGVYAVPVKEDDDEDG---DGAPRTSPED 64
BLAST of mRNA_P-wetherbeei_contig58980.1.1 vs. uniprot
Match: A0A1G4RT25_9HYPH (DNA gyrase inhibitor YacG n=4 Tax=Ancylobacter TaxID=99 RepID=A0A1G4RT25_9HYPH) HSP 1 Score: 85.1 bits (209), Expect = 2.590e-20 Identity = 38/58 (65.52%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 31 PCPICGKPAAEGALPFCSRRCKDVDLHRWFSGKYAVPVVEDDDEDGTKGEDMPSLAPK 204
PCPICGKP E PFCS RC D+DLHRW +G YA+PV E+DDEDG + PSLAPK
Sbjct: 13 PCPICGKPMVEKYRPFCSARCADLDLHRWLTGAYAIPVTENDDEDGEE----PSLAPK 66
BLAST of mRNA_P-wetherbeei_contig58980.1.1 vs. uniprot
Match: UPI001D0F3CD0 (DNA gyrase inhibitor YacG n=1 Tax=Klebsiella pneumoniae TaxID=573 RepID=UPI001D0F3CD0) HSP 1 Score: 85.1 bits (209), Expect = 3.040e-20 Identity = 37/57 (64.91%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 1 MSDPVVPRFAPCPICGKPAAEGALPFCSRRCKDVDLHRWFSGKYAVPVV-EDDDEDG 168
M+ P PR CPICGKPA E PFCS RCKD+DLHRW SG YA+P +DDDEDG
Sbjct: 16 MAKPATPRLKKCPICGKPAQEATRPFCSDRCKDLDLHRWLSGAYAIPASGDDDDEDG 72 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58980.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58980.1.1 >prot_P-wetherbeei_contig58980.1.1 ID=prot_P-wetherbeei_contig58980.1.1|Name=mRNA_P-wetherbeei_contig58980.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=72bp MSDPVVPRFAPCPICGKPAAEGALPFCSRRCKDVDLHRWFSGKYAVPVVEback to top mRNA from alignment at P-wetherbeei_contig58980:62..277+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58980.1.1 ID=mRNA_P-wetherbeei_contig58980.1.1|Name=mRNA_P-wetherbeei_contig58980.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=216bp|location=Sequence derived from alignment at P-wetherbeei_contig58980:62..277+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58980:62..277+ >mRNA_P-wetherbeei_contig58980.1.1 ID=mRNA_P-wetherbeei_contig58980.1.1|Name=mRNA_P-wetherbeei_contig58980.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=216bp|location=Sequence derived from alignment at P-wetherbeei_contig58980:62..277+ (Phaeothamnion wetherbeei SAG_119_79)back to top |