mRNA_P-wetherbeei_contig58861.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58861.1.1
Unique NamemRNA_P-wetherbeei_contig58861.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: A0A6J4S8D9_9ACTN (Uncharacterized protein n=1 Tax=uncultured Rubrobacteraceae bacterium TaxID=349277 RepID=A0A6J4S8D9_9ACTN)

HSP 1 Score: 119 bits (298), Expect = 9.900e-29
Identity = 59/123 (47.97%), Postives = 80/123 (65.04%), Query Frame = 1
Query:   13 FAEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITIN-DLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
            FA+  +R++ S P    STLLHG VHGVP+GG +    D RP   A  + +G H DDV A++A++G GITDP +RR  ER++  F+GQ L+ L T +G+VD+EE EH A F   SGG   +DR
Sbjct:  334 FADVAKRVVASEPLFPRSTLLHGCVHGVPVGGEVDPGLDRRPAADALAVVLGHHDDDVVASVAADGFGITDPEQRRAAERLVGGFSGQSLDRLATPDGLVDIEEQEHGAAFTGLSGGTSGSDR 456          
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: A0A7X7PJW8_9BACT (Uncharacterized protein n=1 Tax=Candidatus Cloacimonetes bacterium TaxID=2030808 RepID=A0A7X7PJW8_9BACT)

HSP 1 Score: 104 bits (260), Expect = 1.310e-23
Identity = 54/125 (43.20%), Postives = 77/125 (61.60%), Query Frame = 1
Query:    4 RSAFAEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
            RS F +    ++ ++P+    TLLHGVVHGVP+   + + D RP+P+    A+G H  D+ + LA+ G+G TD   RR  ER+L AFTGQ L  LG+ +G VD++E+EH+  FE   GG    DR
Sbjct:  327 RSVFVDQVSSVVAAKPKWPRMTLLHGVVHGVPVRESVKV-DQRPDPRQVDGALGRHLQDLVSTLAAPGLGATDADARRALERMLVAFTGQLLPNLGSDDGAVDIDEHEHATAFEGLPGGKAGVDR 450          
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: A0A257CIB3_9BURK (Uncharacterized protein n=1 Tax=Burkholderiales bacterium PBB6 TaxID=2015568 RepID=A0A257CIB3_9BURK)

HSP 1 Score: 104 bits (259), Expect = 1.800e-23
Identity = 56/108 (51.85%), Postives = 77/108 (71.30%), Query Frame = 1
Query:   55 HLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
            HL S+LLHGVV GVP+GG++   DLRP  ++  +A+G H DDV AALA+ G     P ++R TER+L AFT QR+N+LG+A+G+V++EE EH+A F S+  G    DR
Sbjct:  385 HLRSSLLHGVVVGVPVGGKLW-GDLRPAAESLSVAMGQHDDDVLAALAARG---ATPNQQRATERLLAAFTSQRVNQLGSADGLVNLEEGEHAAAFFSQPSGSAGNDR 488          
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: UPI001D2E93F7 (hypothetical protein n=1 Tax=Arthrobacter sp. Bi26 TaxID=2822350 RepID=UPI001D2E93F7)

HSP 1 Score: 99.0 bits (245), Expect = 1.380e-21
Identity = 57/125 (45.60%), Postives = 78/125 (62.40%), Query Frame = 1
Query:    7 SAFAEGG-RRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
            SAFA     R   + P  L S+LLHG V GVP+ G + + D RP+  A  +A+G H DDV AA A+ G      ++RRDTER+L AFT Q++  L   +G+V++EE+EH+AGF +  GG   TDR
Sbjct:  344 SAFASAAVGRFHPAIPWGLRSSLLHGSVFGVPVSGPVLV-DHRPDSTALAVALGEHDDDVVAAFAAAGK---PESQRRDTERLLAAFTAQKVGRLAAPDGIVEIEEHEHAAGFSALPGGISGTDR 464          
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: UPI001AE05D30 (hypothetical protein n=1 Tax=Rhizobacter sp. AJA081-3 TaxID=2753607 RepID=UPI001AE05D30)

HSP 1 Score: 97.8 bits (242), Expect = 3.510e-21
Identity = 55/124 (44.35%), Postives = 75/124 (60.48%), Query Frame = 1
Query:    7 SAFAEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
            SAFA        + P  L S+LLHG ++GVP+ G  T+ D RP+     +A+GLH DD+ AA A+       P +RR TER+L AFT Q++N LG A+G V++EE+EH+  F S   G   TDR
Sbjct:  353 SAFASEAIERYVAPPWQLRSSLLHGAIYGVPVSGSPTL-DRRPDAGGVSVALGLHDDDLLAAFAAAQ---ATPDQRRATERLLAAFTAQKVNRLGAADGAVELEEHEHAVAFASLPAGIAGTDR 472          
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: T1X915_VARPD (Uncharacterized protein n=3 Tax=Variovorax TaxID=34072 RepID=T1X915_VARPD)

HSP 1 Score: 97.8 bits (242), Expect = 3.510e-21
Identity = 53/121 (43.80%), Postives = 79/121 (65.29%), Query Frame = 1
Query:   16 AEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
            A+ GRR + + P HL S+LLHG ++GVP+ G   + D RP+     +AIG H D++ AAL++       P +RR +ER+L AFT Q++N LG+ +G+V++EE+EH+A F S  GG    DR
Sbjct:  354 ADAGRRFV-APPWHLRSSLLHGAIYGVPVAGTAPV-DRRPSAGTLRVAIGQHEDEMLAALSAAPQ--ATPEQRRASERLLTAFTAQKINRLGSPDGLVELEEHEHAAAFTSVPGGIDGDDR 470          
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: A0A7V9IHG1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9IHG1_9ACTN)

HSP 1 Score: 95.9 bits (237), Expect = 1.660e-20
Identity = 57/126 (45.24%), Postives = 73/126 (57.94%), Query Frame = 1
Query:    1 ARSAFAEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
            A SAFA        + P HL S LLHG V+GVP+     + D RP   A  +A+G H  DV AALA+  +  T   +RRDTER+L AF  Q++N LG+ +G V++EE EHS  F S   G   TDR
Sbjct:  337 ASSAFAADAITHFVTTPWHLRSCLLHGAVYGVPVQTAPAV-DRRPATDAVRVALGEHDGDVLAALAT--VADTPEERRRDTERLLEAFAAQKINRLGSPDGTVEIEELEHSRAFASLPAGSAGTDR 459          
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: A0A4Q5WL13_9BURK (Uncharacterized protein (Fragment) n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4Q5WL13_9BURK)

HSP 1 Score: 92.8 bits (229), Expect = 1.900e-19
Identity = 51/126 (40.48%), Postives = 76/126 (60.32%), Query Frame = 1
Query:    1 ARSAFAEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
            A S FA    R   + P  L S+LLHG ++GVP+ G   + D RP+     +A G H D++ AAL++       P +RR +ER+L AFT Q+++ LG+ +G+V++EE+EH+AGF S   G    DR
Sbjct:  360 AASTFAADAARRFVAPPWQLRSSLLHGAIYGVPVAGE-PLQDRRPDAGGLAVAFGQHEDEMLAALSAAPQ--ATPEQRRASERLLTAFTAQKIDRLGSPDGLVELEEHEHAAGFSSVPAGIDGDDR 482          
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: A0A1I0PD53_9RHOB (Uncharacterized protein n=3 Tax=Aliiroseovarius TaxID=1658781 RepID=A0A1I0PD53_9RHOB)

HSP 1 Score: 92.0 bits (227), Expect = 3.690e-19
Identity = 47/115 (40.87%), Postives = 70/115 (60.87%), Query Frame = 1
Query:   13 FAEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSG 357
            F   G R +   P+H++STLL+G+VHGVP+ G +   D RP+P+    A+G   +D  AAL +  M   D   R +TER++ A T  ++ +LG  NG V++EE EH+A FE+  G
Sbjct:  316 FLPEGGRFVAVEPKHIYSTLLNGIVHGVPVTGPVPA-DQRPDPRRVRAALGPQVEDSIAALTAAAMEGDDLDARAETERLIAALTNDQVAKLGERNGAVEIEEREHAARFEAERG 429          
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Match: UPI0013920DFA (hypothetical protein n=1 Tax=Pseudoxanthomonas kaohsiungensis TaxID=283923 RepID=UPI0013920DFA)

HSP 1 Score: 90.9 bits (224), Expect = 9.380e-19
Identity = 51/126 (40.48%), Postives = 73/126 (57.94%), Query Frame = 1
Query:    1 ARSAFAEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKATGLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTANGVVDVEEYEHSAGFESRSGGPGATDR 378
            A S FA        +    L S+LLHGV+HGVP+ G   + D RP+ ++  +++GL  DD+ AALA        P +RR  +R+L AFT Q+++ LG A+G V++EE+EH A F S   G    DR
Sbjct:  356 AASIFANDAVERFVAPAWQLRSSLLHGVIHGVPVRGAAAL-DRRPDSRSLEVSLGLQEDDLLAALAVPAS--ASPEERRSADRLLTAFTAQKVDRLGAADGAVELEEHEHGAAFASLPAGSAGNDR 478          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58861.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6J4S8D9_9ACTN9.900e-2947.97Uncharacterized protein n=1 Tax=uncultured Rubroba... [more]
A0A7X7PJW8_9BACT1.310e-2343.20Uncharacterized protein n=1 Tax=Candidatus Cloacim... [more]
A0A257CIB3_9BURK1.800e-2351.85Uncharacterized protein n=1 Tax=Burkholderiales ba... [more]
UPI001D2E93F71.380e-2145.60hypothetical protein n=1 Tax=Arthrobacter sp. Bi26... [more]
UPI001AE05D303.510e-2144.35hypothetical protein n=1 Tax=Rhizobacter sp. AJA08... [more]
T1X915_VARPD3.510e-2143.80Uncharacterized protein n=3 Tax=Variovorax TaxID=3... [more]
A0A7V9IHG1_9ACTN1.660e-2045.24Uncharacterized protein n=1 Tax=Acidimicrobiia bac... [more]
A0A4Q5WL13_9BURK1.900e-1940.48Uncharacterized protein (Fragment) n=1 Tax=Comamon... [more]
A0A1I0PD53_9RHOB3.690e-1940.87Uncharacterized protein n=3 Tax=Aliiroseovarius Ta... [more]
UPI0013920DFA9.380e-1940.48hypothetical protein n=1 Tax=Pseudoxanthomonas kao... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58861contigP-wetherbeei_contig58861:107..484 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1214101.BN159_7443
Model size378
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categorymitochondrion
Exons1
Evalue1.94e-16
EggNOG OGsCOG3550@1|root,COG3550@2|Bacteria,2I5JF@201174|Actinobacteria
Descriptionpeptidyl-serine autophosphorylation
Cds size378
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186870.4754722-CDS-P-wetherbeei_contig58861:106..4841683186870.4754722-CDS-P-wetherbeei_contig58861:106..484Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58861 107..484 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58861.1.1prot_P-wetherbeei_contig58861.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58861 107..484 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58861.1.1

>prot_P-wetherbeei_contig58861.1.1 ID=prot_P-wetherbeei_contig58861.1.1|Name=mRNA_P-wetherbeei_contig58861.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=126bp
ARSAFAEGGRRIIKSRPRHLFSTLLHGVVHGVPMGGRITINDLRPNPKAT
GLAIGLHGDDVAAALASEGMGITDPAKRRDTERILNAFTGQRLNELGTAN
GVVDVEEYEHSAGFESRSGGPGATDR
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mRNA from alignment at P-wetherbeei_contig58861:107..484+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58861.1.1 ID=mRNA_P-wetherbeei_contig58861.1.1|Name=mRNA_P-wetherbeei_contig58861.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig58861:107..484+ (Phaeothamnion wetherbeei SAG_119_79)
GCGCGTTCGGCCTTCGCCGAGGGCGGCCGCCGCATCATCAAGAGCCGGCC GCGGCATTTGTTCTCCACCCTGCTGCACGGCGTGGTGCATGGCGTGCCGA TGGGCGGCCGCATCACCATCAACGATCTGCGGCCCAATCCGAAAGCAACC GGTCTTGCCATCGGCCTGCACGGCGATGACGTGGCCGCGGCGCTCGCCAG CGAGGGCATGGGCATCACCGATCCGGCCAAGCGCCGCGACACCGAGCGCA TCCTGAATGCCTTCACCGGCCAGCGCCTGAACGAGCTCGGCACCGCCAAC GGCGTGGTCGATGTCGAGGAATATGAGCATTCCGCCGGATTCGAATCGCG TTCCGGCGGACCCGGCGCCACCGACCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig58861:107..484+

>mRNA_P-wetherbeei_contig58861.1.1 ID=mRNA_P-wetherbeei_contig58861.1.1|Name=mRNA_P-wetherbeei_contig58861.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig58861:107..484+ (Phaeothamnion wetherbeei SAG_119_79)
GCGCGTTCGGCCTTCGCCGAGGGCGGCCGCCGCATCATCAAGAGCCGGCC
GCGGCATTTGTTCTCCACCCTGCTGCACGGCGTGGTGCATGGCGTGCCGA
TGGGCGGCCGCATCACCATCAACGATCTGCGGCCCAATCCGAAAGCAACC
GGTCTTGCCATCGGCCTGCACGGCGATGACGTGGCCGCGGCGCTCGCCAG
CGAGGGCATGGGCATCACCGATCCGGCCAAGCGCCGCGACACCGAGCGCA
TCCTGAATGCCTTCACCGGCCAGCGCCTGAACGAGCTCGGCACCGCCAAC
GGCGTGGTCGATGTCGAGGAATATGAGCATTCCGCCGGATTCGAATCGCG
TTCCGGCGGACCCGGCGCCACCGACCGC
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