mRNA_P-wetherbeei_contig58832.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58832.1.1 vs. uniprot
Match: A0A7C4V9J5_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C4V9J5_9PROT) HSP 1 Score: 167 bits (422), Expect = 1.050e-50 Identity = 79/122 (64.75%), Postives = 98/122 (80.33%), Query Frame = 3
Query: 60 VAADPA-VPELRGTWKGESHSVVM-GAGPHHPDARTAEPRFTAVPFTLVIDKQDGRRFFGTFSSSQHSETVVAVLSRGGTIFMADDDG*NVGTMLAPDRMELCYLHSTSAKRIASCTELTRQ 419
VAA PA P+LRGTWKGES S+V+ G PHHP + A PR ++VPFTLVID QDGRRF GTFSS++H E V+AV+SR G I+MADDDG +GTMLAP+RMELCY+ ++ R+ASCTE+T+Q
Sbjct: 18 VAAQPASFPDLRGTWKGESESIVLPGGNPHHPGGKPAGPRMSSVPFTLVIDNQDGRRFSGTFSSARHKEAVIAVISRNGAIYMADDDGTTIGTMLAPNRMELCYMKVGASGRVASCTEMTKQ 139
BLAST of mRNA_P-wetherbeei_contig58832.1.1 vs. uniprot
Match: A0A537NIV9_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NIV9_9PROT) HSP 1 Score: 159 bits (402), Expect = 1.120e-47 Identity = 75/120 (62.50%), Postives = 93/120 (77.50%), Query Frame = 3
Query: 63 AADPAVPELRGTWKGESHSVVMGAG-PHHPDARTAEPRFTAVPFTLVIDKQDGRRFFGTFSSSQHSETVVAVLSRGGTIFMADDDG*NVGTMLAPDRMELCYLHSTSAKRIASCTELTRQ 419
AA A+P+L GTWKGES S+V+G G PHH T EP+ +VPFTL +DKQDGRRF GTFSS + +E V+AV+SR G IF+ADD+G GT+LAP+RMELCYLH ++ RIASC ELT+Q
Sbjct: 19 AAQTAIPDLLGTWKGESESIVLGGGNPHHGSTETNEPQLRSVPFTLTVDKQDGRRFSGTFSSPRSTEKVLAVISRSGVIFLADDEGYTNGTLLAPNRMELCYLHVSAISRIASCAELTKQ 138
BLAST of mRNA_P-wetherbeei_contig58832.1.1 vs. uniprot
Match: A0A537TRX5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537TRX5_9PROT) HSP 1 Score: 153 bits (386), Expect = 3.120e-45 Identity = 71/120 (59.17%), Postives = 92/120 (76.67%), Query Frame = 3
Query: 66 ADPAVPELRGTWKGESHSVVMGAG-PHHPDARTAEPRFTAVPFTLVIDKQDGRRFFGTFSSSQHSETVVAVLSRGGTIFMADDDG*NVGTMLAPDRMELCYLHSTSAKRIASCTELTRQK 422
A A+P+LRGTWKG S S+++GAG PHH A + +PR +V FT+ IDKQDGRRF GTFSS + ++ VAV+SR TI + DDDG VGT+LAP+RME CY+H + A R+ASCTELT+Q+
Sbjct: 20 AQTAIPDLRGTWKGNSESIILGAGNPHHAAAPSDQPRLNSVAFTVTIDKQDGRRFSGTFSSPRANDKFVAVISRNNTILLVDDDGYTVGTILAPNRMEWCYMHLSQATRVASCTELTKQQ 139
BLAST of mRNA_P-wetherbeei_contig58832.1.1 vs. uniprot
Match: A0A537TBF5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537TBF5_9PROT) HSP 1 Score: 151 bits (382), Expect = 1.270e-44 Identity = 69/120 (57.50%), Postives = 92/120 (76.67%), Query Frame = 3
Query: 63 AADPAVPELRGTWKGESHSVVMGAG-PHHPDARTAEPRFTAVPFTLVIDKQDGRRFFGTFSSSQHSETVVAVLSRGGTIFMADDDG*NVGTMLAPDRMELCYLHSTSAKRIASCTELTRQ 419
AA A+P++RGTWKGES S+++G G PHH + EPR VPFT+ IDKQDGRRF GTFSS++ ++ VAV+SR TI + DDDG VG++LAP+R+ELCY+H + A R+ASC E+T+Q
Sbjct: 19 AAQSAIPDVRGTWKGESESIILGPGNPHHVAPSSTEPRLDNVPFTMTIDKQDGRRFSGTFSSARANDKFVAVISRNNTILLVDDDGYTVGSILAPNRIELCYMHLSQATRLASCAEMTKQ 138
BLAST of mRNA_P-wetherbeei_contig58832.1.1 vs. uniprot
Match: A0A537RNT7_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RNT7_9PROT) HSP 1 Score: 136 bits (343), Expect = 7.510e-38 Identity = 64/111 (57.66%), Postives = 83/111 (74.77%), Query Frame = 3
Query: 66 ADPAVPELRGTWKGESHSVVMGAG-PHHPDARTAEPRFTAVPFTLVIDKQDGRRFFGTFSSSQHSETVVAVLSRGGTIFMADDDG*NVGTMLAPDRMELCYLHSTSAKRIA 395
A A+P+LRGTWKG S S+++GAG PHH A + +PR +V FT+ IDKQDGRRF GTFSSS+ ++ VAV+SR TI + DDDG VGT+LAP+RME CY+H + A +A
Sbjct: 20 AQTAIPDLRGTWKGNSESIILGAGNPHHAAAPSDQPRLNSVAFTVTIDKQDGRRFSGTFSSSRGNDKFVAVISRNNTILLVDDDGYTVGTILAPNRMEWCYMHLSQAAVVA 130
BLAST of mRNA_P-wetherbeei_contig58832.1.1 vs. uniprot
Match: K6GSX7_9DELT (Uncharacterized protein n=1 Tax=Solidesulfovibrio magneticus str. Maddingley MBC34 TaxID=1206767 RepID=K6GSX7_9DELT) HSP 1 Score: 96.3 bits (238), Expect = 1.440e-22 Identity = 54/118 (45.76%), Postives = 75/118 (63.56%), Query Frame = 3
Query: 69 DPAVPELRGTWKGESHSVVMGAGPHHPDARTAEPRFTAVPFTLVIDKQDGRRFFGTFSSSQHSETVVAVLSRGGTIFMADDDG*NVGTMLAPDRMELCYLHSTSAKRIASCTELTRQK 422
+ ++P L G WKG S SV MGA H DA A P F V +TL IDKQ+GR F+GT +SS+ ETVV V+ G + MADDDG +G + +P+R+ + YL + A ++AS T R++
Sbjct: 32 EKSIPNLVGVWKGTSDSVAMGAL-GHVDAAAA-PTFLHVDWTLTIDKQEGRAFYGTKASSRAKETVVGVVD-GAQVTMADDDGTYLGKLTSPNRLIVRYLEAGKASKVASITLYVRER 146
BLAST of mRNA_P-wetherbeei_contig58832.1.1 vs. uniprot
Match: A0A0B1U195_9DELT (Uncharacterized protein n=2 Tax=unclassified Desulfovibrio TaxID=2593640 RepID=A0A0B1U195_9DELT) HSP 1 Score: 93.6 bits (231), Expect = 1.620e-21 Identity = 49/117 (41.88%), Postives = 72/117 (61.54%), Query Frame = 3
Query: 69 DPAVPELRGTWKGESHSVVMGAGPHHPDARTAEPRFTAVPFTLVIDKQDGRRFFGTFSSSQHSETVVAVLSRGGTIFMADDDG*NVGTMLAPDRMELCYLHSTSAKRIASCTELTRQ 419
+ ++P++ G WKG S SV MG H T P+F + +TL IDKQ+GR FFGT +S++ ETVV V+ G T++MADDDG VG + + +R+ L Y+ ++AS T R+
Sbjct: 32 EKSIPDVTGVWKGTSDSVAMGRLGHTDPTTT--PKFLHLDWTLTIDKQEGRAFFGTKASARGKETVVGVID-GATLYMADDDGAFVGKLTSKNRLVLKYMEPGKESKVASITLYVRE 145
BLAST of mRNA_P-wetherbeei_contig58832.1.1 vs. uniprot
Match: A0A1Q7BWY0_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BWY0_9PROT) HSP 1 Score: 89.4 bits (220), Expect = 6.520e-21 Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 3
Query: 195 LVIDKQDGRRFFGTFSSSQHSETVVAVLSRGGTIFMADDDG*NVGTMLAPDRMELCYLHSTSAKRI 392
+ +DKQDGRRF GTFSSS+ ++ V V+SR TIF+ DDDG VGT+LAP+RME CY+H + A R+
Sbjct: 1 MTVDKQDGRRFSGTFSSSRGNDKFVGVISRNNTIFLVDDDGYTVGTVLAPNRMEWCYMHLSQATRV 66
BLAST of mRNA_P-wetherbeei_contig58832.1.1 vs. uniprot
Match: A0A6L9MJX3_9HYPH (Uncharacterized protein n=1 Tax=Aurantimonas aggregata TaxID=2047720 RepID=A0A6L9MJX3_9HYPH) HSP 1 Score: 91.3 bits (225), Expect = 8.120e-21 Identity = 45/111 (40.54%), Postives = 69/111 (62.16%), Query Frame = 3
Query: 75 AVPELRGTWKGESHSVVMGAGPHHPDARTAEPRFTAVPFTLVIDKQDGRRFFGTFSSSQHSETVVAVLSRGGTIFMA-DDDG*NVGTMLAPDRMELCYLHSTSAKRIASCT 404
A+P+L+G W G S ++++G+ HH D A PR + + FT+ ++ QDGRRF+GTFSS++ SET + V+ G +A D DG G + D MEL Y H+ + +A+ T
Sbjct: 28 ALPDLKGNWVGTSETILLGSAAHHEDGEAA-PRLSEMEFTMAVEGQDGRRFWGTFSSAKSSETFMGVIGFDGKSIVARDTDGHIDGALADDDTMELIYSHTGDSTVVAATT 137
BLAST of mRNA_P-wetherbeei_contig58832.1.1 vs. uniprot
Match: E1JWC1_SOLFR (Uncharacterized protein n=1 Tax=Solidesulfovibrio fructosivorans JJ] TaxID=596151 RepID=E1JWC1_SOLFR) HSP 1 Score: 91.3 bits (225), Expect = 1.190e-20 Identity = 47/115 (40.87%), Postives = 68/115 (59.13%), Query Frame = 3
Query: 75 AVPELRGTWKGESHSVVMGAGPHHPDARTAEPRFTAVPFTLVIDKQDGRRFFGTFSSSQHSETVVAVLSRGGTIFMADDDG*NVGTMLAPDRMELCYLHSTSAKRIASCTELTRQ 419
AVP++ G WKG S +V MG H DA P+F +TL IDKQ+GR F+GT +S++ ETVV V+ ++MADDDG +G + + M + Y+ T ++AS T R+
Sbjct: 34 AVPDVTGVWKGTSDTVAMGKL-GHADA-VHSPQFLHADWTLTIDKQEGRAFYGTKASARAKETVVGVIDGAAKLYMADDDGVYIGKLTGKNTMIITYVEGTKESKVASITHYRRE 146 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58832.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58832.1.1 >prot_P-wetherbeei_contig58832.1.1 ID=prot_P-wetherbeei_contig58832.1.1|Name=mRNA_P-wetherbeei_contig58832.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=65bp MGAGPHHPDARTAEPRFTAVPFTLVIDKQDGRRFFGTFSSSQHSETVVAVback to top mRNA from alignment at P-wetherbeei_contig58832:12..433+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58832.1.1 ID=mRNA_P-wetherbeei_contig58832.1.1|Name=mRNA_P-wetherbeei_contig58832.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=422bp|location=Sequence derived from alignment at P-wetherbeei_contig58832:12..433+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58832:12..433+ >mRNA_P-wetherbeei_contig58832.1.1 ID=mRNA_P-wetherbeei_contig58832.1.1|Name=mRNA_P-wetherbeei_contig58832.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=195bp|location=Sequence derived from alignment at P-wetherbeei_contig58832:12..433+ (Phaeothamnion wetherbeei SAG_119_79)back to top |