mRNA_P-wetherbeei_contig58815.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58815.1.1
Unique NamemRNA_P-wetherbeei_contig58815.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig58815.1.1 vs. uniprot
Match: A0A7W0PMM4_9CHLR (Guanylate kinase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0PMM4_9CHLR)

HSP 1 Score: 167 bits (424), Expect = 1.530e-49
Identity = 89/144 (61.81%), Postives = 106/144 (73.61%), Query Frame = 1
Query:    1 YLFMSKEEFVDGIEREQFIEHALVYDNHYGVPRTPIEDGLASGQHVIIKVDVKGAATLRRCIAGSTSIFLAPERMSELLGRLRSRKTDDPDVLLKRFRTASEELKRAEEFDYVVFNEAGKLDEAIYRIRSIIQTEQSRIHQPEI 432
            Y F+ + +F   IE   F EHALVYDN YGVP+ PI +GLA+GQHVIIKVDVKGAATLRR I  ++SIFL PE M  L  RL  RK++  +V+ KRFRTA EEL+R  EFDYVVFNEA KLD+A+  I +II  EQ R+ QPEI
Sbjct:   91 YRFLDRADFERQIEAGDFAEHALVYDNLYGVPKRPIVEGLATGQHVIIKVDVKGAATLRRLIPSASSIFLLPESMESLWQRLHRRKSEPLEVIKKRFRTACEELERVGEFDYVVFNEADKLDKALKHIVTIIDAEQRRVVQPEI 234          
BLAST of mRNA_P-wetherbeei_contig58815.1.1 vs. uniprot
Match: A0A7V9VW55_9CHLR (Guanylate kinase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VW55_9CHLR)

HSP 1 Score: 165 bits (417), Expect = 1.270e-48
Identity = 84/146 (57.53%), Postives = 108/146 (73.97%), Query Frame = 1
Query:    1 YLFMSKEEFVDGIEREQFIEHALVYDNHYGVPRTPIEDGLASGQHVIIKVDVKGAATLRRCIAGSTSIFLAPERMSELLGRLRSRKTDDPDVLLKRFRTASEELKRAEEFDYVVFNEAGKLDEAIYRIRSIIQTEQSRIHQPEIVI 438
            Y+F+ +EEF   IE  +FIEH LVY+N YGVP+ PIE+ L  GQHVI+KVDVKGAATLRR I+ + S+FL PE M  L  RLR+RKT++  +L KRFRTA +EL+R  EFDYVV NE+ KL++A+  I +II+ EQ R+ Q  I I
Sbjct:   80 YIFLDREEFERQIELGEFIEHELVYENLYGVPKLPIEEALQRGQHVIVKVDVKGAATLRRKISTTASLFLLPESMESLFCRLRARKTEEESILRKRFRTACDELERVNEFDYVVCNESNKLEDALNNIVAIIEAEQRRVGQQPITI 225          
BLAST of mRNA_P-wetherbeei_contig58815.1.1 vs. uniprot
Match: A0A7W0QPZ7_9CHLR (Guanylate kinase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0QPZ7_9CHLR)

HSP 1 Score: 165 bits (417), Expect = 1.750e-48
Identity = 85/146 (58.22%), Postives = 107/146 (73.29%), Query Frame = 1
Query:    1 YLFMSKEEFVDGIEREQFIEHALVYDNHYGVPRTPIEDGLASGQHVIIKVDVKGAATLRRCIAGSTSIFLAPERMSELLGRLRSRKTDDPDVLLKRFRTASEELKRAEEFDYVVFNEAGKLDEAIYRIRSIIQTEQSRIHQPEIVI 438
            Y F+ +++F   I    F+EHALVYDN YGVPR PI DGLA+G+HVI+KVDV+GAATLR+ I  + SIFL PE M  L  RL  RKT+  DV++KRFRTA  EL++ + FDYVVFNEAGKL EA+  I +II+ EQ R+ QP I +
Sbjct:   91 YRFLERDDFERQIAAGDFVEHALVYDNLYGVPRRPIVDGLAAGKHVIVKVDVEGAATLRKLIPSAASIFLLPESMDVLWQRLHHRKTEPLDVIVKRFRTACVELEQIDAFDYVVFNEAGKLKEALRTIITIIEAEQRRVDQPPITL 236          
BLAST of mRNA_P-wetherbeei_contig58815.1.1 vs. uniprot
Match: A0A6J4V1N8_9CHLR (Guanylate kinase n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4V1N8_9CHLR)

HSP 1 Score: 164 bits (415), Expect = 1.890e-47
Identity = 81/146 (55.48%), Postives = 106/146 (72.60%), Query Frame = 1
Query:    1 YLFMSKEEFVDGIEREQFIEHALVYDNHYGVPRTPIEDGLASGQHVIIKVDVKGAATLRRCIAGSTSIFLAPERMSELLGRLRSRKTDDPDVLLKRFRTASEELKRAEEFDYVVFNEAGKLDEAIYRIRSIIQTEQSRIHQPEIVI 438
            Y F+ +++F   I   QF+EHALVYDN YGVPR  I DGLA+GQHVI+KVDV GA TLR  I  + SIF+ PE M  LL RLR+RKT+DP++L KRFRTA+ E+ RA EFDY++FN AG++ E +  + S+I+ E+ R  QP + I
Sbjct:  145 YRFLDRDDFERQIADGQFLEHALVYDNLYGVPRQDIVDGLAAGQHVIVKVDVAGAHTLRTLIGNTVSIFMLPESMDALLNRLRARKTEDPEILAKRFRTAAAEIDRAGEFDYIIFNRAGRMAETVTALCSVIEAEKVRAVQPVVTI 290          
BLAST of mRNA_P-wetherbeei_contig58815.1.1 vs. uniprot
Match: A0A838GIY0_9CHLR (Guanylate kinase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A838GIY0_9CHLR)

HSP 1 Score: 160 bits (406), Expect = 8.050e-47
Identity = 83/146 (56.85%), Postives = 106/146 (72.60%), Query Frame = 1
Query:    1 YLFMSKEEFVDGIEREQFIEHALVYDNHYGVPRTPIEDGLASGQHVIIKVDVKGAATLRRCIAGSTSIFLAPERMSELLGRLRSRKTDDPDVLLKRFRTASEELKRAEEFDYVVFNEAGKLDEAIYRIRSIIQTEQSRIHQPEIVI 438
            Y F+ +E+F   I    F+EHALVYDN YGVPR PI +GLA+G+HVI+KVDV+GAATLR  I  + SIFL PE M  L  RL  RKT+ P+V++KRFRTA  EL++ + FDYVVFNEA KL +A+  I +II+ EQ R+ QP I +
Sbjct:   91 YRFLEREDFERRIAAGFFVEHALVYDNLYGVPRQPIVEGLAAGKHVIVKVDVEGAATLRDLIPSAVSIFLLPESMDALWQRLHHRKTEPPEVIVKRFRTACVELEQIDTFDYVVFNEADKLKDALKHIVTIIEAEQRRVAQPPITL 236          
BLAST of mRNA_P-wetherbeei_contig58815.1.1 vs. uniprot
Match: A0A6J4U5X7_9CHLR (Guanylate kinase n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4U5X7_9CHLR)

HSP 1 Score: 157 bits (397), Expect = 2.440e-45
Identity = 75/141 (53.19%), Postives = 101/141 (71.63%), Query Frame = 1
Query:    1 YLFMSKEEFVDGIEREQFIEHALVYDNHYGVPRTPIEDGLASGQHVIIKVDVKGAATLRRCIAGSTSIFLAPERMSELLGRLRSRKTDDPDVLLKRFRTASEELKRAEEFDYVVFNEAGKLDEAIYRIRSIIQTEQSRIHQ 423
            Y F S+++F  GI   +F+EHA VY  HYGVPR  +   LA GQ V++KVD++GAA +RR    +T IFLAPE M+ELL RLRSRKTDDP+ L++RF TAS EL  A +FDYV+FNEA +L + + +I +++  E+ RI Q
Sbjct:  102 YYFYSEDDFATGIANGEFLEHATVYGRHYGVPRGQVRQALARGQDVVVKVDIQGAAAIRRLAPHATFIFLAPESMAELLHRLRSRKTDDPEALMRRFGTASRELAAANDFDYVIFNEANRLQQTLEQIAAVVSAERCRIRQ 242          
BLAST of mRNA_P-wetherbeei_contig58815.1.1 vs. uniprot
Match: A0A2H5YQD3_9BACT (Guanylate kinase n=3 Tax=Bacteria TaxID=2 RepID=A0A2H5YQD3_9BACT)

HSP 1 Score: 155 bits (393), Expect = 4.170e-45
Identity = 78/146 (53.42%), Postives = 105/146 (71.92%), Query Frame = 1
Query:    1 YLFMSKEEFVDGIEREQFIEHALVYDNHYGVPRTPIEDGLASGQHVIIKVDVKGAATLRRCIAGSTSIFLAPERMSELLGRLRSRKTDDPDVLLKRFRTASEELKRAEEFDYVVFNEAGKLDEAIYRIRSIIQTEQSRIHQPEIVI 438
            Y FMS+EEF+   ER +F+E A VY + YGVP+  +   L SG+ V++KVDV+GAA++RR +  +  IFLAP  MSEL+ RLRSRKTDDP  L++R  TAS EL +  EFDYVVFNE+ ++D  +  I +I+  EQ R+HQPE+VI
Sbjct:   72 YFFMSREEFLQARERGEFLESAEVYGHLYGVPKDRVRKALRSGKSVVVKVDVQGAASIRRLVPQAILIFLAPPSMSELMQRLRSRKTDDPATLMERIATASRELAQVYEFDYVVFNESDQIDRTLATIDAILLAEQCRVHQPEVVI 217          
BLAST of mRNA_P-wetherbeei_contig58815.1.1 vs. uniprot
Match: UPI000AC2E754 (guanylate kinase n=1 Tax=Thermorudis peleae TaxID=1382356 RepID=UPI000AC2E754)

HSP 1 Score: 155 bits (392), Expect = 5.910e-45
Identity = 76/146 (52.05%), Postives = 107/146 (73.29%), Query Frame = 1
Query:    1 YLFMSKEEFVDGIEREQFIEHALVYDNHYGVPRTPIEDGLASGQHVIIKVDVKGAATLRRCIAGSTSIFLAPERMSELLGRLRSRKTDDPDVLLKRFRTASEELKRAEEFDYVVFNEAGKLDEAIYRIRSIIQTEQSRIHQPEIVI 438
            Y FMS+EEF++  ER +F+E A VY + YGVP+  I   L +G+ V++KVDV+GAA++RR +  +  IFLAP  MSEL+ RLR RKTDDP  L++R  TAS EL+   +FDYVVFNE  +L+E +  I +II+ EQ+R+HQPE+++
Sbjct:   72 YYFMSREEFLEARERGEFLESAEVYGHLYGVPKERIRRALRAGKSVVVKVDVQGAASIRRLVPQAVLIFLAPPSMSELMQRLRQRKTDDPATLMERIATASRELECVYDFDYVVFNEHDRLEETVATISAIIEAEQARVHQPEVIV 217          
BLAST of mRNA_P-wetherbeei_contig58815.1.1 vs. uniprot
Match: A0A7V9F919_9CHLR (Guanylate kinase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9F919_9CHLR)

HSP 1 Score: 154 bits (388), Expect = 1.450e-44
Identity = 79/146 (54.11%), Postives = 105/146 (71.92%), Query Frame = 1
Query:    1 YLFMSKEEFVDGIEREQFIEHALVYDNHYGVPRTPIEDGLASGQHVIIKVDVKGAATLRRCIAGSTSIFLAPERMSELLGRLRSRKTDDPDVLLKRFRTASEELKRAEEFDYVVFNEAGKLDEAIYRIRSIIQTEQSRIHQPEIVI 438
            Y FM++ EFV   E++ F+E A+VY N YGVP+  I     SG+ V++KVDV+G+AT+R+ I  S  IFL P  MSELLGRLRSRKTDDPDVL++R  TA+ EL  A+ FDYVVFNE+ +LD+ + +I +II  E SR+ Q EI +
Sbjct:   55 YYFMTEAEFVAQHEQDGFLEAAIVYGNWYGVPKGRIRAAFQSGKSVVVKVDVQGSATIRQAIPDSVLIFLVPPSMSELLGRLRSRKTDDPDVLMQRLSTATRELAAAKSFDYVVFNESDQLDDTVNQISAIIVAESSRMEQHEITV 200          
BLAST of mRNA_P-wetherbeei_contig58815.1.1 vs. uniprot
Match: A0A7V8X590_9CHLR (Guanylate kinase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8X590_9CHLR)

HSP 1 Score: 154 bits (389), Expect = 2.650e-44
Identity = 85/149 (57.05%), Postives = 103/149 (69.13%), Query Frame = 1
Query:    1 YLFMSKEEFVDGIEREQFIEHALVYDNHYGVPRTPIEDGLASGQHVIIKVDVKGAATLRRCIAGSTSIFLAPERMSELLGRLRSRKTDDPDVLLKRFRTASEELKRAEEFDYVVFNEAGKLDEAIYRIRSIIQTEQSRIHQPEIVITNA 447
            Y F+ +++    IE  +++E   VY N YGVPR PI +GLA+GQHVIIKVDVKGAATLR  I   TS+FL  E M EL  RL  RKTD  + + +RFRTA EEL RA+EFDYVVFNEA KLD  +  IR II  E  RI+Q E+ IT+A
Sbjct:   85 YNFLDRDDLKRQIEAGEYLESDNVYGNLYGVPRRPILEGLANGQHVIIKVDVKGAATLRSKIDPVTSMFLTAESMEELYRRLSDRKTDKQEAIARRFRTACEELDRADEFDYVVFNEACKLDRTVADIRRIIDAELRRINQSEVRITSA 233          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58815.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7W0PMM4_9CHLR1.530e-4961.81Guanylate kinase n=1 Tax=Chloroflexia bacterium Ta... [more]
A0A7V9VW55_9CHLR1.270e-4857.53Guanylate kinase n=1 Tax=Chloroflexia bacterium Ta... [more]
A0A7W0QPZ7_9CHLR1.750e-4858.22Guanylate kinase n=1 Tax=Chloroflexia bacterium Ta... [more]
A0A6J4V1N8_9CHLR1.890e-4755.48Guanylate kinase n=1 Tax=uncultured Thermomicrobia... [more]
A0A838GIY0_9CHLR8.050e-4756.85Guanylate kinase n=1 Tax=Chloroflexia bacterium Ta... [more]
A0A6J4U5X7_9CHLR2.440e-4553.19Guanylate kinase n=1 Tax=uncultured Thermomicrobia... [more]
A0A2H5YQD3_9BACT4.170e-4553.42Guanylate kinase n=3 Tax=Bacteria TaxID=2 RepID=A0... [more]
UPI000AC2E7545.910e-4552.05guanylate kinase n=1 Tax=Thermorudis peleae TaxID=... [more]
A0A7V9F919_9CHLR1.450e-4454.11Guanylate kinase n=1 Tax=Chloroflexia bacterium Ta... [more]
A0A7V8X590_9CHLR2.650e-4457.05Guanylate kinase n=1 Tax=Chloroflexia bacterium Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58815contigP-wetherbeei_contig58815:2..451 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1382356.JQMP01000003_gene1307
Preferred namegmk
PFAMsGuanylate_kin
Model size450
Max annot lvl189775|Thermomicrobia
KEGG rclassRC00002
KEGG koko:K00942
KEGG ReactionR00332,R02090
KEGG Pathwayko00230,ko01100,map00230,map01100
KEGG ModuleM00050
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.27e-43
EggNOG OGsCOG0194@1|root,COG0194@2|Bacteria,2G6EW@200795|Chloroflexi,27XXM@189775|Thermomicrobia
EC2.7.4.8
DescriptionEssential for recycling GMP and indirectly, cGMP
Cds size441
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186870.060274-UTR-P-wetherbeei_contig58815:1..101683186870.060274-UTR-P-wetherbeei_contig58815:1..10Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig58815 2..10 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186870.0729501-CDS-P-wetherbeei_contig58815:10..4511683186870.0729501-CDS-P-wetherbeei_contig58815:10..451Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58815 11..451 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58815.1.1prot_P-wetherbeei_contig58815.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58815 11..451 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58815.1.1

>prot_P-wetherbeei_contig58815.1.1 ID=prot_P-wetherbeei_contig58815.1.1|Name=mRNA_P-wetherbeei_contig58815.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=147bp
MSKEEFVDGIEREQFIEHALVYDNHYGVPRTPIEDGLASGQHVIIKVDVK
GAATLRRCIAGSTSIFLAPERMSELLGRLRSRKTDDPDVLLKRFRTASEE
LKRAEEFDYVVFNEAGKLDEAIYRIRSIIQTEQSRIHQPEIVITNA*
back to top

mRNA from alignment at P-wetherbeei_contig58815:2..451+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58815.1.1 ID=mRNA_P-wetherbeei_contig58815.1.1|Name=mRNA_P-wetherbeei_contig58815.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig58815:2..451+ (Phaeothamnion wetherbeei SAG_119_79)
TACCTCTTCATGAGCAAGGAGGAGTTCGTGGACGGCATCGAGCGGGAGCA GTTCATCGAGCATGCGCTGGTCTACGACAACCACTATGGCGTTCCCCGGA CGCCGATCGAGGACGGCCTGGCCTCTGGCCAGCACGTCATCATCAAGGTG GACGTGAAGGGCGCGGCGACCCTCCGCCGCTGCATCGCGGGATCGACCTC GATCTTCCTCGCGCCGGAGCGGATGTCCGAGCTGCTGGGCCGCCTGCGGT CCCGCAAGACCGATGACCCGGACGTGCTGCTGAAGCGGTTTCGCACGGCC AGCGAGGAGCTGAAGCGGGCAGAGGAGTTCGACTACGTCGTCTTCAACGA GGCGGGCAAGCTGGACGAGGCGATCTACCGCATCCGCTCGATCATCCAGA CCGAGCAGTCCCGCATCCACCAGCCCGAGATCGTCATCACCAACGCCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig58815:2..451+

>mRNA_P-wetherbeei_contig58815.1.1 ID=mRNA_P-wetherbeei_contig58815.1.1|Name=mRNA_P-wetherbeei_contig58815.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig58815:2..451+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCAAGGAGGAGTTCGTGGACGGCATCGAGCGGGAGCAGTTCATCGA
GCATGCGCTGGTCTACGACAACCACTATGGCGTTCCCCGGACGCCGATCG
AGGACGGCCTGGCCTCTGGCCAGCACGTCATCATCAAGGTGGACGTGAAG
GGCGCGGCGACCCTCCGCCGCTGCATCGCGGGATCGACCTCGATCTTCCT
CGCGCCGGAGCGGATGTCCGAGCTGCTGGGCCGCCTGCGGTCCCGCAAGA
CCGATGACCCGGACGTGCTGCTGAAGCGGTTTCGCACGGCCAGCGAGGAG
CTGAAGCGGGCAGAGGAGTTCGACTACGTCGTCTTCAACGAGGCGGGCAA
GCTGGACGAGGCGATCTACCGCATCCGCTCGATCATCCAGACCGAGCAGT
CCCGCATCCACCAGCCCGAGATCGTCATCACCAACGCCTGA
back to top