mRNA_P-wetherbeei_contig588.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig588.2.1
Unique NamemRNA_P-wetherbeei_contig588.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A6U0WI81_9STRA (Transmembrane protein 231 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0WI81_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.830e-54
Identity = 100/234 (42.74%), Postives = 147/234 (62.82%), Query Frame = 1
Query:    1 FQAFFTSMAQVNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLTPSATVSSEQALFSKVLDSYAARNVTMDFTNRYVLWEAG--QAPTGGARVAAAGSATGIFNATMTIRIDQQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVYFNQ 696
            F   ++S   V SL     R  L+QSR  D N DGL + + LN+Q+P+A  E++   + + FFQ+ L  RA++  +  A+ EA+ G+P   + +DGDF LRQT+PL V GG++ PY D+PLL      S+EQA  S+++++YAARN+TM +T  Y+LW     + P  G    A G    IFN T+T+RI  + V YTP +SEVL  GWIQYL++ VVV F+L++   ++Y+NQ
Sbjct:   92 FSLAYSSSNAVASLLPDQARAGLLQSRERDDNRDGLSEAIELNLQLPLAREEELRWVQMVAFFQSTLSTRARVIFEAAAFVEASGGVPGAGLTVDGDFRLRQTYPLNVRGGFERPYEDEPLLDAPGITSAEQASVSRIMEAYAARNLTMVYTPTYLLWHPTLREQPVNGG---ALGDGARIFNVTITVRIPTERVSYTPQISEVLFDGWIQYLSILVVVAFILEKLLSFIYYNQ 322          
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A7S3JT02_9STRA (Transmembrane protein 231 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JT02_9STRA)

HSP 1 Score: 183 bits (464), Expect = 4.420e-53
Identity = 93/237 (39.24%), Postives = 151/237 (63.71%), Query Frame = 1
Query:    1 FQAFFTSMAQVNSLY----QAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLTPSATVSSEQALFSKVLDSYAARNVTMDFTNRYVLWEAGQAPTGGARVA-AAGSATGIFNATMTIRIDQQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVYFNQ 696
            F+  ++SM+ ++S++    Q +LRVP+++S  +D N DG+ D+ +L   +P+   EK++S   + FF  +L+ +A+L M+T+AYA A + +P RA   DGDFLL Q WPL V GGYQ PY + PL+ P++ V ++  LF ++L +Y ARN +M +   Y +W     P  G R   A+ S    FN T+ +R+    +LYTPP +EV +  W++YL++F+V+ F+LDR   +V++NQ
Sbjct:   81 FEILYSSMSSISSIFARETQNSLRVPVLRSLELDKNRDGITDQFSLEALIPLQQGEKIHSTSVMAFFNVRLKRKARLEMETLAYAHADSAMPGRAAYFDGDFLLLQKWPLRVKGGYQLPYENTPLI-PTSNVDAQSILFPRLLAAYRARNNSMHYNQMYTVWS----PRAGKRDDYASSSLPDSFNFTLNMRVPIAQILYTPPATEVFKDAWLKYLSLFIVIAFLLDRLCSFVFYNQ 312          
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A7S3MEB7_9STRA (Transmembrane protein 231 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEB7_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.540e-52
Identity = 98/226 (43.36%), Postives = 136/226 (60.18%), Query Frame = 1
Query:   10 FFTSMAQVNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLTPSATVSSEQALFSKVLDSYAARNVTMDFTNRYVLWEAGQAPTGGARVAAAGSATGIFNATMTIRIDQQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVY 687
            F+++ AQ+N LY  +LR+PL QS  +D N DG  DR+   ++MP+A  E ++ F ALV+  TQL  +A+   D V+YA   +      ++LDGD + RQTWPL V GG++ PY DDPL    A +S+E    S V+  Y ARN TM + ++Y   E  Q+      V +  SA   FNA+M IRI  Q + YTPPVS VL+  WIQY+A F VV F+L R   +V+
Sbjct:   90 FYSTSAQINELYSESLRIPLFQSAELDDNRDGRTDRLEFGIRMPLAPTETIHGFTALVYVNTQLDSKARYVFDGVSYATFESASAINQLSLDGDLMFRQTWPLTVKGGFRVPYQDDPLFDLKAGISAEDVSISSVMRRYNARNFTMRYVSQYAQVERRQSV-----VPSDHSAPNYFNASMVIRIPAQPIRYTPPVSTVLKHAWIQYIAFFAVVSFLLFRLNSFVF 310          
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: F0Y486_AURAN (Transmembrane protein 231 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y486_AURAN)

HSP 1 Score: 159 bits (401), Expect = 6.130e-44
Identity = 90/237 (37.97%), Postives = 134/237 (56.54%), Query Frame = 1
Query:    1 FQAFFTSMAQVNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTG-LPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLTPSA-TVSSEQALFSKVLDSYAARNVTMDFTNRYVLWEAGQAPTGGARVAAAGSATGI---FNATMTIRIDQQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVYFNQ 696
            FQ  F+SMA V +LY   LRVP ++S  +D+N DG+ D+  L   +P+   E+V     + F+  +L+ RA++ MD +AY+    G +  +A+ +DGD  LRQ WP    GGY  PY   PLL P+   ++ E+ L   +   Y  RN TMD+   Y +W     P  G          G+   FN TM +RI +  +LYTP  SEVL+  WI+YLA+FVVV ++L++   +V++NQ
Sbjct:   78 FQIVFSSMADVENLYSGELRVPTLRSIELDLNRDGMADQFHLTALIPLRKGERVLHADLVTFYDVKLRRRARVHMDALAYSSGGGGGMAGKALYVDGDVGLRQRWPFRAKGGYYLPYTKYPLLDPTDHELTLEETLMPNIFYGYRNRNNTMDYHELYKVWSPAPPPIDGP--------FGVREEFNFTMVMRIPEMEILYTPTASEVLKDAWIKYLALFVVVKYLLEKLCAFVFYNQ 306          
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A7S4ECR2_9STRA (Transmembrane protein 231 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECR2_9STRA)

HSP 1 Score: 157 bits (396), Expect = 5.840e-43
Identity = 89/232 (38.36%), Postives = 132/232 (56.90%), Query Frame = 1
Query:    4 QAFFTSMAQVNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLTPSA-TVSSEQALFSKVLDSYAARNVTMDFTNRYVLWEAGQAPTGGARVAAAGSATGIFNATMTIRIDQQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVYFNQ 696
            Q  F+SM  V +LY   LRV  +Q+  +D N DG+ D        P+A  E +       FF+T+L  RA++  D++A AE   G+   ++ +DGD++L+Q WP    GGY  PY   PLL PS   +  ++ L   ++  Y  RN T+D+  +Y +W     P+ G  V     A   FN TM +R+ QQ+VLYTP  SEVL+  W++YLA+FVVV ++L+ FA +V +NQ
Sbjct:   85 QIVFSSMTDVENLYGPELRVCNLQNIELDFNRDGVTDEFHFTALCPLAKGETILGASVATFFRTKLSSRARVDFDSLAIAEHRDGMGGGSLFVDGDYILKQKWPFRAKGGYYLPYKRFPLLDPSDHKIKLQETLLPNIIFGYRNRNNTLDYVQQYKVWT----PSPG--VPDNHGAYANFNLTMVLRVPQQDVLYTPTASEVLKDAWLKYLAIFVVVKYLLEFFASFVAYNQ 310          
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A7S2GB28_9STRA (Transmembrane protein 231 n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GB28_9STRA)

HSP 1 Score: 143 bits (361), Expect = 5.690e-38
Identity = 87/241 (36.10%), Postives = 136/241 (56.43%), Query Frame = 1
Query:    4 QAFFTSMAQVNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLTPSATV----SSEQAL----FSKVLDSYAARNVTMDFTNRYVLWEAGQAPTG-GARVAAAGSATGIFNATMTIRIDQQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVYFNQV 699
            Q  F+SM  VN+L+   LR P++++   D N DG+PD++ LN+ MP+ + E + S K L+F+   L+  A+L MD ++Y    + L   A+ +DGD   +Q   L V  GY++PY  DPLL PS+ +    S+ Q         ++  Y  R+ TM+  +R+ +W   Q PT         G  +  FN T  IR   QN++Y+P VSEVL   WI+YLA+ VVV +++D  + YV+ +Q+
Sbjct:   50 QISFSSMNSVNTLFGDTLRAPVLRTSESDDNGDGIPDKLKLNMVMPIYSGEVINSVKLLLFYDVTLRRHARLKMDAMSYLSHESPLSGGALFVDGDLEWKQRSALPVSSGYRQPYVTDPLLDPSSVLPWKKSNGQGASLIDLPSLITRYRDRDFTMELNSRHAIW---QQPTAVDYSEENNGMTSRSFNLTAVIRYPLQNIMYSPEVSEVLFDAWIRYLAVLVVVMYLVDLCSAYVFHHQI 287          
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A2R5GGF9_9STRA (Transmembrane protein 231 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGF9_9STRA)

HSP 1 Score: 113 bits (282), Expect = 2.920e-26
Identity = 76/229 (33.19%), Postives = 115/229 (50.22%), Query Frame = 1
Query:   13 FTSMAQVNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLTPSATVSSEQALFSKVLDSYAARNVTMDFTNRYVLWEAGQAPTGGARVAAAGSATGIFNATMTIRIDQQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVYFNQV 699
            + S   V  +Y+  LR PLI++   D N DGL DR TL V MP+ A EKV   +A+  F   L   A+L MD + Y + ++ LP R + ++G+  L Q  PL+V      P          A++ S       ++ SYA RN TM   N Y +WE  +         +  S  G F   +T+ +    + YTP ++EVL+  WIQYLA+F + + ++     +V+ NQV
Sbjct:   84 WASNEDVRDVYEPYLRAPLIRAWPEDDNLDGLADRWTLAVHMPLDADEKVMHVQAVAAFDYSLLGSAELDMDGLVYVDYSSPLPGRGLQVEGEARLHQRAPLSVRRANANPMLRFNAGRGLASMRSSSV--GAMMASYAKRNFTMVLANEYKVWEVSRGAD------SFQSTAGGFALNLTVHVPVDELTYTPDLAEVLKFAWIQYLALFALFFALIYAIRQFVFSNQV 304          
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A482SW93_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SW93_9ARCH)

HSP 1 Score: 100 bits (250), Expect = 1.060e-22
Identity = 51/145 (35.17%), Postives = 81/145 (55.86%), Query Frame = 1
Query:   13 FTSMAQVNSLYQAAL---RVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLTPSATVSSEQALFSKVLDSYAARN 438
            +++ A +N+ Y  A    RVP ++S  +D N DG  DR+ ++V +P+ A E +  F A V+   +L +RAK+  D V +       P + +++DGD +LRQTWPL V GGY+  Y +D L    +T  ++      V+  Y ARN
Sbjct:    4 YSTNAYINAAYSNAYTQTRVPTLRSAEMDDNRDGKTDRLEVSVLLPITADESISGFTAAVYLDVKLNERAKVLFDGVGFVHYEGSTPLQKLSVDGDMMLRQTWPLKVYGGYRRLYENDALYDVDSTTPAQDVFIQSVMQKYNARN 148          
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A5B8MYQ8_9CHLO (Transmembrane protein 231 n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYQ8_9CHLO)

HSP 1 Score: 97.1 bits (240), Expect = 2.710e-20
Identity = 69/230 (30.00%), Postives = 111/230 (48.26%), Query Frame = 1
Query:   10 FFTSMAQVNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLAVGGGYQEPYADDPLLT--PSATVSSEQAL-FSKVLDSYAARNVTMDFTNRYVLWEAGQAPTGGARVAAAGSATGIFNATMTIRI-DQQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVY 687
            F++++  +N  ++       +     D N DG  D +   ++M      KV   K L  F+ +L++R  + M ++AY E   G+P +A+  DG   LRQ  PL  G   +E Y  D L+   P   + +   L  + +L+ Y  RN T  F   Y  W+AG A  GG            F   + +R+   Q ++YTP   E+L+ GWIQ+LA FVV +++L  +  YV+
Sbjct:   80 FWSTLPNLNRAFETRFVSTDLSVTQEDFNFDGKADAI--RIKMVSNVGAKVQGVKVLAQFEYKLRERVHMNMKSLAYVEHGAGMPGKALFADGSLALRQQDPLPDGSTRRE-YLSDLLVDGEPDGVLQASSKLRVNAMLEEYFFRNETTVFDTNYESWQAGDAAHGG------------FETNILLRVPSSQALVYTPSTIEILKFGWIQFLASFVVFFWLLSYWEWYVF 294          
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Match: A0A250X5A8_9CHLO (Transmembrane protein 231 n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X5A8_9CHLO)

HSP 1 Score: 90.5 bits (223), Expect = 6.960e-18
Identity = 64/225 (28.44%), Postives = 105/225 (46.67%), Query Frame = 1
Query:   31 VNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSFKALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPL---AVGGGYQEPYADD-PLLTPSATVSSEQALFSKVLDSYAARNVTMDFTNRYVLWEAGQAPTGGARVAAAGSATGIFNATMTIRID-QQNVLYTPPVSEVLQAGWIQYLAMFVVVWFVLDRFAGYVYF 690
            +N+ +        +Q+   D N DG PD   +N    + ++  VY  K L+ FQ    +  ++ M ++AY  A+TG P   + +DGD  L Q  P+   +  G Y  P  +  P  T  +  +  Q LF  ++  Y  RN T  ++N Y +W+AG   T              F   M +RI   Q + Y P   E+L+  WIQ+LA F+V+W++      +++F
Sbjct:   86 INAQFSEEFIPASVQTSVEDTNYDGKPD--VINFVARVQSSTPVYGVKVLLQFQYGFFNLVRVQMYSLAYFSASTGTPGGVLYVDGDLNLVQRSPINDMSYNGVYNYPILNSQPPNTLQSVQAPSQLLFEDIIADYKTRNYTTTYSNVYPVWKAGSGNT--------------FELKMVVRIPPNQMIWYRPQTIEMLKNAWIQFLATFIVLWWLYSYVEQFIFF 294          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig588.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6U0WI81_9STRA1.830e-5442.74Transmembrane protein 231 n=1 Tax=Pinguiococcus py... [more]
A0A7S3JT02_9STRA4.420e-5339.24Transmembrane protein 231 n=1 Tax=Aureoumbra lagun... [more]
A0A7S3MEB7_9STRA1.540e-5243.36Transmembrane protein 231 n=1 Tax=Spumella elongat... [more]
F0Y486_AURAN6.130e-4437.97Transmembrane protein 231 (Fragment) n=1 Tax=Aureo... [more]
A0A7S4ECR2_9STRA5.840e-4338.36Transmembrane protein 231 n=1 Tax=Pelagomonas calc... [more]
A0A7S2GB28_9STRA5.690e-3836.10Transmembrane protein 231 n=2 Tax=Dictyocha specul... [more]
A0A2R5GGF9_9STRA2.920e-2633.19Transmembrane protein 231 n=1 Tax=Hondaea fermenta... [more]
A0A482SW93_9ARCH1.060e-2235.17Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A5B8MYQ8_9CHLO2.710e-2030.00Transmembrane protein 231 n=1 Tax=Chloropicon prim... [more]
A0A250X5A8_9CHLO6.960e-1828.44Transmembrane protein 231 n=1 Tax=Chlamydomonas eu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig588contigP-wetherbeei_contig588:3541..5169 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog44056.XP_009035235.1
Preferred nameTMEM231
PFAMsTM231
Model size699
Max annot lvl2759|Eukaryota
KEGG koko:K10582,ko:K19362
KEGG Pathwayko04120,map04120
Hectar predicted targeting categoryother localisation
GOsGO:0001654,GO:0001701,GO:0001944,GO:0002065,GO:0005575,GO:0005623,GO:0005886,GO:0005929,GO:0006996,GO:0007030,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007346,GO:0007423,GO:0008150,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009987,GO:0010256,GO:0016020,GO:0016043,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030326,GO:0030855,GO:0031090,GO:0031253,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032991,GO:0035107,GO:0035108,GO:0035113,GO:0035869,GO:0036038,GO:0042733,GO:0042995,GO:0043009,GO:0043010,GO:0043226,GO:0043227,GO:0044085,GO:0044422,GO:0044425,GO:0044441,GO:0044459,GO:0044463,GO:0044464,GO:0044782,GO:0045786,GO:0045930,GO:0048513,GO:0048519,GO:0048523,GO:0048598,GO:0048731,GO:0048736,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051726,GO:0060170,GO:0060173,GO:0060271,GO:0060429,GO:0060563,GO:0065007,GO:0070925,GO:0071840,GO:0071944,GO:0072358,GO:0072359,GO:0098588,GO:0098590,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1905515
Exons5
Evalue2.72e-42
EggNOG OGsKOG4838@1|root,KOG4838@2759|Eukaryota
EC2.3.2.23
Descriptionsmoothened signaling pathway
Cds size678
COG categoryS
BRITEko00000,ko00001,ko01000,ko03036,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig588.2.1prot_P-wetherbeei_contig588.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig588 3562..5169 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186869.8357453-UTR-P-wetherbeei_contig588:3540..35611683186869.8357453-UTR-P-wetherbeei_contig588:3540..3561Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig588 3541..3561 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186869.848369-CDS-P-wetherbeei_contig588:3561..36151683186869.848369-CDS-P-wetherbeei_contig588:3561..3615Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig588 3562..3615 +
1683186869.8592527-CDS-P-wetherbeei_contig588:3819..39481683186869.8592527-CDS-P-wetherbeei_contig588:3819..3948Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig588 3820..3948 +
1683186869.8790672-CDS-P-wetherbeei_contig588:4198..44331683186869.8790672-CDS-P-wetherbeei_contig588:4198..4433Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig588 4199..4433 +
1683186869.895693-CDS-P-wetherbeei_contig588:4660..48481683186869.895693-CDS-P-wetherbeei_contig588:4660..4848Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig588 4661..4848 +
1683186869.9069052-CDS-P-wetherbeei_contig588:5097..51691683186869.9069052-CDS-P-wetherbeei_contig588:5097..5169Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig588 5098..5169 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig588.2.1

>prot_P-wetherbeei_contig588.2.1 ID=prot_P-wetherbeei_contig588.2.1|Name=mRNA_P-wetherbeei_contig588.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=226bp
MAQVNSLYQAALRVPLIQSRSVDMNSDGLPDRVTLNVQMPMAAAEKVYSF
KALVFFQTQLQDRAKLGMDTVAYAEATTGLPARAVALDGDFLLRQTWPLA
VGGGYQEPYADDPLLTPSATVSSEQALFSKVLDSYAARNVTMDFTNRYVL
WEAGQAPTGGARVAAAGSATGIFNATMTIRIDQQNVLYTPPVSEVLQAGW
IQYLAMFVVVWFVLDRFAGYVYFNQV
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mRNA from alignment at P-wetherbeei_contig588:3541..5169+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig588.2.1 ID=mRNA_P-wetherbeei_contig588.2.1|Name=mRNA_P-wetherbeei_contig588.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1629bp|location=Sequence derived from alignment at P-wetherbeei_contig588:3541..5169+ (Phaeothamnion wetherbeei SAG_119_79)
TTCCAGGCCTTCTTCACCAGCATGGCGCAGGTAAACTCCCTCTACCAGGC TGCGCTCCGGGTGCCCCTTATCCAGGTGAGTGCGATTTGCCGCCCTGCAA TCCGACGCCAATGCATGCCATCGTCTATCGATAATTTATATCTCTGGAAC TTTGCCCCCGCCGTCATCCTGGCGTCGCATCGCTGCCGCTGTGTCGCCAC CGAATTAATGCGATGAATGCCGCTGCGTCGCTTCCTCCGCTTTCGCTCCC TTCCCTCCGCTCTTTCTCATCGCTGGCAGTCGCGATCGGTGGATATGAAC AGCGATGGCCTGCCGGACCGCGTCACGCTCAACGTGCAGATGCCCATGGC GGCCGCAGAGAAGGTTTACTCTTTTAAGGCCCTCGTCTTCTTCCAGACGC AGCTCCAGGTAAAGATCATCTTAAGAATTATATCAACGGTGCAGCGGTGC GGCATCCGGATTGCGGTCGGGCAAGTTTTGAGTGCTGACCTGCAAGCTCT CTCGTTCATTCCTTCACTTCATTTGCACGCGAACTTGACTGGTCCTGTAA CGTCTCAAACTATGACGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTG GATGGTGGCAATGGCGAATGTGGAACGGCGGTGGCGGCTACTATTGCCGG ATCGGCAGGACCGCGCCAAGCTGGGCATGGACACAGTGGCCTATGCCGAG GCCACGACCGGCCTGCCCGCCCGCGCCGTCGCCCTCGATGGGGACTTTCT GCTGAGGCAGACATGGCCGCTCGCAGTCGGCGGCGGGTACCAGGAGCCGT ACGCGGACGACCCGCTGTTGACGCCGTCGGCCACGGTGTCATCGGAGCAG GCGCTCTTCTCCAAGGTGCTCGATAGTTACGCGGCGCGGAACGGTGAGCG CCGCTGCAGGAAGAAAGAGAAGGATTGGAAATGAAGGAAAGGAAGAAAGG CGCGAAGAGGACTTACCCTTGGCGCTGGTAATGGGTTGGGATGGTTGGCG GCGGCAAATGGCGACAACGGCGGCACCGGTGGCGCGTATTTGGTGTCTCG CTCCGACGTGTTGGTTAACGACATGAAGTACCGTGCCGCTTTTCCTCGCC CCAACGTTCTTCACCGGCAGTGACGATGGACTTCACCAACCGATACGTAC TCTGGGAAGCCGGGCAGGCGCCAACTGGCGGCGCCCGCGTTGCTGCCGCC GGCTCCGCGACTGGCATTTTCAACGCGACGATGACCATCAGAATAGACCA GCAAAACGTCCTTTATACTCCGCCCGTGTCGGAAGTGTTGCAGGCCGGCT GGATCCAGGTGAAAATTAGCGTTGGTCCGGACCGCGCTGCCGCCGAGGCC ACCGCCGAGGCCAACGCCGAGGCCACCGTCGAGGCCACTGCCAAGGCCGT TCTCCTCGCCGCTTGCTATCTTCCTTCCAGGCGGGCCGTTCGATTATGCC TCCGACACTGCCAAACCCCTCCGGCCGCCGCTCTTTCTATCTCAGTCCCC TCCACGGCGACATGTTTCATCCTGTTGTCCCCCCACTTCCTGGCCGCTCA TTCGCAGTACCTGGCCATGTTTGTCGTGGTGTGGTTCGTGCTGGACCGCT TCGCGGGATACGTATACTTTAACCAGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig588:3541..5169+

>mRNA_P-wetherbeei_contig588.2.1 ID=mRNA_P-wetherbeei_contig588.2.1|Name=mRNA_P-wetherbeei_contig588.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig588:3541..5169+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGCAGGTAAACTCCCTCTACCAGGCTGCGCTCCGGGTGCCCCTTAT
CCAGTCGCGATCGGTGGATATGAACAGCGATGGCCTGCCGGACCGCGTCA
CGCTCAACGTGCAGATGCCCATGGCGGCCGCAGAGAAGGTTTACTCTTTT
AAGGCCCTCGTCTTCTTCCAGACGCAGCTCCAGGACCGCGCCAAGCTGGG
CATGGACACAGTGGCCTATGCCGAGGCCACGACCGGCCTGCCCGCCCGCG
CCGTCGCCCTCGATGGGGACTTTCTGCTGAGGCAGACATGGCCGCTCGCA
GTCGGCGGCGGGTACCAGGAGCCGTACGCGGACGACCCGCTGTTGACGCC
GTCGGCCACGGTGTCATCGGAGCAGGCGCTCTTCTCCAAGGTGCTCGATA
GTTACGCGGCGCGGAACGTGACGATGGACTTCACCAACCGATACGTACTC
TGGGAAGCCGGGCAGGCGCCAACTGGCGGCGCCCGCGTTGCTGCCGCCGG
CTCCGCGACTGGCATTTTCAACGCGACGATGACCATCAGAATAGACCAGC
AAAACGTCCTTTATACTCCGCCCGTGTCGGAAGTGTTGCAGGCCGGCTGG
ATCCAGTACCTGGCCATGTTTGTCGTGGTGTGGTTCGTGCTGGACCGCTT
CGCGGGATACGTATACTTTAACCAGGTG
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