mRNA_P-wetherbeei_contig58756.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58756.1.1
Unique NamemRNA_P-wetherbeei_contig58756.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig58756.1.1 vs. uniprot
Match: A0A2M8U8S8_9PROT (ABC transporter domain-containing protein n=1 Tax=Ferrovibrio sp. TaxID=1917215 RepID=A0A2M8U8S8_9PROT)

HSP 1 Score: 223 bits (567), Expect = 3.090e-70
Identity = 112/154 (72.73%), Postives = 128/154 (83.12%), Query Frame = 1
Query:    4 LTLDPAEAERSITRYLNLVGLGKFRKAYPHELSGGMRQRVAIARALATEPQLLLMDEPLAALDAQTRLVMQQELLRIWKETKSTVIYITHDIGEALMLADHVVVMTARPGRIKAVQDIPFGRDRDVVEMRANPAFGRLESELWRLVAEEVGHSL 465
            L +D   A +    YL LVGL KF  +YPHELSGGMRQRV IARALATEP+LLLMDEPLAALDAQTR+V+QQELLRIW +TKSTVIYITHD+GEAL LAD VV+MTARPGRIK +++IPFGR+RD  E+R  P FG LE +LWRL+AEEVG SL
Sbjct:  135 LKIDRDAAAQRADYYLKLVGLEKFHLSYPHELSGGMRQRVCIARALATEPKLLLMDEPLAALDAQTRVVIQQELLRIWLQTKSTVIYITHDLGEALTLADRVVLMTARPGRIKTIRNIPFGRNRDAYELRGTPEFGELEVDLWRLLAEEVGQSL 288          
BLAST of mRNA_P-wetherbeei_contig58756.1.1 vs. uniprot
Match: UPI00131CC6BD (ABC transporter ATP-binding protein n=1 Tax=Acidisphaera sp. S103 TaxID=1747223 RepID=UPI00131CC6BD)

HSP 1 Score: 221 bits (562), Expect = 8.460e-70
Identity = 110/155 (70.97%), Postives = 127/155 (81.94%), Query Frame = 1
Query:    1 GLTLDPAEAERSITRYLNLVGLGKFRKAYPHELSGGMRQRVAIARALATEPQLLLMDEPLAALDAQTRLVMQQELLRIWKETKSTVIYITHDIGEALMLADHVVVMTARPGRIKAVQDIPFGRDRDVVEMRANPAFGRLESELWRLVAEEVGHSL 465
            GL L  + AE  I R L LVGL  FR+AYPHELSGGMRQRV+IARALAT+P LLLMDEPLAALDAQTR+VMQQEL+ IW+ T STV+Y+THDI EA+ LAD VVVMT+RPGRIKAV+ +PFGRDRDV+ +R  P F  LE+ELW +V EEVG SL
Sbjct:  111 GLKLTASVAEERIARNLALVGLAAFRRAYPHELSGGMRQRVSIARALATDPLLLLMDEPLAALDAQTRIVMQQELINIWQRTNSTVVYVTHDIAEAVTLADTVVVMTSRPGRIKAVRSVPFGRDRDVIALRREPVFRELEAELWTMVTEEVGDSL 265          
BLAST of mRNA_P-wetherbeei_contig58756.1.1 vs. uniprot
Match: A0A4Q3Y0E7_9PROT (ABC transporter ATP-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A4Q3Y0E7_9PROT)

HSP 1 Score: 206 bits (523), Expect = 8.220e-64
Identity = 103/155 (66.45%), Postives = 122/155 (78.71%), Query Frame = 1
Query:    1 GLTLDPAEAERSITRYLNLVGLGKFRKAYPHELSGGMRQRVAIARALATEPQLLLMDEPLAALDAQTRLVMQQELLRIWKETKSTVIYITHDIGEALMLADHVVVMTARPGRIKAVQDIPFGRDRDVVEMRANPAFGRLESELWRLVAEEVGHSL 465
            GL +   +AE     Y  LVGL  F KA+PHELSGGMRQRVAIARALATEP LLLMDEPLAALDAQTRLVMQ EL RIW  T+STV+Y+THDI EAL LAD +++MTARPGR+KAV D+PFGRD   ++ R  P FG L++++W +VA+EVG SL
Sbjct:  115 GLEVPSGDAEARRLEYQGLVGLADFDKAFPHELSGGMRQRVAIARALATEPLLLLMDEPLAALDAQTRLVMQSELYRIWAATQSTVVYVTHDIDEALSLADRLLIMTARPGRVKAVIDVPFGRDVSPLQRRQLPEFGTLQAQVWAMVADEVGQSL 269          
BLAST of mRNA_P-wetherbeei_contig58756.1.1 vs. uniprot
Match: A0A7Y9JMX8_9MICO (ABC-type nitrate/sulfonate/bicarbonate transport system ATPase subunit n=2 Tax=Microbacterium pseudoresistens TaxID=640634 RepID=A0A7Y9JMX8_9MICO)

HSP 1 Score: 192 bits (487), Expect = 1.760e-58
Identity = 100/154 (64.94%), Postives = 115/154 (74.68%), Query Frame = 1
Query:    4 LTLDPAEAERSITRYLNLVGLGKFRKAYPHELSGGMRQRVAIARALATEPQLLLMDEPLAALDAQTRLVMQQELLRIWKETKSTVIYITHDIGEALMLADHVVVMTARPGRIKAVQDIPFGRDRDVVEMRANPAFGRLESELWRLVAEEVGHSL 465
            L +  AE  R     L LVGL  F  AYPHELSGGMRQRV+IARALAT P LLLMDEPL+ALDAQTR+VMQQELLRIW ET+STV+YITHDI EA+ LAD V+V++ARPGRI  V++ P     DV E+R + AFG L  ELW+ VA  VG SL
Sbjct:  105 LAISSAEKSRRADEVLELVGLQGFENAYPHELSGGMRQRVSIARALATRPHLLLMDEPLSALDAQTRVVMQQELLRIWSETRSTVVYITHDIEEAVTLADRVIVLSARPGRIAMVRETPPKTTTDVTELRRDEAFGELVVELWQAVAGSVGSSL 258          
BLAST of mRNA_P-wetherbeei_contig58756.1.1 vs. uniprot
Match: UPI0007811C1E (ABC transporter ATP-binding protein n=2 Tax=unclassified Streptomyces TaxID=2593676 RepID=UPI0007811C1E)

HSP 1 Score: 192 bits (487), Expect = 3.860e-58
Identity = 100/154 (64.94%), Postives = 117/154 (75.97%), Query Frame = 1
Query:    4 LTLDPAEAERSITRYLNLVGLGKFRKAYPHELSGGMRQRVAIARALATEPQLLLMDEPLAALDAQTRLVMQQELLRIWKETKSTVIYITHDIGEALMLADHVVVMTARPGRIKAVQDIPFGRDRDVVEMRANPAFGRLESELWRLVAEEVGHSL 465
            L L   EAE  +   L LVGL  F  AYPHELSGGMRQRVAIARALAT P+LLLMDEPLAALDAQTRLVMQQELLR+W++T ST++Y+THDI EA+ LA  VVV++ARPGRI   Q IPF   R V E+R    FG+L   LW++VA++VG SL
Sbjct:  112 LRLSRGEAEERVGWVLGLVGLADFAGAYPHELSGGMRQRVAIARALATRPRLLLMDEPLAALDAQTRLVMQQELLRLWEDTGSTIVYVTHDIEEAVTLAHRVVVLSARPGRICLDQRIPFSFPRQVTEVRQRAEFGQLTMGLWQMVADQVGQSL 265          
BLAST of mRNA_P-wetherbeei_contig58756.1.1 vs. uniprot
Match: UPI0018F1AB16 (ABC transporter ATP-binding protein n=1 Tax=Qaidamihabitans albus TaxID=2795733 RepID=UPI0018F1AB16)

HSP 1 Score: 191 bits (486), Expect = 4.220e-58
Identity = 100/154 (64.94%), Postives = 118/154 (76.62%), Query Frame = 1
Query:    4 LTLDPAEAERSITRYLNLVGLGKFRKAYPHELSGGMRQRVAIARALATEPQLLLMDEPLAALDAQTRLVMQQELLRIWKETKSTVIYITHDIGEALMLADHVVVMTARPGRIKAVQDIPFGRDRDVVEMRANPAFGRLESELWRLVAEEVGHSL 465
            L LD A+A   +   L LVGL +F KAYPHELSGGMRQRVAIARALAT P LLLMDEPLAALDAQTRLVMQQEL+ IW++T STV Y+THDI EA+ +AD VVV++ARPGR++ V+D+       V E+R +PAFG L  ELW  +A EVG SL
Sbjct:  116 LRLDRADAAARVADVLQLVGLSEFPKAYPHELSGGMRQRVAIARALATRPHLLLMDEPLAALDAQTRLVMQQELIDIWRQTHSTVFYVTHDIEEAVTVADRVVVLSARPGRVRMVRDVET-TGASVTELRRDPAFGDLTVELWNTIAGEVGGSL 268          
BLAST of mRNA_P-wetherbeei_contig58756.1.1 vs. uniprot
Match: A0A327UCA6_9ACTN (NitT/TauT family transport system ATP-binding protein/sulfonate transport system ATP-binding protein n=3 Tax=Streptomyces TaxID=1883 RepID=A0A327UCA6_9ACTN)

HSP 1 Score: 190 bits (482), Expect = 2.910e-57
Identity = 97/158 (61.39%), Postives = 120/158 (75.95%), Query Frame = 1
Query:    4 LTLDPAEAERSITRYLNLVGLGKFRKAYPHELSGGMRQRVAIARALATEPQLLLMDEPLAALDAQTRLVMQQELLRIWKETKSTVIYITHDIGEALMLADHVVVMTARPGRIKAVQDIPFGRDRDVVEMRANPAFGRLESELWRLVAEEVGHSLDKSN 477
            L L+  EA+  +   L+LVGL  F +AYPHELSGGMRQRVAIARALAT P LLLMDEPLAALDAQTRL+MQQE+L IW++T+STV+Y+THDI EA+ +AD VVV++ARPGRI+ V+D+P    R V +MR    FG L  +LW  +A EVG S   S+
Sbjct:  123 LRLERTEADARVAEVLDLVGLAGFTQAYPHELSGGMRQRVAIARALATRPHLLLMDEPLAALDAQTRLIMQQEVLNIWQQTRSTVVYVTHDIEEAVTVADRVVVLSARPGRIRKVRDVP-ALGRSVTDMRRESVFGDLVVDLWESIAGEVGMSASASS 279          
BLAST of mRNA_P-wetherbeei_contig58756.1.1 vs. uniprot
Match: A0A6N7HWS2_9PSEU (ATP-binding cassette domain-containing protein n=1 Tax=Pseudonocardiaceae bacterium TaxID=1873463 RepID=A0A6N7HWS2_9PSEU)

HSP 1 Score: 186 bits (472), Expect = 5.030e-56
Identity = 95/158 (60.13%), Postives = 118/158 (74.68%), Query Frame = 1
Query:    4 LTLDPAEAERSITRYLNLVGLGKFRKAYPHELSGGMRQRVAIARALATEPQLLLMDEPLAALDAQTRLVMQQELLRIWKETKSTVIYITHDIGEALMLADHVVVMTARPGRIKAVQDIPFGRDRDVVEMRANPAFGRLESELWRLVAEEVGHSLDKSN 477
            L +D  EA+  ++  L LVGL  F +AYPHELSGGMRQRVAIARALAT P LLLMDEPLAALDAQTR+VMQQELL IW++T STV Y+THDI EA+ +AD VVV++ARPG ++ V++I       V ++R    FG L +ELW+++A EVG SL   N
Sbjct:  116 LRVDRKEADARVSEVLRLVGLADFPRAYPHELSGGMRQRVAIARALATRPHLLLMDEPLAALDAQTRIVMQQELLNIWRQTHSTVFYVTHDIEEAVTVADRVVVLSARPGHVRVVREIATSTS-SVTDLRREAEFGDLVAELWKVIAGEVGVSLSDEN 272          
BLAST of mRNA_P-wetherbeei_contig58756.1.1 vs. uniprot
Match: A0A2V4AH91_9PSEU (NitT/TauT family transport system ATP-binding protein n=1 Tax=Prauserella muralis TaxID=588067 RepID=A0A2V4AH91_9PSEU)

HSP 1 Score: 186 bits (472), Expect = 5.970e-56
Identity = 96/154 (62.34%), Postives = 117/154 (75.97%), Query Frame = 1
Query:    4 LTLDPAEAERSITRYLNLVGLGKFRKAYPHELSGGMRQRVAIARALATEPQLLLMDEPLAALDAQTRLVMQQELLRIWKETKSTVIYITHDIGEALMLADHVVVMTARPGRIKAVQDIPFGRDRDVVEMRANPAFGRLESELWRLVAEEVGHSL 465
            L +D  EA+  +   L LVGL +F KAYPHELSGGMRQRVAIARALAT P LLLMDEPLAALDAQTR+VMQQELL IW++T STV Y+THDI EA+ +AD VVV++ RPGR++ V++I   R   V ++R    FG L +ELW ++A EVG SL
Sbjct:  116 LRIDRREADTRVQEVLRLVGLAEFPKAYPHELSGGMRQRVAIARALATRPHLLLMDEPLAALDAQTRIVMQQELLNIWRQTHSTVFYVTHDIEEAVTVADRVVVLSTRPGRVRLVREIGT-RTSSVTDLRRETEFGDLVAELWEVIAGEVGVSL 268          
BLAST of mRNA_P-wetherbeei_contig58756.1.1 vs. uniprot
Match: UPI001BD0F2BE (ABC transporter ATP-binding protein n=1 Tax=Micromonospora sp. NBRC 107566 TaxID=1581705 RepID=UPI001BD0F2BE)

HSP 1 Score: 184 bits (467), Expect = 3.030e-55
Identity = 97/159 (61.01%), Postives = 117/159 (73.58%), Query Frame = 1
Query:    1 GLTLDPAEAERSITRYLNLVGLGKFRKAYPHELSGGMRQRVAIARALATEPQLLLMDEPLAALDAQTRLVMQQELLRIWKETKSTVIYITHDIGEALMLADHVVVMTARPGRIKAVQDIPFGRD----RDVVEMRANPAFGRLESELWRLVAEEVGHSL 465
            GL LD AE +  I RY  LVGL  FR AYPHELSGGM+QR AIARALA EP++LLMDEPLAALDAQTRLVMQ EL  +W+ T+STV+Y+THDI EA+ LAD +VVM+ARPGRIK+ +      D     D V +RA+P F  L  +LW  +A+EVG +L
Sbjct:  125 GLRLDAAERKERIDRYSALVGLAAFRSAYPHELSGGMKQRAAIARALACEPRVLLMDEPLAALDAQTRLVMQAELQALWRRTESTVVYVTHDIEEAITLADRIVVMSARPGRIKSERRTDIHLDGADGADPVALRAHPGFAPLARDLWADLAQEVGDAL 283          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58756.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2M8U8S8_9PROT3.090e-7072.73ABC transporter domain-containing protein n=1 Tax=... [more]
UPI00131CC6BD8.460e-7070.97ABC transporter ATP-binding protein n=1 Tax=Acidis... [more]
A0A4Q3Y0E7_9PROT8.220e-6466.45ABC transporter ATP-binding protein n=1 Tax=Alphap... [more]
A0A7Y9JMX8_9MICO1.760e-5864.94ABC-type nitrate/sulfonate/bicarbonate transport s... [more]
UPI0007811C1E3.860e-5864.94ABC transporter ATP-binding protein n=2 Tax=unclas... [more]
UPI0018F1AB164.220e-5864.94ABC transporter ATP-binding protein n=1 Tax=Qaidam... [more]
A0A327UCA6_9ACTN2.910e-5761.39NitT/TauT family transport system ATP-binding prot... [more]
A0A6N7HWS2_9PSEU5.030e-5660.13ATP-binding cassette domain-containing protein n=1... [more]
A0A2V4AH91_9PSEU5.970e-5662.34NitT/TauT family transport system ATP-binding prot... [more]
UPI001BD0F2BE3.030e-5561.01ABC transporter ATP-binding protein n=1 Tax=Microm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58756contigP-wetherbeei_contig58756:14..502 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1120985.AUMI01000011_gene312
PFAMsABC_tran
Model size489
Max annot lvl909932|Negativicutes
KEGG koko:K02049
KEGG TC3.A.1.16,3.A.1.17
KEGG ModuleM00188
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.29e-49
EggNOG OGsCOG1116@1|root,COG1116@2|Bacteria,1TRM6@1239|Firmicutes,4H2GI@909932|Negativicutes
DescriptionABC transporter related
Cds size489
COG categoryP
BRITEko00000,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186869.1853411-CDS-P-wetherbeei_contig58756:13..5021683186869.1853411-CDS-P-wetherbeei_contig58756:13..502Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58756 14..502 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58756.1.1prot_P-wetherbeei_contig58756.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58756 14..502 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58756.1.1

>prot_P-wetherbeei_contig58756.1.1 ID=prot_P-wetherbeei_contig58756.1.1|Name=mRNA_P-wetherbeei_contig58756.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=163bp
GLTLDPAEAERSITRYLNLVGLGKFRKAYPHELSGGMRQRVAIARALATE
PQLLLMDEPLAALDAQTRLVMQQELLRIWKETKSTVIYITHDIGEALMLA
DHVVVMTARPGRIKAVQDIPFGRDRDVVEMRANPAFGRLESELWRLVAEE
VGHSLDKSNGAS*
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mRNA from alignment at P-wetherbeei_contig58756:14..502-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58756.1.1 ID=mRNA_P-wetherbeei_contig58756.1.1|Name=mRNA_P-wetherbeei_contig58756.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=489bp|location=Sequence derived from alignment at P-wetherbeei_contig58756:14..502- (Phaeothamnion wetherbeei SAG_119_79)
GGCCTGACCCTCGATCCCGCCGAGGCGGAGAGGAGCATCACGCGCTACCT CAACCTCGTCGGACTCGGCAAATTCCGCAAAGCCTACCCGCACGAGTTGT CGGGCGGTATGCGCCAGCGCGTCGCCATTGCGCGTGCGCTCGCCACCGAA CCGCAGTTGCTGCTGATGGACGAGCCGTTGGCCGCGCTCGATGCCCAGAC GCGCCTGGTGATGCAGCAGGAGCTGCTGCGGATCTGGAAAGAAACGAAAT CGACGGTGATCTACATCACCCACGACATCGGTGAGGCCTTGATGCTGGCC GACCATGTGGTGGTGATGACGGCGCGGCCCGGCCGCATCAAGGCGGTGCA GGACATTCCGTTCGGCCGTGACCGCGACGTCGTTGAAATGCGGGCCAACC CGGCGTTCGGCCGGCTCGAAAGCGAACTGTGGCGGCTGGTGGCGGAAGAG GTCGGTCATTCGCTCGATAAGTCGAACGGAGCTTCATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig58756:14..502-

>mRNA_P-wetherbeei_contig58756.1.1 ID=mRNA_P-wetherbeei_contig58756.1.1|Name=mRNA_P-wetherbeei_contig58756.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=489bp|location=Sequence derived from alignment at P-wetherbeei_contig58756:14..502- (Phaeothamnion wetherbeei SAG_119_79)
GGCCTGACCCTCGATCCCGCCGAGGCGGAGAGGAGCATCACGCGCTACCT
CAACCTCGTCGGACTCGGCAAATTCCGCAAAGCCTACCCGCACGAGTTGT
CGGGCGGTATGCGCCAGCGCGTCGCCATTGCGCGTGCGCTCGCCACCGAA
CCGCAGTTGCTGCTGATGGACGAGCCGTTGGCCGCGCTCGATGCCCAGAC
GCGCCTGGTGATGCAGCAGGAGCTGCTGCGGATCTGGAAAGAAACGAAAT
CGACGGTGATCTACATCACCCACGACATCGGTGAGGCCTTGATGCTGGCC
GACCATGTGGTGGTGATGACGGCGCGGCCCGGCCGCATCAAGGCGGTGCA
GGACATTCCGTTCGGCCGTGACCGCGACGTCGTTGAAATGCGGGCCAACC
CGGCGTTCGGCCGGCTCGAAAGCGAACTGTGGCGGCTGGTGGCGGAAGAG
GTCGGTCATTCGCTCGATAAGTCGAACGGAGCTTCATGA
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