mRNA_P-wetherbeei_contig58744.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58744.1.1
Unique NamemRNA_P-wetherbeei_contig58744.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig58744.1.1 vs. uniprot
Match: A0A521YWT6_9PROT (DUF3106 domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YWT6_9PROT)

HSP 1 Score: 73.2 bits (178), Expect = 7.610e-14
Identity = 31/53 (58.49%), Postives = 46/53 (86.79%), Query Frame = 1
Query:   28 AWAKLTSEQKSILAPLEREWDNLEPERRKRWIELATRYPGLPAERQQRIQKRM 186
            AWA+LT++Q+ ILAPL+ +WD+L PERR++WI +A RYPG+ A+ Q+R+Q+RM
Sbjct:   42 AWAELTADQQMILAPLKSDWDSLTPERRRKWIGIANRYPGMSAKEQERVQRRM 94          
BLAST of mRNA_P-wetherbeei_contig58744.1.1 vs. uniprot
Match: A0A537DP17_9PROT (DUF3106 domain-containing protein n=5 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A537DP17_9PROT)

HSP 1 Score: 67.8 bits (164), Expect = 6.950e-12
Identity = 28/53 (52.83%), Postives = 44/53 (83.02%), Query Frame = 1
Query:   28 AWAKLTSEQKSILAPLEREWDNLEPERRKRWIELATRYPGLPAERQQRIQKRM 186
            AWA+LT EQ+  LAPL+ +W++L+P+RR++WI +A RYPG+  + Q+R+Q+RM
Sbjct:   30 AWAELTVEQQHTLAPLKADWESLDPDRRRKWIGIAKRYPGMKPQEQERVQRRM 82          
BLAST of mRNA_P-wetherbeei_contig58744.1.1 vs. uniprot
Match: A0A1F4CW38_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CW38_9PROT)

HSP 1 Score: 67.0 bits (162), Expect = 1.010e-11
Identity = 28/52 (53.85%), Postives = 42/52 (80.77%), Query Frame = 1
Query:   31 WAKLTSEQKSILAPLEREWDNLEPERRKRWIELATRYPGLPAERQQRIQKRM 186
            WA+LT+EQ+ +LAPL+ +W+NL PERR++WI +A RYP +    Q+R+Q+RM
Sbjct:   33 WAQLTAEQQQVLAPLKVDWENLPPERRRKWIGIANRYPRMAQHEQERVQRRM 84          
BLAST of mRNA_P-wetherbeei_contig58744.1.1 vs. uniprot
Match: A0A1V5QX86_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium ADurb.Bin341 TaxID=1852821 RepID=A0A1V5QX86_9PROT)

HSP 1 Score: 67.4 bits (163), Expect = 2.370e-11
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 1
Query:   10 AETPGVAWAKLTSEQKSILAPLEREWDNLEPERRKRWIELATRYPGLPAERQQRIQKRM 186
            A  P  AW +L+S+Q+ ILAPL ++WD +E  RRK+W+ +A RYP +  E QQRIQKRM
Sbjct:   30 ATPPQPAWKQLSSDQRRILAPLSKDWDQMEHFRRKKWLGIAARYPKMDPEAQQRIQKRM 88          
BLAST of mRNA_P-wetherbeei_contig58744.1.1 vs. uniprot
Match: A0A2N8KR89_9BURK (Uncharacterized protein n=2 Tax=Paucibacter aquatile TaxID=2070761 RepID=A0A2N8KR89_9BURK)

HSP 1 Score: 68.2 bits (165), Expect = 4.940e-11
Identity = 30/52 (57.69%), Postives = 41/52 (78.85%), Query Frame = 1
Query:   31 WAKLTSEQKSILAPLEREWDNLEPERRKRWIELATRYPGLPAERQQRIQKRM 186
            W  L++ QK ILAPLER+WD L+  R+ +W+E+A R+PGLPAE Q R+Q+RM
Sbjct:   95 WTALSAAQKKILAPLERDWDGLDTGRKSKWLEVAQRFPGLPAEEQARMQERM 146          
BLAST of mRNA_P-wetherbeei_contig58744.1.1 vs. uniprot
Match: A0A383X5E2_9RHOO (Uncharacterized protein n=1 Tax=Rhodocyclales bacterium TaxID=2072421 RepID=A0A383X5E2_9RHOO)

HSP 1 Score: 67.0 bits (162), Expect = 5.160e-11
Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 1
Query:   28 AWAKLTSEQKSILAPLEREWDNLEPERRKRWIELATRYPGLPAERQQRIQKRM 186
            AW +LT EQK ILAPL R+WD +E  R+K+W+ +A RYPG+  + Q R+Q+RM
Sbjct:   31 AWVELTQEQKQILAPLARDWDKMEAFRKKKWLGIAKRYPGMKPQEQARVQRRM 83          
BLAST of mRNA_P-wetherbeei_contig58744.1.1 vs. uniprot
Match: A0A8I1PV75_9PROT (DUF3106 domain-containing protein n=1 Tax=Nitrosospira sp. TaxID=38080 RepID=A0A8I1PV75_9PROT)

HSP 1 Score: 64.7 bits (156), Expect = 8.100e-11
Identity = 28/59 (47.46%), Postives = 44/59 (74.58%), Query Frame = 1
Query:   10 AETPGVAWAKLTSEQKSILAPLEREWDNLEPERRKRWIELATRYPGLPAERQQRIQKRM 186
            AE+   +W +L  +Q+ ILAPL +EWD++EP ++K+W+ +A RYPG+  E QQR+Q +M
Sbjct:   22 AESKQPSWNQLMPQQREILAPLSQEWDHMEPAKKKKWLGIAKRYPGMTGEEQQRMQLQM 80          
BLAST of mRNA_P-wetherbeei_contig58744.1.1 vs. uniprot
Match: UPI0012FAC48B (DUF3106 domain-containing protein n=1 Tax=Mitsuaria sp. 7 TaxID=1658665 RepID=UPI0012FAC48B)

HSP 1 Score: 66.6 bits (161), Expect = 1.420e-10
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 1
Query:   16 TPGVA-----WAKLTSEQKSILAPLEREWDNLEPERRKRWIELATRYPGLPAERQQRIQKRM 186
            TPG       WA L++ QK  LAPL +EWD L+  R+ +W+E+A RYP LPAE QQR+++RM
Sbjct:   73 TPGTLTSSQNWASLSASQKEALAPLSKEWDQLDGARKGKWLEIAARYPTLPAEHQQRLRERM 134          
BLAST of mRNA_P-wetherbeei_contig58744.1.1 vs. uniprot
Match: UPI0020234FEB (DUF3106 domain-containing protein n=1 Tax=Aquincola tertiaricarbonis TaxID=391953 RepID=UPI0020234FEB)

HSP 1 Score: 66.2 bits (160), Expect = 1.560e-10
Identity = 29/55 (52.73%), Postives = 42/55 (76.36%), Query Frame = 1
Query:   22 GVAWAKLTSEQKSILAPLEREWDNLEPERRKRWIELATRYPGLPAERQQRIQKRM 186
            GV+W +LT  Q+S LAPLEREW  LEP R+++W+E+A R+P +PA  +  +Q+RM
Sbjct:   37 GVSWKQLTPAQRSALAPLEREWSALEPRRQEKWLEIAARFPNMPAAERTLMQERM 91          
BLAST of mRNA_P-wetherbeei_contig58744.1.1 vs. uniprot
Match: UPI00117DB5C1 (DUF3106 domain-containing protein n=1 Tax=Mitsuaria chitinivorans TaxID=2917965 RepID=UPI00117DB5C1)

HSP 1 Score: 65.9 bits (159), Expect = 1.620e-10
Identity = 29/54 (53.70%), Postives = 42/54 (77.78%), Query Frame = 1
Query:   25 VAWAKLTSEQKSILAPLEREWDNLEPERRKRWIELATRYPGLPAERQQRIQKRM 186
            V WA L++ QK  LAPL +EWD L+  R+ +W+E+A RYP LPAE+Q+R+++RM
Sbjct:   81 VNWASLSASQKEALAPLSKEWDQLDGARKGKWLEIAARYPTLPAEQQRRLRERM 134          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58744.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521YWT6_9PROT7.610e-1458.49DUF3106 domain-containing protein n=1 Tax=Betaprot... [more]
A0A537DP17_9PROT6.950e-1252.83DUF3106 domain-containing protein n=5 Tax=unclassi... [more]
A0A1F4CW38_9PROT1.010e-1153.85Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A1V5QX86_9PROT2.370e-1154.24Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A2N8KR89_9BURK4.940e-1157.69Uncharacterized protein n=2 Tax=Paucibacter aquati... [more]
A0A383X5E2_9RHOO5.160e-1154.72Uncharacterized protein n=1 Tax=Rhodocyclales bact... [more]
A0A8I1PV75_9PROT8.100e-1147.46DUF3106 domain-containing protein n=1 Tax=Nitrosos... [more]
UPI0012FAC48B1.420e-1051.61DUF3106 domain-containing protein n=1 Tax=Mitsuari... [more]
UPI0020234FEB1.560e-1052.73DUF3106 domain-containing protein n=1 Tax=Aquincol... [more]
UPI00117DB5C11.620e-1053.70DUF3106 domain-containing protein n=1 Tax=Mitsuari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58744contigP-wetherbeei_contig58744:119..493 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1121035.AUCH01000007_gene565
PFAMsDUF3106
Model size375
Max annot lvl206389|Rhodocyclales
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.87e-10
EggNOG OGs2E3UK@1|root,32YRY@2|Bacteria,1N74J@1224|Proteobacteria,2VVQ2@28216|Betaproteobacteria,2KX7S@206389|Rhodocyclales
DescriptionProtein of unknown function (DUF3106)
Cds size375
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186869.0185463-CDS-P-wetherbeei_contig58744:118..4931683186869.0185463-CDS-P-wetherbeei_contig58744:118..493Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58744 119..493 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58744.1.1prot_P-wetherbeei_contig58744.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58744 119..493 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58744.1.1

>prot_P-wetherbeei_contig58744.1.1 ID=prot_P-wetherbeei_contig58744.1.1|Name=mRNA_P-wetherbeei_contig58744.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp
AAHAETPGVAWAKLTSEQKSILAPLEREWDNLEPERRKRWIELATRYPGL
PAERQQRIQKRMQEWVSLTPEQRDQARERYKRLKQLPPGKNNQLHERWRE
YQGLPEEQRQKLREDRATPAPAGK*
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mRNA from alignment at P-wetherbeei_contig58744:119..493-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58744.1.1 ID=mRNA_P-wetherbeei_contig58744.1.1|Name=mRNA_P-wetherbeei_contig58744.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig58744:119..493- (Phaeothamnion wetherbeei SAG_119_79)
GCGGCCCATGCGGAGACGCCCGGCGTCGCCTGGGCGAAACTGACCTCCGA GCAGAAATCCATCCTTGCACCGCTCGAGCGGGAGTGGGACAACCTGGAGC CGGAACGACGCAAGCGCTGGATCGAGCTTGCGACCCGCTATCCTGGCCTG CCCGCGGAACGCCAGCAACGCATCCAGAAACGCATGCAAGAGTGGGTCTC GCTGACCCCCGAGCAACGCGATCAGGCGCGCGAGCGCTACAAGCGCCTGA AGCAACTTCCTCCGGGGAAAAACAACCAATTGCACGAGCGCTGGCGTGAG TACCAGGGCCTGCCGGAAGAGCAGCGGCAGAAACTGCGCGAGGACCGCGC GACCCCGGCACCGGCAGGCAAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig58744:119..493-

>mRNA_P-wetherbeei_contig58744.1.1 ID=mRNA_P-wetherbeei_contig58744.1.1|Name=mRNA_P-wetherbeei_contig58744.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig58744:119..493- (Phaeothamnion wetherbeei SAG_119_79)
GCGGCCCATGCGGAGACGCCCGGCGTCGCCTGGGCGAAACTGACCTCCGA
GCAGAAATCCATCCTTGCACCGCTCGAGCGGGAGTGGGACAACCTGGAGC
CGGAACGACGCAAGCGCTGGATCGAGCTTGCGACCCGCTATCCTGGCCTG
CCCGCGGAACGCCAGCAACGCATCCAGAAACGCATGCAAGAGTGGGTCTC
GCTGACCCCCGAGCAACGCGATCAGGCGCGCGAGCGCTACAAGCGCCTGA
AGCAACTTCCTCCGGGGAAAAACAACCAATTGCACGAGCGCTGGCGTGAG
TACCAGGGCCTGCCGGAAGAGCAGCGGCAGAAACTGCGCGAGGACCGCGC
GACCCCGGCACCGGCAGGCAAGTGA
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