mRNA_P-wetherbeei_contig5872.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5872.2.1
Unique NamemRNA_P-wetherbeei_contig5872.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5872.2.1 vs. uniprot
Match: A0A0L9V6I9_PHAAN (Uncharacterized protein n=11 Tax=NPAAA clade TaxID=2231382 RepID=A0A0L9V6I9_PHAAN)

HSP 1 Score: 174 bits (440), Expect = 7.110e-51
Identity = 90/182 (49.45%), Postives = 123/182 (67.58%), Query Frame = 1
Query:   10 FLPPYSSAFDSGANINPAVSFALVLGKRITPFRGILYVIAQLAGASCGTLVAKQMSPDLFSEAGGGANSPAVG--KAQAFGAEVIGTFLLVTTVLMATNAYVGTKISHIPMQLPLAIGFSVFVAHCALIPIDGCSINPARSFGPALVHD---FWEDQWIFWLGPLTGAAIATFTFEGMFRLA 540
            F+  Y +A  SG +INPAV+F L LG++++  R +LY++AQ AGA CGT +AK      ++  GGGANS A G  K  A GAE+IGTF+LV TV  AT+     + SH+P+  PL IGF+VF+ H A IP+ G  INPARSFG A++++    W+DQWIFW+GP+ GAA+A F  + + R A
Sbjct:   92 FILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCAGAICGTGLAKGFQTAYYNRYGGGANSVADGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIYNDDKIWDDQWIFWVGPIVGAAVAAFYHQYILRAA 273          
BLAST of mRNA_P-wetherbeei_contig5872.2.1 vs. uniprot
Match: A0A4D6LIR9_VIGUN (Aquaporin PIP n=1 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6LIR9_VIGUN)

HSP 1 Score: 173 bits (438), Expect = 1.460e-50
Identity = 91/182 (50.00%), Postives = 122/182 (67.03%), Query Frame = 1
Query:   10 FLPPYSSAFDSGANINPAVSFALVLGKRITPFRGILYVIAQLAGASCGTLVAKQMSPDLFSEAGGGANSPAVG--KAQAFGAEVIGTFLLVTTVLMATNAYVGTKISHIPMQLPLAIGFSVFVAHCALIPIDGCSINPARSFGPALVHD---FWEDQWIFWLGPLTGAAIATFTFEGMFRLA 540
            F+  Y +A  SG +INPAV+F L LG++++  R +LY++AQ AGA CGT +AK      F+  GGGANS A G  K  A GAE+IGTF+LV TV  AT+     + S+IP+  PL IGF+VFV H A IP+ G  INPARSFG A++++    W+DQWIFW+GP+ GAA+A    + + R A
Sbjct:   93 FILVYCTASISGGHINPAVTFGLFLGRKVSLIRALLYILAQCAGAICGTGLAKGFQKAYFNRYGGGANSVADGYNKGTALGAEIIGTFVLVYTVFSATDPKKNARDSYIPVLAPLPIGFAVFVVHLATIPVTGTGINPARSFGAAVIYNDQKIWDDQWIFWVGPIVGAAVAALYHQYILRAA 274          
BLAST of mRNA_P-wetherbeei_contig5872.2.1 vs. uniprot
Match: E0A2W0_SOYBN (Plasma membrane intrinsic protein n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=E0A2W0_SOYBN)

HSP 1 Score: 172 bits (436), Expect = 2.920e-50
Identity = 90/182 (49.45%), Postives = 122/182 (67.03%), Query Frame = 1
Query:   10 FLPPYSSAFDSGANINPAVSFALVLGKRITPFRGILYVIAQLAGASCGTLVAKQMSPDLFSEAGGGANSPAVG--KAQAFGAEVIGTFLLVTTVLMATNAYVGTKISHIPMQLPLAIGFSVFVAHCALIPIDGCSINPARSFGPALVHD---FWEDQWIFWLGPLTGAAIATFTFEGMFRLA 540
            F+  Y +A  SG +INPAV+F L LG++++  R +LY++AQ AGA CGT +AK      ++  GGGANS A G     A GAE+IGTF+LV TV  AT+     + SH+P+  PL IGF+VF+ H A IPI G  INPARSFG A++++    W+DQWIFW+GP+ GAA+A F  + + R A
Sbjct:   93 FILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCAGAICGTGLAKGFQKAYYNRYGGGANSVADGYNNGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNEDKIWDDQWIFWVGPIVGAAVAAFYHQYILRAA 274          
BLAST of mRNA_P-wetherbeei_contig5872.2.1 vs. uniprot
Match: A0A1S3TCW1_VIGRR (aquaporin PIP2-7-like n=5 Tax=Vigna TaxID=3913 RepID=A0A1S3TCW1_VIGRR)

HSP 1 Score: 168 bits (426), Expect = 7.500e-49
Identity = 88/180 (48.89%), Postives = 120/180 (66.67%), Query Frame = 1
Query:   10 FLPPYSSAFDSGANINPAVSFALVLGKRITPFRGILYVIAQLAGASCGTLVAKQMSPDLFSEAGGGANSPAVG--KAQAFGAEVIGTFLLVTTVLMATNAYVGTKISHIPMQLPLAIGFSVFVAHCALIPIDGCSINPARSFGPALVHD---FWEDQWIFWLGPLTGAAIATFTFEGMFR 534
            F+  Y +A  SG +INPAV+F L LG++++  R +LY++AQ AGA CGT +AK      ++  GGGAN  A G  K  A GAE+IGTF+LV TV  AT+     + S+IP+  PL IGF+VFV H A IP+ G  INPARSFG A++++    W+DQWIFW+GP+ GAA+A    + + R
Sbjct:   85 FILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYIVAQCAGAICGTGLAKVFQKTYYNRYGGGANFVADGCNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSYIPVLAPLPIGFAVFVVHLATIPVTGTGINPARSFGAAVIYNDEKIWDDQWIFWVGPIVGAAVAALYHQYILR 264          
BLAST of mRNA_P-wetherbeei_contig5872.2.1 vs. uniprot
Match: A0A145PR54_9CARY (Aquaporin PIP n=1 Tax=Tamarix hispida TaxID=189793 RepID=A0A145PR54_9CARY)

HSP 1 Score: 168 bits (426), Expect = 8.600e-49
Identity = 87/180 (48.33%), Postives = 117/180 (65.00%), Query Frame = 1
Query:   10 FLPPYSSAFDSGANINPAVSFALVLGKRITPFRGILYVIAQLAGASCGTLVAKQMSPDLFSEAGGGAN--SPAVGKAQAFGAEVIGTFLLVTTVLMATNAYVGTKISHIPMQLPLAIGFSVFVAHCALIPIDGCSINPARSFGPALVHD---FWEDQWIFWLGPLTGAAIATFTFEGMFR 534
            F+  Y +A  SG +INPAV+F L L ++++  R + Y++AQ  GA CGT +AK      + + GGG N  S    K    GAE+IGTF+LV TV  AT+     + SHIP+  PL IGF+VF+ H AL+PIDGC INPARSFG A++++    W+DQWIFW+GP  GAAIA F  + + R
Sbjct:   88 FVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVSYMVAQCLGAICGTGLAKSFQKAYYDKYGGGTNGLSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFIVHLALLPIDGCGINPARSFGAAVIYNGQKAWDDQWIFWVGPFIGAAIAAFYHQFILR 267          
BLAST of mRNA_P-wetherbeei_contig5872.2.1 vs. uniprot
Match: A0A8K0H715_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0H715_9ROSA)

HSP 1 Score: 167 bits (424), Expect = 1.630e-48
Identity = 86/176 (48.86%), Postives = 115/176 (65.34%), Query Frame = 1
Query:   10 FLPPYSSAFDSGANINPAVSFALVLGKRITPFRGILYVIAQLAGASCGTLVAKQMSPDLFSEAGGGANS--PAVGKAQAFGAEVIGTFLLVTTVLMATNAYVGTKISHIPMQLPLAIGFSVFVAHCALIPIDGCSINPARSFGPALVHD---FWEDQWIFWLGPLTGAAIATFTFE 522
            F+  YS+A  SG +INPAV+F L L ++++  R ++Y++AQ  GA CG  + K +  D ++  GGGAN+  P   K  A GAE++GTFLLV TV  AT+     + SH+P+  PL IGF+VFV H A IPI G  INPARSFGPA++ +    W+DQWIFW+GP  GA  A F  E
Sbjct:   87 FILVYSTAGISGGHINPAVTFGLFLSRKVSLIRAVVYMVAQCLGAICGAGLVKGVMEDYYNALGGGANTVNPTYSKGTALGAEIVGTFLLVYTVYSATDPKRNARDSHVPVLAPLPIGFAVFVVHLATIPITGTGINPARSFGPAVIFNKEKVWDDQWIFWVGPFVGALAAAFYHE 262          
BLAST of mRNA_P-wetherbeei_contig5872.2.1 vs. uniprot
Match: UPI0010A3BC1F (aquaporin PIP2-7-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A3BC1F)

HSP 1 Score: 167 bits (422), Expect = 3.630e-48
Identity = 86/180 (47.78%), Postives = 118/180 (65.56%), Query Frame = 1
Query:   10 FLPPYSSAFDSGANINPAVSFALVLGKRITPFRGILYVIAQLAGASCGTLVAKQMSPDLFSEAGGGANSPAVG--KAQAFGAEVIGTFLLVTTVLMATNAYVGTKISHIPMQLPLAIGFSVFVAHCALIPIDGCSINPARSFGPALVHD---FWEDQWIFWLGPLTGAAIATFTFEGMFR 534
            F+  Y +A  SG +INPAV+F L +G++++  R +LY++AQ+AGA CGT +AK      +   GGGANS   G  K  A GAE+IGTF+LV TV  AT+     + SH+P+  PL IGF+VF+ H A IP+ G  INPARSFG A++++    W+D WIFW+GP+ GAA A    E + R
Sbjct:   92 FILVYCTAGISGGHINPAVTFGLFVGRKVSLIRAVLYILAQMAGAICGTGLAKGFQTAYYDRYGGGANSVQEGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIYNNDKIWDDHWIFWVGPIIGAAAAAIYHEHILR 271          
BLAST of mRNA_P-wetherbeei_contig5872.2.1 vs. uniprot
Match: A0A6P4CKJ2_ARADU (aquaporin PIP2-7 n=3 Tax=Arachis TaxID=3817 RepID=A0A6P4CKJ2_ARADU)

HSP 1 Score: 167 bits (422), Expect = 4.260e-48
Identity = 86/180 (47.78%), Postives = 116/180 (64.44%), Query Frame = 1
Query:   10 FLPPYSSAFDSGANINPAVSFALVLGKRITPFRGILYVIAQLAGASCGTLVAKQMSPDLFSEAGGGAN--SPAVGKAQAFGAEVIGTFLLVTTVLMATNAYVGTKISHIPMQLPLAIGFSVFVAHCALIPIDGCSINPARSFGPALVHD---FWEDQWIFWLGPLTGAAIATFTFEGMFR 534
            F+  Y +A  SG +INPAV+F L LG++++  R +LY++AQ AGA CGT +AK      F   GGGAN   P   K  A GAE+IGTF+LV TV  AT+     + SH+P+  PL IGF+VF+ H A IP+ G  INPARSFG A++++    W+D WIFW+GP+ GAA A    E + +
Sbjct:   98 FILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYIVAQCAGAICGTGLAKGFQKAYFDRYGGGANYVHPGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIYNKDKIWDDHWIFWVGPILGAAAAAIYHEHIIK 277          
BLAST of mRNA_P-wetherbeei_contig5872.2.1 vs. uniprot
Match: A0A1Y1HU13_KLENI (Aquaporin n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HU13_KLENI)

HSP 1 Score: 167 bits (424), Expect = 6.050e-48
Identity = 91/185 (49.19%), Postives = 124/185 (67.03%), Query Frame = 1
Query:    1 LVAFLPPYSSAFDSGANINPAVSFALVLGKRITPFRGILYVIAQLAGASCGTLVAKQMSPDLFSEAGGGANSPAVGKAQ--AFGAEVIGTFLLVTTVLMATNAYVGT-KIS-HIPMQLPLAIGFSVFVAHCALIPIDGCSINPARSFGPALVHD---FWEDQWIFWLGPLTGAAIATFTFEGMFR 534
            +  F+  YSSA  SG +INPAV+FA+ L  RI   +G+LY+ AQ+ GA CG  + ++++  L++   GG N    G     AF AEVIGTF+L+ T+  AT+      ++S H+ +  PLAIGFS+FV H ALIP+DG SINPARSFGPA+V +    W+D WIFW+GPLTGA +ATF +E + R
Sbjct:  135 ITIFVLVYSSAGLSGGHINPAVTFAMFLAGRIDVIKGLLYMCAQVVGAICGAAIVREINTPLYNRVYGGCNFVQSGYTVGGAFSAEVIGTFVLIYTIFAATDPKRSALEVSPHLGVLAPLAIGFSIFVVHIALIPVDGVSINPARSFGPAVVLNDSHIWKDMWIFWVGPLTGAILATFVYEAVIR 319          
BLAST of mRNA_P-wetherbeei_contig5872.2.1 vs. uniprot
Match: A0A834FZA7_RHOSS (Uncharacterized protein n=4 Tax=Rhododendron TaxID=4346 RepID=A0A834FZA7_RHOSS)

HSP 1 Score: 166 bits (420), Expect = 6.500e-48
Identity = 88/182 (48.35%), Postives = 116/182 (63.74%), Query Frame = 1
Query:   10 FLPPYSSAFDSGANINPAVSFALVLGKRITPFRGILYVIAQLAGASCGTLVAKQMSPDLFSEAGGGANSPAVG--KAQAFGAEVIGTFLLVTTVLMATNAYVGTKISHIPMQLPLAIGFSVFVAHCALIPIDGCSINPARSFGPALVHD---FWEDQWIFWLGPLTGAAIATFTFEGMFRLA 540
            F+  Y +A  SG +INPAV+F L L ++++  R +LY++AQ  GA CG  + K      F   GGGAN  A G  K  A GAE+IGTF+LV TV  AT+     + SH+P+  PL IGF+VF+ H A IPI G  INPARSFG A++++    W+DQWIFW+GP  GAAIA F  + + R A
Sbjct:   88 FILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGLVKGFQKSYFDRYGGGANEVASGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNQSKAWDDQWIFWVGPFAGAAIAAFYHQFVLRAA 269          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5872.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0L9V6I9_PHAAN7.110e-5149.45Uncharacterized protein n=11 Tax=NPAAA clade TaxID... [more]
A0A4D6LIR9_VIGUN1.460e-5050.00Aquaporin PIP n=1 Tax=Vigna unguiculata TaxID=3917... [more]
E0A2W0_SOYBN2.920e-5049.45Plasma membrane intrinsic protein n=2 Tax=Glycine ... [more]
A0A1S3TCW1_VIGRR7.500e-4948.89aquaporin PIP2-7-like n=5 Tax=Vigna TaxID=3913 Rep... [more]
A0A145PR54_9CARY8.600e-4948.33Aquaporin PIP n=1 Tax=Tamarix hispida TaxID=189793... [more]
A0A8K0H715_9ROSA1.630e-4848.86Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]
UPI0010A3BC1F3.630e-4847.78aquaporin PIP2-7-like n=1 Tax=Prosopis alba TaxID=... [more]
A0A6P4CKJ2_ARADU4.260e-4847.78aquaporin PIP2-7 n=3 Tax=Arachis TaxID=3817 RepID=... [more]
A0A1Y1HU13_KLENI6.050e-4849.19Aquaporin n=1 Tax=Klebsormidium nitens TaxID=10523... [more]
A0A834FZA7_RHOSS6.500e-4848.35Uncharacterized protein n=4 Tax=Rhododendron TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5872contigP-wetherbeei_contig5872:2643..3182 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog3885.XP_007132257.1
PFAMsMIP
Model size540
Max annot lvl35493|Streptophyta
KEGG koko:K09872
KEGG TC1.A.8,1.A.8.11
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005372,GO:0005575,GO:0006810,GO:0006833,GO:0008150,GO:0015250,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0022803,GO:0022838,GO:0022857,GO:0031224,GO:0042044,GO:0044425,GO:0051179,GO:0051234,GO:0055085
Exons1
Evalue8.24e-52
EggNOG OGsCOG0580@1|root,KOG0223@2759|Eukaryota,37I73@33090|Viridiplantae,3G7V9@35493|Streptophyta,4JTMH@91835|fabids
DescriptionBelongs to the MIP aquaporin (TC 1.A.8) family
Cds size540
COG categoryP
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186868.7405512-CDS-P-wetherbeei_contig5872:2642..31821683186868.7405512-CDS-P-wetherbeei_contig5872:2642..3182Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5872 2643..3182 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5872.2.1prot_P-wetherbeei_contig5872.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5872 2643..3182 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5872.2.1

>prot_P-wetherbeei_contig5872.2.1 ID=prot_P-wetherbeei_contig5872.2.1|Name=mRNA_P-wetherbeei_contig5872.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp
LVAFLPPYSSAFDSGANINPAVSFALVLGKRITPFRGILYVIAQLAGASC
GTLVAKQMSPDLFSEAGGGANSPAVGKAQAFGAEVIGTFLLVTTVLMATN
AYVGTKISHIPMQLPLAIGFSVFVAHCALIPIDGCSINPARSFGPALVHD
FWEDQWIFWLGPLTGAAIATFTFEGMFRLA
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mRNA from alignment at P-wetherbeei_contig5872:2643..3182+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5872.2.1 ID=mRNA_P-wetherbeei_contig5872.2.1|Name=mRNA_P-wetherbeei_contig5872.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig5872:2643..3182+ (Phaeothamnion wetherbeei SAG_119_79)
CTCGTTGCATTCCTCCCGCCTTACTCCTCCGCCTTCGACAGCGGCGCCAA TATCAACCCGGCGGTCTCGTTCGCCCTGGTGCTCGGCAAGCGCATCACGC CCTTCCGCGGCATCCTTTACGTCATCGCGCAGCTCGCCGGAGCCTCGTGC GGCACGCTGGTCGCCAAGCAGATGAGCCCAGATCTCTTCAGCGAGGCGGG CGGCGGCGCCAACTCCCCCGCCGTCGGCAAGGCGCAGGCTTTCGGCGCTG AAGTGATAGGCACCTTCTTGCTGGTGACGACGGTGCTCATGGCGACCAAC GCATACGTGGGCACCAAGATCTCGCACATCCCCATGCAGCTGCCGCTCGC TATCGGCTTCTCTGTCTTCGTCGCCCACTGCGCGCTCATCCCCATTGACG GGTGCTCCATCAACCCGGCGCGATCATTTGGCCCAGCGCTTGTGCACGAC TTTTGGGAGGACCAGTGGATATTCTGGCTGGGGCCACTGACCGGCGCCGC CATTGCAACCTTCACGTTCGAGGGCATGTTCCGCCTCGCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5872:2643..3182+

>mRNA_P-wetherbeei_contig5872.2.1 ID=mRNA_P-wetherbeei_contig5872.2.1|Name=mRNA_P-wetherbeei_contig5872.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig5872:2643..3182+ (Phaeothamnion wetherbeei SAG_119_79)
CTCGTTGCATTCCTCCCGCCTTACTCCTCCGCCTTCGACAGCGGCGCCAA
TATCAACCCGGCGGTCTCGTTCGCCCTGGTGCTCGGCAAGCGCATCACGC
CCTTCCGCGGCATCCTTTACGTCATCGCGCAGCTCGCCGGAGCCTCGTGC
GGCACGCTGGTCGCCAAGCAGATGAGCCCAGATCTCTTCAGCGAGGCGGG
CGGCGGCGCCAACTCCCCCGCCGTCGGCAAGGCGCAGGCTTTCGGCGCTG
AAGTGATAGGCACCTTCTTGCTGGTGACGACGGTGCTCATGGCGACCAAC
GCATACGTGGGCACCAAGATCTCGCACATCCCCATGCAGCTGCCGCTCGC
TATCGGCTTCTCTGTCTTCGTCGCCCACTGCGCGCTCATCCCCATTGACG
GGTGCTCCATCAACCCGGCGCGATCATTTGGCCCAGCGCTTGTGCACGAC
TTTTGGGAGGACCAGTGGATATTCTGGCTGGGGCCACTGACCGGCGCCGC
CATTGCAACCTTCACGTTCGAGGGCATGTTCCGCCTCGCT
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