mRNA_P-wetherbeei_contig58695.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58695.1.1
Unique NamemRNA_P-wetherbeei_contig58695.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig58695.1.1 vs. uniprot
Match: A0A7V1V139_9BACT (Uncharacterized protein n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A7V1V139_9BACT)

HSP 1 Score: 153 bits (387), Expect = 1.830e-41
Identity = 81/168 (48.21%), Postives = 108/168 (64.29%), Query Frame = 1
Query:    1 VMGGSMAGLLAARVLADYHDRVTIIERDSVGEWAEPRKGTPQDRHVHGFWARGLETVERLFPGVTAELHGGGAVPGDAVGDVNWHQFGGLKLRTPTGIGATLMTRPFLESHVRRRTLALPTISMRSGATVTDLTTSEEHRQVSGVYVLGAGGAREA-IEADLVVDATG 501
            V+G S+AGLLAARVL+D+  +VT+IERD +    EPRKG PQ  H+H   ARG + + RLFPG+TA+L  GGAVP D   D+ W+QFG  K+R P+ +     +RPFLE H+R R L+L  +  RS A V  +  + + R+V+GV V     A E  +   LVVDATG
Sbjct:   15 VIGASIAGLLAARVLSDHFAKVTLIERDRLSASWEPRKGVPQGCHIHALLARGEQVLSRLFPGLTADLLAGGAVPVDLANDIRWYQFGSFKVRFPSSLVGLCQSRPFLEGHIRHRVLSLKNVGCRSEAEVLGVLATSDGRRVTGVRVRDRHSAGETCLYGSLVVDATG 182          
BLAST of mRNA_P-wetherbeei_contig58695.1.1 vs. uniprot
Match: UPI001C688C29 (FAD-binding monooxygenase n=1 Tax=Sphaerisporangium album TaxID=509200 RepID=UPI001C688C29)

HSP 1 Score: 152 bits (383), Expect = 1.190e-40
Identity = 81/167 (48.50%), Postives = 106/167 (63.47%), Query Frame = 1
Query:    1 VMGGSMAGLLAARVLADYHDRVTIIERDSVGEWAEPRKGTPQDRHVHGFWARGLETVERLFPGVTAELHGGGAVPGDAVGDVNWHQFGGLKLRTPTGIGATLMTRPFLESHVRRRTLALPTISMRSGATVTDLTTSEEHRQVSGVYVLGAGGAREAIEADLVVDATG 501
            V+GGSMAGLLAARVLA+++D+VTI+ERD +   A  R+G PQ  HVH   ARG + ++ LFPG+TAE+   GA  GD +G + W   G    R   G      +RP LE+HVR R LALP + +  G  +  LTT+ + R V+GV + G GG    I ADLVVDA+G
Sbjct:    8 VLGGSMAGLLAARVLAEFYDKVTIVERDVLPRGAAQRRGVPQGHHVHALLARGGQVLDELFPGLTAEVVAAGAPAGDLLGGIRWLLSGHRISRVDIGQPVLFPSRPLLEAHVRARVLALPGLRLCDGHDIAGLTTTADRRTVNGVTMRGPGGELRGIPADLVVDASG 174          
BLAST of mRNA_P-wetherbeei_contig58695.1.1 vs. uniprot
Match: A0A540VJX9_9CHLR (FAD-binding protein n=1 Tax=Litorilinea aerophila TaxID=1204385 RepID=A0A540VJX9_9CHLR)

HSP 1 Score: 151 bits (381), Expect = 1.390e-40
Identity = 81/169 (47.93%), Postives = 112/169 (66.27%), Query Frame = 1
Query:    1 VMGGSMAGLLAARVLADYHDRVTIIERDSVGEWAEPRKGTPQDRHVHGFWARGLETVERLFPGVTAELHGGGAVPGDAVGDVNWHQFGGLKLRTPTGIGATLMTRPFLESHVRRRTLALPTISMRSGATVTDLTTSEEHRQVSGVYVLGAGG--AREAIEADLVVDATG 501
            V+G SMAGLLAARVL+++ D+VT++ERD V +  + RKG PQ RH+HG  A GL+T+ + +PG+  EL   GA+ GD    ++W  +GG +LR   G+ A  M+RP LE  VRRRTLA P I+++    V  + T+ +  +V GV V   GG  AR+ + ADLVVDATG
Sbjct:   13 VLGASMAGLLAARVLSEHFDQVTLLERDEVWDEPQSRKGQPQTRHLHGILASGLQTLNQYYPGLADELAEHGAMVGDMAETMHWFSYGGFRLRFRMGLPAATMSRPLLEYVVRRRTLARPNITLQDNTAVRGVVTTGDRTRVIGVEVEERGGSAARKTLHADLVVDATG 181          
BLAST of mRNA_P-wetherbeei_contig58695.1.1 vs. uniprot
Match: UPI0005EB2E3D (FAD-dependent monooxygenase n=1 Tax=Deinococcus pimensis TaxID=309888 RepID=UPI0005EB2E3D)

HSP 1 Score: 150 bits (378), Expect = 3.400e-40
Identity = 83/167 (49.70%), Postives = 101/167 (60.48%), Query Frame = 1
Query:    1 VMGGSMAGLLAARVLADYHDRVTIIERDSVGEWAEPRKGTPQDRHVHGFWARGLETVERLFPGVTAELHGGGAVPGDAVGDVNWHQFGGLKLRTPTGIGATLMTRPFLESHVRRRTLALPTISMRSGATVTDLTTSEEHRQVSGVYVLGAGGAREAIEADLVVDATG 501
            V+G SMAGLLAA VLA +HD VTI+ERD +G+   PRKG PQ RH H   A GL  +ERL PG TA+L  GGAV GD +GDV  +Q G  + R  +GI    MTRPFLE  VRRR L+   + +  G  VT      E  +V GV++    G    + A LVVDA G
Sbjct:   11 VLGASMAGLLAASVLARHHDTVTIVERDRLGDTPTPRKGVPQGRHAHALLAGGLRAIERLLPGATADLIAGGAVKGDLIGDVKINQAGTYRPRVRSGIDLLCMTRPFLELVVRRRVLSAGNVRLLEGVAVTGFV--HEDDRVVGVHLTNPAGGPSVLRAQLVVDAMG 175          
BLAST of mRNA_P-wetherbeei_contig58695.1.1 vs. uniprot
Match: A0A7Y5BY50_9CHLR (FAD-dependent monooxygenase n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A7Y5BY50_9CHLR)

HSP 1 Score: 149 bits (377), Expect = 4.920e-40
Identity = 80/168 (47.62%), Postives = 109/168 (64.88%), Query Frame = 1
Query:    1 VMGGSMAGLLAARVLADYHDRVTIIERDSVGEWAEPRKGTPQDRHVHGFWARGLETVERLFPGVTAELHGGGAVPGDAVGDVNWHQFGGLKLRTPTGIGATLMTRPFLESHVRRRTLALPTISMRSGATVTDLTTSEEHRQVSGVYVLGAG-GAREAIEADLVVDATG 501
            V+GGSMAGLLAARVL+D+ +RVTI+ERD+V    E RKG PQ +H+HG  A GL+ + R FP +   L  GGA+ GD  G +NW+ +GG + +   G+ AT M+RP LES VR R +ALP +++     V  L T+ +  QV+GV V   G G    + A+LVVD +G
Sbjct:   11 VIGGSMAGLLAARVLSDHFNRVTILERDTVSPEPESRKGQPQTQHLHGLLATGLQVMTRYFPDLPKALLDGGAMMGDFAGVMNWYSYGGYRKQFEMGVNATTMSRPLLESLVRARVVALPNVTLMDNTAVKQLLTTPDRNQVTGVEVEARGNGQTTQLLANLVVDVSG 178          
BLAST of mRNA_P-wetherbeei_contig58695.1.1 vs. uniprot
Match: C1AR59_RHOOB (FAD_binding_3 domain-containing protein n=12 Tax=Rhodococcus TaxID=1827 RepID=C1AR59_RHOOB)

HSP 1 Score: 148 bits (374), Expect = 1.260e-39
Identity = 81/169 (47.93%), Postives = 103/169 (60.95%), Query Frame = 1
Query:    1 VMGGSMAGLLAARVLADYHDRVTIIERDSVGEWAEPRKGTPQDRHVHGFWARGLETVERLFPGVTAELHGGGAVPGDAVGDVNWHQFGGLKLRTPTGIGATLMTRPFLESHVRRRTLALPTISMRSGATVTDLTTSEEHRQVSGVYVLG--AGGAREAIEADLVVDATG 501
            V+GGS+AGLLA+RVLADY D VTI E+D + + AEPR G PQ RHVH  W RGL  +E  FPG+T+EL  GG+   +   D  W+  G  KLR P+GI  T  TRPFLE  +RRR   +  I +     V    T    ++++GV V    AG   E + ADLVVDA+G
Sbjct:   12 VIGGSIAGLLASRVLADYFDTVTIFEKDHLVDSAEPRMGVPQGRHVHSIWKRGLSLMEESFPGLTSELIEGGSAEVEMTKDFAWYHRGVWKLRVPSGIFITCQTRPFLEWQIRRRVCQISNIDLVDHCHVKRFVTDATAQRITGVAVQSRRAGATEETVSADLVVDASG 180          
BLAST of mRNA_P-wetherbeei_contig58695.1.1 vs. uniprot
Match: A0A533J7N6_9BRAD (Monooxygenase (Fragment) n=1 Tax=Bradyrhizobium icense TaxID=1274631 RepID=A0A533J7N6_9BRAD)

HSP 1 Score: 140 bits (354), Expect = 2.150e-39
Identity = 79/167 (47.31%), Postives = 95/167 (56.89%), Query Frame = 1
Query:    1 VMGGSMAGLLAARVLADYHDRVTIIERDSVGEWAEPRKGTPQDRHVHGFWARGLETVERLFPGVTAELHGGGAVPGDAVGDVNWHQFGGLKLRTPTGIGATLMTRPFLESHVRRRTLALPTISMRSGATVTDLTTSEEHRQVSGVYVLGAGGAREAIEADLVVDATG 501
            V+G SMAGLLAAR LAD++  VT++ERD+      PRKG PQ RH HG  ARG   +ER FPG T E+   G   GD  GDVNW   G      P+ +   L +RP LE HVRRR LALP +       V  L   E+   V GV V   G   + I+ DLVVDA+G
Sbjct:   10 VIGASMAGLLAARALADFYGTVTVLERDAFPVSDIPRKGVPQGRHAHGLLARGRSVIERFFPGWTDEVVAAGGALGDIAGDVNWVGHGVTLRSAPSDLVGLLASRPVLEGHVRRRLLALPNVRAVENCAVQGLLAGEDRAAVKGVRVR-IGAIEQVIDTDLVVDASG 175          
BLAST of mRNA_P-wetherbeei_contig58695.1.1 vs. uniprot
Match: UPI0018E52216 (FAD-binding monooxygenase n=1 Tax=Nocardiopsis sp. FIRDI 009 TaxID=714197 RepID=UPI0018E52216)

HSP 1 Score: 147 bits (372), Expect = 2.950e-39
Identity = 80/168 (47.62%), Postives = 106/168 (63.10%), Query Frame = 1
Query:    1 VMGGSMAGLLAARVLADYHDRVTIIERDSVGEWAEPRKGTPQDRHVHGFWARGLETVERLFPGVTAELHGGGAVPGDAVGDVNWHQFGGLKLR-TPTGIGATLMTRPFLESHVRRRTLALPTISMRSGATVTDLTTSEEHRQVSGVYVLGAGGAREAIEADLVVDATG 501
            V+GGSMAGLLAAR L+D    V +++RD + +   PR+G PQ RH HG  A+G + +E LFPG+T EL G G   GD  GD+ W+ FGG ++R T +G+ +   TRP LE  VRRR  A+P +  R+G ++  L T    R+V G  V   GG    +EADLVVDATG
Sbjct:   15 VLGGSMAGLLAARTLSDSFGEVVVVDRDPLTDGTGPRRGVPQGRHAHGLVAQGQQILEGLFPGLTEELIGAGVQVGDFSGDIRWY-FGGRRMRPTRSGLLSLAATRPVLEDRVRRRVFAIPGVVTRTGHSIDGLVTDRGGRRVVGARVTPEGGEPTTLEADLVVDATG 181          
BLAST of mRNA_P-wetherbeei_contig58695.1.1 vs. uniprot
Match: UPI00167D6727 (FAD-dependent monooxygenase n=1 Tax=Streptomyces inusitatus TaxID=68221 RepID=UPI00167D6727)

HSP 1 Score: 147 bits (371), Expect = 3.810e-39
Identity = 75/167 (44.91%), Postives = 104/167 (62.28%), Query Frame = 1
Query:    1 VMGGSMAGLLAARVLADYHDRVTIIERDSVGEWAEPRKGTPQDRHVHGFWARGLETVERLFPGVTAELHGGGAVPGDAVGDVNWHQFGGLKLRTPTGIGATLMTRPFLESHVRRRTLALPTISMRSGATVTDLTTSEEHRQVSGVYVLGAGGAREAIEADLVVDATG 501
            V+G  MAGLLAARVL+D +  VT+++RD++ +  +PR+G PQ R VHG  ARG + +E LFPG+T E+   GA  GD  GD+ W+  G    R+ +G+     +RPFLESHVR R  ALP +       +  L  +E+  ++ GV V    G  E IEADLV+DA+G
Sbjct:   11 VLGAGMAGLLAARVLSDAYTAVTVVDRDTLTDVTDPRRGVPQGRQVHGLLARGQQIIEELFPGLTEEMVSDGANLGDVAGDLRWYINGVRLRRSRSGLNTLTSSRPFLESHVRARVQALPNVEFLERRDIIRLNATEDRGRIDGVVVADRDGTEELIEADLVLDASG 177          
BLAST of mRNA_P-wetherbeei_contig58695.1.1 vs. uniprot
Match: A0A2U3LRF3_9BACT (Putative secreted protein n=1 Tax=Candidatus Sulfopaludibacter sp. SbA4 TaxID=2043165 RepID=A0A2U3LRF3_9BACT)

HSP 1 Score: 147 bits (370), Expect = 4.760e-39
Identity = 81/167 (48.50%), Postives = 102/167 (61.08%), Query Frame = 1
Query:    1 VMGGSMAGLLAARVLADYHDRVTIIERDSVGEWAEPRKGTPQDRHVHGFWARGLETVERLFPGVTAELHGGGAVPGDAVGDVNWHQFGGLKLRTPTGIGATLMTRPFLESHVRRRTLALPTISMRSGATVTDLTTSEEHRQVSGVYVLGAGGAREAIEADLVVDATG 501
            V+GGSM GLLAARVLAD + +VTI+ERD      E R+G PQ RH HG  A G + +ERLFPG++ +L   GA+ GD V +  W   GGL  R  +G+   LMTRP LE  VR R LAL  +  R G  V  LT SE+ ++V+GV   G       + ADLV+D TG
Sbjct:   12 VIGGSMGGLLAARVLADRYQQVTILERDEFPAIGEHRRGVPQGRHTHGLLASGRDVLERLFPGISNDLIAAGAIAGDIVQNARWCNEGGLLARFQSGLNGLLMTRPLLEGTVRHRVLALSNVVARQGFHVEALTVSEDRKRVTGVKDKGT-----ELHADLVIDTTG 173          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58695.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V1V139_9BACT1.830e-4148.21Uncharacterized protein n=1 Tax=Nitrospirae bacter... [more]
UPI001C688C291.190e-4048.50FAD-binding monooxygenase n=1 Tax=Sphaerisporangiu... [more]
A0A540VJX9_9CHLR1.390e-4047.93FAD-binding protein n=1 Tax=Litorilinea aerophila ... [more]
UPI0005EB2E3D3.400e-4049.70FAD-dependent monooxygenase n=1 Tax=Deinococcus pi... [more]
A0A7Y5BY50_9CHLR4.920e-4047.62FAD-dependent monooxygenase n=1 Tax=Anaerolineales... [more]
C1AR59_RHOOB1.260e-3947.93FAD_binding_3 domain-containing protein n=12 Tax=R... [more]
A0A533J7N6_9BRAD2.150e-3947.31Monooxygenase (Fragment) n=1 Tax=Bradyrhizobium ic... [more]
UPI0018E522162.950e-3947.62FAD-binding monooxygenase n=1 Tax=Nocardiopsis sp.... [more]
UPI00167D67273.810e-3944.91FAD-dependent monooxygenase n=1 Tax=Streptomyces i... [more]
A0A2U3LRF3_9BACT4.760e-3948.50Putative secreted protein n=1 Tax=Candidatus Sulfo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58695contigP-wetherbeei_contig58695:2..502 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog926554.KI912675_gene2317
Model size501
Max annot lvl1297|Deinococcus-Thermus
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.06e-40
EggNOG OGsCOG0654@1|root,COG0654@2|Bacteria,1WMEV@1297|Deinococcus-Thermus
DescriptionCOG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Cds size498
COG categoryCH
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186868.3488922-CDS-P-wetherbeei_contig58695:1..4991683186868.3488922-CDS-P-wetherbeei_contig58695:1..499Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58695 2..499 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186868.3587768-UTR-P-wetherbeei_contig58695:499..5021683186868.3587768-UTR-P-wetherbeei_contig58695:499..502Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig58695 500..502 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58695.1.1prot_P-wetherbeei_contig58695.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58695 2..499 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58695.1.1

>prot_P-wetherbeei_contig58695.1.1 ID=prot_P-wetherbeei_contig58695.1.1|Name=mRNA_P-wetherbeei_contig58695.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
MGGSMAGLLAARVLADYHDRVTIIERDSVGEWAEPRKGTPQDRHVHGFWA
RGLETVERLFPGVTAELHGGGAVPGDAVGDVNWHQFGGLKLRTPTGIGAT
LMTRPFLESHVRRRTLALPTISMRSGATVTDLTTSEEHRQVSGVYVLGAG
GAREAIEADLVVDATG
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mRNA from alignment at P-wetherbeei_contig58695:2..502-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58695.1.1 ID=mRNA_P-wetherbeei_contig58695.1.1|Name=mRNA_P-wetherbeei_contig58695.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig58695:2..502- (Phaeothamnion wetherbeei SAG_119_79)
GTGATGGGCGGCAGCATGGCCGGCCTGCTGGCCGCGCGCGTGCTTGCCGA CTACCACGATCGCGTCACCATCATCGAGCGCGACAGCGTCGGCGAGTGGG CCGAGCCACGCAAGGGCACGCCGCAGGATCGCCATGTACATGGTTTCTGG GCGCGCGGCCTGGAGACTGTCGAACGACTTTTCCCAGGGGTCACGGCCGA GCTGCATGGCGGTGGCGCGGTGCCCGGCGATGCGGTCGGTGATGTCAACT GGCACCAGTTCGGCGGGCTGAAGCTGCGCACGCCGACCGGGATCGGCGCC ACCTTGATGACGCGGCCGTTCCTTGAAAGCCATGTGCGGCGCCGGACGTT GGCGCTGCCCACGATCTCGATGCGCTCCGGCGCCACGGTCACCGACCTTA CGACCTCTGAAGAGCATCGGCAGGTGAGCGGCGTTTACGTGCTGGGTGCC GGCGGCGCGCGCGAGGCGATCGAGGCCGATCTCGTGGTCGACGCCACCGG C
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Coding sequence (CDS) from alignment at P-wetherbeei_contig58695:2..502-

>mRNA_P-wetherbeei_contig58695.1.1 ID=mRNA_P-wetherbeei_contig58695.1.1|Name=mRNA_P-wetherbeei_contig58695.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig58695:2..502- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCGGCAGCATGGCCGGCCTGCTGGCCGCGCGCGTGCTTGCCGACTA
CCACGATCGCGTCACCATCATCGAGCGCGACAGCGTCGGCGAGTGGGCCG
AGCCACGCAAGGGCACGCCGCAGGATCGCCATGTACATGGTTTCTGGGCG
CGCGGCCTGGAGACTGTCGAACGACTTTTCCCAGGGGTCACGGCCGAGCT
GCATGGCGGTGGCGCGGTGCCCGGCGATGCGGTCGGTGATGTCAACTGGC
ACCAGTTCGGCGGGCTGAAGCTGCGCACGCCGACCGGGATCGGCGCCACC
TTGATGACGCGGCCGTTCCTTGAAAGCCATGTGCGGCGCCGGACGTTGGC
GCTGCCCACGATCTCGATGCGCTCCGGCGCCACGGTCACCGACCTTACGA
CCTCTGAAGAGCATCGGCAGGTGAGCGGCGTTTACGTGCTGGGTGCCGGC
GGCGCGCGCGAGGCGATCGAGGCCGATCTCGTGGTCGACGCCACCGGC
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