mRNA_P-wetherbeei_contig58693.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58693.1.1
Unique NamemRNA_P-wetherbeei_contig58693.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig58693.1.1 vs. uniprot
Match: A0A7I9VSD2_9DELT (Succinate-semialdehyde dehydrogenase n=1 Tax=Anaeromyxobacter sp. Red267 TaxID=2590199 RepID=A0A7I9VSD2_9DELT)

HSP 1 Score: 258 bits (658), Expect = 9.930e-82
Identity = 127/167 (76.05%), Postives = 143/167 (85.63%), Query Frame = 1
Query:    1 KCALGCRHYAEHAEAYLADEHIKTDKAASYVRYLPIGPVLAVMPWNFPFWQVFRFAAPALAAGNVGLLKHASNVPECALAIEAIFAEAGFPDGAFQTLMIPSSMVNAVIADDRVRATTLTGSEGAGSKVAEASGKYLKRTVLELGGSDPFIVMPSADLDLAIKTAVT 501
            KCA  CR+YAEHAE +LADE ++T  + S+VR+LP+GPVLAVMPWNFPFWQVFRFAAPAL AGNVGLLKHASNVP CAL IEAIF  AGFP+GAFQTL++ S+ V  VIAD RVRA TLTGSEGAG KV EA+G+ +K+ VLELGGSDPFIVMPSADLD A KTAVT
Sbjct:   84 KCAWVCRYYAEHAERFLADEPVETSASRSFVRHLPLGPVLAVMPWNFPFWQVFRFAAPALMAGNVGLLKHASNVPGCALEIEAIFRRAGFPEGAFQTLLVGSAAVAGVIADPRVRAVTLTGSEGAGVKVGEAAGRAIKKVVLELGGSDPFIVMPSADLDAAAKTAVT 250          
BLAST of mRNA_P-wetherbeei_contig58693.1.1 vs. uniprot
Match: A0A846AE40_9CYAN (NAD-dependent succinate-semialdehyde dehydrogenase n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846AE40_9CYAN)

HSP 1 Score: 251 bits (641), Expect = 3.200e-79
Identity = 120/167 (71.86%), Postives = 142/167 (85.03%), Query Frame = 1
Query:    1 KCALGCRHYAEHAEAYLADEHIKTDKAASYVRYLPIGPVLAVMPWNFPFWQVFRFAAPALAAGNVGLLKHASNVPECALAIEAIFAEAGFPDGAFQTLMIPSSMVNAVIADDRVRATTLTGSEGAGSKVAEASGKYLKRTVLELGGSDPFIVMPSADLDLAIKTAVT 501
            KCA  CR+YAE+A A+LADE  KTD + SYVRYLP+G +LAVMPWNFPFWQVFRFAAPAL AGNVGLLKHASNVP+CALAIE +F +AGFP+G FQTL+I +  V AV+ D+RVRA TLTGSE AG+ +A A+G  +K+TVLELGGSDPFIV+PSAD+D A+ TAVT
Sbjct:   86 KCAWVCRYYAENAAAFLADEPAKTDASQSYVRYLPLGIILAVMPWNFPFWQVFRFAAPALMAGNVGLLKHASNVPQCALAIETVFKQAGFPEGVFQTLLIGADQVEAVVKDERVRAATLTGSEAAGASLAAAAGNQIKKTVLELGGSDPFIVLPSADIDAAVATAVT 252          
BLAST of mRNA_P-wetherbeei_contig58693.1.1 vs. uniprot
Match: A7HEQ4_ANADF (Aldehyde dehydrogenase n=4 Tax=Anaeromyxobacter TaxID=161492 RepID=A7HEQ4_ANADF)

HSP 1 Score: 251 bits (641), Expect = 3.750e-79
Identity = 121/167 (72.46%), Postives = 141/167 (84.43%), Query Frame = 1
Query:    1 KCALGCRHYAEHAEAYLADEHIKTDKAASYVRYLPIGPVLAVMPWNFPFWQVFRFAAPALAAGNVGLLKHASNVPECALAIEAIFAEAGFPDGAFQTLMIPSSMVNAVIADDRVRATTLTGSEGAGSKVAEASGKYLKRTVLELGGSDPFIVMPSADLDLAIKTAVT 501
            KCA  CR+YAE+AE +LADE +K     S+VRYLPIGPVLAVMPWNFPFWQVFRFAAPAL AGNVGLLKHASNVP+CALAIE +F EAGFP+GAFQTL++ SS V  V+ DDRV A TLTGSE AG+ VA  +G+ +K+TVLELGGSDPF+VMPSA+L+ A+ TAVT
Sbjct:   87 KCAWVCRYYAENAERFLADEEVKASATRSFVRYLPIGPVLAVMPWNFPFWQVFRFAAPALMAGNVGLLKHASNVPQCALAIEEVFREAGFPEGAFQTLLVGSSRVARVLEDDRVAAATLTGSEAAGAAVASTAGRVIKKTVLELGGSDPFVVMPSANLEQAVATAVT 253          
BLAST of mRNA_P-wetherbeei_contig58693.1.1 vs. uniprot
Match: A0A0D8ZV59_9CYAN (Succinate-semialdehyde dehydrogenase n=1 Tax=Aliterella atlantica CENA595 TaxID=1618023 RepID=A0A0D8ZV59_9CYAN)

HSP 1 Score: 250 bits (638), Expect = 7.290e-79
Identity = 120/167 (71.86%), Postives = 143/167 (85.63%), Query Frame = 1
Query:    1 KCALGCRHYAEHAEAYLADEHIKTDKAASYVRYLPIGPVLAVMPWNFPFWQVFRFAAPALAAGNVGLLKHASNVPECALAIEAIFAEAGFPDGAFQTLMIPSSMVNAVIADDRVRATTLTGSEGAGSKVAEASGKYLKRTVLELGGSDPFIVMPSADLDLAIKTAVT 501
            KCA  CRHYAE+A+AYLAD    TD ++S+VRY P+G +LAVMPWNFPFWQVFRFAAPAL AGNVG+LKHASNVP+CA+AIE IF +AGFP+GAFQTL+I +  V+ ++ADDR++A TLTGSE AG  +A A+GK LK+TVLELGGSDPFIVMPSADL+ AI TAVT
Sbjct:   86 KCAAVCRHYAENAQAYLADVPASTDASSSFVRYQPLGAILAVMPWNFPFWQVFRFAAPALMAGNVGVLKHASNVPQCAIAIEEIFHKAGFPEGAFQTLLIGAQQVDRLLADDRIKAATLTGSEAAGMSLAAAAGKQLKKTVLELGGSDPFIVMPSADLESAINTAVT 252          
BLAST of mRNA_P-wetherbeei_contig58693.1.1 vs. uniprot
Match: UPI001F57DDC3 (NAD-dependent succinate-semialdehyde dehydrogenase n=1 Tax=Anaeromyxobacter sp. SG63 TaxID=2925408 RepID=UPI001F57DDC3)

HSP 1 Score: 250 bits (638), Expect = 7.290e-79
Identity = 119/166 (71.69%), Postives = 139/166 (83.73%), Query Frame = 1
Query:    1 KCALGCRHYAEHAEAYLADEHIKTDKAASYVRYLPIGPVLAVMPWNFPFWQVFRFAAPALAAGNVGLLKHASNVPECALAIEAIFAEAGFPDGAFQTLMIPSSMVNAVIADDRVRATTLTGSEGAGSKVAEASGKYLKRTVLELGGSDPFIVMPSADLDLAIKTAV 498
            KCA  CR YAE+AE +LADE +++    S+VRYLP+GPVLAVMPWNFPFWQVFRFAAP L AGNVGLLKHASNVP+ ALAIE IF EAGFP+G FQTL++ SS V  ++ DDRV+A TLTGSE AG+ VA A G+ +K+TVLELGGSDPF+VMPSADLD A+KTAV
Sbjct:   87 KCAAACRFYAENAERFLADEELRSSATRSFVRYLPLGPVLAVMPWNFPFWQVFRFAAPGLMAGNVGLLKHASNVPQSALAIEEIFREAGFPEGCFQTLLVGSSRVQRIVEDDRVKAATLTGSEAAGAAVASACGRVIKKTVLELGGSDPFVVMPSADLDAAVKTAV 252          
BLAST of mRNA_P-wetherbeei_contig58693.1.1 vs. uniprot
Match: UPI00199C187A (NAD-dependent succinate-semialdehyde dehydrogenase n=1 Tax=Gloeobacterales cyanobacterium ES-bin-313 TaxID=2812629 RepID=UPI00199C187A)

HSP 1 Score: 249 bits (636), Expect = 1.670e-78
Identity = 120/166 (72.29%), Postives = 140/166 (84.34%), Query Frame = 1
Query:    1 KCALGCRHYAEHAEAYLADEHIKTDKAASYVRYLPIGPVLAVMPWNFPFWQVFRFAAPALAAGNVGLLKHASNVPECALAIEAIFAEAGFPDGAFQTLMIPSSMVNAVIADDRVRATTLTGSEGAGSKVAEASGKYLKRTVLELGGSDPFIVMPSADLDLAIKTAV 498
            KCA GC HYAEH E+YLAD+ + TD + S+VRY P+GP+LAVMPWNFPFWQVFRFAAPAL AGNV LLKHASNVP+CALAIEAIF EAGFPDGAFQTL+I  +    V+AD RV+A TLTGSE AG  VA  +G++LK+TVLELGGSDPFIV+PSAD+++A  TAV
Sbjct:   94 KCAAGCLHYAEHGESYLADQIVGTDASRSFVRYQPLGPILAVMPWNFPFWQVFRFAAPALMAGNVCLLKHASNVPQCALAIEAIFKEAGFPDGAFQTLLIVGTDTGKVVADPRVKAVTLTGSEPAGRSVAAIAGQHLKKTVLELGGSDPFIVLPSADIEVAAATAV 259          
BLAST of mRNA_P-wetherbeei_contig58693.1.1 vs. uniprot
Match: A0A6J4QLZ7_9ACTN (Succinate-semialdehyde dehydrogenase [NAD] Succinate-semialdehyde dehydrogenase [NADP+] n=2 Tax=Rubrobacteraceae TaxID=84997 RepID=A0A6J4QLZ7_9ACTN)

HSP 1 Score: 249 bits (636), Expect = 1.950e-78
Identity = 126/167 (75.45%), Postives = 140/167 (83.83%), Query Frame = 1
Query:    1 KCALGCRHYAEHAEAYLADEHIKTDKAASYVRYLPIGPVLAVMPWNFPFWQVFRFAAPALAAGNVGLLKHASNVPECALAIEAIFAEAGFPDGAFQTLMIPSSMVNAVIADDRVRATTLTGSEGAGSKVAEASGKYLKRTVLELGGSDPFIVMPSADLDLAIKTAVT 501
            KCA GCR+YAE+AEA LADE I+ + A ++VRY PIGPVLA+MPWNFPFWQVFRFAAPAL AGNVGLLKHASNVP+CALAIE I   AGF +GAFQTL+I SS V AVI D RVRA TLTGSE AG +VA  +G  +K+TVLELGGSDPFIVMPSADLD AI TAVT
Sbjct:   86 KCARGCRYYAENAEAMLADERIEMEGARTFVRYQPIGPVLAIMPWNFPFWQVFRFAAPALMAGNVGLLKHASNVPQCALAIEDIIHRAGFSEGAFQTLLISSSQVQAVIDDPRVRAATLTGSEPAGRQVASEAGGNIKKTVLELGGSDPFIVMPSADLDKAISTAVT 252          
BLAST of mRNA_P-wetherbeei_contig58693.1.1 vs. uniprot
Match: A0A351KZL1_9CYAN (NADP-dependent succinic semialdehyde dehydrogenase n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A351KZL1_9CYAN)

HSP 1 Score: 249 bits (635), Expect = 2.060e-78
Identity = 119/167 (71.26%), Postives = 140/167 (83.83%), Query Frame = 1
Query:    1 KCALGCRHYAEHAEAYLADEHIKTDKAASYVRYLPIGPVLAVMPWNFPFWQVFRFAAPALAAGNVGLLKHASNVPECALAIEAIFAEAGFPDGAFQTLMIPSSMVNAVIADDRVRATTLTGSEGAGSKVAEASGKYLKRTVLELGGSDPFIVMPSADLDLAIKTAVT 501
            KCAL CR+YAEHA  +LAD    TD + S+VRY P+GP+LAVMPWNFPFWQVFRFAAPAL AGNVGLLKHASNVP+CA+ IE IF +AGFP+GAFQTL++ +  V A++ADDRV A TLTGSEGAG  +A  +GK+LK+TVLELGGSDPFIV+ SADLD A+ TAVT
Sbjct:   86 KCALVCRYYAEHAAEFLADVPASTDASQSFVRYQPLGPILAVMPWNFPFWQVFRFAAPALMAGNVGLLKHASNVPQCAVKIEEIFRQAGFPEGAFQTLLVGADKVAAIVADDRVMAATLTGSEGAGISLASIAGKHLKKTVLELGGSDPFIVLESADLDAAVSTAVT 252          
BLAST of mRNA_P-wetherbeei_contig58693.1.1 vs. uniprot
Match: A0A2P8VXV0_9CYAN (NADP-dependent succinic semialdehyde dehydrogenase (Fragment) n=1 Tax=filamentous cyanobacterium CCP5 TaxID=2107701 RepID=A0A2P8VXV0_9CYAN)

HSP 1 Score: 243 bits (621), Expect = 2.700e-78
Identity = 115/167 (68.86%), Postives = 136/167 (81.44%), Query Frame = 1
Query:    1 KCALGCRHYAEHAEAYLADEHIKTDKAASYVRYLPIGPVLAVMPWNFPFWQVFRFAAPALAAGNVGLLKHASNVPECALAIEAIFAEAGFPDGAFQTLMIPSSMVNAVIADDRVRATTLTGSEGAGSKVAEASGKYLKRTVLELGGSDPFIVMPSADLDLAIKTAVT 501
            K A  CR YAEHA  +LAD+H+ TD + SYVRYLPIGPVLAVMPWNFPFWQVFRFAAPAL AGNVGLLKHASNVP+CAL IE +F +AGFPDGAFQTL+I    +  ++ DDR++A TLTGSE AG+ +A   G+ +K+TVLELGGSDPF+VM SAD+D A+ TA T
Sbjct:   86 KSAWVCRFYAEHAAEFLADKHVSTDASQSYVRYLPIGPVLAVMPWNFPFWQVFRFAAPALMAGNVGLLKHASNVPQCALTIETVFQKAGFPDGAFQTLLIGGDRIADLVKDDRIKAATLTGSEAAGASLASVCGREIKKTVLELGGSDPFVVMASADVDQAVATAAT 252          
BLAST of mRNA_P-wetherbeei_contig58693.1.1 vs. uniprot
Match: A0A3C0NE91_9CYAN (NADP-dependent succinic semialdehyde dehydrogenase (Fragment) n=1 Tax=Cyanobacteria bacterium UBA8543 TaxID=2055766 RepID=A0A3C0NE91_9CYAN)

HSP 1 Score: 242 bits (618), Expect = 2.790e-78
Identity = 121/167 (72.46%), Postives = 138/167 (82.63%), Query Frame = 1
Query:    1 KCALGCRHYAEHAEAYLADEHIKTDKAASYVRYLPIGPVLAVMPWNFPFWQVFRFAAPALAAGNVGLLKHASNVPECALAIEAIFAEAGFPDGAFQTLMIPSSMVNAVIADDRVRATTLTGSEGAGSKVAEASGKYLKRTVLELGGSDPFIVMPSADLDLAIKTAVT 501
            KCAL CR+YAEHA  +LAD    TD + S+VRY P+G +LAVMPWNFPFWQVFRFAAPAL AGNVGLLKHASNVP+ ALAIE IF  AGFP+GAFQTL+I +S V AVI D RV+A TLTGSE AG+ +A A+GK LK+TVLELGGSDPFIV+ SADLD A+ TAVT
Sbjct:   86 KCALVCRYYAEHAADFLADSPASTDASQSFVRYQPLGIILAVMPWNFPFWQVFRFAAPALMAGNVGLLKHASNVPQSALAIEEIFKRAGFPEGAFQTLLIGASQVEAVINDQRVKAATLTGSEPAGASLATAAGKQLKKTVLELGGSDPFIVLESADLDAAVATAVT 252          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58693.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7I9VSD2_9DELT9.930e-8276.05Succinate-semialdehyde dehydrogenase n=1 Tax=Anaer... [more]
A0A846AE40_9CYAN3.200e-7971.86NAD-dependent succinate-semialdehyde dehydrogenase... [more]
A7HEQ4_ANADF3.750e-7972.46Aldehyde dehydrogenase n=4 Tax=Anaeromyxobacter Ta... [more]
A0A0D8ZV59_9CYAN7.290e-7971.86Succinate-semialdehyde dehydrogenase n=1 Tax=Alite... [more]
UPI001F57DDC37.290e-7971.69NAD-dependent succinate-semialdehyde dehydrogenase... [more]
UPI00199C187A1.670e-7872.29NAD-dependent succinate-semialdehyde dehydrogenase... [more]
A0A6J4QLZ7_9ACTN1.950e-7875.45Succinate-semialdehyde dehydrogenase [NAD] Succina... [more]
A0A351KZL1_9CYAN2.060e-7871.26NADP-dependent succinic semialdehyde dehydrogenase... [more]
A0A2P8VXV0_9CYAN2.700e-7868.86NADP-dependent succinic semialdehyde dehydrogenase... [more]
A0A3C0NE91_9CYAN2.790e-7872.46NADP-dependent succinic semialdehyde dehydrogenase... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58693contigP-wetherbeei_contig58693:3..503 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog404589.Anae109_3003
Preferred namegabD
PFAMsAldedh
Model size501
Max annot lvl28221|Deltaproteobacteria
KEGG rclassRC00080
KEGG koko:K00135
KEGG ReactionR00713,R00714,R02401
KEGG Pathwayko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120
KEGG ModuleM00027
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.15e-80
EggNOG OGsCOG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,42MDU@68525|delta/epsilon subdivisions,2WM9V@28221|Deltaproteobacteria,2YUA7@29|Myxococcales
EC1.2.1.16,1.2.1.20,1.2.1.79
DescriptionAldehyde dehydrogenase family
Cds size501
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186868.313616-CDS-P-wetherbeei_contig58693:2..5031683186868.313616-CDS-P-wetherbeei_contig58693:2..503Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58693 3..503 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58693.1.1prot_P-wetherbeei_contig58693.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58693 3..503 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58693.1.1

>prot_P-wetherbeei_contig58693.1.1 ID=prot_P-wetherbeei_contig58693.1.1|Name=mRNA_P-wetherbeei_contig58693.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp
KCALGCRHYAEHAEAYLADEHIKTDKAASYVRYLPIGPVLAVMPWNFPFW
QVFRFAAPALAAGNVGLLKHASNVPECALAIEAIFAEAGFPDGAFQTLMI
PSSMVNAVIADDRVRATTLTGSEGAGSKVAEASGKYLKRTVLELGGSDPF
IVMPSADLDLAIKTAVT
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mRNA from alignment at P-wetherbeei_contig58693:3..503-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58693.1.1 ID=mRNA_P-wetherbeei_contig58693.1.1|Name=mRNA_P-wetherbeei_contig58693.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig58693:3..503- (Phaeothamnion wetherbeei SAG_119_79)
AAATGCGCTCTCGGCTGCCGCCACTACGCCGAGCACGCCGAAGCCTATCT GGCCGACGAGCACATCAAGACGGACAAGGCCGCGAGCTACGTTCGCTACC TGCCCATCGGCCCAGTGCTCGCGGTAATGCCCTGGAATTTCCCGTTCTGG CAGGTCTTCCGGTTCGCCGCCCCCGCGCTCGCCGCCGGAAACGTCGGCTT GCTCAAGCACGCCTCCAACGTTCCCGAATGCGCCCTGGCGATCGAGGCGA TCTTCGCCGAGGCCGGTTTCCCGGATGGCGCGTTCCAGACGCTGATGATC CCCTCGTCCATGGTCAACGCCGTCATCGCGGATGACCGCGTGCGCGCCAC CACCCTCACCGGCAGCGAGGGCGCCGGCTCCAAAGTCGCCGAAGCCTCCG GCAAGTATCTCAAGAGAACCGTGCTCGAACTCGGCGGCTCTGACCCCTTC ATCGTCATGCCGTCCGCCGACCTCGACCTCGCTATCAAAACGGCTGTCAC C
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Coding sequence (CDS) from alignment at P-wetherbeei_contig58693:3..503-

>mRNA_P-wetherbeei_contig58693.1.1 ID=mRNA_P-wetherbeei_contig58693.1.1|Name=mRNA_P-wetherbeei_contig58693.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig58693:3..503- (Phaeothamnion wetherbeei SAG_119_79)
AAATGCGCTCTCGGCTGCCGCCACTACGCCGAGCACGCCGAAGCCTATCT
GGCCGACGAGCACATCAAGACGGACAAGGCCGCGAGCTACGTTCGCTACC
TGCCCATCGGCCCAGTGCTCGCGGTAATGCCCTGGAATTTCCCGTTCTGG
CAGGTCTTCCGGTTCGCCGCCCCCGCGCTCGCCGCCGGAAACGTCGGCTT
GCTCAAGCACGCCTCCAACGTTCCCGAATGCGCCCTGGCGATCGAGGCGA
TCTTCGCCGAGGCCGGTTTCCCGGATGGCGCGTTCCAGACGCTGATGATC
CCCTCGTCCATGGTCAACGCCGTCATCGCGGATGACCGCGTGCGCGCCAC
CACCCTCACCGGCAGCGAGGGCGCCGGCTCCAAAGTCGCCGAAGCCTCCG
GCAAGTATCTCAAGAGAACCGTGCTCGAACTCGGCGGCTCTGACCCCTTC
ATCGTCATGCCGTCCGCCGACCTCGACCTCGCTATCAAAACGGCTGTCAC
C
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