mRNA_P-wetherbeei_contig5867.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5867.1.1 vs. uniprot
Match: A0A7X9KLY3_9ACTN (Multicopper oxidase domain-containing protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KLY3_9ACTN) HSP 1 Score: 263 bits (673), Expect = 2.060e-88 Identity = 134/156 (85.90%), Postives = 144/156 (92.31%), Query Frame = 1
Query: 1 MTHTVRRLPLIAGIVALAALVAACGQTRESSSTGTPDAGASPAGARTVEIAMEDIKFDQTTLTVKTGETIDFRFTNTGQIPHDAFIGDAAAQMEHDDEMAHMGDTSVHSMGEAAVTVQPGAAGELSYTFAEPGTYEVGCHQPGHYGAGMKIAVTVE 468
MTHT+R LPLIAGIVA+ LVAACG+TR+SSS + D+ A+PAGAR V++AMEDIKFDQTTLTVKTGETIDFRFTNTGQIPHDAFIGDAAAQMEHDDEMAHMGD S HSMGEAAVTVQPGAAG+LSYTF EPGTYEVGCHQPGHYGAGMKI VTVE
Sbjct: 1 MTHTLR-LPLIAGIVAITTLVAACGETRQSSSDASRDSAAAPAGARAVDVAMEDIKFDQTTLTVKTGETIDFRFTNTGQIPHDAFIGDAAAQMEHDDEMAHMGDASTHSMGEAAVTVQPGAAGQLSYTFTEPGTYEVGCHQPGHYGAGMKIEVTVE 155
BLAST of mRNA_P-wetherbeei_contig5867.1.1 vs. uniprot
Match: A0A7V9V7K7_9ACTN (Cupredoxin domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9V7K7_9ACTN) HSP 1 Score: 120 bits (301), Expect = 5.110e-32 Identity = 70/150 (46.67%), Postives = 87/150 (58.00%), Query Frame = 1
Query: 16 RRLPLIAGIVALAALVAACGQTRESSSTGTPDAGASPAGARTVEIAMEDIKFDQTTLTVKTGETIDFRFTNTGQIPHDAFIGDAAAQMEHDDEMAHMGDTSVHSMGEAAVTVQPGAAGELSYTFAEPGTYEVGCHQPGHYGAGMKIAVTV 465
RR+ + + L L AACG + E SST PD AR +E+ M D+ F T + V+ GE + F F NTGQ+ HDAFIGD AAQ EH+ EM G H G AV+V+PG EL+ TF P +GCHQPGHY GMK+ V V
Sbjct: 2 RRVMFLLAVPVLVVL-AACGSSDEPSSTAGPD------DARVIELEMRDVAFAPTQVDVRAGEKVRFVFRNTGQVTHDAFIGDQAAQDEHEKEMR--GGHGDHGKGSDAVSVKPGNTAELTQTFDRPAQILIGCHQPGHYTGGMKVTVNV 142
BLAST of mRNA_P-wetherbeei_contig5867.1.1 vs. uniprot
Match: A0A6J4IYQ1_9ACTN (Cupredoxin_1 domain-containing protein n=1 Tax=uncultured Acidimicrobiales bacterium TaxID=310071 RepID=A0A6J4IYQ1_9ACTN) HSP 1 Score: 117 bits (294), Expect = 5.850e-31 Identity = 70/150 (46.67%), Postives = 88/150 (58.67%), Query Frame = 1
Query: 16 RRLPLIAGIVALAALVAACGQTRESSSTGTPDAGASPAGARTVEIAMEDIKFDQTTLTVKTGETIDFRFTNTGQIPHDAFIGDAAAQMEHDDEMAHMGDTSVHSMGEAAVTVQPGAAGELSYTFAEPGTYEVGCHQPGHYGAGMKIAVTV 465
RR+ + I LA L AACG + + ++T A AR VE+ M DI F T + V+ GE + F F NTGQ+ HDAFIGD AAQ EH+ EM G H G AV+V+PG +L+YTF PG +GCHQPGHY GMK V +
Sbjct: 2 RRVMFLLAIPVLAVL-AACGSSDDGNTT------AGSGDARVVEVEMRDIAFAPTAVDVRAGEKVRFVFKNTGQVVHDAFIGDQAAQDEHEKEMR--GGHGDHGKGGNAVSVKPGKTEQLTYTFDRPGQILIGCHQPGHYTGGMKATVNI 142
BLAST of mRNA_P-wetherbeei_contig5867.1.1 vs. uniprot
Match: UPI0013002B10 (cupredoxin domain-containing protein n=1 Tax=Euzebya rosea TaxID=2052804 RepID=UPI0013002B10) HSP 1 Score: 113 bits (283), Expect = 4.460e-29 Identity = 71/161 (44.10%), Postives = 88/161 (54.66%), Query Frame = 1
Query: 1 MTHTVRRLPLIAGIVALAALVAACGQTRESSSTGTPDAGASPAGARTVEIAMEDIKFDQTTLTVKTGETIDFRFTNTGQIPHDAFIGDAAAQMEHDDEMAHMGDTSVHSMGEA--------AVTVQPGAAGELSYTFAEPGTYEVGCHQPGHYGAGMKIAV 459
MT T RR PL +VA+ A+ A ++ S D+GA+ A RTVE+ M D+ F ++TV GET+ RFTN G++PHDAF+GDAAAQ H EMA AVTV PG GEL T G +GCHQPGHY AGM + V
Sbjct: 1 MTTTRRRWPLTLALVAITAMACAA---PDAGSDPASDSGATAAPGRTVEVTMTDLAFSPASITVADGETVRVRFTNDGELPHDAFVGDAAAQDAHGAEMAXXXXXXXXXXXXXXXXXXXXXAVTVDPGETGELLVTGTASGELLIGCHQPGHYEAGMVMQV 158
BLAST of mRNA_P-wetherbeei_contig5867.1.1 vs. uniprot
Match: A0A7V9B4F3_9ACTN (Cupredoxin domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9B4F3_9ACTN) HSP 1 Score: 112 bits (280), Expect = 8.780e-29 Identity = 61/121 (50.41%), Postives = 79/121 (65.29%), Query Frame = 1
Query: 109 DAGASPAGARTVEIAMEDIKFDQTTLTVKTGETIDFRFTNTGQIPHDAFIGDAAAQMEHDDEMAHM-GDTSVHSMGEA-AVTVQPGAAGELSYTFAEPGTYEVGCHQPGHYGAGMKIAVTV 465
DA A RTVEI M D F+ ++ V GET+ F FTNTG++ HDAF+GD AAQ H+ +M GD G++ AVTV+PG EL++TF E G+ E+GCHQPGHY GMK+A+ V
Sbjct: 27 DATAGNGDVRTVEIDMADNVFEPDSVDVNRGETVRFVFTNTGEVAHDAFVGDTAAQDGHEMDMREAEGDEHGSGHGDSGAVTVEPGDTAELTHTFDESGSLEIGCHQPGHYDGGMKLAIDV 147
BLAST of mRNA_P-wetherbeei_contig5867.1.1 vs. uniprot
Match: A0A7W0P0L7_9ACTN (Cupredoxin domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0P0L7_9ACTN) HSP 1 Score: 112 bits (281), Expect = 1.080e-28 Identity = 77/164 (46.95%), Postives = 96/164 (58.54%), Query Frame = 1
Query: 19 RLPLIAGIVALAALV-AACGQTRESSSTGTPD-----------AGASPAGA-RTVEI-AMEDIKFDQTTLTVKTGETIDFRFTNTGQIPHDAFIGDAAAQMEHDDEMAHMGDTSVHSMGEAAVTVQPGAAGELSYTFAEPGTYEVGCHQPGHYGAGMKIAVTVE 468
RL A ++A+AALV AC T ++T T D A A PA A RTVEI A +D +FD TLTV GETI F+ N GQ PHD +GD AQ EH+ E+A MG T +H A V+V G EL++ F + GT +GCHQPGHY AGM +TV+
Sbjct: 5 RLRPSAFVLAVAALVLGACTGTSAPTATSTTDGTDPGIEFTFGAPADPAEADRTVEIVASDDFRFDPATLTVVAGETITFQIVNAGQDPHDFTLGDQVAQDEHEAEVADMGGTMMHDTANA-VSVDAGETKELTWRFTQAGTVLIGCHQPGHYAAGMTGQITVQ 167
BLAST of mRNA_P-wetherbeei_contig5867.1.1 vs. uniprot
Match: A0A349B618_9ACTN (Cupredoxin_1 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B618_9ACTN) HSP 1 Score: 105 bits (263), Expect = 4.000e-26 Identity = 68/159 (42.77%), Postives = 86/159 (54.09%), Query Frame = 1
Query: 16 RRLPLIAGIVALAALV-AACGQTRESSSTGTPDAGASPAGARTVEIAMEDIKFDQTTLTVKTGETIDFRFTNTGQIPHDAFIGDAAAQMEHDDEMAHMG-------DTSVHSMGE-AAVTVQPGAAGELSYTFAEPGTYEVGCHQPGHYGAGMKIAVTV 465
R L G+VA AALV AACG + ++ GT D RT+E+ MEDI F + V+ GET+ F F N G I HDAFIGD AQ EH+ EM DT H E +TV PG GE+++TF +GCH+ GHY AGM + + V
Sbjct: 3 RTTTLFIGVVATAALVLAACGDDDDGATIGTED------DPRTIEVDMEDIAFSPDQVEVQDGETVRFVFHNKGAIAHDAFIGDEEAQEEHEMEMRXXXXXXXXGDDTGGHDEDEEGGITVMPGETGEITHTFHADDNVMIGCHEEGHYDAGMIMTIDV 155
BLAST of mRNA_P-wetherbeei_contig5867.1.1 vs. uniprot
Match: A0A7W0NYG0_9ACTN (Multicopper oxidase domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0NYG0_9ACTN) HSP 1 Score: 105 bits (263), Expect = 4.000e-26 Identity = 66/147 (44.90%), Postives = 84/147 (57.14%), Query Frame = 1
Query: 58 LVAACGQTRESSSTGTPDAG------ASPAGA----RTVEIAMED-IKFDQTTLTVKTGETIDFRFTNTGQIPHDAFIGDAAAQMEHDDEMAHMGDTSVHSMGEAAVTVQPGAAGELSYTFAEPGTYEVGCHQPGHYGAGMKIAVTV 465
L+ ACG + S++ DA PA + R VEI D + FD + LT TGET+ FR N G I HD +GD Q EH++EMA MG + + AVTV GA EL++TF +PGT +GCHQPGHY AGMK +TV
Sbjct: 10 LITACGGSASSTTAAGSDANQGEFAFGEPADSSNTDRIVEIVATDGLVFDPSDLTATTGETVTFRIVNEGTIIHDFTLGDEVTQDEHEEEMAEMGGMAHEASN--AVTVAAGATKELTWTFTQPGTVLIGCHQPGHYDAGMKGQITV 154
BLAST of mRNA_P-wetherbeei_contig5867.1.1 vs. uniprot
Match: A0A346Y302_9ACTN (Copper tolerance protein n=2 Tax=Euzebya pacifica TaxID=1608957 RepID=A0A346Y302_9ACTN) HSP 1 Score: 105 bits (262), Expect = 5.350e-26 Identity = 68/159 (42.77%), Postives = 84/159 (52.83%), Query Frame = 1
Query: 1 MTHTVRRLPLIAGIVALAALVAACGQTRESSSTGTPDAG----ASPAGARTVEIAMEDIKFDQTTLTVKTGETIDFRFTNTGQIPHDAFIGDAAAQMEHDDEMAHMGDTSVHSMGEA--AVTVQPGAAGELSYTFAEPGTYEVGCHQPGHYGAGMKIAV 459
M T R PL+ ++A+ A+ A PDAG AS A RT+E+ M D+ F T++TV GET+ RFTN G +PHDAF+GDA AQ H A AVTV+PG GEL T G +GCHQPGHYGAGM + V
Sbjct: 4 MITTRRPWPLVLALMAVTAMACAA-----------PDAGSDDTASAAPERTIEVTMTDLAFTPTSITVADGETVRVRFTNDGALPHDAFVGDAEAQDAHXXXXXXXXXXXXXXXAGADDAVTVEPGETGELLVTGTASGDLLIGCHQPGHYGAGMVMQV 151
BLAST of mRNA_P-wetherbeei_contig5867.1.1 vs. uniprot
Match: A0A7V9C6E1_9ACTN (Cupredoxin domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9C6E1_9ACTN) HSP 1 Score: 100 bits (250), Expect = 3.910e-24 Identity = 60/118 (50.85%), Postives = 73/118 (61.86%), Query Frame = 1
Query: 118 ASPAGA-RTVEI-AMEDIKFDQTTLTVKTGETIDFRFTNTGQIPHDAFIGDAAAQMEHDDEMAHMGDTSVHSMGEAAVTVQPGAAGELSYTFAEPGTYEVGCHQPGHYGAGMKIAVTV 465
A PA A R+VEI A +D +F LTV GET+ FR N GQ+ HD +GD AAQ EH+ +MA D + S AVTVQ G EL++ F E GT +GCHQPGHY AGM +TV
Sbjct: 42 ADPAEADRSVEIVANDDFRFTPPALTVVAGETVTFRIVNAGQVAHDFTLGDQAAQDEHEAQMAE--DGMIMSDAPNAVTVQAGETEELTWRFTEAGTVLIGCHQPGHYAAGMTGEITV 157 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5867.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5867.1.1 >prot_P-wetherbeei_contig5867.1.1 ID=prot_P-wetherbeei_contig5867.1.1|Name=mRNA_P-wetherbeei_contig5867.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=157bp MTHTVRRLPLIAGIVALAALVAACGQTRESSSTGTPDAGASPAGARTVEIback to top mRNA from alignment at P-wetherbeei_contig5867:84..554- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5867.1.1 ID=mRNA_P-wetherbeei_contig5867.1.1|Name=mRNA_P-wetherbeei_contig5867.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig5867:84..554- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5867:84..554- >mRNA_P-wetherbeei_contig5867.1.1 ID=mRNA_P-wetherbeei_contig5867.1.1|Name=mRNA_P-wetherbeei_contig5867.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig5867:84..554- (Phaeothamnion wetherbeei SAG_119_79)back to top |