mRNA_P-wetherbeei_contig5861.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5861.1.1
Unique NamemRNA_P-wetherbeei_contig5861.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5861.1.1 vs. uniprot
Match: A0A835YMI8_9STRA (FtsH protease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMI8_9STRA)

HSP 1 Score: 446 bits (1148), Expect = 2.240e-148
Identity = 223/296 (75.34%), Postives = 259/296 (87.50%), Query Frame = 3
Query:  216 QVHARGKPLASDVDLEGISRRTPGFSGAQLQNLLNEAAIFAARKEKTIIEWEDVDSAVDRLLVGLEKKNAKTSPRMKEIVAYHEAGHAVIGALMPDYDMVQKVTIIPRSNGAGGLTFFAPSEARVESRLYSRQYLEAQLAVALGGRLAEEIMFGEDEVTTGASNDLQQVASIARRMVSQWGMSEKVGPLVVGGGGGGNPFMGRSMGEQADSWGSDIMKEVDDEVERVVNNAYLVGKKILQDNKALLESLALKLIEQETVSAEELSLMITEHNVVMGPYGVYGTDQNREKLPFQRQP 1103
            +VHARGKPL+ DVDL  ++RRTPGFSGAQLQNLLNEAAIFAARKEKTII+W+D+D A+DRLLVGLEKKNA+TS RMKEIVAYHEAGHA++GALMPDYDMVQKVTIIPRSNGAGGLTFFAPSEAR+ES LYSRQYLEAQLAVALGGRLAEEI++G+D VTTGASNDLQQVA+IARRMV+QWGMSE VG +VVGG   GNPFMGR MGE  DSWG  ++++VD EV R+V+NAYL  K IL+ N+ LLE+L  +L+EQE V+AEEL+++I++ NV M PYGVYG   +   LPFQ QP
Sbjct:  440 KVHARGKPLSPDVDLSSVARRTPGFSGAQLQNLLNEAAIFAARKEKTIIDWDDIDGAIDRLLVGLEKKNAQTSERMKEIVAYHEAGHAIVGALMPDYDMVQKVTIIPRSNGAGGLTFFAPSEARLESGLYSRQYLEAQLAVALGGRLAEEIIYGDDGVTTGASNDLQQVANIARRMVTQWGMSEVVGQIVVGGXXXGNPFMGRQMGEGGDSWGPKVIEQVDQEVGRLVSNAYLTAKNILKQNRNLLEALKEQLLEQEQVTAEELAVLISKFNVAMAPYGVYGEAADEALLPFQSQP 735          
BLAST of mRNA_P-wetherbeei_contig5861.1.1 vs. uniprot
Match: A0A835YNY9_9STRA (Metalloprotease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNY9_9STRA)

HSP 1 Score: 431 bits (1107), Expect = 9.510e-144
Identity = 220/300 (73.33%), Postives = 259/300 (86.33%), Query Frame = 3
Query:  216 QVHARGKPLASDVDLEGISRRTPGFSGAQLQNLLNEAAIFAARKEKTIIEWEDVDSAVDRLLVGLEKKNA-KTSPRMKEIVAYHEAGHAVIGALMPDYDMVQKVTIIPRSNGAGGLTFFAPSEARVESRLYSRQYLEAQLAVALGGRLAEEIMFGEDEVTTGASNDLQQVASIARRMVSQWGMSEKVGPLVVGGGGGGNPFMGRSMGEQADSWGSDIMKEVDDEVERVVNNAYLVGKKILQDNKALLESLALKLIEQETVSAEELSLMITEHN--VVMGPYGVYGTDQN-REKLPFQRQP 1103
            +VHARGKPL+SDVDLE I+RRTPG+SGAQLQNL+NEAAIFAARK+KTIIEWED+DSA+DRL+VGLEKK     + RMKEIVAYHE+GHA+ GALMPDYDMVQKVTIIPRSNGAGGLTFFAPSE+R+ES LYSRQYLEAQLAVALGGR+AEE+++GE+ VTTGASNDLQQVASIARRMV QWGMS+KVG +VVGGGGGGNPFMGR MGE  D+WG  + ++VD EVER+VNNAY+  K+IL  N  LLE LA +L+E E+V+AEEL +MI E    + M PYG+Y  ++N R+ LPF+ QP
Sbjct:  312 KVHARGKPLSSDVDLESIARRTPGYSGAQLQNLMNEAAIFAARKDKTIIEWEDIDSALDRLMVGLEKKGGWGEAKRMKEIVAYHESGHAIAGALMPDYDMVQKVTIIPRSNGAGGLTFFAPSESRLESGLYSRQYLEAQLAVALGGRVAEELIYGENGVTTGASNDLQQVASIARRMVGQWGMSDKVGQIVVGGGGGGNPFMGRQMGEAQDTWGPKVTEQVDQEVERIVNNAYVRCKEILSHNVDLLEKLAARLLEVESVTAEELGIMIMEQGDKLWMAPYGMYDLEENHRDALPFKEQP 611          
BLAST of mRNA_P-wetherbeei_contig5861.1.1 vs. uniprot
Match: A0A7S2WUP6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUP6_9STRA)

HSP 1 Score: 393 bits (1009), Expect = 4.710e-133
Identity = 198/300 (66.00%), Postives = 238/300 (79.33%), Query Frame = 3
Query:  219 VHARGKPLASDVDLEGISRRTPGFSGAQLQNLLNEAAIFAARKEKTIIEWEDVDSAVDRLLVGLEKKN--AKTSPRMKEIVAYHEAGHAVIGALMPDYDMVQKVTIIPRSNGAGGLTFFAPSEARVESRLYSRQYLEAQLAVALGGRLAEEIMFGEDEVTTGASNDLQQVASIARRMVSQWGMSEKVGPLVVGGGGGGNPFMGRSMGEQADSWGSDIMKEVDDEVERVVNNAYLVGKKILQDNKALLESLALKLIEQETVSAEELSLMITEHNVVMGPYGVYGTDQNREKLPFQRQPASV 1112
            VH+RGKPL  DVDLE I RRTPGFSGAQL+NL+NEAAI AARK K+ I WE++D AVDR++VGLEKK   A  S R  E+VAYHEAGHA+ GAL+PDYD VQK++IIPRSNGAGGLTFF+P EAR+ES +YS+QYLE+QLAVALGGRLAEE+++GED VTTGASND+QQVA+IA+RMV +WGMS+ VG + +     G PFMGRSMG +   WGS IM  VD EVER+VNN+YL  KKIL +N  LL  LA  L+EQE VSAEE  +M+ E N  + P+ V G ++NR+KLPFQ  PASV
Sbjct:   30 VHSRGKPLEPDVDLEAIGRRTPGFSGAQLENLMNEAAITAARKGKSTIGWEEIDGAVDRIMVGLEKKGGTAMLSARQNELVAYHEAGHAICGALIPDYDQVQKISIIPRSNGAGGLTFFSPQEARLESGMYSKQYLESQLAVALGGRLAEELIYGEDFVTTGASNDIQQVANIAKRMVKEWGMSDVVGCIALSSPQSGGPFMGRSMGMRQTQWGSKIMSNVDAEVERLVNNSYLTAKKILSENMDLLHHLAKTLVEQEVVSAEEFQMMLVEFNAKVVPFDVIGNEKNRDKLPFQEMPASV 329          
BLAST of mRNA_P-wetherbeei_contig5861.1.1 vs. uniprot
Match: A0A7S1BVA0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVA0_9STRA)

HSP 1 Score: 385 bits (989), Expect = 2.730e-130
Identity = 195/299 (65.22%), Postives = 238/299 (79.60%), Query Frame = 3
Query:  216 QVHARGKPLASDVDLEGISRRTPGFSGAQLQNLLNEAAIFAARKEKTIIEWEDVDSAVDRLLVGLEKKNAKTSPRMK--EIVAYHEAGHAVIGALMPDYDMVQKVTIIPRSNGAGGLTFFAPSEARVESRLYSRQYLEAQLAVALGGRLAEEIMFGEDEVTTGASNDLQQVASIARRMVSQWGMSEKVGPLVVGGGGGGNPFMGRSMGEQADSWGSDIMKEVDDEVERVVNNAYLVGKKILQDNKALLESLALKLIEQETVSAEELSLMITEHNVVMGPYGVYGTDQNREKLPFQRQPA 1106
            +VHARGKP+  DVDLE ++RRTPGFSGA LQNLLNEAAIFAARK+KT I WE++DSAVDR++VGLEKK   +   +K  E+VA+HEAGHAV+GA MPDYD VQK+TIIPRSNGAGGLTFFAPS+ R+   LYS+QYLE+QLAVALGGRLAEEI+FGEDEVTTGASND++QVA IA+RMV+QWGMSEKVGP+V+     G PFMGRSMG+   +WG +I    D E+ER+VNN+YL+ KK+L DNK L   L+  L+E+E VSAEE  +M  E  +    +   G + NR+KLPFQ QP+
Sbjct:   12 KVHARGKPIEPDVDLEAVARRTPGFSGASLQNLLNEAAIFAARKQKTTIGWEEIDSAVDRIMVGLEKKGGTSEQTLKRKELVAFHEAGHAVVGAAMPDYDQVQKITIIPRSNGAGGLTFFAPSDIRLTG-LYSKQYLESQLAVALGGRLAEEIIFGEDEVTTGASNDIEQVADIAKRMVTQWGMSEKVGPVVIEEQQSGGPFMGRSMGQAQTTWGGNISSAADAEIERLVNNSYLMAKKVLLDNKDLFMHLSQTLVEREQVSAEEFQMMQVEFGMQTVDFITIGDELNRDKLPFQTQPS 309          
BLAST of mRNA_P-wetherbeei_contig5861.1.1 vs. uniprot
Match: A0A7S2E7S1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E7S1_9STRA)

HSP 1 Score: 387 bits (993), Expect = 5.310e-130
Identity = 195/300 (65.00%), Postives = 238/300 (79.33%), Query Frame = 3
Query:  219 VHARGKPLASDVDLEGISRRTPGFSGAQLQNLLNEAAIFAARKEKTIIEWEDVDSAVDRLLVGLEKKNAKTSPRMK--EIVAYHEAGHAVIGALMPDYDMVQKVTIIPRSNGAGGLTFFAPSEARVESRLYSRQYLEAQLAVALGGRLAEEIMFGEDEVTTGASNDLQQVASIARRMVSQWGMSEKVGPLVVGGGGGGNPFMGRSMGEQADSWGSDIMKEVDDEVERVVNNAYLVGKKILQDNKALLESLALKLIEQETVSAEELSLMITEHNVVMGPYGVYGTDQNREKLPFQRQPASV 1112
            VHARGKPL  DVDLE I+RRTPGFSGAQL+NL+NEAAI AAR  K  I WE +D AVDR++VGLEKK   ++  +K  E+VAYHEAGHAV+GAL+PDYD VQK++I+PRSNGAGGLTFFAP E+R+ES LYS+QYLE+QLAVALGGRLAEEI+FGED VTTGASND+QQVA+IA+RMV +WGMS+ VGP+ +    GG PFMGR MG +   WG+ ++  VD EVER+VNN+YL  KKIL +N+ LL+ LA  L+EQE VSAEE  +MI E+      Y V G ++NR+KLPFQ  P +V
Sbjct:   72 VHARGKPLEPDVDLEAIARRTPGFSGAQLENLMNEAAITAARAGKATIGWEQIDGAVDRIMVGLEKKGGTSTLALKQNELVAYHEAGHAVVGALIPDYDQVQKISIVPRSNGAGGLTFFAPQESRLESGLYSKQYLESQLAVALGGRLAEEIIFGEDLVTTGASNDIQQVANIAKRMVKEWGMSKDVGPVALQSPSGGGPFMGREMGMRRTQWGTKMLGVVDKEVERLVNNSYLTAKKILDENRLLLDHLAKVLVEQEVVSAEEFQMMIVEYGAKTFQYDVIGQERNRDKLPFQALPDNV 371          
BLAST of mRNA_P-wetherbeei_contig5861.1.1 vs. uniprot
Match: A0A7S3PD78_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD78_9STRA)

HSP 1 Score: 392 bits (1007), Expect = 5.020e-128
Identity = 196/298 (65.77%), Postives = 237/298 (79.53%), Query Frame = 3
Query:  219 VHARGKPLASDVDLEGISRRTPGFSGAQLQNLLNEAAIFAARKEKTIIEWEDVDSAVDRLLVGLEKKNAKTSPRMKEIVAYHEAGHAVIGALMPDYDMVQKVTIIPRSNGAGGLTFFAPSEARVESRLYSRQYLEAQLAVALGGRLAEEIMFGEDEVTTGASNDLQQVASIARRMVSQWGMSEKVGPLVVGGGGGGNPFMGRSMGEQADSWGSDIMKEVDDEVERVVNNAYLVGKKILQDNKALLESLALKLIEQETVSAEELSLMITEHNVVMGPYGVYGTDQNREKLPFQRQPASV 1112
            VH+RGKPL  DVDLE ISRRTPGFSGAQL+NL+NEAAI AARK K+ I WE++DSAVDR++VGLEKK      + KE+VAYHEAGHA++GAL+PDYD VQK+TIIPRSNGAGGLTFFAP E+R+ES +YSRQYLE+QLAVALGGRLAEEI++GED VTTGASND+QQVA+IA+RMV +WGMS+KVG + V    GG PFMG  M  +   WG  IM  V++EVER+VNN+YL+ K IL +N+ LLE L   L+EQE VSAEE  +M+ E       Y + G ++NREKLPFQ  PA+V
Sbjct:  376 VHSRGKPLEPDVDLEAISRRTPGFSGAQLENLMNEAAITAARKAKSTIGWEEIDSAVDRIMVGLEKKGGNPQLKQKELVAYHEAGHAIVGALVPDYDQVQKITIIPRSNGAGGLTFFAPQESRLESGMYSRQYLESQLAVALGGRLAEEIIYGEDMVTTGASNDIQQVANIAKRMVKEWGMSDKVGRVAVSEPSGGGPFMGMQMLRRPTQWGGRIMGTVEEEVERLVNNSYLIAKAILTENRDLLEKLKEVLMEQEVVSAEEFQMMLVEFKARTIDYAIIGQERNREKLPFQNLPATV 673          
BLAST of mRNA_P-wetherbeei_contig5861.1.1 vs. uniprot
Match: A0A7S2KA73_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KA73_9STRA)

HSP 1 Score: 389 bits (998), Expect = 3.600e-127
Identity = 197/309 (63.75%), Postives = 241/309 (77.99%), Query Frame = 3
Query:  192 VRNELKLNQVHARGKPLASDVDLEGISRRTPGFSGAQLQNLLNEAAIFAARKEKTIIEWEDVDSAVDRLLVGLEKKNAKTSPRMK--EIVAYHEAGHAVIGALMPDYDMVQKVTIIPRSNGAGGLTFFAPSEARVESRLYSRQYLEAQLAVALGGRLAEEIMFGEDEVTTGASNDLQQVASIARRMVSQWGMSEKVGPLVVGGGGGGNPFMGRSMGEQADSWGSDIMKEVDDEVERVVNNAYLVGKKILQDNKALLESLALKLIEQETVSAEELSLMITEHNVVMGPYGVYGTDQNREKLPFQRQPASV 1112
            V+   ++  VHARGKPL  DVDLE I RRTPGFSGAQL+NL+NEAAI AAR  K+ I WE +D AVDR++VGLEK    T+  +K  E+VAYHEAGHA+ GAL+PDYD VQK++IIPRSNGAGGLTFF+P E R+ES +YS+QYLE+QLAVALGGRLAEE++FGED VTTGASND+QQVA+IA+RMV +WGMSEKVG + +     G PFMGRSMG++  +WGS IM  VD EVER+VNN+YL  KKIL +N  LL+ LA  L+EQE VSAEE  +M+ E N  +  + V G ++NR+KLPFQ  P SV
Sbjct:  325 VQGRARILGVHARGKPLEPDVDLEAIGRRTPGFSGAQLENLMNEAAISAARLGKSTIGWEQIDGAVDRIMVGLEKNGGTTTLSIKQNELVAYHEAGHAICGALIPDYDQVQKISIIPRSNGAGGLTFFSPQEQRLESGMYSKQYLESQLAVALGGRLAEELIFGEDFVTTGASNDIQQVANIAKRMVKEWGMSEKVGLIALSTPQSGGPFMGRSMGQRGTTWGSKIMGNVDSEVERLVNNSYLTAKKILSENMPLLDHLARTLVEQEVVSAEEFQMMLVEFNAKVVEFAVVGEERNRDKLPFQTLPTSV 633          
BLAST of mRNA_P-wetherbeei_contig5861.1.1 vs. uniprot
Match: A0A7S2HUF4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HUF4_9STRA)

HSP 1 Score: 376 bits (965), Expect = 1.570e-126
Identity = 192/300 (64.00%), Postives = 233/300 (77.67%), Query Frame = 3
Query:  219 VHARGKPLASDVDLEGISRRTPGFSGAQLQNLLNEAAIFAARKEKTIIEWEDVDSAVDRLLVGLEKKNAKTSPRMK--EIVAYHEAGHAVIGALMPDYDMVQKVTIIPRSNGAGGLTFFAPSEARVESRLYSRQYLEAQLAVALGGRLAEEIMFGEDEVTTGASNDLQQVASIARRMVSQWGMSEKVGPLVVGGGGGGNPFMGRSMGEQADSWGSDIMKEVDDEVERVVNNAYLVGKKILQDNKALLESLALKLIEQETVSAEELSLMITEHNVVMGPYGVYGTDQNREKLPFQRQPASV 1112
            VHARGKPL  DVDLE I+RRTPGFSGAQL+NL+NEAAI +AR  K+ I WE +D AVDR++VGLEKK    +  +K  E+VAYHEAGHA+ GAL+PDYD VQK++I+PRSNGAGGLTFFAP E+R+ES +YS+QYLE+QLAVALGGRLAEE++FGED VTTGASND+QQVA+IA+RMV +WGMS+ VG + +     G PFMGR MG     WGS IM  VD EVER+VNN+YL  KKIL +N+ LL+ LA  L+EQE VSAEE  +M+ E       Y V G ++NREKLPFQ  PA+ 
Sbjct:   18 VHARGKPLEPDVDLEAIARRTPGFSGAQLENLMNEAAISSARAGKSTIGWEQIDGAVDRIMVGLEKKGGTANLALKQNELVAYHEAGHAICGALIPDYDQVQKISIVPRSNGAGGLTFFAPQESRLESGMYSKQYLESQLAVALGGRLAEELVFGEDFVTTGASNDIQQVANIAKRMVKEWGMSKDVGLVALQTPDSGGPFMGREMGTPRTKWGSRIMGTVDAEVERLVNNSYLTAKKILSENRDLLDHLAKVLVEQEVVSAEEFQMMLVEFGSKTIQYEVVGEERNREKLPFQGMPAAA 317          
BLAST of mRNA_P-wetherbeei_contig5861.1.1 vs. uniprot
Match: A0A7S2UIJ8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIJ8_9STRA)

HSP 1 Score: 377 bits (969), Expect = 4.490e-126
Identity = 189/308 (61.36%), Postives = 237/308 (76.95%), Query Frame = 3
Query:  195 RNELKLNQVHARGKPLASDVDLEGISRRTPGFSGAQLQNLLNEAAIFAARKEKTIIEWEDVDSAVDRLLVGLEKKNAKTSP--RMKEIVAYHEAGHAVIGALMPDYDMVQKVTIIPRSNGAGGLTFFAPSEARVESRLYSRQYLEAQLAVALGGRLAEEIMFGEDEVTTGASNDLQQVASIARRMVSQWGMSEKVGPLVVGGGGGGNPFMGRSMGEQADSWGSDIMKEVDDEVERVVNNAYLVGKKILQDNKALLESLALKLIEQETVSAEELSLMITEHNVVMGPYGVYGTDQNREKLPFQRQPASV 1112
            +   ++  VHARGKPL  DVDLE I+RRTPGFSGA L+NL+NEAAI AAR  KT + W+ +DSAVDR++VGLEKK   ++   + KE+VAYHEAGHAV GALMPDYD VQK+TIIPRSNGAGGLTFFAPS++R+E+ +YS+QYLE+QL VALGGRLAEEI++GED VTTGASND+QQVASIA+RMV +WGMS+ VG + +    GG PFMGR MG     WGS ++ +VD EVER+VNNAY+  K +L +NK LL+ LA  L+ QE VSAEE  +M+ +       Y + G D+NR++LPFQ+ P  V
Sbjct:   84 KGRARILAVHARGKPLEPDVDLEAIARRTPGFSGASLENLMNEAAISAARLNKTTVGWDQIDSAVDRIMVGLEKKGGTSAQVVKQKELVAYHEAGHAVAGALMPDYDQVQKITIIPRSNGAGGLTFFAPSDSRLEAGMYSKQYLESQLVVALGGRLAEEIIYGEDFVTTGASNDIQQVASIAKRMVKEWGMSDLVGRVALQAPSGGGPFMGRQMGTPQTKWGSKLLGDVDAEVERMVNNAYIKCKHVLTENKPLLDHLAKTLVTQEVVSAEEFQMMLVQFKSQTVDYEILGEDRNRDQLPFQKMPTWV 391          
BLAST of mRNA_P-wetherbeei_contig5861.1.1 vs. uniprot
Match: K0RSP2_THAOC (AAA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RSP2_THAOC)

HSP 1 Score: 386 bits (992), Expect = 8.700e-126
Identity = 195/300 (65.00%), Postives = 236/300 (78.67%), Query Frame = 3
Query:  219 VHARGKPLASDVDLEGISRRTPGFSGAQLQNLLNEAAIFAARKEKTIIEWEDVDSAVDRLLVGLEKKN--AKTSPRMKEIVAYHEAGHAVIGALMPDYDMVQKVTIIPRSNGAGGLTFFAPSEARVESRLYSRQYLEAQLAVALGGRLAEEIMFGEDEVTTGASNDLQQVASIARRMVSQWGMSEKVGPLVVGGGGGGNPFMGRSMGEQADSWGSDIMKEVDDEVERVVNNAYLVGKKILQDNKALLESLALKLIEQETVSAEELSLMITEHNVVMGPYGVYGTDQNREKLPFQRQPASV 1112
            VHARGKPL  DVDLE I RRTPGFSGAQL+NL+NEAAI AAR  K+ I WE++DSAVDR++VGLEK    A  S R  E+VAYHEAGHA+ GAL+PDYD VQK++IIPRSNGAGGLTFF+P EAR+ES +YS+QYLE+QLAVALGGRLAEE+++GED VTTGASND+QQVASIA++MV QWGMS+KVG + +     G PFMGRSMG++  SWG  +M E D E+ER+VNN+YL  K IL  N  LL  LA  L+EQE VSAEE  +M+ E N  + PY + G ++NR+KLPFQ  P +V
Sbjct:  373 VHARGKPLEPDVDLEAIGRRTPGFSGAQLENLMNEAAISAARLGKSTIGWEEIDSAVDRIMVGLEKNGGTATLSQRQNELVAYHEAGHALCGALIPDYDQVQKISIIPRSNGAGGLTFFSPQEARLESGMYSKQYLESQLAVALGGRLAEELIYGEDFVTTGASNDIQQVASIAKQMVKQWGMSDKVGLVALDSPQQGGPFMGRSMGQRGTSWGGKVMGEADSEIERLVNNSYLTAKHILSSNMDLLHHLAKTLVEQEVVSAEEFQMMLVEFNSKVVPYKIVGEERNRDKLPFQSLPVNV 672          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5861.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YMI8_9STRA2.240e-14875.34FtsH protease n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A835YNY9_9STRA9.510e-14473.33Metalloprotease n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A7S2WUP6_9STRA4.710e-13366.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1BVA0_9STRA2.730e-13065.22Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2E7S1_9STRA5.310e-13065.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3PD78_9STRA5.020e-12865.77Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2KA73_9STRA3.600e-12763.75Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2HUF4_9STRA1.570e-12664.00Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2UIJ8_9STRA4.490e-12661.36Hypothetical protein n=1 Tax=Attheya septentrional... [more]
K0RSP2_THAOC8.700e-12665.00AAA domain-containing protein n=1 Tax=Thalassiosir... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5861contigP-wetherbeei_contig5861:1981..3480 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog159749.K0RSP2
PFAMsAAA,Peptidase_M41
Model size1169
Max annot lvl2836|Bacillariophyta
KEGG koko:K03798
KEGG ModuleM00742
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.87e-91
EggNOG OGsCOG0465@1|root,KOG0731@2759|Eukaryota,2XBB2@2836|Bacillariophyta
Ec32 ortholog descriptionFtsH protease
Ec32 orthologEc-27_004290.1
DescriptionBelongs to the AAA ATPase family
Cds size678
COG categoryO
BRITEko00000,ko00002,ko01000,ko01002,ko03110
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186867.6025014-UTR-P-wetherbeei_contig5861:1980..20311683186867.6025014-UTR-P-wetherbeei_contig5861:1980..2031Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5861 1981..2031 -
1683186867.6321855-UTR-P-wetherbeei_contig5861:3040..34801683186867.6321855-UTR-P-wetherbeei_contig5861:3040..3480Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5861 3041..3480 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186867.61633-CDS-P-wetherbeei_contig5861:2031..26281683186867.61633-CDS-P-wetherbeei_contig5861:2031..2628Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5861 2032..2628 -
1683186867.6242814-CDS-P-wetherbeei_contig5861:2959..30401683186867.6242814-CDS-P-wetherbeei_contig5861:2959..3040Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5861 2960..3040 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5861.1.1prot_P-wetherbeei_contig5861.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5861 2032..3040 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5861.1.1

>prot_P-wetherbeei_contig5861.1.1 ID=prot_P-wetherbeei_contig5861.1.1|Name=mRNA_P-wetherbeei_contig5861.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=226bp
MKEIVAYHEAGHAVIGALMPDYDMVQKVTIIPRSNGAGGLTFFAPSEARV
ESRLYSRQYLEAQLAVALGGRLAEEIMFGEDEVTTGASNDLQQVASIARR
MVSQWGMSEKVGPLVVGGGGGGNPFMGRSMGEQADSWGSDIMKEVDDEVE
RVVNNAYLVGKKILQDNKALLESLALKLIEQETVSAEELSLMITEHNVVM
GPYGVYGTDQNREKLPFQRQPASVM*
back to top

mRNA from alignment at P-wetherbeei_contig5861:1981..3480-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5861.1.1 ID=mRNA_P-wetherbeei_contig5861.1.1|Name=mRNA_P-wetherbeei_contig5861.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1500bp|location=Sequence derived from alignment at P-wetherbeei_contig5861:1981..3480- (Phaeothamnion wetherbeei SAG_119_79)
CTCGAATAATAGCGATTTGAAATACAAGTTTTATTCCACGTTTTGTTTTA AACTTGGCACATCGACTCATCGCCCTTCGATCCCGCTTCTATGCGCACCT TTCTGCCGCCGCCCGTGTCTCCTGCCGGCCGCTTCTACATCACTTTCCAC ATCTACTTTCTCCAACCCTTCTCTTCCGAACCAAAACTTGTGTCCGAAAC GAACTCAAATTAAACCAGGTGCACGCCCGCGGCAAGCCGCTGGCGTCGGA CGTGGACCTGGAGGGCATCTCGCGGCGGACGCCGGGCTTCTCTGGCGCGC AGCTGCAAAACCTCCTGAACGAGGCGGCGATCTTTGCGGCGCGCAAGGAG AAAACCATCATCGAGTGGGAGGACGTAGACTCAGCGGTGGACCGGCTGCT GGTCGGGCTTGAGAAGAAGAACGCGAAGACGTCGCCGCGGATGAAGGAGA TTGTGGCGTACCACGAGGCGGGCCACGCAGTCATCGGCGCCCTCATGCCC GACTACGACATGGTCCAGAAGGTGCGTTAGTCTACTCTAAGCGTCTTTTG AAATAACGAAAACGTCGTCGTTCTTGCACTCGGCTGGGCGGCTGCGTCGT GGAGATGACCTTTTTTTCCCATTAGTAGGCGCTTCGACGTGGCTGGGGCG GCAGTGGCGCTCCCTCTTTCTATTTGTTACACCGTGCTTTCATTTTTTGC CTCGGCGGTCCGGCTCAAAGAGGCGTGCACTTTGTTTGTTTGCATGTCGA GTATTCAACTTTTGAAACAAGTATCTTCTGACTGTACATGCTCACCCAAT TTCTTTCATTTCCTCTTCCCTTCTGTCGCTACCCGCGTGCCGCCCCTGCC AGGTGACCATCATCCCGCGGTCGAACGGCGCCGGAGGCCTGACCTTCTTC GCCCCGAGCGAGGCGCGTGTCGAGTCCCGCCTCTACTCGCGCCAATACCT CGAGGCTCAGCTGGCCGTCGCTCTCGGCGGCCGCCTCGCTGAGGAGATCA TGTTCGGCGAGGACGAGGTCACAACGGGCGCGTCGAACGACCTGCAACAG GTGGCCAGTATTGCCCGGCGGATGGTGTCGCAGTGGGGCATGAGCGAGAA GGTCGGCCCGCTGGTGGTGGGCGGCGGCGGCGGCGGCAACCCGTTCATGG GACGGTCGATGGGGGAGCAGGCCGACTCGTGGGGGTCGGACATCATGAAG GAAGTCGATGACGAGGTGGAGCGCGTCGTCAACAATGCGTACTTGGTCGG CAAGAAGATCCTGCAGGACAACAAGGCTCTGCTCGAGTCGCTGGCGCTCA AGCTCATTGAGCAGGAGACGGTGTCGGCGGAGGAGCTGTCGCTCATGATC ACTGAGCACAATGTGGTCATGGGGCCGTACGGCGTCTACGGCACCGACCA AAACCGCGAGAAGCTGCCGTTCCAGCGGCAACCGGCCTCGGTCATGTGAA GCGGCGGTGAGCAGAACGGGCGCTGAGGCTGACGGGGCAGGCAGGCAGGT
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig5861:1981..3480-

>mRNA_P-wetherbeei_contig5861.1.1 ID=mRNA_P-wetherbeei_contig5861.1.1|Name=mRNA_P-wetherbeei_contig5861.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig5861:1981..3480- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGAGATTGTGGCGTACCACGAGGCGGGCCACGCAGTCATCGGCGC
CCTCATGCCCGACTACGACATGGTCCAGAAGGTGACCATCATCCCGCGGT
CGAACGGCGCCGGAGGCCTGACCTTCTTCGCCCCGAGCGAGGCGCGTGTC
GAGTCCCGCCTCTACTCGCGCCAATACCTCGAGGCTCAGCTGGCCGTCGC
TCTCGGCGGCCGCCTCGCTGAGGAGATCATGTTCGGCGAGGACGAGGTCA
CAACGGGCGCGTCGAACGACCTGCAACAGGTGGCCAGTATTGCCCGGCGG
ATGGTGTCGCAGTGGGGCATGAGCGAGAAGGTCGGCCCGCTGGTGGTGGG
CGGCGGCGGCGGCGGCAACCCGTTCATGGGACGGTCGATGGGGGAGCAGG
CCGACTCGTGGGGGTCGGACATCATGAAGGAAGTCGATGACGAGGTGGAG
CGCGTCGTCAACAATGCGTACTTGGTCGGCAAGAAGATCCTGCAGGACAA
CAAGGCTCTGCTCGAGTCGCTGGCGCTCAAGCTCATTGAGCAGGAGACGG
TGTCGGCGGAGGAGCTGTCGCTCATGATCACTGAGCACAATGTGGTCATG
GGGCCGTACGGCGTCTACGGCACCGACCAAAACCGCGAGAAGCTGCCGTT
CCAGCGGCAACCGGCCTCGGTCATGTGA
back to top