mRNA_P-wetherbeei_contig5858.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5858.1.1 vs. uniprot
Match: A0A835Z9M2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9M2_9STRA) HSP 1 Score: 563 bits (1451), Expect = 1.320e-198 Identity = 267/319 (83.70%), Postives = 288/319 (90.28%), Query Frame = 1
Query: 1 QDDVNLYMVMEFLPGGDLMSLLMKEDTFPEAATRTYMAEMILAVASVHSLGYIHRDLKPDNILLDWQGHLKLTDLGLSKKVEIDASYFGATPEDINVNAAAAREDNRPMP--KPGHVRGATNVPRDRKLAYSTVGTPDYIAPEVLSQKGYGPECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFFDVPDHVSRNLSPECMDFMLSFVCNADARLGKTGMDEIRGHPWFAAVDWDGLRAAPAPYKPERADEMASLLEQVKALDASDARLPAVVNQITANFDDFEEEDASRFGGSKKNGRRDKDNDFVGYTYKR 951
QDD+NLYMVMEFLPGGDLMSLLMKEDTFPE ATR YMAEMI AVA VH LGY+HRDLKPDNILLDWQGHLKLTDLGLSKKVEIDA YFGATPED+NVNAAAAR D RP+P K HVRG TN+PRDRKLAYSTVGTPDYIAPEVLSQKGYGPECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFFDVPDH+SR LS CMDF+LSFVCNAD+RLG+T MDEIR HPWFA +DW LRAAPAPYKP+RAD++ LLEQ++ LDA D R+ A VNQ+T+NFDDFEEED SR+GG KK GRRDKDNDFVGYT++R
Sbjct: 169 QDDINLYMVMEFLPGGDLMSLLMKEDTFPEGATRQYMAEMIQAVACVHGLGYVHRDLKPDNILLDWQGHLKLTDLGLSKKVEIDAGYFGATPEDLNVNAAAARLDTRPLPDRKATHVRGQTNLPRDRKLAYSTVGTPDYIAPEVLSQKGYGPECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFFDVPDHISRALSTSCMDFLLSFVCNADSRLGRTSMDEIRSHPWFAGLDWGALRAAPAPYKPDRADQIGGLLEQIRTLDARDGRMAAAVNQLTSNFDDFEEEDQSRWGGQKKVGRRDKDNDFVGYTFRR 487
BLAST of mRNA_P-wetherbeei_contig5858.1.1 vs. uniprot
Match: A0A836CMY7_9STRA (Serine/threonine-protein kinase 38 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMY7_9STRA) HSP 1 Score: 552 bits (1422), Expect = 2.750e-194 Identity = 264/322 (81.99%), Postives = 290/322 (90.06%), Query Frame = 1
Query: 1 QDDVNLYMVMEFLPGGDLMSLLMKEDTFPEAATRTYMAEMILAVASVHSLGYIHRDLKPDNILLDWQGHLKLTDLGLSKKVEIDASYFGATPEDINVNAAAAREDNRPMP--KPGHVRGATNVPRDRKLAYSTVGTPDYIAPEVLSQKGYGPECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFFDVPDHVSRNLSPECMDFMLSFVCNADARLGKTGMDEIRGHPWFAAVDWDG--LRAAPAPYKPERADEMASLLEQVKALDASDARLPAVVNQITANFDDFEEEDASRFGGSKKNGRRDKDNDFVGYTYKRK 954
QDD+NLYM MEFLPGGDLMSLLMKEDTFPEAAT+ YMAEMI AVA VH+LGYIHRDLKPDNILLDWQGHLKLTDLGLSKKVEIDASYFGATPED+NVNAAAAR D RP+P K HVRG TN+PRDRKLAYSTVGTPDYIAPEVLSQKGYGPECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQF DVPDHVSR LSP+C++FM+SFVCNA++RLG+T MDEIR HPWFA +DW LR+APAPYKP+ AD +A+LL ++ L+ SDAR+ A VNQ+TANFDDFEEE+ SR+GG KK GRRDKDNDFVGYTY R+
Sbjct: 166 QDDINLYMAMEFLPGGDLMSLLMKEDTFPEAATKQYMAEMIQAVACVHALGYIHRDLKPDNILLDWQGHLKLTDLGLSKKVEIDASYFGATPEDLNVNAAAARLDTRPLPDRKATHVRGQTNLPRDRKLAYSTVGTPDYIAPEVLSQKGYGPECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFLDVPDHVSRALSPQCLEFMMSFVCNAESRLGRTSMDEIRNHPWFAGLDWTSASLRSAPAPYKPDGADSIAALLSSIRTLEPSDARMAAAVNQLTANFDDFEEEETSRWGGQKKVGRRDKDNDFVGYTYSRR 487
BLAST of mRNA_P-wetherbeei_contig5858.1.1 vs. uniprot
Match: D8LEW4_ECTSI (Serine/threonine-protein kinase 38 (Ndr2 protein kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW4_ECTSI) HSP 1 Score: 412 bits (1058), Expect = 3.980e-140 Identity = 197/247 (79.76%), Postives = 215/247 (87.04%), Query Frame = 1
Query: 1 QDDVNLYMVMEFLPGGDLMSLLMKEDTFPEAATRTYMAEMILAVASVHSLGYIHRDLKPDNILLDWQGHLKLTDLGLSKKVEIDASYFGATPEDINVNAAAAREDNRPMP-KP-GHVRGATNVP---------RDRKLAYSTVGTPDYIAPEVLSQKGYGPECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFFDVPDHVSRNLSPECMDFMLSFVCNADARLGKTGMDEIRGHPWFAAV 708
QDD+NLYM+MEFLPGGDLMSLLMKED FPE ATR YMAEMI+AVA+VH LGYIHRDLKPDNILLDWQGHLKLTDLGLSKKVEI SYFG PED+NV+AAAARED RPMP KP GHVRG T + +DRKLA+STVGTPDYIAPEVL+QKGYG ECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFF+VPD+V R LSPECMDFM+SFVC + RLG+ MDEI+ HPWFA++
Sbjct: 166 QDDINLYMIMEFLPGGDLMSLLMKEDIFPEVATRQYMAEMIVAVATVHRLGYIHRDLKPDNILLDWQGHLKLTDLGLSKKVEISPSYFGVKPEDLNVHAAAAREDTRPMPAKPVGHVRGHTGIQGPNKGNKVNKDRKLAFSTVGTPDYIAPEVLAQKGYGAECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFFNVPDNVVRKLSPECMDFMMSFVCESSTRLGRQNMDEIKSHPWFASL 412
BLAST of mRNA_P-wetherbeei_contig5858.1.1 vs. uniprot
Match: A0A6H5KD50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD50_9PHAE) HSP 1 Score: 405 bits (1040), Expect = 2.350e-135 Identity = 213/331 (64.35%), Postives = 246/331 (74.32%), Query Frame = 1
Query: 1 QDDVNLYMVMEFLPGGDLMSLLMKEDTFPEAATRTYMAEMILAVASVHSLGYIHRDLKPDNILLDWQGHLKLTDLGLSKK-VEIDASYFGATPEDINVNAAAAREDNRPMP-KP-GHVRGATN---------VPRDRKLAYSTVGTPDYIAPEVLSQKGYGPECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFFDVPDHVSRNLSPECMDFMLSFVCNADARLGKTGMDEIRGHPWFAAVDWDGLRAAPAPYKPERADEMASLLEQVKALDASDARLPAVVNQITANFDDFEEEDASRFGGSKKNGRR-DKDNDFVGYTYKRK 954
QDD+NLYM+MEFLPGGDLMSLLMKED FPEAAT+ + + +H P L + + VEI SYFG PED+NV+AAAARED RPMP KP GHVRG T V +DRKLA+STVGTPDYIAPEVL+QKGYG ECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFF+VPD+V R LSPECMDFM+SFVC + RLG+ MDEI+ HPWFA+++W+ LR PAPYKP+ AD+M+ LLE VK + A+D +P +V +ITANFDDF+EEDA+RFGG KK RR DKDN FVGYTYKRK
Sbjct: 166 QDDINLYMIMEFLPGGDLMSLLMKEDIFPEAATKQAIHGRDDRCCRNRARLGLH---PPRPEARQHPARLAGSPQAYGPRAVEISPSYFGVKPEDLNVHAAAAREDTRPMPAKPVGHVRGHTGMQGPNKGNKVNKDRKLAFSTVGTPDYIAPEVLAQKGYGAECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFFNVPDNVVRKLSPECMDFMMSFVCESSTRLGRQNMDEIKSHPWFASLNWNTLRDGPAPYKPDGADDMSVLLESVKHVAATDPEMPRLVKKITANFDDFKEEDATRFGGQKKVVRRGDKDNHFVGYTYKRK 493
BLAST of mRNA_P-wetherbeei_contig5858.1.1 vs. uniprot
Match: A0A7R9YG78_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG78_9STRA) HSP 1 Score: 387 bits (995), Expect = 9.540e-130 Identity = 186/318 (58.49%), Postives = 241/318 (75.79%), Query Frame = 1
Query: 1 QDDVNLYMVMEFLPGGDLMSLLMKEDTFPEAATRTYMAEMILAVASVHSLGYIHRDLKPDNILLDWQGHLKLTDLGLSKKVEIDASYFGATPEDINVNAAAAREDNRPMPKPGHVRGATNVPRDRKLAYSTVGTPDYIAPEVLSQKGYGPECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFFDVPDHVSRNLSPECMDFMLSFVCNADARLGKTGMDEIRGHPWFAAVDWDGLRAAPAPYKPERADEMASLLEQVKALDASDARLPAVVNQITANFDDFEEEDASRFGGSKKNGRRDKDNDFVGYTYKRK 954
QD+ NLYMVMEFLPGGDLM+LLM+EDTFPE T+ YMAEM LAVASVHSL YIHRDLKPDN+LLDW GHLKLTDLGL KKV++ + +++ AA+ E + G R+R L YSTVGTPDYIAPEVLSQ+GY CDWWSLGVIMYECLVGYTPFYAD+P+MTCRKILRW++F ++P ++LSPEC+DF+LS + +AD R+G+ G++EI+ HPWF +DW+ LRA PAPY+PE ++ + LL +++ +D +D R ++ QIT NFD+F+EE +GG K+ + D++NDF+GY++KRK
Sbjct: 153 QDETNLYMVMEFLPGGDLMTLLMREDTFPEDKTKIYMAEMCLAVASVHSLNYIHRDLKPDNVLLDWDGHLKLTDLGLCKKVDVPEAKGIDIASEVSA-AASEGEGKSSLVVERSNAGKKKTHRERHLVYSTVGTPDYIAPEVLSQQGYDHSCDWWSLGVIMYECLVGYTPFYADEPIMTCRKILRWRKFLEIPAATQQSLSPECVDFLLSLMTSADRRVGRHGIEEIKEHPWFRGMDWENLRAQPAPYRPEGSEVLRDLLAELETVDVNDRRYRLLIEQITTNFDNFDEE--GNWGG-KRRMKIDRNNDFLGYSFKRK 466
BLAST of mRNA_P-wetherbeei_contig5858.1.1 vs. uniprot
Match: A0A7S1TZ34_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZ34_9STRA) HSP 1 Score: 384 bits (987), Expect = 1.650e-128 Identity = 188/319 (58.93%), Postives = 236/319 (73.98%), Query Frame = 1
Query: 1 QDDVNLYMVMEFLPGGDLMSLLMKEDTFPEAATRTYMAEMILAVASVHSLGYIHRDLKPDNILLDWQGHLKLTDLGLSKKVEI-DASYFGATPEDINVNAAAAREDNRPMPKPGHVRGATNVPRDRKLAYSTVGTPDYIAPEVLSQKGYGPECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFFDVPDHVSRNLSPECMDFMLSFVCNADARLGKTGMDEIRGHPWFAAVDWDGLRAAPAPYKPERADEMASLLEQVKALDASDARLPAVVNQITANFDDFEEEDASRFGGSKKNGRRDKDNDFVGYTYKRK 954
QDD +LYMVMEFLPGGDLM+LLM+EDTF E TR YMAEM LAVASVH+L YIHRDLKPDN+LLDW GHLKLTDLGL KKV++ +A + E + G R R+R L YSTVGTPDYIAPEVLSQ+GY CDWWSLGVIMYECLVGYTPFYAD+P+MTCRKILRW++F ++P + LS EC+DF+LS + AD RLG+ G+DEI+ HPWF+ +DWD LR+ PAPY+PE ++ + LL +++ +D SDAR ++ QIT NFD+F+EE ++GG K+ R D+D +F+GY++KRK
Sbjct: 151 QDDTHLYMVMEFLPGGDLMTLLMREDTFTEDKTRVYMAEMCLAVASVHALQYIHRDLKPDNVLLDWDGHLKLTDLGLCKKVDVPEARGLDLSAEXXXXXXXXXXXSEMVVETSGSGR---KTHRERHLVYSTVGTPDYIAPEVLSQQGYNHSCDWWSLGVIMYECLVGYTPFYADEPIMTCRKILRWRKFLEIPAATQQKLSSECVDFLLSLMTAADRRLGRNGIDEIKAHPWFSGLDWDNLRSQPAPYRPEGSEVLRDLLGELEGVDKSDARYEILLEQITLNFDNFDEE--GKWGGRKRIRRGDRDANFLGYSFKRK 464
BLAST of mRNA_P-wetherbeei_contig5858.1.1 vs. uniprot
Match: W7TRL9_9STRA (Serine threonine-protein kinase cbk1 n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRL9_9STRA) HSP 1 Score: 382 bits (980), Expect = 1.100e-126 Identity = 194/351 (55.27%), Postives = 243/351 (69.23%), Query Frame = 1
Query: 1 QDDVNLYMVMEFLPGGDLMSLLMKEDTFPEAATRTYMAEMILAVASVHSLGYIHRDLKPDNILLDWQGHLKLTDLGLSKKVEIDASYFGATPEDINVNAAAAREDNRPMPK-------PGHVR------------------GATNVP-----RDRKLAYSTVGTPDYIAPEVLSQKGYGPECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFFDVPDHVSRNLSPECMDFMLSFVCNADARLGKTGMDEIRGHPWF--AAVDWDGLRAAPAPYKPERADEMASLLEQVKALDASDARLPAVVNQITANFDDFEEEDAS--RFGGSKKNGRRDKDNDFVGYTYKR 951
QDD L+MVMEFLPGGDLM+LL++EDTFPEAATR YMAEMI+AVASVH+LGYIHRDLKPDNILLDW+GHLKL+D+GL KK+E ++ ++++A+ P P P H +++P RDR+LAYSTVGTPDYIAPEVL QKGYG ECDWWSLGVIMYECLVGYTPFYA++PVMTCRKILRWQQ +VP V +SP C+DFM S + A+ RLG+ G +EI+ HPWF + +DWD L+ APAPYKPE + + ++LE ++ + D R ++ QITANFDDF E + GG GR++K ++F+GYTYKR
Sbjct: 166 QDDHMLHMVMEFLPGGDLMTLLIREDTFPEAATRQYMAEMIMAVASVHALGYIHRDLKPDNILLDWEGHLKLSDMGLCKKMETGEAHLLTDNASLSIHASPHGAGACPTPPASAHFAPPPHXXPHPQYXXXXXXXXXXXXXSTSSLPPSSPARDRRLAYSTVGTPDYIAPEVLMQKGYGKECDWWSLGVIMYECLVGYTPFYAEEPVMTCRKILRWQQHLEVPGEVRARVSPACLDFMFSLMAPAERRLGRHGWEEIKAHPWFVESGLDWDALKTAPAPYKPEGWEVLRAMLEDLRQVPKEDVRYRPLLEQITANFDDFPETEGGLGAVGGGGAAGRKEKGHEFIGYTYKR 516
BLAST of mRNA_P-wetherbeei_contig5858.1.1 vs. uniprot
Match: A0A812SRU8_SYMMI (STK38L protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SRU8_SYMMI) HSP 1 Score: 376 bits (965), Expect = 6.940e-125 Identity = 192/356 (53.93%), Postives = 245/356 (68.82%), Query Frame = 1
Query: 1 QDDVNLYMVMEFLPGGDLMSLLMKEDTFPEAATRTYMAEMILAVASVHSLGYIHRDLKPDNILLDWQGHLKLTDLGLSKKVEIDASYFGATPED--INVNAAAAREDNRPMPKPGHVRGATNVP------------------------------------RDRKLAYSTVGTPDYIAPEVLSQKGYGPECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFFDVPDHVSRNLSPECMDFMLSFVCNADARLGKTGMDEIRGHPWFAAVDWDGLRAAPAPYKPERADEMASLLEQVKALDASDARLPAVVNQITANFDDFEEEDASRFGGSKKNGRRDKDNDFVGYTYKRK 954
QD+ NLYMVME+LPGGDLM LLM+EDTF EAAT+ Y+AE++ AV+SVH+LGYIHRDLKPDN+LLDW GHLKLTDLGL KKV++ G P+ IN++AAAA D++ G + + P RDR L YSTVGTPDYIAPEVL Q+GYG CDWWSLGVIMYECLVGYTPFYA++PV+TCRKILRWQQF +VP V LSPEC++F+ S + +A R+GK G+D IR HPWF +DWD LR PAPY PE + +M S L++++ +D+S + +++ QIT NFD FE+ D + + SK R+D+D++F+GYT+KRK
Sbjct: 160 QDNRNLYMVMEYLPGGDLMGLLMREDTFSEAATKFYIAELVQAVSSVHALGYIHRDLKPDNVLLDWNGHLKLTDLGLCKKVDMGPDD-GPAPDAAAINMHAAAALGDSKIGASAGVPKSDADCPSSKTQAMDTSAPSSTPAASELEPSASSAPGGTKPTHRDRGLVYSTVGTPDYIAPEVLLQRGYGKTCDWWSLGVIMYECLVGYTPFYAEEPVLTCRKILRWQQFLEVPTDVEGTLSPECLNFLFSLMTDASKRIGKNGVDSIRAHPWFDGLDWDTLRDQPAPYTPEGSIQMKSALQELRDVDSSSPKFRSLLAQITTNFDKFED-DGNLWCSSKAVTRKDRDHEFIGYTFKRK 513
BLAST of mRNA_P-wetherbeei_contig5858.1.1 vs. uniprot
Match: A0A835ZB71_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB71_9STRA) HSP 1 Score: 343 bits (879), Expect = 1.910e-115 Identity = 158/197 (80.20%), Postives = 174/197 (88.32%), Query Frame = 1
Query: 322 PMP--KPGHVRGATNVPRDRKLAYSTVGTPDYIAPEVLSQKGYGPECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFFDVPDHVSRNLSPECMDFMLSFVCNADARLGKTGMDEIRGHPWFAAVDWDGLRAAPAPYKPERADEMASLLEQVKALDASDARLPAVVNQITANFDDFEEEDASRFGGSKKNG 906
P+P K HVRG TN+PRDRKLAYSTVGTPDYIAPEVLSQKGYGPECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFFDVPDH+SR LS CMDF+LSFVCNAD+RLG+T MDEIR HPWFA +DW LRAAPAPYKP+RAD++ LLEQ++ LDA D R+ A VNQ+T+NFDDFEEED SR+GG KK G
Sbjct: 28 PLPDRKATHVRGQTNLPRDRKLAYSTVGTPDYIAPEVLSQKGYGPECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFFDVPDHISRALSTSCMDFLLSFVCNADSRLGRTSMDEIRSHPWFAGLDWGALRAAPAPYKPDRADQIGGLLEQIRTLDARDGRMAAAVNQLTSNFDDFEEEDQSRWGGQKKVG 224
BLAST of mRNA_P-wetherbeei_contig5858.1.1 vs. uniprot
Match: A0A835Z234_9STRA (NDR and related serine/threonine kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z234_9STRA) HSP 1 Score: 352 bits (902), Expect = 2.600e-115 Identity = 183/331 (55.29%), Postives = 224/331 (67.67%), Query Frame = 1
Query: 4 DDVNLYMVMEFLPGGDLMSLLMKEDTFPEAATRTYMAEMILAVASVHSLGYIHRDLKPDNILLDWQGHLKLTDLGLSKKVEIDA--SYFGATPEDINVNAAAAREDNRPMPKPGH---VRGATNVP---RDRKLAYSTVGTPDYIAPEVLSQKGYGPECDWWSLGVIMYECLVGYTPFYADDPVMTCRKILRWQQFFDVPDHVSRNLSPECMDFMLSFVCNADARLGKTGMDEIRGHPWFA---AVDWDGLRAAPAPYKPERADEMASLLEQVKALDASDARLPAVVNQITANFDDFEE----EDASRFGGSKKNGRRDKDNDFVGYTYKR 951
DD+NLYMVME+LPGGDLM LLMK DTF EAATR YMAE +A+A VH LGYIHRDLKPDNIL+DW GH+KLTDLGL ++E D + F T +++++A P G +G T P RDR L YSTVGTPDYIAPEVL QKGYG ECDWWSLGVIMYECLVGYTPFYA+DPV TCRKIL W++F +VP + +S C+DF+L+ V +A+ARLG+ G+ +I H WFA +DW +R +PY PE + A LLE+++ D A V +TANF+ FEE E +R RRDKD +F+GYTYKR
Sbjct: 162 DDINLYMVMEYLPGGDLMGLLMKHDTFSEAATRMYMAETAMAIAHVHELGYIHRDLKPDNILIDWTGHVKLTDLGLCTRIEQDPMLNVFDVTKHGMDIDSADITSPPPPTVPTGQGVWAKGNTPPPPTHRDRALVYSTVGTPDYIAPEVLLQKGYGKECDWWSLGVIMYECLVGYTPFYAEDPVTTCRKILNWRRFLEVPREAAAAVSSLCIDFLLALVTDAEARLGRRGLGDIMAHAWFADWAGMDWSRIRELRSPYIPEGSARRAELLERLRXXXXGDEGFAAAVAALTANFEKFEESGLWEQPNRAAH-----RRDKDQNFIGYTYKR 487 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5858.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5858.1.1 >prot_P-wetherbeei_contig5858.1.1 ID=prot_P-wetherbeei_contig5858.1.1|Name=mRNA_P-wetherbeei_contig5858.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=311bp MVMEFLPGGDLMSLLMKEDTFPEAATRTYMAEMILAVASVHSLGYIHRDLback to top mRNA from alignment at P-wetherbeei_contig5858:298..2628+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5858.1.1 ID=mRNA_P-wetherbeei_contig5858.1.1|Name=mRNA_P-wetherbeei_contig5858.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2331bp|location=Sequence derived from alignment at P-wetherbeei_contig5858:298..2628+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5858:298..2628+ >mRNA_P-wetherbeei_contig5858.1.1 ID=mRNA_P-wetherbeei_contig5858.1.1|Name=mRNA_P-wetherbeei_contig5858.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=933bp|location=Sequence derived from alignment at P-wetherbeei_contig5858:298..2628+ (Phaeothamnion wetherbeei SAG_119_79)back to top |