mRNA_P-wetherbeei_contig5857.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5857.2.1
Unique NamemRNA_P-wetherbeei_contig5857.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5857.2.1 vs. uniprot
Match: A0A3C0TVQ0_9PROT (2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TVQ0_9PROT)

HSP 1 Score: 428 bits (1100), Expect = 3.790e-150
Identity = 214/255 (83.92%), Postives = 232/255 (90.98%), Query Frame = 1
Query:    1 VLDLFDLTGKVAIVTGGNGGLGLGIARGLARAGAAVAIVGRNQEKLDKAYENLKGIGPKILRVRADVSVEDDVHRMVKETVAALGRVDILFNNAAVSYGHSAERISLEEWNRFLAINLTSVMLCSQACYPEFIKVGGGKIINIGSIITQHMGHPKLIAYAAAKGGMDHMTQSLAVAWGPQNIQVNCVLPGLVDSEMMPCEGPNKQSKIIDYVVEKSPVRRYGIPDDFQALSILLASPASSFITGALIVADGGLSL 765
            +LD+F+L GKVAIVTGGNGG+GLGIARGLA AGAAVAIVGR Q+KLD+AYENLKGIGPKILRV+ADVS E+DV RMVKETV  LGRVDILFNNAAVSYGH+A  + L EWN  LAINLTSV+LCSQA YPEF K GGGKIINIGSIITQ MGHPKLIAYAAAKGGMDHMTQSLAVAWGP NIQVNCVLPGLVDSEMMPCEGPNKQSK+ID +V  SPVRRYG+PDDFQALS+ LAS AS+F+TG+LIVADGGLSL
Sbjct:    1 MLDIFNLAGKVAIVTGGNGGIGLGIARGLANAGAAVAIVGRKQDKLDRAYENLKGIGPKILRVQADVSREEDVRRMVKETVEGLGRVDILFNNAAVSYGHNAASLPLAEWNNLLAINLTSVLLCSQAVYPEFKKAGGGKIINIGSIITQQMGHPKLIAYAAAKGGMDHMTQSLAVAWGPDNIQVNCVLPGLVDSEMMPCEGPNKQSKMIDQIVRVSPVRRYGVPDDFQALSVFLASRASNFVTGSLIVADGGLSL 255          
BLAST of mRNA_P-wetherbeei_contig5857.2.1 vs. uniprot
Match: A0A3C0TV03_9PROT (2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TV03_9PROT)

HSP 1 Score: 423 bits (1088), Expect = 2.460e-148
Identity = 205/255 (80.39%), Postives = 234/255 (91.76%), Query Frame = 1
Query:    1 VLDLFDLTGKVAIVTGGNGGLGLGIARGLARAGAAVAIVGRNQEKLDKAYENLKGIGPKILRVRADVSVEDDVHRMVKETVAALGRVDILFNNAAVSYGHSAERISLEEWNRFLAINLTSVMLCSQACYPEFIKVGGGKIINIGSIITQHMGHPKLIAYAAAKGGMDHMTQSLAVAWGPQNIQVNCVLPGLVDSEMMPCEGPNKQSKIIDYVVEKSPVRRYGIPDDFQALSILLASPASSFITGALIVADGGLSL 765
            +L+  DL+GKVAIVTGGNGGLGLG+ARG+A AGAAVAIVGRN EKL+ AYE+LKGIGPKILRV+ADVS +DDV+RMVKETVAALGRVDILFNNAA+SYGH A R++LEEWN F+AI+LTSV LC QA YPEF+KVGGGKIINIGS IT+ MGHPKLIAYAA+KGGMDHMTQSLA AWGP NIQVNCVLPGLVDSEMMPCEGP KQS+++D+ ++ SPVRRYG+PDDFQ ++I LASPASSFITG+LIVADGGL+L
Sbjct:    1 MLEALDLSGKVAIVTGGNGGLGLGLARGMANAGAAVAIVGRNMEKLEAAYEDLKGIGPKILRVQADVSKQDDVNRMVKETVAALGRVDILFNNAAISYGHDAARMTLEEWNNFIAIDLTSVFLCCQAVYPEFLKVGGGKIINIGSAITKQMGHPKLIAYAASKGGMDHMTQSLAAAWGPDNIQVNCVLPGLVDSEMMPCEGPRKQSRVVDWAIQNSPVRRYGVPDDFQGIAIFLASPASSFITGSLIVADGGLTL 255          
BLAST of mRNA_P-wetherbeei_contig5857.2.1 vs. uniprot
Match: A0A352Q6F9_9GAMM (2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A352Q6F9_9GAMM)

HSP 1 Score: 359 bits (921), Expect = 6.330e-123
Identity = 185/256 (72.27%), Postives = 215/256 (83.98%), Query Frame = 1
Query:    4 LDLFDLTGKVAIVTGGNGGLGLGIARGLARAGAAVAIVGRNQEKLDKAYENLKGIGPKILRVRADVSVEDDVHRMVKETVAALGRVDILFNNAAVSYGHSAERISLEEWNRFLAINLTSVMLCSQACYPEFIKVGGGKIINIGSIITQHMGHPKLIAYAAAKGGMDHMTQSLAVAWGPQNIQVNCVLPGLVDSEMMPCEGPNKQSKIIDYVVEKSPVRRYGIPDDFQALSILLASPASSFITGALIVADGGLSLSM 771
            +++FDL+GKVAIVTGGNGGLGLGIARGLA AGAAVAIVGRN +KL  A  +L+  G K+L V+ADVS EDDV+RMV ETV   GRVDILFNNAA+S+G   E ++LEEWN+FLAI+LTS  L S+ACYPEF+KVGGGKIINIGSIIT+ +GHPKLI YAAAKGGMDHMTQSLA AWGPQNIQVN VLPGLVDSEMMP   P +QS II Y ++KS   R+G PDDF  +SILL+SPAS FITG++IV DGGLSL++
Sbjct:    1 MEIFDLSGKVAIVTGGNGGLGLGIARGLASAGAAVAIVGRNADKLKSAVADLEAGGAKVLPVQADVSDEDDVNRMVAETVERFGRVDILFNNAAISWGIRPEEMTLEEWNKFLAIDLTSCFLTSKACYPEFLKVGGGKIINIGSIITK-LGHPKLIQYAAAKGGMDHMTQSLARAWGPQNIQVNAVLPGLVDSEMMPVGLPEEQSPIIKYAIKKSACNRHGTPDDFAGISILLSSPASDFITGSIIVVDGGLSLAI 255          
BLAST of mRNA_P-wetherbeei_contig5857.2.1 vs. uniprot
Match: A0A3B9ABX6_9GAMM (2-deoxy-D-gluconate 3-dehydrogenase n=2 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A3B9ABX6_9GAMM)

HSP 1 Score: 352 bits (903), Expect = 3.720e-120
Identity = 168/257 (65.37%), Postives = 214/257 (83.27%), Query Frame = 1
Query:    4 LDLFDLTGKVAIVTGGNGGLGLGIARGLARAGAAVAIVGRNQEKLDKAYENLKGIGPKILRVRADVSVEDDVHRMVKETVAALGRVDILFNNAAVSYGHSAERISLEEWNRFLAINLTSVMLCSQACYPEFIKVGGGKIINIGSIITQHMGHPKLIAYAAAKGGMDHMTQSLAVAWGPQNIQVNCVLPGLVDSEMMPCEGPNKQSKIIDYVVEKSPVRRYGIPDDFQALSILLASPASSFITGALIVADGGLSLSMM 774
            ++ FDL+GKVAI+TGGNGGLGLGIA+GLA  G AVA+VGRNQEK+DKA   ++ IG + + V+ADVS EDDV+RMVKET   LGRVDILFNNAA+S+G   E+++LEEW++F+AI+LTS  LC++ACYPE +K GGGKIIN+GS IT + G  KL+ YAAAKGGMDHMTQSLA AWG  NIQVN +LPGLV +EMMPC GPNK   ++DY+ +KSP  RYG+P+DF+ +SI L+S ASSF+TG+++VADGGLS+S++
Sbjct:    1 MNFFDLSGKVAIITGGNGGLGLGIAKGLASEGCAVALVGRNQEKIDKAVAEMEAIGARAIGVQADVSQEDDVNRMVKETAEKLGRVDILFNNAAISWGIPPEKMTLEEWDKFIAIDLTSCFLCAKACYPEMVKAGGGKIINVGSAITNNKGFGKLVHYAAAKGGMDHMTQSLARAWGKDNIQVNALLPGLVHTEMMPCFGPNKIGPVVDYIEKKSPAGRYGMPEDFEGISIFLSSEASSFMTGSIVVADGGLSISVL 257          
BLAST of mRNA_P-wetherbeei_contig5857.2.1 vs. uniprot
Match: A0A496XBR5_9GAMM (2-deoxy-D-gluconate 3-dehydrogenase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496XBR5_9GAMM)

HSP 1 Score: 351 bits (901), Expect = 6.980e-120
Identity = 169/256 (66.02%), Postives = 216/256 (84.38%), Query Frame = 1
Query:    4 LDLFDLTGKVAIVTGGNGGLGLGIARGLARAGAAVAIVGRNQEKLDKAYENLKGIGPKILRVRADVSVEDDVHRMVKETVAALGRVDILFNNAAVSYGHSAERISLEEWNRFLAINLTSVMLCSQACYPEFIKVGGGKIINIGSIITQHMGHPKLIAYAAAKGGMDHMTQSLAVAWGPQNIQVNCVLPGLVDSEMMPCEGPNKQSKIIDYVVEKSPVRRYGIPDDFQALSILLASPASSFITGALIVADGGLSLSM 771
            +D FDL+GKVAI+TGGNGGLGLGIA+GLA+ G AV++VGRNQ+K+DKA   ++ +G K + V+ DVS EDDV+RMV+ET   LGRVDILFNNAA+S+G + E+++LEEW++F+AI+LTS  LCS+ACYPE +K GGGKI+N+GS IT+  G  KL+ YAAAKGGMDHMTQSLA AWG  NIQVN VLPGLV +EMMPC GP+K   ++DY V+KSPV RYG+PDDF+ +S+LL+S ASSFITG++IVADGGL+L++
Sbjct:    1 MDFFDLSGKVAIITGGNGGLGLGIAKGLAKEGCAVSLVGRNQDKIDKAVAEMEALGAKAIGVQCDVSKEDDVNRMVEETAKQLGRVDILFNNAAISWGIAPEKMTLEEWDKFIAIDLTSCFLCSKACYPEMVKAGGGKIVNVGSAITKK-GFGKLVHYAAAKGGMDHMTQSLARAWGKDNIQVNAVLPGLVHTEMMPCFGPDKIGPLVDYAVKKSPVNRYGMPDDFEGISVLLSSEASSFITGSIIVADGGLTLAI 255          
BLAST of mRNA_P-wetherbeei_contig5857.2.1 vs. uniprot
Match: A0A496XC51_9GAMM (2-deoxy-D-gluconate 3-dehydrogenase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A496XC51_9GAMM)

HSP 1 Score: 349 bits (895), Expect = 5.710e-119
Identity = 175/256 (68.36%), Postives = 211/256 (82.42%), Query Frame = 1
Query:    4 LDLFDLTGKVAIVTGGNGGLGLGIARGLARAGAAVAIVGRNQEKLDKAYENLKGIGPKILRVRADVSVEDDVHRMVKETVAALGRVDILFNNAAVSYGHSAERISLEEWNRFLAINLTSVMLCSQACYPEFIKVGGGKIINIGSIITQHMGHPKLIAYAAAKGGMDHMTQSLAVAWGPQNIQVNCVLPGLVDSEMMPCEGPNKQSKIIDYVVEKSPVRRYGIPDDFQALSILLASPASSFITGALIVADGGLSLSM 771
            + +FDLTGKVAI+TGGNGGLGLGIARGLA AGAAVAIVGRN++KL  A ++L+G G  +L ++ADVS+EDDV+RMV ETV   GR+DILFNNAA+S+G   E ++LEEWN FLAI+LTS  L S+ACYPEF+K GGGKIINI SI+T+ +GHPKL+ YAAAKGGMDHMTQSLA +WGPQNIQVN VLPGLVDSEMMP      +S +IDY + KS   R+G PDDF  +SILL+S AS FITG++IV DGGLSL++
Sbjct:    1 MKIFDLTGKVAIITGGNGGLGLGIARGLAAAGAAVAIVGRNEDKLKTAVQDLEGGGATVLPIQADVSLEDDVNRMVAETVERFGRIDILFNNAAISWGIRPEEMTLEEWNMFLAIDLTSCFLTSKACYPEFVKAGGGKIINISSIVTK-LGHPKLVQYAAAKGGMDHMTQSLARSWGPQNIQVNAVLPGLVDSEMMPVGPEGTRSPLIDYAISKSACERHGTPDDFAGISILLSSAASDFITGSIIVVDGGLSLAI 255          
BLAST of mRNA_P-wetherbeei_contig5857.2.1 vs. uniprot
Match: A0A496XC68_9GAMM (2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496XC68_9GAMM)

HSP 1 Score: 343 bits (880), Expect = 1.060e-116
Identity = 168/256 (65.62%), Postives = 210/256 (82.03%), Query Frame = 1
Query:    4 LDLFDLTGKVAIVTGGNGGLGLGIARGLARAGAAVAIVGRNQEKLDKAYENLKGIGPKILRVRADVSVEDDVHRMVKETVAALGRVDILFNNAAVSYGHSAERISLEEWNRFLAINLTSVMLCSQACYPEFIKVGGGKIINIGSIITQHMGHPKLIAYAAAKGGMDHMTQSLAVAWGPQNIQVNCVLPGLVDSEMMPCEGPNKQSKIIDYVVEKSPVRRYGIPDDFQALSILLASPASSFITGALIVADGGLSLSM 771
            +  FDLTGKVAI+TGGNGGLGLGIA+GLA+ G AVA+VGRNQ+K+D A   +  +G K + V+ADVSVEDDV+RMVKETV  LGRVDILFNNAA+S+G + E+++L EW+ F+A++LTS  LCS+ACYPE +K GGGKI+NIGS IT+  G  KL+ YAAAKGGMDHMTQSLA AWG  NIQ+N VLPGLV +EMMPCEGP K   + DY+V+K+PV RY +PDDF+ +S+LL+S ASSFITG++IV DGG+ L +
Sbjct:    1 MKFFDLTGKVAIITGGNGGLGLGIAKGLAKEGCAVALVGRNQDKIDNAVAEMAALGAKAIGVQADVSVEDDVNRMVKETVEQLGRVDILFNNAAISWGIAPEKMTLAEWDNFIAVDLTSCFLCSKACYPEMVKAGGGKIVNIGSAITKK-GMGKLVHYAAAKGGMDHMTQSLARAWGKDNIQINAVLPGLVHTEMMPCEGPKKAGPV-DYIVKKTPVGRYAMPDDFEGISVLLSSEASSFITGSIIVVDGGMMLGI 254          
BLAST of mRNA_P-wetherbeei_contig5857.2.1 vs. uniprot
Match: A0A1Y5FZQ2_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Y5FZQ2_9GAMM)

HSP 1 Score: 342 bits (876), Expect = 4.440e-116
Identity = 172/256 (67.19%), Postives = 208/256 (81.25%), Query Frame = 1
Query:    4 LDLFDLTGKVAIVTGGNGGLGLGIARGLARAGAAVAIVGRNQEKLDKAYENLKGIGPKILRVRADVSVEDDVHRMVKETVAALGRVDILFNNAAVSYGHSAERISLEEWNRFLAINLTSVMLCSQACYPEFIKVGGGKIINIGSIITQHMGHPKLIAYAAAKGGMDHMTQSLAVAWGPQNIQVNCVLPGLVDSEMMPCEGPNKQSKIIDYVVEKSPVRRYGIPDDFQALSILLASPASSFITGALIVADGGLSLSM 771
            +D+FDL+GKVAI+TGGNGGLGLGIAR LA+AGA+VAIVGRN +KL  A  NL+  G  +L V+ADVS+EDDV+RMV ETV   GR+DILFNNAA+SYG   E ++LE WN+F+AI+LTS  LC +A +PE +K GGGKIIN+GSIIT+ +GHPKL  YAAAKGGMDHMTQSLA AWG  NIQVN VLPGLVDSEMMP       + IIDYV+EKS V+R+G PDDF  +SI+L+S AS FITG++IV DGGLSL++
Sbjct:    1 MDIFDLSGKVAIITGGNGGLGLGIARALAKAGASVAIVGRNTDKLKAATANLESGGATVLAVQADVSLEDDVNRMVAETVERFGRIDILFNNAAISYGVRPELMTLEVWNKFIAIDLTSCFLCCKAVHPEMVKAGGGKIINVGSIITK-LGHPKLAQYAAAKGGMDHMTQSLACAWGENNIQVNAVLPGLVDSEMMPVSDSGDHAPIIDYVIEKSAVKRHGTPDDFAGISIMLSSAASDFITGSIIVVDGGLSLAI 255          
BLAST of mRNA_P-wetherbeei_contig5857.2.1 vs. uniprot
Match: A0A1Y5FZT0_9GAMM (Uncharacterized protein n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Y5FZT0_9GAMM)

HSP 1 Score: 338 bits (868), Expect = 7.310e-115
Identity = 165/253 (65.22%), Postives = 208/253 (82.21%), Query Frame = 1
Query:   13 FDLTGKVAIVTGGNGGLGLGIARGLARAGAAVAIVGRNQEKLDKAYENLKGIGPKILRVRADVSVEDDVHRMVKETVAALGRVDILFNNAAVSYGHSAERISLEEWNRFLAINLTSVMLCSQACYPEFIKVGGGKIINIGSIITQHMGHPKLIAYAAAKGGMDHMTQSLAVAWGPQNIQVNCVLPGLVDSEMMPCEGPNKQSKIIDYVVEKSPVRRYGIPDDFQALSILLASPASSFITGALIVADGGLSLSM 771
            FDLTGKVAI+TGGNGGLGLGIA+GLA  G AVA+VGRNQ+K+DKA   ++ +G K + V+ADVS E DV RMV ET   LGRVDILFNNAA+S+G   E++++EEW++F+AI+LTS  LC++ CYPE +KVGGGKI+N+GS ITQ  G  KL+ YAAAKGGMDHMTQSLA+AWG  NIQVN +LPGLV +EMMPC G NK   ++DY+ +K+PV RYG+PDDF+ LSI+L+S AS FITG++IVADGG++L +
Sbjct:    4 FDLTGKVAIITGGNGGLGLGIAKGLASEGCAVALVGRNQDKIDKAVAEMEALGAKAIGVQADVSKEADVIRMVAETAEQLGRVDILFNNAAISWGIPPEKMTIEEWDQFIAIDLTSCFLCAKHCYPEMVKVGGGKIVNVGSAITQK-GMGKLVHYAAAKGGMDHMTQSLALAWGKDNIQVNAILPGLVHTEMMPCFGENKIGPVVDYITKKTPVGRYGMPDDFEGLSIVLSSEASKFITGSIIVADGGMTLGI 255          
BLAST of mRNA_P-wetherbeei_contig5857.2.1 vs. uniprot
Match: A0A1Y5FMW3_9GAMM (Uncharacterized protein n=2 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A1Y5FMW3_9GAMM)

HSP 1 Score: 329 bits (844), Expect = 3.260e-111
Identity = 165/254 (64.96%), Postives = 209/254 (82.28%), Query Frame = 1
Query:   13 FDLTGKVAIVTGGNGGLGLGIARGLARAGAAVAIVGRNQEKLDKAYENLKGIGPKILRVRADVSVEDDVHRMVKETVAALGRVDILFNNAAVSYGHSAERISLEEWNRFLAINLTSVMLCSQACYPEFIKVGGGKIINIGSIITQH-MGHPKLIAYAAAKGGMDHMTQSLAVAWGPQNIQVNCVLPGLVDSEMMPCEGPNKQSKIIDYVVEKSPVRRYGIPDDFQALSILLASPASSFITGALIVADGGLSLSM 771
            FDLTGKVAI+TGGNGGLGLGIA+GLA  G AVA+VGRNQ+K+DKA   +  +G K + V+ADVS E DV+RMV ETV  LGRVDILFNNAA+S+G + E++S+E+W++F+AI+LTS  LCS+A YPE +K GGGKIIN+GS I++  MG  KL+ YAAAKGGMD MTQSLA+AWG  NIQVN +LPGLV +EMMPC G NK   ++DY+ +K+PV R+G+PDDF+ LSILL+S AS FITG++IVADGG++L +
Sbjct:    4 FDLTGKVAIITGGNGGLGLGIAKGLASEGCAVALVGRNQDKIDKAVAVMTELGAKAIGVQADVSKEADVNRMVAETVEQLGRVDILFNNAAISWGVAPEKLSIEDWDQFIAIDLTSGFLCSKAVYPEMVKAGGGKIINVGSAISEKAMG--KLVHYAAAKGGMDKMTQSLALAWGKDNIQVNAILPGLVHTEMMPCFGENKIGPVVDYITKKTPVGRHGMPDDFEGLSILLSSDASKFITGSIIVADGGMTLGI 255          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5857.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TVQ0_9PROT3.790e-15083.922-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Alphap... [more]
A0A3C0TV03_9PROT2.460e-14880.392-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Alphap... [more]
A0A352Q6F9_9GAMM6.330e-12372.272-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Portic... [more]
A0A3B9ABX6_9GAMM3.720e-12065.372-deoxy-D-gluconate 3-dehydrogenase n=2 Tax=Portic... [more]
A0A496XBR5_9GAMM6.980e-12066.022-deoxy-D-gluconate 3-dehydrogenase n=2 Tax=Gammap... [more]
A0A496XC51_9GAMM5.710e-11968.362-deoxy-D-gluconate 3-dehydrogenase n=2 Tax=Gammap... [more]
A0A496XC68_9GAMM1.060e-11665.632-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Gammap... [more]
A0A1Y5FZQ2_9GAMM4.440e-11667.19Uncharacterized protein n=2 Tax=Gammaproteobacteri... [more]
A0A1Y5FZT0_9GAMM7.310e-11565.22Uncharacterized protein n=4 Tax=Gammaproteobacteri... [more]
A0A1Y5FMW3_9GAMM3.260e-11164.96Uncharacterized protein n=2 Tax=unclassified Gamma... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5857contigP-wetherbeei_contig5857:1554..2330 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1245469.S58_37100
Preferred nameMA20_30645
PFAMsadh_short_C2
Model size777
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00089
KEGG koko:K00065
KEGG ReactionR01542
KEGG Pathwayko00040,map00040
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.45e-71
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,1MWB6@1224|Proteobacteria,2TUKJ@28211|Alphaproteobacteria,3JUMA@41294|Bradyrhizobiaceae
EC1.1.1.127
DescriptionKR domain
Cds size777
COG categoryIQ
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186866.9592023-CDS-P-wetherbeei_contig5857:1553..23301683186866.9592023-CDS-P-wetherbeei_contig5857:1553..2330Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5857 1554..2330 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5857.2.1prot_P-wetherbeei_contig5857.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5857 1554..2330 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5857.2.1

>prot_P-wetherbeei_contig5857.2.1 ID=prot_P-wetherbeei_contig5857.2.1|Name=mRNA_P-wetherbeei_contig5857.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=259bp
VLDLFDLTGKVAIVTGGNGGLGLGIARGLARAGAAVAIVGRNQEKLDKAY
ENLKGIGPKILRVRADVSVEDDVHRMVKETVAALGRVDILFNNAAVSYGH
SAERISLEEWNRFLAINLTSVMLCSQACYPEFIKVGGGKIINIGSIITQH
MGHPKLIAYAAAKGGMDHMTQSLAVAWGPQNIQVNCVLPGLVDSEMMPCE
GPNKQSKIIDYVVEKSPVRRYGIPDDFQALSILLASPASSFITGALIVAD
GGLSLSMM*
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mRNA from alignment at P-wetherbeei_contig5857:1554..2330+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5857.2.1 ID=mRNA_P-wetherbeei_contig5857.2.1|Name=mRNA_P-wetherbeei_contig5857.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=777bp|location=Sequence derived from alignment at P-wetherbeei_contig5857:1554..2330+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCTGGACTTATTTGATCTCACAGGAAAAGTGGCCATCGTTACCGGGGG TAATGGCGGTTTGGGGCTTGGCATTGCGCGTGGACTGGCGCGGGCCGGGG CGGCTGTCGCCATTGTCGGGCGCAATCAGGAAAAGCTGGATAAGGCGTAC GAAAACCTGAAGGGCATCGGCCCCAAAATTCTCCGGGTGCGGGCGGATGT TTCCGTCGAAGACGATGTGCATCGCATGGTCAAGGAAACCGTCGCGGCGC TGGGGCGGGTGGATATCCTGTTCAACAATGCCGCCGTCAGCTATGGACAT AGCGCCGAGCGCATATCCCTGGAAGAATGGAACAGGTTTCTTGCAATAAA TCTCACCTCGGTGATGCTCTGCTCGCAGGCCTGCTATCCCGAATTTATCA AGGTTGGCGGCGGTAAGATCATCAATATCGGCTCCATTATCACCCAGCAT ATGGGGCATCCTAAACTGATCGCCTATGCGGCTGCCAAAGGCGGCATGGA TCACATGACCCAAAGCCTTGCCGTTGCCTGGGGGCCGCAGAATATCCAGG TGAACTGCGTTCTGCCCGGACTGGTAGATAGTGAAATGATGCCTTGCGAA GGCCCAAACAAACAGTCCAAAATCATCGACTATGTGGTGGAGAAATCCCC GGTTCGCCGCTATGGCATCCCGGATGATTTTCAGGCGCTGTCCATCCTGC TGGCCAGCCCGGCGTCCAGCTTTATCACCGGCGCGCTGATTGTTGCGGAT GGCGGCCTGTCGCTGTCTATGATGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5857:1554..2330+

>mRNA_P-wetherbeei_contig5857.2.1 ID=mRNA_P-wetherbeei_contig5857.2.1|Name=mRNA_P-wetherbeei_contig5857.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=777bp|location=Sequence derived from alignment at P-wetherbeei_contig5857:1554..2330+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCTGGACTTATTTGATCTCACAGGAAAAGTGGCCATCGTTACCGGGGG
TAATGGCGGTTTGGGGCTTGGCATTGCGCGTGGACTGGCGCGGGCCGGGG
CGGCTGTCGCCATTGTCGGGCGCAATCAGGAAAAGCTGGATAAGGCGTAC
GAAAACCTGAAGGGCATCGGCCCCAAAATTCTCCGGGTGCGGGCGGATGT
TTCCGTCGAAGACGATGTGCATCGCATGGTCAAGGAAACCGTCGCGGCGC
TGGGGCGGGTGGATATCCTGTTCAACAATGCCGCCGTCAGCTATGGACAT
AGCGCCGAGCGCATATCCCTGGAAGAATGGAACAGGTTTCTTGCAATAAA
TCTCACCTCGGTGATGCTCTGCTCGCAGGCCTGCTATCCCGAATTTATCA
AGGTTGGCGGCGGTAAGATCATCAATATCGGCTCCATTATCACCCAGCAT
ATGGGGCATCCTAAACTGATCGCCTATGCGGCTGCCAAAGGCGGCATGGA
TCACATGACCCAAAGCCTTGCCGTTGCCTGGGGGCCGCAGAATATCCAGG
TGAACTGCGTTCTGCCCGGACTGGTAGATAGTGAAATGATGCCTTGCGAA
GGCCCAAACAAACAGTCCAAAATCATCGACTATGTGGTGGAGAAATCCCC
GGTTCGCCGCTATGGCATCCCGGATGATTTTCAGGCGCTGTCCATCCTGC
TGGCCAGCCCGGCGTCCAGCTTTATCACCGGCGCGCTGATTGTTGCGGAT
GGCGGCCTGTCGCTGTCTATGATGTAA
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