mRNA_P-wetherbeei_contig5856.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A6H5JSS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSS2_9PHAE) HSP 1 Score: 246 bits (629), Expect = 3.150e-74 Identity = 130/244 (53.28%), Postives = 161/244 (65.98%), Query Frame = 1
Query: 91 SGFDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAARRRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAALGGASD 822
SGFDSMN++VA LLTDLTA RFAGDLNVDLNEI TN+VPFPR+HYL++ +SPLP A+ ++PP G RR MA +F A S L+ ADPR +++LACGLL+RG+V SD +A +ERL AELDMV WN EG+KIG+C VPP+G +SLLCL+NNCC+ F + RF +LY R AMLHHYT+F+E FDEA ESL + ADYA L AS+
Sbjct: 238 SGFDSMNSLVARLLTDLTASMRFAGDLNVDLNEITTNLVPFPRLHYLLSSVSPLPTRSSAEVFDGR--------------------TIPPAAAGFDGRPRR-MAQMFSGAFSASNMLMRADPRKSKFLACGLLVRGEVVVSDVNANIERLAAELDMVHWNPEGYKIGLCSVPPVGTTQSLLCLSNNCCIMDTFADLRRRFIQLYHREAMLHHYTEFMERGGFDEALESLESLIADYAELDKASE 460
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A835YXS9_9STRA (Tubulin/FtsZ family, GTPase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXS9_9STRA) HSP 1 Score: 244 bits (622), Expect = 4.960e-73 Identity = 130/240 (54.17%), Postives = 155/240 (64.58%), Query Frame = 1
Query: 88 GSGFDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAARRRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAAL 807
G GFD MN+IVA L+ D+TA ARF G LNVDLNEI TN+VPFPRMHYLV+ +SPL R SLP P P R M L DALS RQL+ DP +R+LAC LLLRGDV S+A+ VE+LR LDMV WNREGFK+G+C VPP G RSLLCL+NNCCVA F+ + ++F +LY RRAM+HHYTQFV+ +VFDEA ES+ + ADY L
Sbjct: 255 GPGFDGMNSIVASLMADVTASARFPGSLNVDLNEIATNLVPFPRMHYLVSALSPL-------------------RVPPPPQQMARRASLP-APERGP---RGTMPRLIADALSPTRQLMRCDPARSRFLACSLLLRGDVTVSEANVGVEKLRGSLDMVHWNREGFKVGLCNVPPPGLQRSLLCLSNNCCVAQSFEDLRQQFCKLYTRRAMVHHYTQFVDQSVFDEALESVTALIADYEEL 471
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: H3G7Q3_PHYRM (Tubulin_C domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7Q3_PHYRM) HSP 1 Score: 204 bits (519), Expect = 3.410e-60 Identity = 107/244 (43.85%), Postives = 153/244 (62.70%), Query Frame = 1
Query: 91 SGFDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAARRRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAALGGASD 822
S F MN IVA LLT+LT+ RF G LNVDLNEI TN+VPFP++H+L++ +SP+ +D PR+ P RR+ +F DA + QL+ A+PR + YLACGLL+RG+VE SD +A ++RL++E+ M+ WN+EGFK+GVC VPP+G+ SLLCL+NNCC+ F+ + RF +LY R+A +HHYT+F++ + D A E+ + +YA L +SD
Sbjct: 62 SAFGEMNNIVARLLTNLTSSMRFEGSLNVDLNEITTNLVPFPKLHFLLSSMSPV--FATSD------------------------------PRQQP----RRLNQMFSDAFQKDHQLIRANPRASVYLACGLLMRGNVEVSDINANIQRLQSEVRMIHWNQEGFKVGVCSVPPVGQKSSLLCLSNNCCIRETFERLNARFHKLYSRKAHMHHYTEFMDAGMLDMAQENTRYLIGEYAKLERSSD 269
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A6A3XDD2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XDD2_9STRA) HSP 1 Score: 211 bits (537), Expect = 3.500e-60 Identity = 111/247 (44.94%), Postives = 156/247 (63.16%), Query Frame = 1
Query: 85 RGSGFDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAARRRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAALGGASDA 825
+ S F MN IVA LLT+LT+ RF G LNVDLNEI TN+VPFP++H+L++ +SP+ AD PR+ P RR+ +F +A + QL+ A+PR + YLACGLL+RG+VE SD +A ++RL++E+ M+ WN+EGFK+GVC VPP+G SLLCL+NNCC+ F+ + RF +LY R+A +HHYT+F++ + DEA E+ + +YA L GASDA
Sbjct: 289 KASAFGEMNNIVARLLTNLTSSMRFEGSLNVDLNEITTNLVPFPKLHFLLSSMSPV--FATAD------------------------------PRQQP----RRLNQMFSEAFQQDHQLIRANPRASVYLACGLLMRGNVEVSDINANIQRLQSEVRMIHWNQEGFKVGVCSVPPVGHKSSLLCLSNNCCIRETFERLHTRFHKLYSRKAHMHHYTEFMDVGMLDEAQENARYLIGEYAKLEGASDA 499
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A061QL12_9CHLO (Tubulin epsilon chain (Fragment) n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QL12_9CHLO) HSP 1 Score: 203 bits (516), Expect = 5.730e-59 Identity = 108/240 (45.00%), Postives = 137/240 (57.08%), Query Frame = 1
Query: 97 FDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAAR---RRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAAL 807
FD+MN I A LL +T+ RF G LNVDLNEI N+VP+PRMH+L+ +SP PR+ G AR R + F SR QLL A+PR + YLACG+L RGDV SD + R++ L MVPWN EGFKIG+CGVPP P S+ CL+NNCCV G F M ERF +LY+R+ +HHYT+++E AVFD+A E + + DYA L
Sbjct: 116 FDAMNGIAANLLLGVTSSVRFEGSLNVDLNEITNNLVPYPRMHFLLPSMSPFAT-----------------------------------PRDV-GMARAGSRALETSFSQCFSREHQLLRAEPRRSTYLACGMLFRGDVTMSDVQRNMARIKPSLRMVPWNTEGFKIGLCGVPPADAPLSVTCLSNNCCVRGTFTSMQERFMKLYKRKVYVHHYTRYMEAAVFDQALEDVHSLIEDYAGL 319
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A0P1A9E1_PLAHL (Tubulin family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9E1_PLAHL) HSP 1 Score: 208 bits (529), Expect = 5.810e-59 Identity = 107/245 (43.67%), Postives = 153/245 (62.45%), Query Frame = 1
Query: 91 SGFDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAARRRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAALGGASDA 825
S F+ MN +VA LLT+LT+ RF G LNVDLN+I TN+VPFP++H+L+A +SP D PR+ P RR+ +F DA + QL+ A+PR + YLACGL +RG VE SD +A ++RL++EL M+ WN+EGFK+G+C VPP+G+ SLLCL+NNCC+ F + RF +LY RRA +HHYT++++ A DEA E+++ + +Y+ L AS+A
Sbjct: 296 SAFEEMNNVVARLLTNLTSSMRFPGSLNVDLNDITTNLVPFPKLHFLLASMSPAFDTSD--------------------------------PRQQP----RRLFQMFSDAFQKDHQLIRANPRASVYLACGLFMRGGVEISDINANIQRLQSELRMIHWNQEGFKVGICRVPPVGQKSSLLCLSNNCCIRETFQRLNTRFQKLYSRRAHVHHYTEYMDIAKLDEAQENVMYLIGEYSKLEHASEA 504
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A5D6XJK8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJK8_9STRA) HSP 1 Score: 208 bits (529), Expect = 1.150e-58 Identity = 110/239 (46.03%), Postives = 151/239 (63.18%), Query Frame = 1
Query: 91 SGFDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAARRRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAAL 807
S F MN IVA LLT+LT+ RF G LNVDLNEI TN+VPFP++H+L++ +SPL AD PR P RR+A +F DA + QL+ A+PR + YLACGLLLRG+VE SD +A ++RL++ + M+ WN+EGFK+G+C VPP+G+ +SLLCL+NNCC+ F+ + RF +LY R+A +HHY +F+E A F EA ES+ + +YA L
Sbjct: 328 SAFGEMNNIVARLLTNLTSSVRFEGSLNVDLNEITTNLVPFPKLHFLLSSMSPLVST--AD------------------------------PRHQP----RRLAQMFTDAFHKDHQLIRANPRASVYLACGLLLRGNVEVSDVNANIQRLQSGVRMIHWNQEGFKVGMCSVPPIGQRQSLLCLSNNCCIRETFERLQRRFQKLYARKAHVHHYAEFMESARFGEALESVRYLVEEYAKL 530
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A7S1X922_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X922_9CHLO) HSP 1 Score: 202 bits (514), Expect = 5.320e-58 Identity = 105/239 (43.93%), Postives = 136/239 (56.90%), Query Frame = 1
Query: 97 FDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAAR--RRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAAL 807
FD+MN + A LL +T+ RF G LNVDLNEI N+VP+P+MH+L+ +SP PR+ A R + SR QLL ADPR++ YLACG+L RG V SD + R++ L MVPWN EGFKIG+C VPP+ P SL CL+NNCCV F M ERF +LY+R+ +HHYTQF+E A+FDEAY+S+ ++ DYA L
Sbjct: 172 FDAMNGVAASLLLGVTSSVRFEGSLNVDLNEITNNLVPYPKMHFLIPSLSPYAT-----------------------------------PRDVAFATAGPRALETTCSQVFSREHQLLRADPRNSTYLACGMLFRGAVTISDVQRNLARIKPTLRMVPWNPEGFKIGLCSVPPVNSPLSLTCLSNNCCVRSTFSNMQERFQKLYKRKVYVHHYTQFMEEAIFDEAYQSVEQLVCDYANL 375
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A225WH07_9STRA (Tubulin/FtsZ family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WH07_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.160e-57 Identity = 109/243 (44.86%), Postives = 152/243 (62.55%), Query Frame = 1
Query: 91 SGFDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAARRRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAALGGAS 819
S F+ MN IVA LLT+LT+ RF G LNVDLNEI TN+VPFPR+H+L++ +SPL GA PR+ P RR+ +F DA + QL+ A+PR + YLACGLL+RG+VE SD + ++RL++E+ M+ WN+EGFK+GVC VPP+G+ SLLCL+NN C+ F+ + RF +LY R+A +HHYT+F++ + DEA E+ + +YA L AS
Sbjct: 264 SAFEEMNNIVARLLTNLTSSMRFEGSLNVDLNEITTNLVPFPRLHFLLSSMSPL----GATSD----------------------------PRQQP----RRLNQIFADAFHKDYQLIRANPRASVYLACGLLMRGNVEVSDINVNIQRLQSEVRMIHWNQEGFKVGVCSVPPVGQKSSLLCLSNNSCIRETFERLNTRFHKLYSRKAHMHHYTEFMDAGMLDEAQENARYLIGEYAKLERAS 470
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Match: A0A061RE11_9CHLO (Tubulin epsilon n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RE11_9CHLO) HSP 1 Score: 203 bits (516), Expect = 1.640e-57 Identity = 108/240 (45.00%), Postives = 137/240 (57.08%), Query Frame = 1
Query: 97 FDSMNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPDEGGADGXXXXXXXXXXXXXXXXXXXXXXRGSLPPLPREAPGAAR---RRMAHLFGDALSRRRQLLSADPRHARYLACGLLLRGDVEASDAHAAVERLRAELDMVPWNREGFKIGVCGVPPLGRPRSLLCLANNCCVAGRFDGMAERFARLYRRRAMLHHYTQFVEPAVFDEAYESLLRVAADYAAL 807
FD+MN I A LL +T+ RF G LNVDLNEI N+VP+PRMH+L+ +SP PR+ G AR R + F SR QLL A+PR + YLACG+L RGDV SD + R++ L MVPWN EGFKIG+CGVPP P S+ CL+NNCCV G F M ERF +LY+R+ +HHYT+++E AVFD+A E + + DYA L
Sbjct: 249 FDAMNGIAANLLLGVTSSVRFEGSLNVDLNEITNNLVPYPRMHFLLPSMSPFAT-----------------------------------PRDV-GMARAGSRALETSFSQCFSREHQLLRAEPRRSTYLACGMLFRGDVTMSDVQRNMARIKPSLRMVPWNTEGFKIGLCGVPPADAPLSVTCLSNNCCVRGTFTSMQERFMKLYKRKVYVHHYTRYMEAAVFDQALEDVHSLIEDYAGL 452 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5856.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5856.1.1 >prot_P-wetherbeei_contig5856.1.1 ID=prot_P-wetherbeei_contig5856.1.1|Name=mRNA_P-wetherbeei_contig5856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=277bp MNAIVAGLLTDLTAPARFAGDLNVDLNEICTNMVPFPRMHYLVAGISPLPback to top mRNA from alignment at P-wetherbeei_contig5856:2471..3562- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5856.1.1 ID=mRNA_P-wetherbeei_contig5856.1.1|Name=mRNA_P-wetherbeei_contig5856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1092bp|location=Sequence derived from alignment at P-wetherbeei_contig5856:2471..3562- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5856:2471..3562- >mRNA_P-wetherbeei_contig5856.1.1 ID=mRNA_P-wetherbeei_contig5856.1.1|Name=mRNA_P-wetherbeei_contig5856.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=831bp|location=Sequence derived from alignment at P-wetherbeei_contig5856:2471..3562- (Phaeothamnion wetherbeei SAG_119_79)back to top |