mRNA_P-wetherbeei_contig58526.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58526.1.1
Unique NamemRNA_P-wetherbeei_contig58526.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig58526.1.1 vs. uniprot
Match: A0A6C0F6V5_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F6V5_9ZZZZ)

HSP 1 Score: 58.5 bits (140), Expect = 8.490e-8
Identity = 31/74 (41.89%), Postives = 41/74 (55.41%), Query Frame = 1
Query:   13 GLRLSAGDLVLVKDQTVLEQNGIYTVVDTGDAATTWRIARTAQFDRSARMIAGSSTLVREGS-RAGSVWALNET 231
            G+ L   D VLVKDQT L QNGIY V   G +++ W + RT  FD +  M  G    V +G+   G+ W L +T
Sbjct: 3235 GIDLIVNDRVLVKDQTSLNQNGIYKVTTVGTSSSAWVLTRTDDFDENGEMSKGDFVFVTDGTLNGGNGWVLTQT 3308          
BLAST of mRNA_P-wetherbeei_contig58526.1.1 vs. uniprot
Match: A0A653KXA9_9GAMM (Phage tail protein n=1 Tax=Aeromonas veronii TaxID=654 RepID=A0A653KXA9_9GAMM)

HSP 1 Score: 54.7 bits (130), Expect = 1.680e-6
Identity = 38/88 (43.18%), Postives = 49/88 (55.68%), Query Frame = 1
Query:    7 INGLRLSAGDLVLVKDQTVLEQNGIYTVVDTGDAATTWRIARTAQFDRSARMIAGSSTLVREGS-RAGSVWAL-NETITAVGRDPVLF 264
            I+G+ LS GD +LVKDQ    QNGIY V     AAT W   R+A  D  +++ +G+   V EGS  AG VW L N     VG   ++F
Sbjct:   98 IDGVSLSIGDRILVKDQVTATQNGIYVV-----AATAW--PRSADADNGSKLTSGARIAVEEGSINAGKVWYLANAGAINVGSTNLIF 178          
BLAST of mRNA_P-wetherbeei_contig58526.1.1 vs. uniprot
Match: UPI001F390A61 (tail fiber domain-containing protein n=1 Tax=Aeromonas salmonicida TaxID=645 RepID=UPI001F390A61)

HSP 1 Score: 54.7 bits (130), Expect = 1.900e-6
Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = 1
Query:    1 LVINGLRLSAGDLVLVKDQTVLEQNGIYTVVDTGDAATTWRIARTAQFDRSARMIAGSSTLVREGSRAGSVWALNE 228
            LVI+G+ ++ G  VLVK+QT   QNGIYT+   G +   W + R A  D SA++ AG+   V +G+  GS+   N+
Sbjct: 2216 LVIDGVTVTVGMRVLVKNQTAAAQNGIYTLTTAGSSTVAWVLTRAADADTSAKL-AGAVVTVDQGAANGSLLLTND 2290          
BLAST of mRNA_P-wetherbeei_contig58526.1.1 vs. uniprot
Match: UPI00191D1D77 (hypothetical protein n=1 Tax=Aeromonas veronii TaxID=654 RepID=UPI00191D1D77)

HSP 1 Score: 53.9 bits (128), Expect = 2.940e-6
Identity = 37/89 (41.57%), Postives = 49/89 (55.06%), Query Frame = 1
Query:    7 INGLRLSAGDLVLVKDQTVLEQNGIYTVVDTGDAATTWRIARTAQFDRSARMIAGSSTLVREGS-RAGSVWALNET-ITAVGRDPVLFS 267
            I+G+ L+ GD VLVKDQT   QNGIY V     AA +W   R    D   ++ +G+   V EG+  AG VW L    + AVG   +LF+
Sbjct:   97 IDGVTLTVGDRVLVKDQTTAAQNGIYLV-----AAQSW--TRATDADNGTKLSSGARVAVEEGAVNAGKVWYLATAGVIAVGSTALLFT 178          
BLAST of mRNA_P-wetherbeei_contig58526.1.1 vs. uniprot
Match: UPI001CCABE76 (hypothetical protein n=1 Tax=Mesorhizobium sp. CO1-1-2 TaxID=2876635 RepID=UPI001CCABE76)

HSP 1 Score: 53.5 bits (127), Expect = 4.580e-6
Identity = 33/91 (36.26%), Postives = 50/91 (54.95%), Query Frame = 1
Query:    1 LVINGLRLSAGDLVLVKDQTVLEQNGIYTVVDTGDAATTWRIARTAQFDRSARMIAGSSTLVREGSRAGSV-WALNETITAV-GRDPVLFS 267
            L I+ + +SAGD++LVK+Q    QNGIY V  TG A   + + R   ++ +A +  G  T +  G+  G+  WA N T   V G  P+ F+
Sbjct:  304 LTIDSVAVSAGDVILVKNQASTFQNGIYNVTATGSAGAPFVLTRATYYNLAADIDLGDQTFITGGATFGATTWAQNGTENPVIGTSPITFA 394          
BLAST of mRNA_P-wetherbeei_contig58526.1.1 vs. uniprot
Match: A0A126SXG8_9BACT (Uncharacterized protein n=1 Tax=uncultured bacterium UPO35 TaxID=1776962 RepID=A0A126SXG8_9BACT)

HSP 1 Score: 52.8 bits (125), Expect = 8.800e-6
Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 1
Query:    7 INGLRLSAGDLVLVKDQTVLEQNGIYTVVDTGDAATTWR---IARTAQFDRSARM-IAGSSTLVREGSRAGSVWALNETITAVGRDPV 258
            I+G+RL +GD VLVKDQ+V   NG+Y           WR   IA T   D    + +AG    V++G++A S+W   ET + +G DP+
Sbjct:  780 IDGIRLFSGDRVLVKDQSVARDNGVYV----------WRGPLIAMTRATDADTAVELAGLLIEVQQGTQARSIWRQKETNSTLGADPL 857          
BLAST of mRNA_P-wetherbeei_contig58526.1.1 vs. uniprot
Match: UPI001119D47C (hypothetical protein n=1 Tax=Aeromonas veronii TaxID=654 RepID=UPI001119D47C)

HSP 1 Score: 52.4 bits (124), Expect = 1.020e-5
Identity = 37/89 (41.57%), Postives = 48/89 (53.93%), Query Frame = 1
Query:    7 INGLRLSAGDLVLVKDQTVLEQNGIYTVVDTGDAATTWRIARTAQFDRSARMIAGSSTLVREGS-RAGSVWALNET-ITAVGRDPVLFS 267
            I+G+ L+ GD VLVKDQT   QNGIY V     AA +W   R    D   ++ +G+   V EG+  AG VW L      AVG   +LF+
Sbjct:   97 IDGVTLTVGDRVLVKDQTTAAQNGIYLV-----AAQSW--TRATDADNGTKLSSGARVAVEEGAVNAGKVWYLATAGAIAVGTTALLFA 178          
BLAST of mRNA_P-wetherbeei_contig58526.1.1 vs. uniprot
Match: A0A832HPH5_9BACT (Isopeptide-forming domain-containing fimbrial protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A832HPH5_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 1.240e-5
Identity = 41/96 (42.71%), Postives = 50/96 (52.08%), Query Frame = 1
Query:   22 LSAGDLVLVKDQTVLEQNGIYTVVD--TGDAATTWRIARTAQFDRSARMIAGSSTLVREGS-RAGSVWALNETITAVGRDPVLFSMVYQDNRDPLI 300
            L+  DLVLVKDQT  EQNGIY VV   TGD    W   R   FD +  M+ G    V  G+  AG V+ L  T+  V  DPV ++  Y D   P +
Sbjct: 2491 LADNDLVLVKDQTAPEQNGIYLVVHAATGD----WE--RWTDFDENTEMLTGYHVHVAGGNTHAGQVFELISTVNNVNTDPVNWAY-YADVTAPTV 2579          
BLAST of mRNA_P-wetherbeei_contig58526.1.1 vs. uniprot
Match: A0A7K4MR55_9ARCH (Uncharacterized protein n=1 Tax=Marine Group I thaumarchaeote TaxID=2511932 RepID=A0A7K4MR55_9ARCH)

HSP 1 Score: 51.6 bits (122), Expect = 2.160e-5
Identity = 25/64 (39.06%), Postives = 39/64 (60.94%), Query Frame = 1
Query:    7 INGLRLSAGDLVLVKDQTVLEQNGIYTVVDTGDAATTWRIARTAQFDRSARMIAGSSTLVREGS 198
            I+G+ L++G  VLVKDQ+   QNG+Y V   GD +T W + RT   D ++ + +G    V +G+
Sbjct:  369 IDGITLTSGQRVLVKDQSTASQNGLYKVSTVGDGSTNWILIRTTDADTASELSSGVFFFVEKGT 432          
BLAST of mRNA_P-wetherbeei_contig58526.1.1 vs. uniprot
Match: A0A329KMK8_9BACL (C1q domain-containing protein n=1 Tax=Paenibacillus sp. YN15 TaxID=1742774 RepID=A0A329KMK8_9BACL)

HSP 1 Score: 51.6 bits (122), Expect = 2.180e-5
Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 1
Query:    7 INGLRLSAGDLVLVKDQTVLEQNGIYTVVDTGDAATTWRIARTAQFDRSARMIAGSSTLVREGSRAG-SVWALNETITAV-GRDPVLF 264
            I+G+ L+AG+ VLVK+QT  ++NGIYTV     +A  W   RTA  D +A++ AG S  V EG+  G S W +  T   + G   +LF
Sbjct:   65 IDGIALAAGNRVLVKNQTAGKENGIYTV-----SAGAW--TRTADADTTAKLAAGVSVYVEEGTANGKSRWQMANTGAVILGTTALLF 145          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58526.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6C0F6V5_9ZZZZ8.490e-841.89Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A653KXA9_9GAMM1.680e-643.18Phage tail protein n=1 Tax=Aeromonas veronii TaxID... [more]
UPI001F390A611.900e-640.79tail fiber domain-containing protein n=1 Tax=Aerom... [more]
UPI00191D1D772.940e-641.57hypothetical protein n=1 Tax=Aeromonas veronii Tax... [more]
UPI001CCABE764.580e-636.26hypothetical protein n=1 Tax=Mesorhizobium sp. CO1... [more]
A0A126SXG8_9BACT8.800e-638.64Uncharacterized protein n=1 Tax=uncultured bacteri... [more]
UPI001119D47C1.020e-541.57hypothetical protein n=1 Tax=Aeromonas veronii Tax... [more]
A0A832HPH5_9BACT1.240e-542.71Isopeptide-forming domain-containing fimbrial prot... [more]
A0A7K4MR55_9ARCH2.160e-539.06Uncharacterized protein n=1 Tax=Marine Group I tha... [more]
A0A329KMK8_9BACL2.180e-542.05C1q domain-containing protein n=1 Tax=Paenibacillu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58526contigP-wetherbeei_contig58526:202..504 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog357808.RoseRS_1068
PFAMsDUF11,SdrD_B
Model size303
Max annot lvl32061|Chloroflexia
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.09e-06
EggNOG OGsCOG4932@1|root,COG4932@2|Bacteria,2GABV@200795|Chloroflexi,3752H@32061|Chloroflexia
DescriptionCna B domain protein
Cds size303
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186866.4748776-CDS-P-wetherbeei_contig58526:201..5041683186866.4748776-CDS-P-wetherbeei_contig58526:201..504Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58526 202..504 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58526.1.1prot_P-wetherbeei_contig58526.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58526 202..504 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58526.1.1

>prot_P-wetherbeei_contig58526.1.1 ID=prot_P-wetherbeei_contig58526.1.1|Name=mRNA_P-wetherbeei_contig58526.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=101bp
LVINGLRLSAGDLVLVKDQTVLEQNGIYTVVDTGDAATTWRIARTAQFDR
SARMIAGSSTLVREGSRAGSVWALNETITAVGRDPVLFSMVYQDNRDPLI
G
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mRNA from alignment at P-wetherbeei_contig58526:202..504-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58526.1.1 ID=mRNA_P-wetherbeei_contig58526.1.1|Name=mRNA_P-wetherbeei_contig58526.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig58526:202..504- (Phaeothamnion wetherbeei SAG_119_79)
TTGGTCATCAACGGACTGCGCCTTTCTGCTGGGGACCTAGTTCTGGTCAA AGACCAAACGGTGCTGGAGCAGAACGGGATTTACACGGTGGTCGATACTG GCGATGCGGCAACAACGTGGCGTATCGCTCGCACGGCTCAGTTCGATCGC TCTGCCCGGATGATCGCCGGCTCCAGCACGCTTGTCCGAGAAGGCTCGCG CGCCGGCTCGGTCTGGGCTCTCAACGAAACGATCACTGCGGTCGGCCGCG ATCCTGTGCTATTCTCAATGGTCTATCAGGATAATCGAGATCCGCTTATC GGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig58526:202..504-

>mRNA_P-wetherbeei_contig58526.1.1 ID=mRNA_P-wetherbeei_contig58526.1.1|Name=mRNA_P-wetherbeei_contig58526.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig58526:202..504- (Phaeothamnion wetherbeei SAG_119_79)
TTGGTCATCAACGGACTGCGCCTTTCTGCTGGGGACCTAGTTCTGGTCAA
AGACCAAACGGTGCTGGAGCAGAACGGGATTTACACGGTGGTCGATACTG
GCGATGCGGCAACAACGTGGCGTATCGCTCGCACGGCTCAGTTCGATCGC
TCTGCCCGGATGATCGCCGGCTCCAGCACGCTTGTCCGAGAAGGCTCGCG
CGCCGGCTCGGTCTGGGCTCTCAACGAAACGATCACTGCGGTCGGCCGCG
ATCCTGTGCTATTCTCAATGGTCTATCAGGATAATCGAGATCCGCTTATC
GGA
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