mRNA_P-wetherbeei_contig5837.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5837.1.1 vs. uniprot
Match: A0A6H5JRT4_9PHAE (Peptidase A1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRT4_9PHAE) HSP 1 Score: 136 bits (343), Expect = 1.970e-35 Identity = 55/89 (61.80%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 1 RLGAQLEYEDTPLFPGYGTHFAYIYVGTPPQRVSVIVDTGSHFTAFPCVGCSNCGDHTDPYYDYETSKTGTVVGCDQCQSNFRCTQSAK 267
R L +EDTPLFPG+GTHFAY+Y GTPPQRVSVI+DTGSHFTAFPC GC NCG HTDP++D S + +V C+ C +FRC + +
Sbjct: 107 RRSLYLSFEDTPLFPGWGTHFAYVYAGTPPQRVSVIIDTGSHFTAFPCSGCKNCGSHTDPHWDQSKSTSSHIVTCEDCHGSFRCQRDKR 195
BLAST of mRNA_P-wetherbeei_contig5837.1.1 vs. uniprot
Match: A0A835ZHP7_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHP7_9STRA) HSP 1 Score: 129 bits (324), Expect = 2.280e-33 Identity = 52/76 (68.42%), Postives = 59/76 (77.63%), Query Frame = 1
Query: 25 EDTPLFPGYGTHFAYIYVGTPPQRVSVIVDTGSHFTAFPCVGCSNCGDHTDPYYDYETSKTGTVVGCDQCQSNFRC 252
E+ PL PGYGTH AY+YVGTPPQRVSVI+DTGSHFTAFPC GC CGDHTD Y+D++ S T T+ C C NF C
Sbjct: 4 EEVPLIPGYGTHIAYVYVGTPPQRVSVILDTGSHFTAFPCKGCKACGDHTDSYWDFDLSSTATLTKCPDCHGNFNC 79
BLAST of mRNA_P-wetherbeei_contig5837.1.1 vs. uniprot
Match: A0A7S3YC94_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YC94_HETAK) HSP 1 Score: 127 bits (318), Expect = 1.260e-32 Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 1
Query: 37 LFPGYGTHFAYIYVGTPPQRVSVIVDTGSHFTAFPCVGCSNCGDHTDPYYDYETSKTGTVVGCDQCQS 240
L+PGYGTHFAY+YVGTPPQRVSVIVDTGSH+TAFPC GCS CG HTDPY+D +S TG +GC +CQS
Sbjct: 62 LYPGYGTHFAYVYVGTPPQRVSVIVDTGSHYTAFPCKGCSGCGSHTDPYFDLSSSSTGHQLGCHECQS 129
BLAST of mRNA_P-wetherbeei_contig5837.1.1 vs. uniprot
Match: A0A7S2FBW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FBW1_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.140e-31 Identity = 48/71 (67.61%), Postives = 56/71 (78.87%), Query Frame = 1
Query: 28 DTPLFPGYGTHFAYIYVGTPPQRVSVIVDTGSHFTAFPCVGCSNCGDHTDPYYDYETSKTGTVVGCDQCQS 240
+ PL+ G GTH+ +IYVGTPPQRVSVIVDTGSH TAFPC GC NCG HTDPY+D + S T VGC QC++
Sbjct: 31 EAPLWEGIGTHYVHIYVGTPPQRVSVIVDTGSHHTAFPCDGCKNCGKHTDPYFDPKKSSTSQTVGCSQCKA 101
BLAST of mRNA_P-wetherbeei_contig5837.1.1 vs. uniprot
Match: A0A6H5LNK8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LNK8_9PHAE) HSP 1 Score: 123 bits (308), Expect = 5.530e-31 Identity = 52/87 (59.77%), Postives = 63/87 (72.41%), Query Frame = 1
Query: 16 LEYEDTPLFPGYGTHFAYIYVGTPPQRVSVIVDTGSHFTAFPCVGCSNCGDHTDPYYDYETSKTGTVVGCDQ---CQSNFRCTQSAK 267
+ +E+TPLF GYGTHFAYIY GTPPQR SVI++TGSHF+AFPC C NCG+HTDPY+D S T +V CD+ C +RC K
Sbjct: 93 MSFEETPLFRGYGTHFAYIYAGTPPQRASVIINTGSHFSAFPCSECKNCGNHTDPYWDPSQSSTAHIVTCDETERCHGAYRCQSDKK 179
BLAST of mRNA_P-wetherbeei_contig5837.1.1 vs. uniprot
Match: A0A835ZJF3_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJF3_9STRA) HSP 1 Score: 115 bits (288), Expect = 5.210e-28 Identity = 46/70 (65.71%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 43 PGYGTHFAYIYVGTPPQRVSVIVDTGSHFTAFPCVGCSNCGDHTDPYYDYETSKTGTVVGCDQCQSNFRC 252
PGYGTH AY+YVGTPPQRVSVI+DTGSH TAFPC GC CG HTDPY+D+ S T + C C+ F C
Sbjct: 5 PGYGTHIAYLYVGTPPQRVSVIIDTGSHLTAFPCKGCQACGKHTDPYWDFAASSTAKITTCAACKGTFTC 74
BLAST of mRNA_P-wetherbeei_contig5837.1.1 vs. uniprot
Match: F0YC49_AURAN (Peptidase A1 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC49_AURAN) HSP 1 Score: 107 bits (268), Expect = 1.120e-27 Identity = 45/69 (65.22%), Postives = 53/69 (76.81%), Query Frame = 1
Query: 46 GYGTHFAYIYVGTPPQRVSVIVDTGSHFTAFPCVGCSNCGDHTDPYYDYETSKTGTVVGCDQCQSNFRC 252
G GTH+A++YVGTPPQRVSVIVDTGSH TAFPC GC +CG HTDPY+D + S T +GC C + RC
Sbjct: 2 GIGTHYAHVYVGTPPQRVSVIVDTGSHHTAFPCSGCKSCGKHTDPYFDPDKSSTLRRLGCSDCVAAARC 70
BLAST of mRNA_P-wetherbeei_contig5837.1.1 vs. uniprot
Match: A0A7S2WCI1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCI1_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.710e-27 Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 19 EYEDTPLFPGYGTHFAYIYVGTPPQRVSVIVDTGSHFTAFPCVGCSNCGDHTDPYYDYETSKTGTVVGCDQCQSNFRCTQ 258
++ D PLF G GTH+A+IYVGTPPQRVSVI+DTGSH TAFPC GC CG HTDP++ S T + + C+ C++ RC +
Sbjct: 74 QFPDIPLFEGIGTHYAFIYVGTPPQRVSVIMDTGSHLTAFPCEGCKTCGSHTDPHFKPSGSSTNSYLPCNACKAGARCVK 153
BLAST of mRNA_P-wetherbeei_contig5837.1.1 vs. uniprot
Match: A0A836CAB1_9STRA (Aspartic peptidase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAB1_9STRA) HSP 1 Score: 105 bits (263), Expect = 6.350e-27 Identity = 44/74 (59.46%), Postives = 51/74 (68.92%), Query Frame = 1
Query: 46 GYGTHFAYIYVGTPPQRVSVIVDTGSHFTAFPCVGCSNCGDHTDPYYDYETSKTGTVVGCDQCQSNFRCTQSAK 267
G GTH AY+YVGTPPQRVSVI+DTGS TAFPC GC CG H DPY+D S T V C QC ++ CT + +
Sbjct: 1 GAGTHVAYVYVGTPPQRVSVILDTGSSNTAFPCTGCQGCGQHEDPYWDRSASSTAQVSSCQQCVGDYTCTAAER 74
BLAST of mRNA_P-wetherbeei_contig5837.1.1 vs. uniprot
Match: A0A8J2SW55_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW55_9STRA) HSP 1 Score: 108 bits (271), Expect = 4.180e-26 Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 31 TPLFPGYGTHFAYIYVGTPPQRVSVIVDTGSHFTAFPCVGCSNCGDHTDPYYDYETSKTGTVVGCDQCQSNFRC 252
TPLF G GTH+A++YVGTP QRVSVIVDTGSH TAFPC GC +CG HTDPY++ S T + C +C + RC
Sbjct: 90 TPLFMGIGTHYAHVYVGTPAQRVSVIVDTGSHHTAFPCAGCKSCGKHTDPYFEPSRSSTLVRLDCSKCVAAARC 163 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5837.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5837.1.1 >prot_P-wetherbeei_contig5837.1.1 ID=prot_P-wetherbeei_contig5837.1.1|Name=mRNA_P-wetherbeei_contig5837.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=90bp RLGAQLEYEDTPLFPGYGTHFAYIYVGTPPQRVSVIVDTGSHFTAFPCVGback to top mRNA from alignment at P-wetherbeei_contig5837:243..931- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5837.1.1 ID=mRNA_P-wetherbeei_contig5837.1.1|Name=mRNA_P-wetherbeei_contig5837.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=689bp|location=Sequence derived from alignment at P-wetherbeei_contig5837:243..931- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5837:243..931- >mRNA_P-wetherbeei_contig5837.1.1 ID=mRNA_P-wetherbeei_contig5837.1.1|Name=mRNA_P-wetherbeei_contig5837.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=270bp|location=Sequence derived from alignment at P-wetherbeei_contig5837:243..931- (Phaeothamnion wetherbeei SAG_119_79)back to top |