mRNA_P-wetherbeei_contig5830.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5830.2.1 vs. uniprot
Match: A0A6H5KDK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK1_9PHAE) HSP 1 Score: 327 bits (839), Expect = 6.520e-102 Identity = 161/234 (68.80%), Postives = 188/234 (80.34%), Query Frame = 1
Query: 52 SEPLLTEWLRKEAAAGDEEAQYCLVKLFSPPPFALRDRCQAPDCGLPFGITCYRHHCRHCGGSFCHAHSWQTHAIPKLALPARQRVCRPCKRRLELEDWSDRVGWRLARVDAYLAGSGRLTPYFDTGLDTGVDKALRCVDGAIYVAKATPGMSTAVKVSAEVMDALIKYGTVGVAGLLLRREFVEAVELLKRASGVDKAWPMSVHEITAAMYYILSERRGERGADPDGEERAHA 753
S+ LL EWLR+EA GDEEAQ+ L +LFSPP F ++ +C+ +CG FG+T YRHHCRHCGGSFCH H+W H IPKL LPA QRVC PCK LELEDW +RV WRL RV+A+L RL YFDTG+DT DKALR VDGAIYVAK+ P + TAVKVS EVMD L+KYGT GVAGL+LRREF+EAVE+LKR SGVDK WPMSVHE+TAAMYY+L++RRGERG+ P+GE AHA
Sbjct: 119 SQDLLLEWLRREAGQGDEEAQFHLAQLFSPPRFEMKPKCR--ECGEDFGVTRYRHHCRHCGGSFCHEHAWHEHPIPKLGLPAPQRVCTPCKHTLELEDWRERVEWRLERVNAFL--ENRLISYFDTGVDTVGDKALRVVDGAIYVAKSAP-LGTAVKVSVEVMDVLMKYGTAGVAGLVLRREFIEAVEVLKRLSGVDKKWPMSVHEMTAAMYYLLAQRRGERGSAPNGEHEAHA 347
BLAST of mRNA_P-wetherbeei_contig5830.2.1 vs. uniprot
Match: D7G566_ECTSI (Zinc finger FYVE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G566_ECTSI) HSP 1 Score: 328 bits (840), Expect = 1.390e-100 Identity = 162/234 (69.23%), Postives = 188/234 (80.34%), Query Frame = 1
Query: 52 SEPLLTEWLRKEAAAGDEEAQYCLVKLFSPPPFALRDRCQAPDCGLPFGITCYRHHCRHCGGSFCHAHSWQTHAIPKLALPARQRVCRPCKRRLELEDWSDRVGWRLARVDAYLAGSGRLTPYFDTGLDTGVDKALRCVDGAIYVAKATPGMSTAVKVSAEVMDALIKYGTVGVAGLLLRREFVEAVELLKRASGVDKAWPMSVHEITAAMYYILSERRGERGADPDGEERAHA 753
S+ LL EWLR+EA GDEEAQ+ L +LFSPP F ++ +C+ +CG FG+T YRHHCRHCGGSFCH H+W H IPKL LPA QRVC PCK LELEDW +RV WRL RV+A+L RL YFDTG+DT DKALR VDGAIYVAK+ P + TAVKVS EVMD L+KYGT GVAGL+LRREFVEAVE+LKR SGVDK WPMSVHE+TAAMYY+L++RRGERG+ P+GE AHA
Sbjct: 432 SQDLLLEWLRREAGQGDEEAQFHLAQLFSPPRFEMKPKCR--ECGEDFGVTRYRHHCRHCGGSFCHEHAWHEHPIPKLGLPAPQRVCTPCKHTLELEDWRERVEWRLERVNAFL--ENRLISYFDTGVDTVGDKALRVVDGAIYVAKSAP-LGTAVKVSVEVMDVLMKYGTAGVAGLVLRREFVEAVEVLKRLSGVDKKWPMSVHEMTAAMYYLLAQRRGERGSAPNGEHEAHA 660
BLAST of mRNA_P-wetherbeei_contig5830.2.1 vs. uniprot
Match: W7TVH7_9STRA (Lipase, class 3 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVH7_9STRA) HSP 1 Score: 226 bits (576), Expect = 4.630e-65 Identity = 122/235 (51.91%), Postives = 151/235 (64.26%), Query Frame = 1
Query: 55 EPLLTEWLRKEAAAGDEEAQYCLVKLFSPPPFALRDRCQAPDCGLPFGITCYRHHCRHCGGSFCHAHSWQTHAIPKLALPARQRVCRPCKRRLELEDWSDRVGWRLARVDAYLAGSGRLTPYFDTGLDTGVDKALRCVDGAIY-VAKATPGMSTAVKVSAEVMDALIKYGTVGVAGLLLRREFVEAVELLKRASGVDKAWPMSVHEITAAMYYILSERRGERGADPDGEERAHAG 756
E L LR +AA GDE+AQY L F PPPF RDRC+ C FG+T YRHHCRHCG SFC HS HAIPK+ RVC CK +LE ED DRV WR+ RV+A+L RL PYF G T +D+ALR V G + A+ P + + ++ E ++ +YG GVAG+LLR E VEAVELLK SGVD AWP++ +++AAMYY+L+ RGERGA PD E+ AH G
Sbjct: 184 ELLRVAELRLQAAQGDEDAQYALAARFCPPPFRKRDRCK--KCHKAFGVTRYRHHCRHCGESFCQEHSAFRHAIPKVGYMVPARVCGACKGQLEDEDLKDRVVWRMVRVEAFL--KDRLIPYFAPGDHTHLDRALRTVGGWVSRAARRAPPLRSTTALAGEALELFSRYGYAGVAGVLLRHEHVEAVELLKAVSGVDAAWPVTGSQLSAAMYYLLARGRGERGAAPDAEQEAHRG 414
BLAST of mRNA_P-wetherbeei_contig5830.2.1 vs. uniprot
Match: A0A4D9D649_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D649_9STRA) HSP 1 Score: 226 bits (576), Expect = 4.050e-64 Identity = 121/235 (51.49%), Postives = 151/235 (64.26%), Query Frame = 1
Query: 55 EPLLTEWLRKEAAAGDEEAQYCLVKLFSPPPFALRDRCQAPDCGLPFGITCYRHHCRHCGGSFCHAHSWQTHAIPKLALPARQRVCRPCKRRLELEDWSDRVGWRLARVDAYLAGSGRLTPYFDTGLDTGVDKALRCVDGAIY-VAKATPGMSTAVKVSAEVMDALIKYGTVGVAGLLLRREFVEAVELLKRASGVDKAWPMSVHEITAAMYYILSERRGERGADPDGEERAHAG 756
E L LR +AA GDE+AQY L F PPPF RDRC+ C FG+T YRHHCRHCG SFC HS HAIPK+ RVC CK +LE ED DR+ WR+ RV+A+L RL PYF G T +D+ALR V G + A+ P + + ++ E ++ +YG GVAG+LLR E VEAVELLK SGVD AWP++ +++AAMYY+L+ RGERGA PD E+ AH G
Sbjct: 180 ELLRVAELRLQAAQGDEDAQYALAARFCPPPFRKRDRCK--KCHKAFGVTRYRHHCRHCGESFCQEHSAFRHAIPKVGYMVPARVCGACKGQLEDEDLKDRIVWRMVRVEAFL--KDRLIPYFAPGDHTQLDRALRTVGGWVSRAARRAPPLRSTTALAGEALELFSRYGYAGVAGVLLRHEHVEAVELLKEVSGVDAAWPVTGSQLSAAMYYLLARGRGERGAAPDAEQEAHRG 410
BLAST of mRNA_P-wetherbeei_contig5830.2.1 vs. uniprot
Match: A0A7S1XVA2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVA2_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.220e-62 Identity = 113/224 (50.45%), Postives = 135/224 (60.27%), Query Frame = 1
Query: 70 EWLRKEAAAGDEEAQYCLVKLFSPPPFALRDRCQAPDCGLPFGITCYRHHCRHCGGSFCHAHSW-QTHAIPKLALPARQRVCRPCKRRLELEDWSDRVGWRLARVDAYLAGSGRLTPYFDTGLDTGVDKALRCVDGAIYVAKATPGMSTAVKVSAEVMDALIKYGTVGVAGLLLRREFVEAVELLKRASGVDKAWPMSVHEITAAMYYILSERRGERGADPDGE 738
EWLR A AGDE+A Y L PPPF L C +C PF T YRHHCR CG S C AHS + H +P L RVC CK L D RV WR RV A+LAG RL PYFD D +KA R V+G I AK +P +S + V E +D L KYG G+AGL++ +EF EA ELLK+ +GV+K WPM VHE+TAA+YY++ RG RGA PD E
Sbjct: 66 EWLRNAAGAGDEDAAYHLASFGVPPPFELAKECY--ECSRPFSATRYRHHCRACGHSICGAHSAAEKHPLPHLGFRVPMRVCTRCKPALRRRDALQRVEWRYERVRAFLAG--RLLPYFDLESDPHSEKAKRAVEGVITAAKYSP-LSVSASVVVETVDLLRKYGYTGLAGLVMHKEFTEAAELLKQVAGVEKKWPMKVHEMTAALYYLVGSSRGRRGAHPDNE 284
BLAST of mRNA_P-wetherbeei_contig5830.2.1 vs. uniprot
Match: A0A835Z9C7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9C7_9STRA) HSP 1 Score: 196 bits (497), Expect = 1.320e-53 Identity = 106/204 (51.96%), Postives = 136/204 (66.67%), Query Frame = 1
Query: 160 DRCQAPDCGLPFGITCYRHHCRHCGGSFCHAHSWQTHAIPKLALPARQRVCRPCKRRLELEDWSDRVGWRLARVDAYLAGSGRLTPYFDTGLDTGVDKALRCVDGAIYVAKATPGMSTAVKVSAEVMDALIKYGTVGVAGLLLRREFVEAVELLKRASGV----DKAWPMSV---HEITAAMYYILSERRGERGADPDGEERAH 750
D C A C PFG YRHHCRHCG SFCH HS + K L A QRVC C ++L+LE R+ WR+AR Y+AGS L PYF+TG+++ KA R GA++VAK TPG+ T KVSAEV + L+K+G G+AGLLLR+EF EA ELL+ A ++A +SV HE+TAA+YY+L++RRG+RGA PD EE+ H
Sbjct: 274 DSCNA--CARPFGTQLYRHHCRHCGLSFCHDHSPHYRPLLKFRLRAPQRVCSGCNQQLDLEACVSRMEWRMARCVGYIAGS--LPPYFETGVESDATKAWRVAGGALFVAKNTPGLGTTFKVSAEVTEVLMKHGMQGLAGLLLRKEFAEAAELLRAACSALPESNRAAALSVGTAHELTAALYYLLAKRRGQRGAAPDAEEQEH 473
BLAST of mRNA_P-wetherbeei_contig5830.2.1 vs. uniprot
Match: A0A7R9W252_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W252_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.040e-50 Identity = 92/194 (47.42%), Postives = 125/194 (64.43%), Query Frame = 1
Query: 181 CGLPFGITCYRHHCRHCGGSFCHAHSWQTHAIPKLALPA--RQRVCRPCKRRLELEDWSDRVGWRLARVDAYLAGSGRLTPYFDTGLDTGVDKALRCVDGAIYVAKATPGMSTAVKVSAEVMDALIKYGTVGVAGLLLRREFVEAVELLKRASGVDK-AWPMSVHEITAAMYYILSERRGERGADPDGEERAHA 753
C F T RHHCR CG S+CH HS TH +P L A +RVC CK LE D ++R+ WR+AR +L G+ LTPYF+TG+DT D ALR AI +AK+ P + V+ E +D L K+G GV GL+LR+EF+ A +LL R +G++K AWP+SVHE++AA++Y L++ R RG DP+ E R H+
Sbjct: 20 CRRSFSSTLLRHHCRLCGRSYCHGHSSWTHRLPHLGYDADVAERVCGECKAALEARDLAERIAWRMARCRDHLGGT--LTPYFETGIDTAEDAALRLARAAIAMAKSIP-LGAQATVAVETLDVLRKHGLKGVYGLILRKEFMAAADLLCRITGINKRAWPLSVHELSAAVFYALAQHRLLRGMDPEREHRIHS 210
BLAST of mRNA_P-wetherbeei_contig5830.2.1 vs. uniprot
Match: A0A7S2RGQ1_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGQ1_9STRA) HSP 1 Score: 187 bits (474), Expect = 2.160e-50 Identity = 95/211 (45.02%), Postives = 133/211 (63.03%), Query Frame = 1
Query: 100 DEEAQYCLVKLFSPPPFALRDRCQAPDCGLPFGITCYRHHCRHCGGSFCHAHSWQTHAIPKLALPARQRVCRPCKRRLELEDWSDRVGWRLARVDAYLAGSGRLTPYFDTGLDTGVDKALRCVDGAIYVAKATPGMSTAVKVSAEVMDALIKYGTVGVAGLLLRREFVEAVELLKRASGVDKAWPMSVHEITAAMYYILSERRGERGADPD 732
+E+ + + +PP + RC C FG+T YRHHCR+CG S CH HS + +P+ R+C C + + R+ WRL R+ AY GRL PYFD +DT V KA R ++G IY+A+ P + + ++ EVMD L KYG G+A L+LRREF+EA ELL++ S VD+AWP+S HE+TAA+YY+L+ +RGERGA+PD
Sbjct: 302 EEDYRVATQCIRAPPHWDEASRCAV--CDRAFGVTRYRHHCRNCGRSVCHDHSSRRKRLPRFGYVTPVRICDDCDTAVTALERQQRIAWRLERLRAYK--HGRLIPYFDLAVDTRVSKARRLLEGTIYLARRAP-LGASATITVEVMDILWKYGPPGLASLVLRREFIEAAELLRKVSSVDEAWPLSAHELTAAIYYLLALKRGERGANPD 507
BLAST of mRNA_P-wetherbeei_contig5830.2.1 vs. uniprot
Match: A0A7S3H6I2_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6I2_9STRA) HSP 1 Score: 178 bits (451), Expect = 2.530e-47 Identity = 96/230 (41.74%), Postives = 133/230 (57.83%), Query Frame = 1
Query: 64 LTEWLRKEAAAGDEEAQYCLVKLFSPPPFALRDRCQAPDCGLPFGITCYRHHCRHCGGSFCHAHSWQTHAIPKLALPARQRVCRPCKRRLELEDWSDRVGWRLARVDAYLAGSGRLTPYFDTGLDTGVDKALRCVDGAIYVAKATPGMSTAVKVSAEVMDALIKYGTVGVAGLLLRREFVEAVELLKRASGVDKAWPMSVHEITAAMYYILSERRGERGADPDGEERAHA 753
+ WL +EA GDE+AQY L + F+PP F C C F IT +RHHCR CG S C HS I + L QRVC C ++ D + WR RV AYL RL PYF+ +D G+DK R D ++ VA+ + K++ + ++ L +YG G GL+LR +F+E+VELLKR SG++ + +S+HE+TA +YY L+ RG RG+ PD E+ AHA
Sbjct: 375 IHSWLVEEATLGDEDAQYALARFFTPPGFMESTCCAI--CDRTFSITLFRHHCRFCGRSVCDDHSTARRCIYRYGLVTPQRVCASCCENIDETHRMDGIIWRDLRVSAYLRN--RLIPYFNPAVDRGIDKVFRVADYSMTVARNALTYNFLAKLALDTVEVLKRYGLTGFTGLMLREDFLESVELLKRISGMESMFSLSLHELTACVYYKLAIERGLRGSHPDSEKLAHA 600
BLAST of mRNA_P-wetherbeei_contig5830.2.1 vs. uniprot
Match: A0A7S4IQ70_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IQ70_9STRA) HSP 1 Score: 162 bits (411), Expect = 5.220e-42 Identity = 96/224 (42.86%), Postives = 131/224 (58.48%), Query Frame = 1
Query: 106 EAQYCLVKLFSPPPFALRDRCQAPDCGL---PFGIT--CYRHHCRHCGGSFCHAHSWQTHAIPKLALP--ARQRVCRPCKRRLELEDWSDRVGWRLARVDAYLAGSGRLTPYFDTGLDTGVDKALRCVDGAIYVAKATPGMSTAVKVSAEVMDALIKYGTVGVAGLLLRREFVEAVELLKRASGVDK-AWPMSVHEITAAMYYILSERRGERGADPDGEERAHA 753
E Y + +P P R A C PF RHHCR CG S+C +HS H +P L +RVC CK LE D ++R+ WR+AR +L S RLTPYF+TG+DT D ALR AI +AK+ P + V+ E +D L K+G GV GL+LR+EF+ A +LL R +G+D+ AWP+SVHE++AA++Y L++ R RG DP+ E R H+
Sbjct: 22 EEAYDFARSIAPRPLPRPPRENASSCYACRRPFSSAGALLRHHCRLCGRSYCQSHSNWEHRLPHLGYDPDVAERVCGECKGALEGRDLAERIAWRMARCRDHL--SRRLTPYFETGVDTAEDAALRLARAAIAMAKSVP-LGAQATVAVETLDVLRKHGLKGVYGLILRKEFLAAADLLCRVTGIDRRAWPLSVHELSAAVFYALAQHRLLRGMDPEREHRIHS 242 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5830.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5830.2.1 >prot_P-wetherbeei_contig5830.2.1 ID=prot_P-wetherbeei_contig5830.2.1|Name=mRNA_P-wetherbeei_contig5830.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp MSVSAGAGSDVVSKGGESEPLLTEWLRKEAAAGDEEAQYCLVKLFSPPPFback to top mRNA from alignment at P-wetherbeei_contig5830:2196..3484+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5830.2.1 ID=mRNA_P-wetherbeei_contig5830.2.1|Name=mRNA_P-wetherbeei_contig5830.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1289bp|location=Sequence derived from alignment at P-wetherbeei_contig5830:2196..3484+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5830:2196..3484+ >mRNA_P-wetherbeei_contig5830.2.1 ID=mRNA_P-wetherbeei_contig5830.2.1|Name=mRNA_P-wetherbeei_contig5830.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig5830:2196..3484+ (Phaeothamnion wetherbeei SAG_119_79)back to top |