mRNA_P-wetherbeei_contig583.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: D8LHG9_ECTSI (Homoserine dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG9_ECTSI) HSP 1 Score: 307 bits (786), Expect = 2.480e-99 Identity = 177/303 (58.42%), Postives = 218/303 (71.95%), Query Frame = 1
Query: 1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAK-GACGDPWPF--QKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVL-------PQDDAGGFVALI--TEVCKHSAVQAMCKALGGKVTLAAEPLVMPL 873
GIPII+++Q +VGD I VMGIMNGTTNFMLTKME EGADY+AVL EAQ LG+AEADPTADVEGHDVQAKIALLAKLAFGQDVA+ VPCAGIS LS+ DFA AK +GCT+KL+GTA +GE D+LAVFVSP +VPL G LA+TRGPGN+VV++++N+ ES Y GPGAGRYPTANSVV+DI+R+A+ GA G P PF ++ +++ D+ A FY+R G G AV A A AGV+V +VL + G V+L+ T+ C S V A L GK A+P+VM +
Sbjct: 138 GIPIIHNMQGSYVGDSIQSVMGIMNGTTNFMLTKMETEGADYAAVLKEAQDLGFAEADPTADVEGHDVQAKIALLAKLAFGQDVALDKVPCAGISNLSSTDFACAKMMGCTIKLVGTA--ALGESK-----DKLAVFVSPVLVPLGGPLASTRGPGNVVVVRSENLTESVYAGPGAGRYPTANSVVNDIVRLARLGAAGTPPPFPLERPLELEPDFEACFYVRVTAADGLGVLSAVGAIASEAGVSVHSVLRGGEGXXXXXEEAGVVSLVVKTDSCLRSQVGAFVDGLKGKKVATADPVVMSI 433
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: A0A835ZAD6_9STRA (Homoserine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD6_9STRA) HSP 1 Score: 275 bits (704), Expect = 4.850e-87 Identity = 155/294 (52.72%), Postives = 198/294 (67.35%), Query Frame = 1
Query: 1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACGDPWPFQKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVL--PQDDAGGFVALIT-EVCKHSAVQAMCKALGGKVTLAAEPLVMPL 873
GIPIIN LQ DF GD ISK+ GIMNGTTNFML+KME EGADY VL EAQALGYAEADPTADVEG DVQAKIALLAKLAFG V V VPC GIS+LS+ DF A+ + T+KLLGTAM G +L+VFVSP +VPL +A RG GNIVV+ ++N+ ++Y+GPGAGR+PTANSVVSDI+R+A+G P+P+ K+W ++D++ FY R G V A+ GV++ +L P +D ++T E C+ S V++ C ++ + +PL M L
Sbjct: 142 GIPIINVLQNDFFGDKISKICGIMNGTTNFMLSKMESEGADYDDVLKEAQALGYAEADPTADVEGLDVQAKIALLAKLAFGATVPVDTVPCQGISQLSSADFEFARMMRSTIKLLGTAML-------NADGSKLSVFVSPVVVPLTSPIAGARGAGNIVVVNSRNVDTTSYSGPGAGRFPTANSVVSDIVRIARGMATPPFPYDKDWTFETDFTGEFYTRITCKDALGIIKRVGELAEENGVSIHAILQNPIEDRDNVDFVVTTEPCRLSQVESFCSSIAKERWAKNKPLCMSL 428
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: D7FNL8_ECTSI (Homoserine dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL8_ECTSI) HSP 1 Score: 274 bits (700), Expect = 1.170e-85 Identity = 154/294 (52.38%), Postives = 198/294 (67.35%), Query Frame = 1
Query: 1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACGDPWPFQKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVL--PQDDAGGFVALIT-EVCKHSAVQAMCKALGGKVTLAAEPLVMPL 873
GIPII +LQ D++GD I KV GIMNGTTNFML+KME EGADY VL EAQ LGYAEADPTADVEG DVQAKIALL KLAFG V + C GIS L++VDF AK + T+KLLGTAMR G++L+VFVSP +VPL +A+ RG GNIV + +KNMG ++++GPGAGRYPTANSVV+DI+R+ G G P+PF KEW+++SD+++ FYLR G V A GV++ +L P +D ++T + CK S V + ++G + PL++ L
Sbjct: 206 GIPIIATLQNDYLGDKILKVCGIMNGTTNFMLSKMESEGADYGEVLKEAQDLGYAEADPTADVEGFDVQAKIALLTKLAFGATVPSDLIQCKGISSLTSVDFEYAKMMKSTIKLLGTAMR-------SPDGEKLSVFVSPVLVPLSHPIASARGAGNIVSVDSKNMGTASFSGPGAGRYPTANSVVNDIVRLGTGKVGSPFPFDKEWELESDFTSAFYLRITCSDDLGIIQRVGELAAENGVSIHAILQNPIEDVDNVDFVVTTDPCKQSQVDELSSSIGQEKWAKGVPLILTL 492
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: A0A7S2WAR1_9STRA (Homoserine dehydrogenase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAR1_9STRA) HSP 1 Score: 270 bits (689), Expect = 6.750e-85 Identity = 156/294 (53.06%), Postives = 198/294 (67.35%), Query Frame = 1
Query: 1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACGDPWPFQKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVLPQ---DDAGGFVALITEVCKHSAVQAMCKALGGKVTLAAEPLVMPL 873
GIPIIN+LQQ V D+IS+VMGIMNGTTNFML+KME EGA YS VLAEAQALGYAEADPTADVEG DVQAKIAL+ KLAFG V A +P AGIS++ AVDF AK + TVKLLGTA + + L+V+VSP +VP + +A+ RG N+V + + N+G S+Y GPGAGR+PTANSVVSD+LR+A P+P Q+ ++ DYSA FY+R V G + A A AGV++ +VL D A + T+ CK S VQA+ + ++ + PLVMP+
Sbjct: 130 GIPIINTLQQGLVSDEISEVMGIMNGTTNFMLSKMEGEGAAYSDVLAEAQALGYAEADPTADVEGFDVQAKIALITKLAFGVTVDPASIPTAGISKIDAVDFEYAKLMNATVKLLGTARLSPSK-------ESLSVYVSPVVVPQLHPVASARGATNVVSVASSNLGSSSYVGPGAGRFPTANSVVSDVLRVAMDTTTPPFPLQRTLPLEPDYSACFYVRITVKDQLGIIANIGAIAAKAGVSIFSVLQNPITDPAKVDFVVTTDQCKRSQVQAVADEVSAQLFTVSPPLVMPM 416
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: A0A835YR06_9STRA (Homoserine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR06_9STRA) HSP 1 Score: 268 bits (685), Expect = 9.910e-85 Identity = 143/225 (63.56%), Postives = 172/225 (76.44%), Query Frame = 1
Query: 1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAK--LAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACGD---PWPFQKEWQMDSDYSARFYLR 660
GIPII +LQQD+VGD I+KV+GIMNGTTNFMLTKME EGADY+AVL EAQ LG+AEADPTADVEGHDVQAKIALLAK LAFGQ V ++ VPCAGIS L+A DFA AK++ CT+KLLGTA + + D L V+VSP + PL AA RGPGN+VV+ ++N+ ES Y GPGAGRYPTANSVVSD+ R+A G C P P + + +D++ARFY+R
Sbjct: 138 GIPIIAALQQDYVGDSITKVVGIMNGTTNFMLTKMEQEGADYAAVLKEAQDLGFAEADPTADVEGHDVQAKIALLAKANLAFGQTVPLSSVPCAGISALTAADFAFAKSINCTIKLLGTAATASSDPA-----DPLTVYVSPALAPLDSPFAAARGPGNVVVVSSENLTESQYAGPGAGRYPTANSVVSDVARLAHGTCAAAPFPQPPRAPRALAADFAARFYVR 357
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: A0A7S1Z3Y2_TRICV (Homoserine dehydrogenase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3Y2_TRICV) HSP 1 Score: 266 bits (679), Expect = 1.050e-84 Identity = 156/298 (52.35%), Postives = 203/298 (68.12%), Query Frame = 1
Query: 1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRV--IGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACG-DPWPFQKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVL--PQDDAGG--FVALITEVCKHSAVQAMCKALGGKVTLAAEPLVMPL 873
GIPIIN+LQ + GD + +VMGI NGTTN+ML KME GADYS VL EAQ LGYAEADPTADVEGHDV+AKIA+LAKLAFG V V +PC GI+ ++AVDF A+ LGCTVKL+GTA R+ GE G L+V+V+P +VP LA+ RG GN V + + N+G ++YTGPGAGRYPTA+SVV+D+ R+A G C DP+P + ++D+DY++ FY+R + G V A+ GV++ ++L P DD G FV + TE CK S V MC+ + G+ PL MP+
Sbjct: 21 GIPIINALQSCYAGDVVHEVMGICNGTTNYMLGKMET-GADYSDVLREAQDLGYAEADPTADVEGHDVRAKIAILAKLAFGTTVPVESIPCMGITGVTAVDFEYARLLGCTVKLVGTAARLSKYGERDGA-----LSVYVAPKVVPNSHLLASARGCGNAVAVDSANLGVASYTGPGAGRYPTASSVVADVRRIADGLCPPDPFPLESSIELDNDYTSNFYVRISFADSLGIVRRVGEIAERRGVSIHSILQNPIDDRGAADFV-VTTEACKLSQVTGMCEDVAGEDFARGPPLCMPM 311
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: A0A7S2KEY7_9STRA (Homoserine dehydrogenase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KEY7_9STRA) HSP 1 Score: 265 bits (678), Expect = 5.090e-83 Identity = 153/299 (51.17%), Postives = 204/299 (68.23%), Query Frame = 1
Query: 1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRV--IGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACGDPWPF---QKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVLPQDDAGGFVA---LITEVCKHSAVQAMCKALGGKVTLAAEPLVMPL 873
GIPIIN+LQ + GD I++VMGI NGTTN+ML KME EGA+Y VL EAQ LGYAEADPTADVEGHDV+AKIA+LAKLAFGQ V V +PC+GI+++S+VDF AK LGCT+KL+GTA R+ GE G L+V+V+P +VP+ LA+ RG GN V + + N+G ++YTGPGAGRYPTA+SVV+DI R+A G+C P+P ++D+DY++ FY+R + G G +V A+A GV++ +VL A + TE CK S V ++C + + PL MP+
Sbjct: 136 GIPIINTLQTCYTGDIINEVMGICNGTTNYMLGKME-EGAEYDEVLKEAQDLGYAEADPTADVEGHDVRAKIAILAKLAFGQTVPVDTIPCSGITQISSVDFEYAKLLGCTIKLVGTAARLSEYGEHDGA-----LSVYVTPKIVPMTHLLASARGSGNAVAVNSSNLGTASYTGPGAGRYPTASSVVADICRVADGSCSAPFPSVTSTSSIEIDNDYTSAFYIRISFQDGLGIIRSVGELAEAHGVSINSVLQNPIRNRMEADFVVTTESCKLSQVVSLCDDIAKQEYCRMPPLSMPI 428
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: B8C6V8_THAPS (Homoserine dehydrogenase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C6V8_THAPS) HSP 1 Score: 257 bits (656), Expect = 8.880e-80 Identity = 143/295 (48.47%), Postives = 201/295 (68.14%), Query Frame = 1
Query: 1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACG-DPWPFQKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVLPQ---DDAGGFVALITEVCKHSAVQAMCKALGGKVTLAAEPLVMPL 873
GIPII++LQ + GD I++VMGI NGTTN+ML KME +G DY VL EAQ LGYAEADPTADVEGHDV+AKIA+LAKLAFG VAV +PC GI+ +S VDF+ AK++GCT+KL+GTA R + G+ L+V+VSP +VP LA+ G GN V + + N+G ++Y+GPGAGRY TANSVV+DI+R+A C +P+P ++D+DY + FY+R + G G +V A++ V++ ++L Q D + TE C++S V+A+C+ + + + P+ MP+
Sbjct: 139 GIPIIHTLQSCYKGDIINEVMGICNGTTNYMLGKME-DGCDYDEVLKEAQDLGYAEADPTADVEGHDVRAKIAILAKLAFGTTVAVDSIPCMGITDISVVDFSYAKSMGCTIKLVGTAAR---QSEFGEHDGALSVYVSPKIVPNNHLLASATGCGNAVAVDSANLGTASYSGPGAGRYATANSVVADIMRIANSTCASNPFPLSSNIEIDNDYVSPFYIRISFSDGLGIIKSVGELAESQEVSIHSILQQPITDRMNADTVVTTEACRYSQVKALCELIEEEDFALSPPVFMPM 429
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: A0A6V1RNX4_HETAK (Homoserine dehydrogenase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RNX4_HETAK) HSP 1 Score: 252 bits (644), Expect = 3.270e-77 Identity = 131/223 (58.74%), Postives = 166/223 (74.44%), Query Frame = 1
Query: 1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACGDPWPFQKEWQMDSDYSARFYLRFAV 669
GIPII++LQ D++GD I K++GIMNGTTNFMLTKME EGADY+AVLAEAQALGYAEADPTADVEGHDVQAKIAL+AKLAFG V V +PC GIS + ++DF AK +G T+KL G A EG +L+V+VSP +VP LA+ R NIV + + NMG ++Y GPGAGRYPTANSVV+D++R A+G G +P E +++ DY ++FY+R +
Sbjct: 213 GIPIIHTLQNDYLGDKIRKILGIMNGTTNFMLTKMESEGADYAAVLAEAQALGYAEADPTADVEGHDVQAKIALVAKLAFGVGVPVEAIPCKGISAIQSIDFQYAKQMGATIKLAGVA-DASREG-------QLSVYVSPVVVPRTHPLASARMATNIVEVTSDNMGSTSYVGPGAGRYPTANSVVNDVVRAARGLTGTAFPVDAEARIEGDYVSKFYVRIKI 427
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Match: W7TUB9_9STRA (Homoserine dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUB9_9STRA) HSP 1 Score: 248 bits (634), Expect = 1.420e-76 Identity = 142/274 (51.82%), Postives = 185/274 (67.52%), Query Frame = 1
Query: 1 GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGQDVAVAGVPCAGISRLSAVDFANAKALGCTVKLLGTAMRVIGEGSGGKGGDRLAVFVSPTMVPLVGALAATRGPGNIVVLQTKNMGESTYTGPGAGRYPTANSVVSDILRMAKGACGDPWPFQKEWQMDSDYSARFYLRFAVDGGGGSDGAVEAAADAAGVTVATVL--PQDDAGGFVALIT-EVCKHSAVQA 813
GIPII++LQ D++GD +S+++GIMNGTTNFMLTKME GADY VLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFG V +P GIS +++VDF A+ L T+KLLG A G +L+V VSP +VP +A T G NIV + ++N+ S+Y GPGAGRYPTANS+VSD++R+A+G G P+P + ++ DY++RFY+R + G V A+ GV++ +L P D ++T E +HS VQA
Sbjct: 138 GIPIIHTLQNDYLGDQVSQILGIMNGTTNFMLTKME-SGADYGQVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGVHVPSDQIPTKGISSVASVDFEYARLLNATIKLLGMAQL-------SPDGKKLSVAVSPFIVPREHPIAGTNGSTNIVNISSRNLVSSSYIGPGAGRYPTANSIVSDLVRLARGLVGPPFPVDRAMPLEPDYTSRFYIRLRIRDQLGVIRVVGEIAERHGVSIYAILQNPISDPNDIHFVVTTEPARHSQVQA 403 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig583.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig583.1.1 >prot_P-wetherbeei_contig583.1.1 ID=prot_P-wetherbeei_contig583.1.1|Name=mRNA_P-wetherbeei_contig583.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=293bp GIPIINSLQQDFVGDDISKVMGIMNGTTNFMLTKMELEGADYSAVLAEAQback to top mRNA from alignment at P-wetherbeei_contig583:157..1035+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig583.1.1 ID=mRNA_P-wetherbeei_contig583.1.1|Name=mRNA_P-wetherbeei_contig583.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=879bp|location=Sequence derived from alignment at P-wetherbeei_contig583:157..1035+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig583:157..1035+ >mRNA_P-wetherbeei_contig583.1.1 ID=mRNA_P-wetherbeei_contig583.1.1|Name=mRNA_P-wetherbeei_contig583.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=879bp|location=Sequence derived from alignment at P-wetherbeei_contig583:157..1035+ (Phaeothamnion wetherbeei SAG_119_79)back to top |