mRNA_P-wetherbeei_contig58287.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58287.1.1 vs. uniprot
Match: A0A7C4Y1B3_9HYPH (YkgJ family cysteine cluster protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4Y1B3_9HYPH) HSP 1 Score: 104 bits (259), Expect = 2.800e-24 Identity = 69/166 (41.57%), Postives = 88/166 (53.01%), Query Frame = 1
Query: 1 RALLKQGEAVIKAGLAVSPAKSDLVAVAFTLGQLLRDKADAARASAAARMAAGLLEASQRRTPGTARLACAKGCGSCCHSWVGATAPEIFLLAQALRADAARRPGEIARVVAASRVTAGLPAQERFGAKLPCPLLVDNACSRYRERPAVCRQVTSLDLSACLEEYE 498
R L GEA + GL +P DL+ + L + L AA +A A +A + S R A LAC KGC CC++ V TAPE F LA+A+R D A +A + TAG+ A +RFG KLPCPLL D C+ Y RP CR+V S + C EEYE
Sbjct: 13 RELADLGEAAARRGLPRAPQFDDLLGLTLLLRRALGGTG-AASPAACAEIAHRTFDVSARTDRDAAPLACRKGCAYCCYAAVMITAPEAFRLARAVRTDKATP------FLARAAATAGMSAAQRFGRKLPCPLLKDGLCTVYAARPLSCRRVASFAVEPCREEYE 171
BLAST of mRNA_P-wetherbeei_contig58287.1.1 vs. uniprot
Match: A0A3N1KS25_9PROT (Putative zinc-or iron-chelating protein n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1KS25_9PROT) HSP 1 Score: 84.3 bits (207), Expect = 6.090e-17 Identity = 56/127 (44.09%), Postives = 65/127 (51.18%), Query Frame = 1
Query: 127 RASAAARMAAGLLEASQRRTPGTARLACAKGCGSCCHSWVGATAPEIFLLAQALRA----DAARRPGEIARVVAASRVTAGLPAQERFGAKLPCPLLVDNACSRYRERPAVCRQVTSLDLSACLEEY 495
RA AAR EA R P +AC GC CCH V A APEIFLLA+A+RA DA R IA + AA TAG+ ER L CP+L D C Y +RP CR S D+ AC +
Sbjct: 32 RAPYAARALHRAFEAMAPREP----VACRAGCNYCCHQVVSARAPEIFLLARAIRALPAADADRLSARIADMAAA---TAGMDVAERHRRNLACPILEDGRCRLYADRPLACRAFASTDVEACARAF 151
BLAST of mRNA_P-wetherbeei_contig58287.1.1 vs. uniprot
Match: B8EN76_METSB (Uncharacterized protein n=2 Tax=Methylocella silvestris TaxID=199596 RepID=B8EN76_METSB) HSP 1 Score: 76.3 bits (186), Expect = 8.650e-14 Identity = 40/97 (41.24%), Postives = 56/97 (57.73%), Query Frame = 1
Query: 202 LACAKGCGSCCHSWVGATAPEIFLLAQALRADAARRPGEIAR-VVAASRVTAGLPAQERFGAKLPCPLLVDNACSRYRERPAVCRQVTSLDLSACLE 489
LAC +GC +CC V ATAPEI L+A+A+++ + ++ R + AA+R T L +R PCP + DN C Y RP CR S D +ACL+
Sbjct: 55 LACRRGCATCCAVRVVATAPEILLIARAIKSQRRKAAEDLGRRIAAAARATRQLDELDRMALAAPCPFVGDNICLIYAIRPLACRSHVSFDEAACLD 151
BLAST of mRNA_P-wetherbeei_contig58287.1.1 vs. uniprot
Match: UPI0003FEB545 (YkgJ family cysteine cluster protein n=1 Tax=Azohydromonas australica TaxID=364039 RepID=UPI0003FEB545) HSP 1 Score: 73.6 bits (179), Expect = 8.790e-13 Identity = 44/100 (44.00%), Postives = 54/100 (54.00%), Query Frame = 1
Query: 202 LACAKGCGSCCHSWVGATAPEIFLLAQALRADAARRPGEIARVVAASRV----TAGLPAQERFGAKLPCPLLVDNACSRYRERPAVCRQVTSLDLSACLE 489
LAC +GC +CC VGATAPE+ L+A+ LRA R +VA R TAGL +ER + CP + AC Y RP CR S DL AC+E
Sbjct: 54 LACGRGCATCCTLRVGATAPEVLLVARFLRAVTPRLLERGVDLVAGLREADARTAGLAERERVALRQRCPFIAQGACVIYPVRPLACRGHASHDLKACIE 153
BLAST of mRNA_P-wetherbeei_contig58287.1.1 vs. uniprot
Match: A0A6I4M400_9SPHN (Uncharacterized protein n=1 Tax=Sphingorhabdus profundilacus TaxID=2509718 RepID=A0A6I4M400_9SPHN) HSP 1 Score: 72.4 bits (176), Expect = 2.980e-12 Identity = 42/111 (37.84%), Postives = 58/111 (52.25%), Query Frame = 1
Query: 166 EASQRRTPGTARLACAKGCGSCCHSWVGATAPEIFLLAQALRADAARRPGEIARVVAASRVTAGLPAQERFGAKLPCPLLVDNACSRYRERPAVCRQVTSLDLSACLEEYE 498
+ S R + +LAC+KGC SCC+ V E+F +A+ LR A+ GE +A +A + PC LVD CS + +RP CR + SLDLSACL +E
Sbjct: 65 DVSMARHKPSQKLACSKGCESCCYQQVSVNGVEVFYIARRLRR--AKLIGEHEARIAKKLASADRDSGRLLDPANPCAFLVDGVCSIHVDRPFACRAMVSLDLSACLRRFE 173
BLAST of mRNA_P-wetherbeei_contig58287.1.1 vs. uniprot
Match: A0A3D5RPP6_9PROT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A3D5RPP6_9PROT) HSP 1 Score: 72.0 bits (175), Expect = 4.430e-12 Identity = 52/166 (31.33%), Postives = 84/166 (50.60%), Query Frame = 1
Query: 1 RALLKQGEAVIKAGLAVSPAKSDLVAVAFTLGQLLRDKADAARASAAARMAAGLLEASQRRTPGTARLACAKGCGSCCHSWVGATAPEIFLLAQALRADAARRPGEIARVVAASRV-TAGLPAQERFGAKLPCPLLVDNACSRYRERPAVCRQVTSLDLSACLEEY 495
R LLK + +A++ + A + +LRD + RAS + A L E + R + T +LACAKGC CCH++V E+F +A L+ +R +I + + T+G+ Q+++ + +PCPLL ++CS + RP CR S D +C Y
Sbjct: 11 RRLLKADSRWVGKPIALNKGREPFEANIRHMVSILRDDKNMYRASEVSEYAHRLHEITMRASKPT-KLACAKGCYYCCHTFVTVVPAEVFRVAGVLQ----KRSDDIVNHIKETHAKTSGISQQDKWRSLVPCPLLDADSCSIHEVRPLTCRGCVSTDAESCKRIY 171
BLAST of mRNA_P-wetherbeei_contig58287.1.1 vs. uniprot
Match: UPI0008370C20 (YkgJ family cysteine cluster protein n=1 Tax=Azohydromonas lata TaxID=45677 RepID=UPI0008370C20) HSP 1 Score: 69.7 bits (169), Expect = 2.370e-11 Identity = 42/100 (42.00%), Postives = 52/100 (52.00%), Query Frame = 1
Query: 202 LACAKGCGSCCHSWVGATAPEIFLLAQALRADAARRPGE----IARVVAASRVTAGLPAQERFGAKLPCPLLVDNACSRYRERPAVCRQVTSLDLSACLE 489
LAC KGC +CC VGATAPE+ L+A+ LRA R +A + A TAGL R + CP + AC Y RP CR S DL AC++
Sbjct: 54 LACGKGCATCCTLRVGATAPEVLLVARFLRAVTPRLLERGIDLVATLREADAQTAGLTEAARVRLRQRCPFIAQGACVIYTVRPLACRGHASHDLKACVD 153
BLAST of mRNA_P-wetherbeei_contig58287.1.1 vs. uniprot
Match: UPI00055EE941 (YkgJ family cysteine cluster protein n=1 Tax=Methylocapsa aurea TaxID=663610 RepID=UPI00055EE941) HSP 1 Score: 68.9 bits (167), Expect = 4.790e-11 Identity = 39/99 (39.39%), Postives = 54/99 (54.55%), Query Frame = 1
Query: 196 ARLACAKGCGSCCHSWVGATAPEIFLLAQALRADAARRPGEIARVVA-ASRVTAGLPAQERFGAKLPCPLLVDNACSRYRERPAVCRQVTSLDLSACLE 489
A LAC GC SCC V ATAPEI L+A+A+++ E++R +A A R T L ++R + CP + + C Y RP CR S D AC++
Sbjct: 57 AALACHGGCASCCTIRVAATAPEILLIARAIKSSPKTMEFELSRKIAGADRATQQLDERQRMESGFACPFIARDLCVIYSVRPLACRGHASFDERACID 155
BLAST of mRNA_P-wetherbeei_contig58287.1.1 vs. uniprot
Match: UPI001C999FCC (hypothetical protein n=1 Tax=Methylosinus sp. Sm6 TaxID=2866948 RepID=UPI001C999FCC) HSP 1 Score: 68.2 bits (165), Expect = 9.880e-11 Identity = 43/104 (41.35%), Postives = 55/104 (52.88%), Query Frame = 1
Query: 190 GTARLACAKGCGSCCHSWVGATAPEIFLLAQALRADAARRPGE----IARVVAASRVTAGLPAQERFGAKLPCPLLVDNACSRYRERPAVCRQVTSLDLSACLE 489
GT LAC C +CC V A+APEIFL+A+ + A+AA +AR+ A + AGL ER K CP + + C YR RP CR S D +AC E
Sbjct: 55 GTPALACKGDCPTCCVLRVVASAPEIFLVARFVAANAALLAQHGIDLVARIEATAAAAAGLGEIERMALKRICPFIENGLCLAYRVRPLACRGHASYDEAACRE 158
BLAST of mRNA_P-wetherbeei_contig58287.1.1 vs. uniprot
Match: UPI000FDCA6AE (YkgJ family cysteine cluster protein n=1 Tax=Mesorhizobium sp. M7A.F.Ce.TU.012.03.2.1 TaxID=2493681 RepID=UPI000FDCA6AE) HSP 1 Score: 65.9 bits (159), Expect = 7.530e-10 Identity = 40/95 (42.11%), Postives = 50/95 (52.63%), Query Frame = 1
Query: 205 ACAKGCGSCCHSWVGATAPEIFLLAQALRADAARRPGEIARVVAASRVTAGLPAQE--RFGAKLPCPLLVDNACSRYRERPAVCRQVTSLDLSAC 483
AC GC +CCH V + EIF+LAQ L + R E+A + + LP R+G+ CPLLVDN CS Y RPAVCR + S C
Sbjct: 72 ACRAGCSACCHQMVLCSPFEIFILAQLLLST--RTDDELASIERRLSEISKLPLNPDARYGSHATCPLLVDNQCSVYDRRPAVCRALFSNSRERC 164 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58287.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58287.1.1 >prot_P-wetherbeei_contig58287.1.1 ID=prot_P-wetherbeei_contig58287.1.1|Name=mRNA_P-wetherbeei_contig58287.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp RALLKQGEAVIKAGLAVSPAKSDLVAVAFTLGQLLRDKADAARASAAARMback to top mRNA from alignment at P-wetherbeei_contig58287:3..500- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58287.1.1 ID=mRNA_P-wetherbeei_contig58287.1.1|Name=mRNA_P-wetherbeei_contig58287.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig58287:3..500- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58287:3..500- >mRNA_P-wetherbeei_contig58287.1.1 ID=mRNA_P-wetherbeei_contig58287.1.1|Name=mRNA_P-wetherbeei_contig58287.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig58287:3..500- (Phaeothamnion wetherbeei SAG_119_79)back to top |