mRNA_P-wetherbeei_contig5825.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5825.1.1
Unique NamemRNA_P-wetherbeei_contig5825.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: A0A835ZAI6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAI6_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.960e-43
Identity = 133/308 (43.18%), Postives = 168/308 (54.55%), Query Frame = 2
Query:  269 KVSLARSYGLCAQLECLDYARHPHWLLADLSREQARNPAAALNTGDCSYDGGSVGHGGGNRPDRRGSAASPASAAARAPVAAKDCATALRMAPQPPPPLQPPQWLEQMREVAHTLAVGHRRGVGGRVLPQFFLQDGLNGAALLLRVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRLLRGVPGQLPALEPAGVRWETAWRV 1192
            +V+LARSYGL  Q+ CLD  RH HW+LAD+SRE+ +  A    +G+  +             +R G                                      +E M+EV   L VG  R   GRVLP+FFL  GLN +AL LR  +WL PCPEA ++LLDWARA+P AGGV++VL A++   L GD  TA+KL FAQQLVS Q            XXXXXXXXXXXXXXX +A   +T        RNA  + E+ R+   G +RVG++YG LHMRDLQ RL RG  G    ++  GVRW TAW +
Sbjct:   69 QVALARSYGLAPQMMCLDLRRHQHWVLADMSRERLQ--ALQRESGEAVWG------------ERLGI-------------------------------------VEHMQEVGKALVVG--RTADGRVLPKFFLTGGLNASALALRALMWLMPCPEAQVMLLDWARAWPAAGGVSAVLSAVIDRVLAGDIATAKKLAFAQQLVSGQRSGXXXXXXXXXXXXXXXXXXXXXXXXXSADVLMTG-------RNAEVMRELRRSRLAGLQRVGVMYGCLHMRDLQERL-RGELG----MDRVGVRWVTAWDI 311          
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: A0A6H5K168_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K168_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 4.870e-43
Identity = 157/520 (30.19%), Postives = 215/520 (41.35%), Query Frame = 2
Query:  278 LARSYGLCAQLECLDYAR-------------------------------HPHWLLADLSREQARNPAAALNTGDCSYDGGSVGHGGGNRPDRRGSAASPASAAARAPVAAKDCATALRMAPQPPPPLQPPQWLEQMREVAHTLAVGHRRGVGGRVLPQFF--LQDGLNGAALLLRVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRLLRGVPGQLPALEP-AGVRWETAWRVATVLSRSAVPWQQQQQWRVGGNRNGSDAAAPKIREAMASTVAEVEAMAAKIPREAREAAQAFGVAASEASDXXXXXXXXALSPAELLYSHAPLALLAAAYVTIGAWDWADTISTMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVAAAALYVVRHAYMYYGLSKFLVQWDEKLF 1735
            LAR+YGL AQL CL+Y                                  P W+LADL+R++ R+        +       +G GG                                             W   + EV   L VG  R  G ++LP+F+  L   LN  AL+LR  LWL PCPEA+++  DWAR+YPRAGG++ +  A+  S L GDF TA+KLGFAQQ+VS Q     AG G                     S  +      ++ RN V V E  RA  +GCR++ +LYGGLHM+DL  +L +    QL A +  AG  W TAW V T   + A                  +AA   +   MAS     +A A ++     +A    G+   E +             A+ +    PL + A AYV +GAWDW DT+  +A                                  A+    LYV RHAY+YYGL+++LVQW++KLF
Sbjct:  164 LARNYGLSAQLNCLNYCHLCKERTDDGTSXXXXXXXXXXXXXXXXXSNGGPRWVLADLTRDEIRSLQQQAGEKE-------IGQGG---------------------------------------------WQGFIDEVTRALVVG--RQAGDKILPKFYPPLGSTLNRPALVLRALLWLTPCPEAEIMCYDWARSYPRAGGLSVLASAIAESVLSGDFFTAKKLGFAQQIVSGQ-----AGGG-----------------NWGQSNAIV-----VKARNQVVVEETERALVEGCRKIMVLYGGLHMQDLTFQLCK----QLDATQDIAG--WRTAWVVPTKARQKA------------------NAATSPVPPRMASA----DAAAGRL----EQAQGQVGMLGDETN-------------ADGMARWGPLGVAALAYVAVGAWDWTDTVEALARELETDGSPLEAFG-------------------SALLVFTLYVARHAYLYYGLARWLVQWEKKLF 538          
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: D8LF12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF12_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 2.080e-29
Identity = 106/328 (32.32%), Postives = 146/328 (44.51%), Query Frame = 2
Query:  752 DWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRLLRGVPGQLPALEPAGVRWETAWRVATVLSRSAVPWQQQQQWRVGGNRNGSDAAAPKIREAMASTVAEVEAMAAKIPREAREAAQAFGVAASEASDXXXXXXXXALSPAELLYSHAPLALLAAAYVTIGAWDWADTISTMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVAAAALYVVRHAYMYYGLSKFLVQWDEKLF 1735
            DWAR+YPRAGG++ +  A+  S L GDF TA+KLGFAQQ+VS Q     AG G                     S  +      ++ RN V V E  RA  +GCR++ +LYGGLHM+DL  +L +    QL A +     W TAW V T   + A                  +AA   +   MAS     +A A ++  E  +     G+   E +             A+ +    PL + A AYV +GAWDW DT+  +A                                  A+    LYV RHAY+YYGL+++LVQW++KLF
Sbjct:    4 DWARSYPRAGGLSVLASAIAESVLSGDFFTAKKLGFAQQIVSGQ-----AGGG-----------------NWGQSDAIV-----VKARNQVVVEETERALAEGCRKIMVLYGGLHMQDLTSQLCK----QLDATQDI-TGWRTAWVVPTRARQKA------------------NAATSPVPPRMASA----DAAAGRL--EQGQGQGQVGMLGDETN-------------ADGMARWGPLGVAALAYVAVGAWDWTDTVEALARELETGGPPLEAFG-------------------SALLVFTLYVARHAYLYYGLARWLVQWEKKLF 243          
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: W7TQV4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQV4_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.230e-20
Identity = 105/395 (26.58%), Postives = 152/395 (38.48%), Query Frame = 2
Query:  641 GRVLPQF-FLQDGLNGAAL---LLRVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRLL-------------RGVPGQLP---ALEPAGVRWETAWRV-ATVLSRSAVPWQQQQQWRVGGNRNGSDAAAPKIREAMASTVAEVEAMAAKIPREAREAAQAFGVAASEASDXXXXXXXXALSPAELLYSHAPLALLAAAYVTIGAWDWADTISTMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVAAAA---------LYVVRHAYMYYGLSKFLVQWDEKLF 1735
            G+VLP+F FL+ G   +AL   +LR+ +WL P PE  LLLLDWAR YP AGG++ VL +MV + ++GDF T R+L FAQ L SSQ                                T    E  +Q R++  V +V +A   G + VG+LYGGLH++D++ +L              +G  GQ       E   V+W TAW + A    R A+                                  V A+   +P                                             A Y+++G  DW+ T   +A                                 E  AA A         LY++RH Y+YYGLS+++V+W+++LF
Sbjct:  289 GKVLPKFLFLRPGQAFSALPFRVLRLCMWLTPAPELQLLLLDWARQYPPAGGLSRVLRSMVGALVQGDFLTLRRLAFAQMLTSSQ--------------------------------TAPAPEVLVQERDSKVVLDVEQALRTGAKDVGVLYGGLHLKDIEAKLRGHLNFTRVEGGMEKGAGGQETLKRGREAQAVQWHTAWTMQAFTRQRQAL----------------------------------VTALCVALP---------------------------------------------ALYLSVGGLDWSATFGGLAKDVSQHVAT------------------------EGTAAEAPTVGWQEVVLYMLRHMYIYYGLSRWVVEWEKQLF 548          
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: A0A6U9RMG6_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RMG6_9CHLO)

HSP 1 Score: 84.7 bits (208), Expect = 1.050e-13
Identity = 56/142 (39.44%), Postives = 75/142 (52.82%), Query Frame = 2
Query:  695 LLRVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRL 1120
            L+R  LW+ PCPEA LLLLDWA    + G    +L  + ++ L  D+  ++KL FAQ LVS Q+    A D                       TTL      +  RN  A+A V++A  DGC+R+ +LYGGLHM+DL RRL
Sbjct:  221 LVRALLWITPCPEAGLLLLDWAW---QGGRPAPILLPLASALLALDYPASQKLVFAQDLVSGQASGFTATD---------------------PETTL------IGKRNEAAIAAVSQAIEDGCKRIAVLYGGLHMKDLSRRL 332          
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: A0A7S0VUI0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VUI0_9CRYP)

HSP 1 Score: 84.7 bits (208), Expect = 1.710e-13
Identity = 66/174 (37.93%), Postives = 83/174 (47.70%), Query Frame = 2
Query:  698 LRVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRLLRGVPGQLPALEPAGVRWETAWRVATVLSRSAV 1219
            LR  +WL PCPE  LLLLDW+      G V+ VL  M++S L  D +T  KL FAQ L+SS ++                                 P    +  RN VAV E+ RA  +G     +LYGGLH  DL RRL RG+       E AG RW +AWRVA   S+ A+
Sbjct:  341 LRTPMWLVPCPEGALLLLDWS--LSARGRVSEVLGGMLSSLLSFDLQTCGKLSFAQ-LLSSGNMRCEG-----------------------------PQTVIIGERNKVAVRELRRALAEGVGSTALLYGGLHGEDLDRRL-RGM-----GFERAGHRWVSAWRVAVPDSKGAL 476          
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: A0A7S0KSU8_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KSU8_MICPS)

HSP 1 Score: 79.7 bits (195), Expect = 2.870e-13
Identity = 64/172 (37.21%), Postives = 79/172 (45.93%), Query Frame = 2
Query:  713 WLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAAT-DGCRRVGILYGGLHMRDLQRRLLRGVPGQLPALEPAGVRWETAWRVATVLSRSAVPW 1225
            WL PCPEA LLLLDW       G    VL A++ S   G+   AR+L FAQ +VS+Q+   A G GA                              ++ RN VA   +A A    G  RV +LYGGLHM  L RRL  G+      LEP+  RW   WRV    + +AV W
Sbjct:    4 WLVPCPEAHLLLLDWVWG---GGRPAPVLGALLDSLAGGNIIAARRLAFAQMIVSAQAKG-AVGGGA-------------------------DVPVLVERRNDVATECLAVALNAPGVSRVTLLYGGLHMPGLTRRLTEGL-----GLEPSTQRWRAVWRVEPPGANNAVRW 141          
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: C1FJM4_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FJM4_MICCC)

HSP 1 Score: 80.9 bits (198), Expect = 2.650e-12
Identity = 64/176 (36.36%), Postives = 81/176 (46.02%), Query Frame = 2
Query:  701 RVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAA-TDGCRRVGILYGGLHMRDLQRRLLRGVPGQLPALEPAGVRWETAWRVATVLSRSAVPW 1225
            R+  WL PCPEA LLLLDW       G    VL A++ S   G+   AR+L FAQ +VS+Q+   A G GA                              ++ RN VA   +A+A    G  RV +LYGGLHM  L RRL   +      LEP+  RW   WRV    + +AV W
Sbjct:  315 RLVCWLVPCPEAHLLLLDWVWG---GGRPAPVLGALLDSLAGGNIIAARRLAFAQMIVSAQAKG-AVGGGA-------------------------DVPVLVERRNDVATECLAKALDAPGVSRVSLLYGGLHMPGLTRRLTEQL-----GLEPSTQRWRAVWRVEPPGANNAVRW 456          
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: A0A7S1ECB4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1ECB4_HEMAN)

HSP 1 Score: 79.7 bits (195), Expect = 4.490e-12
Identity = 61/174 (35.06%), Postives = 77/174 (44.25%), Query Frame = 2
Query:  698 LRVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRLLRGVPGQLPALEPAGVRWETAWRVATVLSRSAV 1219
            LR  +WL PCPE  LL+LDW+      G ++ VL  M+ S L  D RTA KL FAQ L S                                     P    +  RN VA+ E+ RA  +G     +LYGGLH  DL  +L RG+       E AG RW +AWR+A   S  A+
Sbjct:  222 LRTPMWLVPCPEGALLMLDWS--LSERGRLSEVLGGMLESLLSLDLRTAGKLSFAQLLSSGNQRCEG------------------------------PQTVIIGERNRVALRELRRAIGEGVESTALLYGGLHGADLDEKL-RGM-----GFERAGHRWVSAWRIAVPSSDGAL 357          
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Match: A0A7S1E8V3_HEMAN (Hypothetical protein (Fragment) n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E8V3_HEMAN)

HSP 1 Score: 79.7 bits (195), Expect = 6.950e-12
Identity = 61/174 (35.06%), Postives = 77/174 (44.25%), Query Frame = 2
Query:  698 LRVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFRTARKLGFAQQLVSSQSVATAAGDGAGDXXXXXXXXXXXXXXXMAASTTLTPTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRLLRGVPGQLPALEPAGVRWETAWRVATVLSRSAV 1219
            LR  +WL PCPE  LL+LDW+      G ++ VL  M+ S L  D RTA KL FAQ L S                                     P    +  RN VA+ E+ RA  +G     +LYGGLH  DL  +L RG+       E AG RW +AWR+A   S  A+
Sbjct:  352 LRTPMWLVPCPEGALLMLDWS--LSERGRLSEVLGGMLESLLSLDLRTAGKLSFAQLLSSGNQRCEG------------------------------PQTVIIGERNRVALRELRRAIGEGVESTALLYGGLHGADLDEKL-RGM-----GFERAGHRWVSAWRIAVPSSDGAL 487          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5825.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A835ZAI6_9STRA1.960e-4343.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K168_9PHAE4.870e-4330.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF12_ECTSI2.080e-2932.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TQV4_9STRA1.230e-2026.58Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A6U9RMG6_9CHLO1.050e-1339.44Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A7S0VUI0_9CRYP1.710e-1337.93Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0KSU8_MICPS2.870e-1337.21Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
C1FJM4_MICCC2.650e-1236.36Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
A0A7S1ECB4_HEMAN4.490e-1235.06Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S1E8V3_HEMAN6.950e-1235.06Hypothetical protein (Fragment) n=3 Tax=Hemiselmis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5825contigP-wetherbeei_contig5825:707..3684 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog296587.XP_002509367.1
Model size1942
Max annot lvl33090|Viridiplantae
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.46e-13
EggNOG OGs28I0W@1|root,2QQBM@2759|Eukaryota,37QCD@33090|Viridiplantae
Cds size1500
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5825.1.1prot_P-wetherbeei_contig5825.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5825 945..3480 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186862.9939756-UTR-P-wetherbeei_contig5825:706..9441683186862.9939756-UTR-P-wetherbeei_contig5825:706..944Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5825 707..944 +
1683186863.0426905-UTR-P-wetherbeei_contig5825:3480..36841683186863.0426905-UTR-P-wetherbeei_contig5825:3480..3684Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5825 3481..3684 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186863.0033233-CDS-P-wetherbeei_contig5825:944..9771683186863.0033233-CDS-P-wetherbeei_contig5825:944..977Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5825 945..977 +
1683186863.0121477-CDS-P-wetherbeei_contig5825:1375..18831683186863.0121477-CDS-P-wetherbeei_contig5825:1375..1883Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5825 1376..1883 +
1683186863.021007-CDS-P-wetherbeei_contig5825:2323..25041683186863.021007-CDS-P-wetherbeei_contig5825:2323..2504Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5825 2324..2504 +
1683186863.0296705-CDS-P-wetherbeei_contig5825:2702..34801683186863.0296705-CDS-P-wetherbeei_contig5825:2702..3480Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5825 2703..3480 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5825.1.1

>prot_P-wetherbeei_contig5825.1.1 ID=prot_P-wetherbeei_contig5825.1.1|Name=mRNA_P-wetherbeei_contig5825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=500bp
MPVFEHINNRKVSLARSYGLCAQLECLDYARHPHWLLADLSREQARNPAA
ALNTGDCSYDGGSVGHGGGNRPDRRGSAASPASAAARAPVAAKDCATALR
MAPQPPPPLQPPQWLEQMREVAHTLAVGHRRGVGGRVLPQFFLQDGLNGA
ALLLRVALWLCPCPEADLLLLDWARAYPRAGGVTSVLPAMVASALRGDFR
TARKLGFAQQLVSSQSVATAAGDGAGDGGGGVSRGGGGDTRAMAASTTLT
PTEAAMQMRNAVAVAEVARAATDGCRRVGILYGGLHMRDLQRRLLRGVPG
QLPALEPAGVRWETAWRVATVLSRSAVPWQQQQQWRVGGNRNGSDAAAPK
IREAMASTVAEVEAMAAKIPREAREAAQAFGVAASEASDSAAAAAEAALS
PAELLYSHAPLALLAAAYVTIGAWDWADTISTMAAAAFGGSGGDDAAGTG
GGGFGGFGGGTAAGGGIEAVAAAALYVVRHAYMYYGLSKFLVQWDEKLF*
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mRNA from alignment at P-wetherbeei_contig5825:707..3684+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5825.1.1 ID=mRNA_P-wetherbeei_contig5825.1.1|Name=mRNA_P-wetherbeei_contig5825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2978bp|location=Sequence derived from alignment at P-wetherbeei_contig5825:707..3684+ (Phaeothamnion wetherbeei SAG_119_79)
AGCTGCTTACCGACGACGAAGCCGTCGTGATTGACGCAGAGGGCCGCCGC CGCGTGCGTCAAATGCTCTATCCCACGCTCGAACAGGTCGGGCCCCTTTC TTCTCAGGGGGGGAGGTGTTGGCTAACTACCGTTGATGCTCTGCGCTACT TTCTCTTCTTTTTGCGGTCTGTCCCTTGTAACGGGAAGGAAAGTGTTCAA GGGAGAAGCTGGCTGGCGATAGCGGCACAGCCTTTCCTATGCCGGTCTTC GAGCATATTAATAACAGAAAGGTGCAGCACAATGTTCCGGGCTTGGCTTG CAAGCAGCTTGCCAAAAATTTAGGGAGGGCGGTTGGTTTGATCCTCAGGA GGTCCTCGCTGAACTGCAACCTGTACGTTGTGTGCGTGCTGTAGCATACG GAATGATCCCCCCCCCCCCCCACTCTCTGCGTTCTTCTCTACCCCCCGCC CCCGGGTTCTTCCCGCCACCACACTCGCCNNNNNNNNNNTGCCACCTGCT GCTTGTGTTGTGTTTGGTTCATACGGAATTACCCCCCCCCCCCCCCCGAT GGAGCTTTCCTTCCGCAACTCCTGCTGCAGGGTTATGCCGCAACAACAGC AGCTGACACCTAAACTGCCCCACCATTCCATCATTACTACTGCCTACACT CCCTCGGCCCTGTGAGCAGGTTTCCCTGGCGCGCAGCTACGGCCTCTGCG CGCAGCTCGAGTGCCTCGACTACGCACGTCATCCGCACTGGCTGCTCGCC GATCTCTCCCGGGAGCAGGCCCGGAATCCCGCCGCCGCCTTAAATACCGG CGACTGCAGTTACGACGGCGGAAGTGTTGGCCACGGTGGTGGCAATCGCC CGGACCGGCGAGGGTCGGCGGCGTCGCCGGCGTCGGCAGCCGCAAGAGCA CCAGTGGCGGCAAAGGACTGTGCAACGGCGCTGAGAATGGCACCGCAACC GCCGCCACCGCTGCAACCGCCGCAATGGCTTGAGCAGATGCGGGAGGTGG CACATACGCTGGCGGTGGGCCACCGGCGCGGCGTCGGTGGGCGCGTACTG CCGCAGTTCTTCTTGCAGGACGGGCTGAACGGTGCGGCGCTGCTGCTGCG GGTGGCGCTGTGGCTGTGCCCGTGCCCCGAGGCAGACCTGCTGCTGCTCG ACTGGGCCCGCGCCTACCCGCGCGCCGGTGAGTCTCGTTGGCTGATGACT TCATGGCTGTCTTTGCGTTGGCCCGCATGTAGGCTTTGGCTTGCTTTGCA AGGTGGGTGTTGGCATGATTCGGCTTGCTTTCCGAATTATGCGCTGCGGT GTGTCTGGCTGATTTATGTTATTCTTTGTCATTTGAAAGTCGTCCTGCCT GTTGAACTCAGCTTGCATTTCCGAATGGCGCGGTTTCAAAAAAAGGGCAT TGTGTACATTGTCTGCTCTGAGGCGGCACCACGCGATGACGCTAAGGTTT CTAGGAGCGGAAAGGCTTATGCTATGAGGATTTACGTCCTCGCATCTTTT TTCTCGTTACTATCGTCGACTGCTGCTGGTTGGGGTCTGGCACATGCCTT AAACTGCCCGCATTGTTTTATATCAATGCTCAAAATCAATCCGACGCCCA TCGACCAAACCGACCAGGCGGCGTGACGTCGGTGCTGCCGGCGATGGTCG CCAGTGCCCTCCGTGGGGATTTCCGCACCGCCCGCAAGCTCGGCTTTGCG CAGCAGCTCGTTTCCAGCCAGAGTGTCGCCACCGCGGCTGGCGACGGCGC TGGCGATGGCGGCGGCGGTGTGAGTCGAGGCGGCGGCGGCGATACAAGGT GAGCATTGACTCCGTGACTTGCCGTGCCTTGGGGCGATGGCTTGCCTTGC TCTGCTTTTATATGAGTTCATGGTTCTATGCGTGTTCCGGCGTGTTATCC CGACGTGAAAGAGTTGCTGTTTGGTTCCTCTAAGCCCTGCCTGTGTCATG TGGGGAGGATTGCAAACCTTTTCTTTGCCAATCACTTTTCAAGCAGGGCA ATGGCGGCTTCAACGACGTTGACGCCGACCGAGGCGGCGATGCAGATGCG CAACGCCGTGGCGGTGGCAGAAGTCGCGCGCGCCGCCACCGACGGCTGCC GGCGCGTCGGAATCCTTTACGGCGGGCTCCACATGCGGGATCTACAGCGG CGGCTGCTGCGCGGCGTGCCGGGCCAGTTGCCCGCGCTGGAGCCGGCCGG CGTCCGGTGGGAGACCGCCTGGCGGGTGGCGACGGTGCTGTCTCGGTCCG CTGTACCGTGGCAGCAGCAGCAGCAGTGGCGCGTTGGCGGCAACCGCAAC GGAAGCGATGCAGCAGCTCCGAAAATACGAGAAGCGATGGCCTCGACGGT GGCAGAAGTGGAAGCCATGGCGGCGAAGATCCCGCGGGAGGCGAGGGAAG CGGCGCAGGCCTTTGGGGTGGCGGCGTCGGAAGCATCGGATTCCGCCGCC GCTGCCGCAGAAGCTGCGCTGTCGCCGGCAGAACTGCTCTACAGTCACGC CCCGCTGGCACTTTTAGCAGCGGCGTACGTCACTATCGGGGCCTGGGATT GGGCGGACACAATCTCAACGATGGCGGCGGCGGCATTCGGCGGTAGCGGC GGTGACGATGCGGCTGGCACAGGCGGTGGCGGTTTCGGCGGTTTCGGTGG CGGTACAGCGGCTGGCGGCGGGATTGAGGCCGTGGCGGCAGCAGCGCTGT ACGTGGTGCGGCATGCCTACATGTATTATGGGCTGTCAAAATTTCTGGTG CAGTGGGACGAAAAGCTCTTCTGAGGATTTCTTGGATTAGTGGGATGAGG AACTCTGAGGGTAGTTAATTATTTGGTAGAAGGTCTGATGATCTCGGATT GTTTCTCAGATCAGGCAGGGGGTAGTCTGGAGCGCGGTGAGAAAGTCGCC CTCTTGCCCTCTGGTAGGCAGGGTGGGAGGGGGACGGTTGGACATCAGAA AAAAGACTGTGTGGGGCCAGCCGGGAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5825:707..3684+

>mRNA_P-wetherbeei_contig5825.1.1 ID=mRNA_P-wetherbeei_contig5825.1.1|Name=mRNA_P-wetherbeei_contig5825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1500bp|location=Sequence derived from alignment at P-wetherbeei_contig5825:707..3684+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGTCTTCGAGCATATTAATAACAGAAAGGTTTCCCTGGCGCGCAG
CTACGGCCTCTGCGCGCAGCTCGAGTGCCTCGACTACGCACGTCATCCGC
ACTGGCTGCTCGCCGATCTCTCCCGGGAGCAGGCCCGGAATCCCGCCGCC
GCCTTAAATACCGGCGACTGCAGTTACGACGGCGGAAGTGTTGGCCACGG
TGGTGGCAATCGCCCGGACCGGCGAGGGTCGGCGGCGTCGCCGGCGTCGG
CAGCCGCAAGAGCACCAGTGGCGGCAAAGGACTGTGCAACGGCGCTGAGA
ATGGCACCGCAACCGCCGCCACCGCTGCAACCGCCGCAATGGCTTGAGCA
GATGCGGGAGGTGGCACATACGCTGGCGGTGGGCCACCGGCGCGGCGTCG
GTGGGCGCGTACTGCCGCAGTTCTTCTTGCAGGACGGGCTGAACGGTGCG
GCGCTGCTGCTGCGGGTGGCGCTGTGGCTGTGCCCGTGCCCCGAGGCAGA
CCTGCTGCTGCTCGACTGGGCCCGCGCCTACCCGCGCGCCGGCGGCGTGA
CGTCGGTGCTGCCGGCGATGGTCGCCAGTGCCCTCCGTGGGGATTTCCGC
ACCGCCCGCAAGCTCGGCTTTGCGCAGCAGCTCGTTTCCAGCCAGAGTGT
CGCCACCGCGGCTGGCGACGGCGCTGGCGATGGCGGCGGCGGTGTGAGTC
GAGGCGGCGGCGGCGATACAAGGGCAATGGCGGCTTCAACGACGTTGACG
CCGACCGAGGCGGCGATGCAGATGCGCAACGCCGTGGCGGTGGCAGAAGT
CGCGCGCGCCGCCACCGACGGCTGCCGGCGCGTCGGAATCCTTTACGGCG
GGCTCCACATGCGGGATCTACAGCGGCGGCTGCTGCGCGGCGTGCCGGGC
CAGTTGCCCGCGCTGGAGCCGGCCGGCGTCCGGTGGGAGACCGCCTGGCG
GGTGGCGACGGTGCTGTCTCGGTCCGCTGTACCGTGGCAGCAGCAGCAGC
AGTGGCGCGTTGGCGGCAACCGCAACGGAAGCGATGCAGCAGCTCCGAAA
ATACGAGAAGCGATGGCCTCGACGGTGGCAGAAGTGGAAGCCATGGCGGC
GAAGATCCCGCGGGAGGCGAGGGAAGCGGCGCAGGCCTTTGGGGTGGCGG
CGTCGGAAGCATCGGATTCCGCCGCCGCTGCCGCAGAAGCTGCGCTGTCG
CCGGCAGAACTGCTCTACAGTCACGCCCCGCTGGCACTTTTAGCAGCGGC
GTACGTCACTATCGGGGCCTGGGATTGGGCGGACACAATCTCAACGATGG
CGGCGGCGGCATTCGGCGGTAGCGGCGGTGACGATGCGGCTGGCACAGGC
GGTGGCGGTTTCGGCGGTTTCGGTGGCGGTACAGCGGCTGGCGGCGGGAT
TGAGGCCGTGGCGGCAGCAGCGCTGTACGTGGTGCGGCATGCCTACATGT
ATTATGGGCTGTCAAAATTTCTGGTGCAGTGGGACGAAAAGCTCTTCTGA
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