mRNA_P-wetherbeei_contig58149.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58149.1.1 vs. uniprot
Match: W7TZ53_9STRA (Lysine-specific demethylase 5d n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZ53_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.650e-17 Identity = 55/133 (41.35%), Postives = 82/133 (61.65%), Query Frame = 1
Query: 1 LQSKLDAAAAWLDRVRRAIPKASKPAGSAGXXXXGPEKAGLEEVRELLGAREQTGVLLEGKEVDAVAGVLETADDWLGRVRAALEGGS-EPTLMSLSALLDEAVGIPVAMEEYRVLQVGIKARNWKVRVKAGL 396
++ K++ A W+++VR+A+P+ +K +AG K R LL E G+ ++ KE+D +AGVL+TA+ WL RVR ALE + E L SL ALL EA IPV M+E+++L I+AR W +RV+ L
Sbjct: 686 IRGKVEQAHHWVEKVRKALPRKNKTRSNAGDAG----KVDYSAARTLLS--EGAGIRVDVKELDDIAGVLDTAETWLQRVREALEESTDEAGLQSLQALLCEADDIPVEMDEHKILAAEIEARRWGLRVQPRL 812
BLAST of mRNA_P-wetherbeei_contig58149.1.1 vs. uniprot
Match: D7FR56_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR56_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 4.280e-16 Identity = 45/96 (46.88%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 109 EKAGLEEVRELLGAREQTGVLLEGKEVDAVAGVLETADDWLGRVRAALEGGSEPTLMSLSALLDEAVGIPVAMEEYRVLQVGIKARNWKVRVKAGL 396
EK L V+ LL + TGV ++ KE ++E A++W+ RV+ LE G TL +L ALL EA GIPV MEE ++L VGIK+R W++RV A L
Sbjct: 387 EKVDLSHVKGLLSSSSTTGVEMDMKEFSHTNDLIENAEEWMTRVKDMLESGEPTTLQALEALLIEAEGIPVQMEEQQLLTVGIKSRQWRIRVDATL 482
BLAST of mRNA_P-wetherbeei_contig58149.1.1 vs. uniprot
Match: A0A7R9U4V9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4V9_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 6.650e-10 Identity = 42/124 (33.87%), Postives = 67/124 (54.03%), Query Frame = 1
Query: 1 LQSKLDAAAAWLDRVRRAIPKASKPAGSAGXXXXGPEKAGLEEVRELLGAREQTGVLLEGKEVDAVAGVLETADDWLGRVRAALEGGSEPTLMSLSALLDEAVGIPVAMEEYRVLQVGIKARNW 372
L+ KL A W+++VR+A+P S+ K L +V+ LL + GV L KE + G+++TA+DW+ RVR ++ G + L L+ LL E IPV ++E +L+ I +NW
Sbjct: 164 LEEKLRMAQEWVEKVRKAVPNRKA---SSRCDPHPVSKMDLTDVKGLLAEADTVGVEL--KETGGLRGLVDTAEDWVSRVRELIDFGGDADLDLLNELLSEGSSIPVKIDEVEILRHQILLQNW 282
BLAST of mRNA_P-wetherbeei_contig58149.1.1 vs. uniprot
Match: A0A8K1C3S4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3S4_PYTOL) HSP 1 Score: 65.5 bits (158), Expect = 9.140e-10 Identity = 43/125 (34.40%), Postives = 68/125 (54.40%), Query Frame = 1
Query: 4 QSKLDAAAAWLDRVRRAIPK--ASKPAGSAGXXXXGPEKAGLEEVRELLGAREQTGVLLEGKEVDAVAGVLETADDWLGRVRAALEGGSEPTLMSLSALLDEAVGIPVAMEEYRVLQVGIKARNW 372
Q+K+ A +WL +VR+ IPK S+ G P+K L +R L+ + EV + +LE AD+W +V+AA+EGG++ +L L L++E +PV M+E + L+ I AR W
Sbjct: 383 QNKMMTAQSWLAKVRKCIPKRRTSRRGGPE------PKKMDLNAIRALV----DDAPCEDSAEVFEMQDLLECADEWAEKVKAAIEGGADVSLEELKTLMEEGNEMPVDMDEQKYLEAEIAAREW 497
BLAST of mRNA_P-wetherbeei_contig58149.1.1 vs. uniprot
Match: A0A7S2R6X8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R6X8_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 9.860e-6 Identity = 38/132 (28.79%), Postives = 68/132 (51.52%), Query Frame = 1
Query: 1 LQSKLDAAAAWLDRVRRAIPKASKPAGSAGXXXXGPEKAGLEEVRELLGAREQTGVLLEGKEVDAVAGVLETADDWLGRVRAALEGGSEPTLMSLSALLDEAVGIPVAMEEYRVLQVGIKARNWKVRVKAGL 396
L L A + +++ +PK K G+ +K L +R L E + + +E+ + +++ DDW RV+ AL+ E L +LSALLDEA GIPV M++ ++L+ ++A+ + ++ L
Sbjct: 698 LDDHLKRAQECIAKMKNVVPKKQKTRGNTEV-----KKMELATLRVL--KDEAASIGIPSQEIQDMENLIKLGDDWSIRVKTALDNVDEVDLDTLSALLDEAGGIPVLMDQEKLLKYEVQAKECVLEIEEAL 822 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58149.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58149.1.1 >prot_P-wetherbeei_contig58149.1.1 ID=prot_P-wetherbeei_contig58149.1.1|Name=mRNA_P-wetherbeei_contig58149.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=132bp LQSKLDAAAAWLDRVRRAIPKASKPAGSAGGGGGGPEKAGLEEVRELLGAback to top mRNA from alignment at P-wetherbeei_contig58149:1..498- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58149.1.1 ID=mRNA_P-wetherbeei_contig58149.1.1|Name=mRNA_P-wetherbeei_contig58149.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig58149:1..498- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58149:1..498- >mRNA_P-wetherbeei_contig58149.1.1 ID=mRNA_P-wetherbeei_contig58149.1.1|Name=mRNA_P-wetherbeei_contig58149.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig58149:1..498- (Phaeothamnion wetherbeei SAG_119_79)back to top |