mRNA_P-wetherbeei_contig5801.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5801.1.1 vs. uniprot
Match: A0A6H5KS37_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KS37_9PHAE) HSP 1 Score: 205 bits (522), Expect = 1.820e-61 Identity = 116/165 (70.30%), Postives = 131/165 (79.39%), Query Frame = 1
Query: 1 ARSKPRWRSIFAQEALNRDAEARALATGTRPEYRLTFWGSMVAGAVSRSVAQTALHPANVIKTLLQTKGSFSAIMPLTWTTVSRGAGAQFLLSLPNGALHFAVLENTRVALAAVAGPAGQTASALLDFCSSAAATALCSVTSTPQMVLTNRIMAGVYPDLMTGVR 495
AR K R S+FA E +NR A+A A A G RP+Y+LTFWG MVAGA T+LHPANVIKTLLQTKGSF AI+PLTWTT+SRGAGAQFLLSLPNGALHFAVLENT+ +A + ++AS LLDF S + ATALCSV STPQMVLTNRIMAGVYP+L TGVR
Sbjct: 134 ARWKARHGSLFAHENVNRKAQAAARAAGMRPDYKLTFWGCMVAGA-------TSLHPANVIKTLLQTKGSFRAILPLTWTTLSRGAGAQFLLSLPNGALHFAVLENTKSRMAEMFPL--KSASFLLDFASCSVATALCSVMSTPQMVLTNRIMAGVYPNLWTGVR 289
BLAST of mRNA_P-wetherbeei_contig5801.1.1 vs. uniprot
Match: A0A835ZCC4_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC4_9STRA) HSP 1 Score: 153 bits (386), Expect = 9.620e-42 Identity = 85/155 (54.84%), Postives = 105/155 (67.74%), Query Frame = 1
Query: 28 IFAQEALNRDAEARALATGTRPEYRLTFWGSMVAGAVSRSVAQTALHPANVIKTLLQTKGSFSAIMPLTWTTVSRGAGAQFLLSLPNGALHFAVLENTRVALAAVAGPAGQTASALLDFCSSAAATALCSVTSTPQMVLTNRIMAGVYPDLMTGV 492
+FA+ N A +A TGTRP Y+LTFWG MVAGA+SRSVAQ ALHP NV+KTLLQTKGSF+A++PLT ++RGAGAQFLLS+P GA H+AVLE T+ A+ V V STP MVLT+RIMAG YP+L++G+
Sbjct: 76 LFAEREANELAIEKARLTGTRPAYKLTFWGCMVAGALSRSVAQVALHPFNVLKTLLQTKGSFAAVLPLTVADLTRGAGAQFLLSVPTGAFHYAVLEATKHAMTDVFPAXXXXXXXXXXXXXXXXXXXXXXVLSTPTMVLTSRIMAGSYPNLLSGI 230
BLAST of mRNA_P-wetherbeei_contig5801.1.1 vs. uniprot
Match: W7THW6_9STRA (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THW6_9STRA) HSP 1 Score: 143 bits (360), Expect = 4.180e-37 Identity = 84/136 (61.76%), Postives = 101/136 (74.26%), Query Frame = 1
Query: 103 LTFWGSMVAGAVSRSVAQTALHPANVIKTLLQTKGSFSAIMPLTWTTVSRGAGAQFLLSLPNGALHFAVLENTRVALAA-----VAGPAGQTASALLDFCSSAAATALCSVTSTPQMVLTNRIMAGVYPDLMTGVR 495
LTFWG+M+AGAVSRS AQTA+HPANV+KTLLQTKG+ + L ++RGAGAQF LSLP+GAL FAVLE T+ L++ AGPA DF SSA +T +CSV STPQMVLT+RIMAG YP+L+ GVR
Sbjct: 220 LTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGA-GELANLNVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNFAGPA-------FDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVR 347
BLAST of mRNA_P-wetherbeei_contig5801.1.1 vs. uniprot
Match: D7FP70_ECTSI (Mitochondrial energy transfer protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP70_ECTSI) HSP 1 Score: 123 bits (308), Expect = 4.610e-31 Identity = 71/133 (53.38%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 121 MVAGAVSRSVAQTALHPANVIKTLLQTKGSFSAIMPLTWTTVSRGAGAQFLLSLPNGALHFAVLENTRVALAAV--------AGPAGQTASALLDFCSSAAATALCSVTSTPQMVLTNRIMAGVYPDLMTGVR 495
M AGAVSRS+AQT + PANV+KTLLQ +G+ S + L++ ++RGAGAQF++SLP+GA ++A LE A + AGP +LDF SS+ AT +CSV STPQMVLT+RIMAG+YP+L +GVR
Sbjct: 1 MFAGAVSRSIAQTCMQPANVVKTLLQGRGTASQLSNLSFKLLTRGAGAQFVMSLPHGAFNYATLEVILGCSAKIFPDEWRERAGP-------VLDFLSSSVATVVCSVVSTPQMVLTDRIMAGIYPNLASGVR 126
BLAST of mRNA_P-wetherbeei_contig5801.1.1 vs. uniprot
Match: A0A6H5JLA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA3_9PHAE) HSP 1 Score: 126 bits (317), Expect = 9.670e-31 Identity = 72/139 (51.80%), Postives = 98/139 (70.50%), Query Frame = 1
Query: 103 LTFWGSMVAGAVSRSVAQTALHPANVIKTLLQTKGSFSAIMPLTWTTVSRGAGAQFLLSLPNGALHFAVLENTRVALAAV--------AGPAGQTASALLDFCSSAAATALCSVTSTPQMVLTNRIMAGVYPDLMTGVR 495
LTF +M AGA+SRS+AQT + PANV+KTLLQ +G+ S + L++ ++RGAGAQF++S+P+GA ++A LE A + AGP +LDF SS+ AT +CSV STPQMVLT+RIMAG+YP+L +GVR
Sbjct: 356 LTFTEAMFAGAISRSIAQTCMQPANVVKTLLQGRGTASQLSNLSFKLLTRGAGAQFVMSVPHGAFNYATLEVILGCSAKIFPDEWRERAGP-------VLDFLSSSVATVVCSVVSTPQMVLTDRIMAGIYPNLASGVR 487
BLAST of mRNA_P-wetherbeei_contig5801.1.1 vs. uniprot
Match: A0A7S1BNE3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNE3_9STRA) HSP 1 Score: 122 bits (306), Expect = 5.930e-30 Identity = 72/151 (47.68%), Postives = 94/151 (62.25%), Query Frame = 1
Query: 100 RLTFWGSMVAGAVSRSVAQTALHPANVIKTLLQTKGSFSA-----------------IMPLTWTTVSRGAGAQFLLSLPNGALHFAVLENTRVALAAVAGPAGQTASAL---LDFCSSAAATALCSVTSTPQMVLTNRIMAGVYPDLMTGV 492
+L FW +M+ GAVSRSVAQT +HPAN +KT+LQ++G A + P + RGAGAQ LLSLP+GAL+FAVLE TR AL + G + A+ + LDF SS AT CSV STPQM++T+ IMAG YP++ +
Sbjct: 117 KLCFWETMICGAVSRSVAQTIMHPANTMKTILQSRGGPDAASQFGLEAGRCLIPRDFLRPPVLRVLKRGAGAQLLLSLPHGALNFAVLETTRRALGKMVGEGMKNATRVGPGLDFLSSGIATVCCSVVSTPQMMITDNIMAGTYPNMAKAI 267
BLAST of mRNA_P-wetherbeei_contig5801.1.1 vs. uniprot
Match: A0A7S4D7A1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7A1_HETAK) HSP 1 Score: 121 bits (304), Expect = 7.520e-30 Identity = 66/130 (50.77%), Postives = 90/130 (69.23%), Query Frame = 1
Query: 103 LTFWGSMVAGAVSRSVAQTALHPANVIKTLLQTKGSFSAIMPLTWTTVSRGAGAQFLLSLPNGALHFAVLENTRVALAAVAGPAGQTASALLDFCSSAAATALCSVTSTPQMVLTNRIMAGVYPDLMTGV 492
+T+ M+AGAVSRSVAQT + P NV+KTL Q G+ + +++ ++RGAGAQFLLS+P+GA+ FAV+E T+ L + AG A L DF +S +T +CSV STPQMV+T+R+MAG YP L V
Sbjct: 85 MTWTEHMIAGAVSRSVAQTMMQPFNVMKTLKQAHGTADQLKQMSFKLLTRGAGAQFLLSMPHGAIAFAVVEQTKKTLTNLVPNAGWAAGPLFDFMASTVSTTICSVVSTPQMVITDRLMAGRYPHLGAAV 214
BLAST of mRNA_P-wetherbeei_contig5801.1.1 vs. uniprot
Match: K0TM79_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TM79_THAOC) HSP 1 Score: 121 bits (303), Expect = 1.370e-29 Identity = 80/178 (44.94%), Postives = 107/178 (60.11%), Query Frame = 1
Query: 13 PRW----RSIFAQEALNRDAEARALATGTRPEYRLTFWGSMVAGAVSRSVAQTALHPANVIKTLLQTKGSFSAIMPLTWTT---------VSRGAGAQFLLSLPNGALHFAVLENTR------VALAAVAGPAGQTASALLDFCSSAAATALCSVTSTPQMVLTNRIMAGVYPDLMTG 489
PRW R I Q+ D+ +R A+ E +L FW +MV GA+SRS AQT +HPANV+KT+LQ+K + PLT + +SRGAGAQ LLSLP+GA++FAVLE R V+ + A + A +DF SSA +T CSV STPQM++ + IMAG YP+L +
Sbjct: 61 PRWPRRGRRIRKQQCAPVDSVSRGGASAVT-ERKLAFWEAMVCGAISRSTAQTIMHPANVMKTILQSKRTIPGQAPLTVASFTQWRYAQKLSRGAGAQLLLSLPHGAVNFAVLEFVRRQMHGLVSKSPYAEQINRNFGAGMDFLSSAISTVCCSVVSTPQMMICDNIMAGTYPNLASA 237
BLAST of mRNA_P-wetherbeei_contig5801.1.1 vs. uniprot
Match: A0A835Z5P9_9STRA (Mitochondrial energy transfer protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P9_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.850e-29 Identity = 65/125 (52.00%), Postives = 90/125 (72.00%), Query Frame = 1
Query: 121 MVAGAVSRSVAQTALHPANVIKTLLQTKGSFSAIMPLTWTTVSRGAGAQFLLSLPNGALHFAVLENTRVALAAVAGPAGQTASALLDFCSSAAATALCSVTSTPQMVLTNRIMAGVYPDLMTGVR 495
M AGA+SR++AQTA+ PANV+KTLLQ + + + L++ ++RGAGAQFLLSLP+GA +FA LE + ++ PA +LDF SS AT +CS+ STPQMV+T+RIMA +YP+L + VR
Sbjct: 1 MFAGALSRAIAQTAMQPANVVKTLLQGRSTSGQLKHLSFKLLTRGAGAQFLLSLPHGAFNFATLEAVKEYTSSFL-PAAGAMGPVLDFFSSTVATTICSIISTPQMVITDRIMADIYPNLASAVR 124
BLAST of mRNA_P-wetherbeei_contig5801.1.1 vs. uniprot
Match: A0A0G4H4F1_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H4F1_VITBC) HSP 1 Score: 118 bits (296), Expect = 1.670e-28 Identity = 73/142 (51.41%), Postives = 96/142 (67.61%), Query Frame = 1
Query: 100 RLTFWGSMVAGAVSRSVAQTALHPANVIKTLLQTK------GSFSAIMPLTWTTVSRGAGAQFLLSLPNGALHFAVL-----ENTRVALAAVAGPAGQTASALLDFCSSAAATALCSVTSTPQMVLTNRIMAGVYPDLMTGV 492
+LTFWG+M+AGA+SRSVAQTA+HP +KTLLQ + G F + W RGAGAQFL+SLP+GA++FAVL + TR+ AG + DFCS A+AT LCSV STPQMVL +RI+ G+YP+L++G+
Sbjct: 113 KLTFWGNMLAGALSRSVAQTAVHPLIGVKTLLQGRNTWQGWGYFLGHPGIWW----RGAGAQFLISLPHGAMNFAVLGFMKHQMTRLMPIKQAG-------FVFDFCSQASATFLCSVISTPQMVLVDRIVTGIYPNLVSGL 243 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5801.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5801.1.1 >prot_P-wetherbeei_contig5801.1.1 ID=prot_P-wetherbeei_contig5801.1.1|Name=mRNA_P-wetherbeei_contig5801.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp ARSKPRWRSIFAQEALNRDAEARALATGTRPEYRLTFWGSMVAGAVSRSVback to top mRNA from alignment at P-wetherbeei_contig5801:43..688- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5801.1.1 ID=mRNA_P-wetherbeei_contig5801.1.1|Name=mRNA_P-wetherbeei_contig5801.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=646bp|location=Sequence derived from alignment at P-wetherbeei_contig5801:43..688- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5801:43..688- >mRNA_P-wetherbeei_contig5801.1.1 ID=mRNA_P-wetherbeei_contig5801.1.1|Name=mRNA_P-wetherbeei_contig5801.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig5801:43..688- (Phaeothamnion wetherbeei SAG_119_79)back to top |