mRNA_P-wetherbeei_contig5797.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5797.1.1
Unique NamemRNA_P-wetherbeei_contig5797.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: D7FQJ6_ECTSI (Early-responsive to dehydration protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQJ6_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 1.180e-105
Identity = 172/303 (56.77%), Postives = 219/303 (72.28%), Query Frame = 1
Query:    1 RYENASAFRQTEWVDLDTVTLTLIANMMVALLCLFYFWSLRRHSPEYFSHKRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQGGLRTSEHVQTTINTFNQLSMSNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLERCLAHRRVRGEEQFHRLGTLCMCGCGERVNSIEFYEAQLQQLNDAVRREQRRR 909
            +YENAS F QTEWVD+DT+++ L  N+++ LL L +FWS RRH P YFS KR  LP  TPPDLP +GF  W+  L+A  E +IL YAGFDA I LRFY +AFKVFA+F+ YGL V++P NV      S   QT INTFN+LSMSN+QHY+  MW+HA G++LLSA+ MY+L VEY++YT+LRH +LRRK+AHLRTIVV+GVP  MR+ SKLF YFNTLYP +VV VH PQ+L  LR L+  R+  +  L + LA + VRGEEQ+H  G LC     +RVN++ F   QL +LN A+  EQ +R
Sbjct:   35 KYENASVFHQTEWVDVDTISINLAGNVVIFLLALTFFWSSRRHYPSYFSSKRYYLPDQTPPDLPSSGFLSWIMPLMAFPEDDILTYAGFDAAIFLRFYAVAFKVFALFAPYGLLVLIPVNVMETPSDSNQAQTNINTFNRLSMSNVQHYNPCMWLHALGIYLLSALAMYFLVVEYRYYTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSRLRGLIRERQAVLENLGKGLAEKGVRGEEQYHYTGVLCYRR--KRVNTVGFCSTQLDRLNLAIATEQDQR 335          
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: A0A836CHQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ4_9STRA)

HSP 1 Score: 270 bits (689), Expect = 1.690e-79
Identity = 155/329 (47.11%), Postives = 196/329 (59.57%), Query Frame = 1
Query:   13 ASAFRQTEWVDLDTVTLTLIANMMVALLCLFYFWSLRRHSPEYFSHKR-RKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQGGLRTSEHVQTTINTFNQLSMSNIQHYDSK-----------------------------MWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLERCLAHRRVRGEEQFHRLGTLCMCGCGERVNSIEFYEAQLQQLNDAVRREQRRR 909
            +SAF QTEWV+  T+++T   N  VA++CLF+FWS+R+H+  YFS KR R  PGS PPDLP  GF  W+  L+ MRE E+L YAGFD +I LRFYKLAFKVF IF++YGLAVI+P N+ GG R S  VQT+IN+FNQLSMSNIQHYDSK                             MWVHA G++LL+A+  Y+L+VE++FY  LRHEYL R+A HLRTIVVE                                          R++ +ARLER +A +R+ G E  HRLG   +CG G  VNSI+ Y+ QL  LN  +  EQ R+
Sbjct:   45 SSAFGQTEWVEWSTISITAAMNAAVAVICLFFFWSMRQHNAGYFSLKRGRAPPGSVPPDLPT-GFVDWMGPLMGMREQEVLRYAGFDTLIFLRFYKLAFKVFGIFALYGLAVIIPANIAGGQRNSFRVQTSINSFNQLSMSNIQHYDSKASALCIRRTSALKLAIVTEHCSSRLAELQMWVHAFGVYLLTALVQYFLYVEFRFYKQLRHEYLMRRAPHLRTIVVEE-----------------------------------------RQRVLARLERLMALKRITGAEPHHRLG---VCGFGPNVNSIQVYKQQLTTLNMTISSEQARK 328          
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: A0A7S3UXJ8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXJ8_HETAK)

HSP 1 Score: 215 bits (548), Expect = 8.870e-64
Identity = 126/302 (41.72%), Postives = 184/302 (60.93%), Query Frame = 1
Query:   10 NASAFRQTEWVDLDTVTLTLIANMMVALLCLFYFWSLRRHS--PEYFSHKRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQGGLRTSEHVQTTINTFNQLSMSNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLERCLAHRRVRGEEQFHRLGTLCMCGCGERVNSIEFYEAQLQQLNDAVRREQRRR 909
            ++SA+ Q+E +DLDT+ LT + N +  L  L  F  LR+ +  P  FS +R  LP  TPPDLP +  F W+   +A    EIL YAG DA++ +RF+ L  ++F IF+VYGL V++P N  G    S   Q+  NT   L++SNI    + MW H  G++LL+A+TM+ L VE++ YT LRHE+LRR+ A  R+++VE VP  +R+ + L AYF  LYP  VV V   Q L+ L RL+E RE  +A+LE  + H++  G+       T    G G +  ++ +++A+L +LND V REQ RR
Sbjct:    3 DSSAYDQSENLDLDTIGLTFLLNGLAGLTFLVIFGKLRQRTTHPYSFSTRRLHLPKQTPPDLPKSSIFSWVMPCMAFNFDEILYYAGLDALMYIRFHWLGLRIFGIFAVYGLCVLIPVNALG----SNGEQSLFNT---LTLSNIADGSNTMWFHVVGMYLLTAITMWQLVVEFRTYTRLRHEFLRRRRALFRSVLVEEVPRPLRSQATLRAYFEKLYPGQVVEVFLCQRLEALTRLIEQRESVLAKLEHAMVHQQRFGKT------TYVWRGWGHKEEAVTYWQARLHELNDEVSREQARR 291          
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: A0A1Z5JV61_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JV61_FISSO)

HSP 1 Score: 160 bits (404), Expect = 2.770e-40
Identity = 103/318 (32.39%), Postives = 170/318 (53.46%), Query Frame = 1
Query:    4 YENASAFRQTE--WVDLDTVTLTLIANMMVALLCLFYFWSLRRHSPEYFSHKRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQGGLRTSEHV-QTTINTFNQLSMSNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLER-----CLAHRRVRGEEQFHR--LGTL------CMCGCGERVNSIEFYEAQLQQLNDAVRREQRRR 909
            Y + S++R T   +  L  + LTL A  ++ L C   F+  ++ SP + S +R +LP   PP LPV G+F W+R +L + + EI+   G+D++I LRF++LA +     S++   V++P N  G      HV +  +  F + +M+N+     ++WVH    +LL+ + +  L VEY+ + S+RH YL  +  HLRT++V  +P  +R+P K+  YF  +YP+ V  V   Q+   L RL++ R   +A LE      C   ++   E    +  L TL      C    G +   +  Y +QL++LN+ + REQRRR
Sbjct:   78 YISESSYRATSMTFATLLVLYLTLSAVFLIFLSC---FYHSQKTSPLFISPRRHRLPKLVPPPLPVEGYFSWVRVMLFLSDEEIINRIGYDSLIFLRFHRLALRCIVKMSLFSFVVLLPLNYTGSNVLDLHVGKILVTDFMRFTMANVSAGSPRLWVHCFAAYLLTGIVVRELLVEYETFNSIRHLYLLNREPHLRTVLVTNIPRHLRSPKKITNYFKHVYPDAVRSVFMCQNCTDLERLVQQRTAILASLEHELLLLCRNEKKKLYEPSMWKKFLATLPSRLEECGVAEGTQERLVRLY-SQLEELNNEIEREQRRR 391          
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: A0A7S3QEH8_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QEH8_9STRA)

HSP 1 Score: 150 bits (380), Expect = 4.320e-37
Identity = 85/255 (33.33%), Postives = 144/255 (56.47%), Query Frame = 1
Query:   10 NASAFRQTEWVDLDTVTLTLIANMMVALLCLFY--FWSLRRHSPEYFSHKRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQGGLRTSE-----HVQTTINT-FNQLSMSNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLE 750
            + SAFR+T    +   TL ++  +M  ++ +F   F+  ++ SP + S +R +LP   PP LPV G F W++    M + EI+   GFDA+I +RF++LA +     S++   V++P N  GG   +      +V + + T F + SM+N++    ++WVH    +LLS + M  L VEY  + ++RH Y+  K  HLRT++V  +P  +R+P K+  YF  +YPN V  V   Q+L HL +++  R + + ++E
Sbjct:  106 DVSAFRET---SMSFATLVMLFTIMTCVVIVFLSCFYHNQKTSPLFASPRRHRLPRLVPPPLPVDGTFSWIKVCFYMSDEEIINRVGFDALIFIRFHRLALRCILKMSIFSFLVLLPLNFTGGGHANASDLKGYVGSLLFTDFLRFSMANVEGGSPRLWVHCFAAYLLSGIVMRELVVEYNAFNNIRHRYMLSKEPHLRTVLVSNIPRHLRSPKKIRNYFKHVYPNAVKNVTMCQNLIHLEKMVARRTKILNKIE 357          
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: A0A7S2LNL3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LNL3_9STRA)

HSP 1 Score: 149 bits (376), Expect = 4.400e-37
Identity = 95/309 (30.74%), Postives = 169/309 (54.69%), Query Frame = 1
Query:   52 TVTLTLIANMMVALLCLFYFWSLRRHSPEYFSHKRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQGGLRTSE-----HVQTTINT-FNQLSMSNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLER-----CLAHRR--VRGEEQFHRLGT-LCMCGCGERVNSIEFYEAQ---------LQQLNDAVRREQRRR 909
            T+++ L    +++L+ L  F+  ++ +P + S +R +LP   PP LPV G F W++  L + + EI++  GFDA+I LRF++LA +     SV+   V++P N  GG R        +V + + T F + +M+N+    +++WVH    +LL+ + +  L +EY  Y+S+RH YL  K  HLRT++V  +P  +R+P K+  YF  +YP  V  V   Q+L +L +++  R   +A++E+     C   +R  +      H + T +  C   E++  ++  EAQ         L+++N ++ +EQ RR
Sbjct:  118 TLSMMLFIMSIISLVFLSCFYHNQKTAPLFVSPRRHRLPKLVPPPLPVDGPFSWVKVCLFISDEEIIKRVGFDALIFLRFHRLALRCIVKMSVFSFLVLLPLNFTGGGRAKANDLKGYVDSLLFTDFLRFTMANVSSGSNRLWVHCFAAYLLTTIVVRELLIEYNAYSSIRHRYLLSKEPHLRTVLVSNIPRHLRSPRKIGNYFRHVYPEAVKSVTICQNLINLEKMVAERTAVLAQIEKELLILCRTEKRKLLADTRLAHHISTAVWSCHLCEKIGVLD--EAQERISKLYVRLEEMNKSIEKEQLRR 424          
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: A0A7S2K0D2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K0D2_9STRA)

HSP 1 Score: 144 bits (363), Expect = 9.480e-37
Identity = 87/290 (30.00%), Postives = 151/290 (52.07%), Query Frame = 1
Query:  109 FWSLRRHSPEYFSHKRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQG-GLRTSEHV-----QTTINTFNQLSMSNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLER-----CLAHRR---VRGEEQFHRLG---------TLCMCGCGERVNSIEFYEAQLQQLNDAVRREQRRR 909
            F+  ++ SP + S +R +LP   PP LPV G F W+R +L + + EI+   G+DA+I LRF++LA +     S +   V++P N  G G + ++       +     F + +M+N+     ++WVH   ++LL+ + +  L VEY  + ++RH YL  + AHLRT++V  +P  +R PSK+  YF  +YP  V  V   Q+L  L +L++ R   +  +E+     C + +R   +     F R+           L   GC +    + +  ++L++LND + +E  RR
Sbjct:    6 FYHNQKTSPLFISPRRHRLPKLVPPALPVNGTFSWVRVVLFLSDEEIIHRIGYDALIFLRFHRLALRCIVKMSFFSFLVVLPLNFTGDGHKMNDGEGYGMGELLFTDFMRFTMANVSGGSPRLWVHCFAIYLLTGIVVRELLVEYNAFNNIRHRYLLSREAHLRTVLVTNIPRHLRAPSKITTYFKNVYPEAVKSVTICQNLIRLEKLVQKRTHILTAIEKELLVLCRSEKRKLVITTLSAFDRVKFTVTNLPKKLLSCVGCSDGQERLAWLYSKLEELNDGIEKEHVRR 295          
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: A0A7S1B8V0_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8V0_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.080e-34
Identity = 100/316 (31.65%), Postives = 163/316 (51.58%), Query Frame = 1
Query:   31 TEWVDLDTVTLTLIANMMVALLCLFY--FWSLRRHSPEYFSHKRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQGGLR-TSEHVQTTINT-----FNQLSMSNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLER-----CLAHRR-VRGEEQFHRLGTL-CMCGCGERVNSIEF--------YEAQLQQLNDAVRREQRRR 909
            T    +   TL ++  ++  LL  F   F+  ++ SP + S +R +LP   PP LPV G F W+     M + EI+   G+DA+I LRF++LA +     SV+   VI+P N  GG   T  +V+  +       F + +M+ +     ++WVH    +LL+ + +  L VEY  + ++RH YL  + +HLRT++V  +P  MR PSK+  YF  +YP  V  V   Q+L  L  L++ R+  ++++ER     CL  +R + G   F RL  + C     + +N I+         YE +L++ N  +R E +RR
Sbjct:  166 TRDTSMSFATLAMLYALLSCLLFTFLSCFYHNQKTSPLFISPRRHRLPKLVPPPLPVDGPFRWISVCALMSDEEIINRVGYDALIFLRFHRLALRCIIKMSVFSFFVILPLNFTGGENNTDSNVKEYMGKLFFTDFMKFTMAYVSFGSPRLWVHCVAAYLLTGIVVRELLVEYNAFNNIRHRYLLSRESHLRTVLVTNIPRHMRAPSKITNYFKHVYPEAVKSVTVCQNLIKLEYLVKKRKTVISKIERELLKLCLQEKRKLVGLNIFERLAQIFCTTFVCQWLNCIDSAHERLANQYE-RLEEFNRDIRNEMKRR 480          
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: A0A835Z3W6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W6_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.550e-34
Identity = 88/208 (42.31%), Postives = 122/208 (58.65%), Query Frame = 1
Query:  292 YKLAFKVFAIFSVYGLAVIVPTNVQGGLRTSEHVQTTINTFNQLSMSNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLERCLAHRRVRG-----EEQFHRLGTLCMCGCGERVNSIEFYEAQLQQLNDAVRREQ 900
            Y LA K+ A  +VY L V++P NV G   T E  + + N+F+ LSMSN+    + +WVHA G  L++    ++L  E+  YT LRH YL+ +A H+RTI++E VP+ MR  ++++ YFN LYPN +  V   QDL+ LRRLLE RE T+ARLER L  RR R      E        L  C   ERV +  + + +L  LN A+  EQ
Sbjct:    2 YLLAAKISAATAVYALCVVLPVNVVGDNLTDE--EASANSFSLLSMSNVAPGSATLWVHAVGTLLMTIAAFFFLNGEFTTYTRLRHAYLKMRAPHMRTILLEDVPAEMRGAAQIYIYFNHLYPNSIASVACMQDLRPLRRLLEQRESTLARLERLLL-RRARAAPNAAEPTMWTGPALAPCASCERVEAASWLQQRLDALNAAIGVEQ 206          
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: K0R9G4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R9G4_THAOC)

HSP 1 Score: 140 bits (353), Expect = 1.240e-33
Identity = 83/253 (32.81%), Postives = 132/253 (52.17%), Query Frame = 1
Query:   52 TVTLTLIANMMVALLCLFYFWSLRRHSPEYFSHKRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQGGLR---------------TSEHVQTTINTFNQLSM----SNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLER 753
            T+ +  I   ++ L+ L  F+  ++ SP + S +R +LP   PP LPV G F W+R  L M + EIL   GFDA+I LRF++LA +     S++   V++P N  GG R               T E  Q     +   ++      + H  +++WVH    +LL+ + +  L +EY  Y+S+RH YL  K  HLRT++V  +P  +R+P K+  YF  +YP  V  V   Q+L +L  L+  R   +A++E+
Sbjct:   80 TLAVMYIIMALILLVFLSCFYHNQKTSPLFVSPRRHRLPKLVPPPLPVDGAFSWVRVCLFMSDEEILSRVGFDALIFLRFHRLALRCIVKMSIFSFIVLLPLNFTGGGRAKAEDLKGYFDSLLFTGEKTQLLCRVYPLPTLVARLHEVYHGSNRLWVHCFAAYLLTIIVVRELLLEYNAYSSIRHRYLLSKEPHLRTVLVSNIPRHLRSPRKIGLYFRHVYPEAVKSVTICQNLLNLETLVAERTGVLAQIEK 332          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQJ6_ECTSI1.180e-10556.77Early-responsive to dehydration protein-related n=... [more]
A0A836CHQ4_9STRA1.690e-7947.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3UXJ8_HETAK8.870e-6441.72Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1Z5JV61_FISSO2.770e-4032.39Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3QEH8_9STRA4.320e-3733.33Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S2LNL3_9STRA4.400e-3730.74Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S2K0D2_9STRA9.480e-3730.00Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S1B8V0_9STRA1.080e-3431.65Hypothetical protein n=3 Tax=Corethron hystrix Tax... [more]
A0A835Z3W6_9STRA1.550e-3442.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K0R9G4_THAOC1.240e-3332.81Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5797contigP-wetherbeei_contig5797:147..2771 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FQJ6
PFAMsPHM7_cyt,RSN1_7TM,RSN1_TM
Model size927
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal anchor
Exons6
Evalue1.94e-106
EggNOG OGsCOG5594@1|root,KOG1134@2759|Eukaryota
Descriptionion transport
Cds size927
COG categoryI
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5797.1.1prot_P-wetherbeei_contig5797.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5797 147..2771 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186859.1265585-CDS-P-wetherbeei_contig5797:146..2621683186859.1265585-CDS-P-wetherbeei_contig5797:146..262Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5797 147..262 -
1683186859.1357303-CDS-P-wetherbeei_contig5797:593..7141683186859.1357303-CDS-P-wetherbeei_contig5797:593..714Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5797 594..714 -
1683186859.14348-CDS-P-wetherbeei_contig5797:895..10401683186859.14348-CDS-P-wetherbeei_contig5797:895..1040Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5797 896..1040 -
1683186859.1513996-CDS-P-wetherbeei_contig5797:1447..16831683186859.1513996-CDS-P-wetherbeei_contig5797:1447..1683Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5797 1448..1683 -
1683186859.1592166-CDS-P-wetherbeei_contig5797:2269..24971683186859.1592166-CDS-P-wetherbeei_contig5797:2269..2497Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5797 2270..2497 -
1683186859.1699507-CDS-P-wetherbeei_contig5797:2690..27711683186859.1699507-CDS-P-wetherbeei_contig5797:2690..2771Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5797 2691..2771 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5797.1.1

>prot_P-wetherbeei_contig5797.1.1 ID=prot_P-wetherbeei_contig5797.1.1|Name=mRNA_P-wetherbeei_contig5797.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=309bp
RYENASAFRQTEWVDLDTVTLTLIANMMVALLCLFYFWSLRRHSPEYFSH
KRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKL
AFKVFAIFSVYGLAVIVPTNVQGGLRTSEHVQTTINTFNQLSMSNIQHYD
SKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEG
VPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLE
RCLAHRRVRGEEQFHRLGTLCMCGCGERVNSIEFYEAQLQQLNDAVRREQ
RRRHTHTHR
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mRNA from alignment at P-wetherbeei_contig5797:147..2771-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5797.1.1 ID=mRNA_P-wetherbeei_contig5797.1.1|Name=mRNA_P-wetherbeei_contig5797.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2625bp|location=Sequence derived from alignment at P-wetherbeei_contig5797:147..2771- (Phaeothamnion wetherbeei SAG_119_79)
AGGTACGAGAACGCTTCAGCTTTCCGCCAGACAGAATGGGTGGACCTCGA TACGGTTACGCTCACCCTCATCGCCAACATGGTGCGTGAAGGTTATGCGC AATGTGAAATTGCTCGCTGTTAAGGCGTCCCTAGCATCGCTCCGTTATAC CAGCACATCGCGTCACCTTCGCATGGCATCGCCCGGTGTTGTCACGTCCA TCGCTCTAATGCACCCTTTCTTTGCCGTTTTAACCTGGGAAACTTCATGG CCCGGGCCGGCGATTGCCATGCAGATGGTGGCGCTTCTGTGCCTCTTTTA CTTCTGGTCGCTCCGGCGCCACAGCCCGGAGTACTTTTCCCACAAGCGGC GCAAGCTGCCGGGGAGCACCCCACCGGACTTGCCTGTCGCCGGATTCTTT GGCTGGCTGCGCCAGCTGCTGGCCATGCGGGAGGCGGAGATCCTCGAGTA CGCCGGCTTCGACGCCGTCATCCTCCTTCGATTTTACAAGCTGGCATTTA AGGTGCGCGCCGCTGTTCAAACCGTCCATTGTGAGGGCTTTGGGGAGGGG CCGGCTGCCGGTTCCGGGTTGTCCACAGTTAGAACACAGTGTGAGTCACC GTTACCCGGGCTGCCAATTTTTTTGCCGTGCACCCTTTATCGCCCTTGAA TAGCGCGCGCTGCTTCTTGTATATAAGAGAGCAAGCTCCAGTTCCTCTCC AAACACCTACATACAGTGAAATGACGGCGAAAAAATCGAGACGCCAATTC AGCATTTTGGAATCTATCGCTTGCGCCAATGAGCAGCCAACCAATTTGTA TGAAAGAGCAGAAAGAACTGCACGATTCCTTCCCGAGTTCCGTGTCAAAA TCGGGCCAGGCGTTCAACAAGAATTGCTGTTATGGCGTCCTGGCTTTCGG TGTATTTGCTGGTGCTTGCTTCTCGTTGCCGACGGTACCGAAATCCGACA CGGACCCGCCTAATTGCTGCGCCGCACTGCCTGCCTGACTCGCCGTGCCC TCGCTCTGCCACTGCCGCCCGCCGCTCGCCGCCGCTTCTCGCCGCCCCCC TCGCCGCCGCCGCCGCTGTCCTCTTCGCTGAGGAACAGGTGTTTGCCATC TTCTCGGTGTACGGGCTGGCGGTGATCGTGCCGACAAACGTGCAAGGCGG GTTGCGCACGTCAGAGCACGTCCAGACGACCATCAACACCTTCAACCAGC TTAGTATGTCGAACATCCAGCACTATGACAGTAAGATGTGGGTGCACGCC GCGGGGCTCTGGCTGCTCAGCGCCGTCACCATGTACTACCTCTTCGTTGA GTACCAGTTCTACACCAGCCTCAGGTAGATATCGGCGGTTTTTAGGATGG CGGCGGGTTCGGTTTTCGGTTTCGGTGGGTACGGTGGTTTTAGTGGTGAC GGCGGCGCTGGTTGCCAAAGCGTTGATGGCGGCGGCAATTGTATCAGCGA TGTTGGTGATGGCGGATTAGAGGAGCTGCTTTTCCTCTTGAGAAGTGGTG TATCGACTGGGTCTGGACCAGACGCGTATGGCGGCAAAACTCTCAAAGGA CGTCCTTGGACAGAGATTTCATAGTTCATTCTTCGGTTGGAAGCTGATTC TTCCGTTCTCCGCTTTTCCGCACCGCTGACTGGCGCAGAAGTGAAGTCGT CTGCCGCCATCTAGTAGGCCATCTCACACTTCCTTATTTGACGCTGCAAC TCCATGCTGATACTTGTGCAAATCCTGGCAGGCACGAGTACCTGCGGCGC AAGGCAGCACACCTGCGGACCATCGTGGTGGAGGGCGTCCCCTCCAGCAT GCGGACCCCCAGCAAGCTCTTCGCCTACTTCAACACGCTCTACCCCAACG ACGTCGTGTGCGTGCACGCCCCGCAGGTCAGAGAGAGGAGCAGAAGAGCA GTAGGCTAGGCAAAGGGATCCTTTTTTGTTTTGTTTGAAGAATGTTCTAG GTTGATCCGGTCGCTTTTCTCGCAGCAGCAACTTAGCAGTGTGTTTGTTT TATCTTTTGCTAAGAAGGTACCCCCTTGTCGTGTGGCGTCGTCTGCCGCG GCCGCAGGATTTGAAGCACTTGAGGCGGCTGCTGGAGCTGCGAGAGCAGA CCGTGGCGCGGCTGGAGCGCTGCCTGGCGCATCGGCGCGTGCGCGGAGAG GAACAGTTTCATCGCCTCGGTACGTTGTGTGCTCACGTTTCGTCTGCCTC TTTGTGTAACCATGGGACTGGCAGGCCAACATGAAACTGGCCTGAAGCGA TAGCGGTACGCGTTCCTGCCGACATTTTGGCGTGGGGCACACCTACTTGT CAGAACACAGTTTTATCGGTCACCGCGTCCGCCCGCGTGCCGCCGTTGGC CAAAATCCCGTCGATTGCTGGTCTTCAATAGGACTGCTCACAACCTCGCC TTAAGTCAGCGAGGGCCTGCTCGTTCCTCTTCTCAGCATCCCCCCCCGGC CCCTTCTTACGCCGCAAAATAACCCAACCGGCCGACCGACCACGGCCGGC GGACGCCAGGCATGTGTGGCTGTGGCGAACGCGTCAACTCGATCGAATTT TACGAAGCGCAGTTGCAGCAGCTGAACGATGCGGTGCGGCGGGAGCAACG CCGCCGCCACACGCACACCCACCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5797:147..2771-

>mRNA_P-wetherbeei_contig5797.1.1 ID=mRNA_P-wetherbeei_contig5797.1.1|Name=mRNA_P-wetherbeei_contig5797.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=927bp|location=Sequence derived from alignment at P-wetherbeei_contig5797:147..2771- (Phaeothamnion wetherbeei SAG_119_79)
AGGTACGAGAACGCTTCAGCTTTCCGCCAGACAGAATGGGTGGACCTCGA
TACGGTTACGCTCACCCTCATCGCCAACATGATGGTGGCGCTTCTGTGCC
TCTTTTACTTCTGGTCGCTCCGGCGCCACAGCCCGGAGTACTTTTCCCAC
AAGCGGCGCAAGCTGCCGGGGAGCACCCCACCGGACTTGCCTGTCGCCGG
ATTCTTTGGCTGGCTGCGCCAGCTGCTGGCCATGCGGGAGGCGGAGATCC
TCGAGTACGCCGGCTTCGACGCCGTCATCCTCCTTCGATTTTACAAGCTG
GCATTTAAGGTGTTTGCCATCTTCTCGGTGTACGGGCTGGCGGTGATCGT
GCCGACAAACGTGCAAGGCGGGTTGCGCACGTCAGAGCACGTCCAGACGA
CCATCAACACCTTCAACCAGCTTAGTATGTCGAACATCCAGCACTATGAC
AGTAAGATGTGGGTGCACGCCGCGGGGCTCTGGCTGCTCAGCGCCGTCAC
CATGTACTACCTCTTCGTTGAGTACCAGTTCTACACCAGCCTCAGGCACG
AGTACCTGCGGCGCAAGGCAGCACACCTGCGGACCATCGTGGTGGAGGGC
GTCCCCTCCAGCATGCGGACCCCCAGCAAGCTCTTCGCCTACTTCAACAC
GCTCTACCCCAACGACGTCGTGTGCGTGCACGCCCCGCAGGATTTGAAGC
ACTTGAGGCGGCTGCTGGAGCTGCGAGAGCAGACCGTGGCGCGGCTGGAG
CGCTGCCTGGCGCATCGGCGCGTGCGCGGAGAGGAACAGTTTCATCGCCT
CGGTACGTTGTGCATGTGTGGCTGTGGCGAACGCGTCAACTCGATCGAAT
TTTACGAAGCGCAGTTGCAGCAGCTGAACGATGCGGTGCGGCGGGAGCAA
CGCCGCCGCCACACGCACACCCACCGC
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