mRNA_P-wetherbeei_contig5797.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: D7FQJ6_ECTSI (Early-responsive to dehydration protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQJ6_ECTSI) HSP 1 Score: 342 bits (876), Expect = 1.180e-105 Identity = 172/303 (56.77%), Postives = 219/303 (72.28%), Query Frame = 1
Query: 1 RYENASAFRQTEWVDLDTVTLTLIANMMVALLCLFYFWSLRRHSPEYFSHKRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQGGLRTSEHVQTTINTFNQLSMSNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLERCLAHRRVRGEEQFHRLGTLCMCGCGERVNSIEFYEAQLQQLNDAVRREQRRR 909
+YENAS F QTEWVD+DT+++ L N+++ LL L +FWS RRH P YFS KR LP TPPDLP +GF W+ L+A E +IL YAGFDA I LRFY +AFKVFA+F+ YGL V++P NV S QT INTFN+LSMSN+QHY+ MW+HA G++LLSA+ MY+L VEY++YT+LRH +LRRK+AHLRTIVV+GVP MR+ SKLF YFNTLYP +VV VH PQ+L LR L+ R+ + L + LA + VRGEEQ+H G LC +RVN++ F QL +LN A+ EQ +R
Sbjct: 35 KYENASVFHQTEWVDVDTISINLAGNVVIFLLALTFFWSSRRHYPSYFSSKRYYLPDQTPPDLPSSGFLSWIMPLMAFPEDDILTYAGFDAAIFLRFYAVAFKVFALFAPYGLLVLIPVNVMETPSDSNQAQTNINTFNRLSMSNVQHYNPCMWLHALGIYLLSALAMYFLVVEYRYYTNLRHRFLRRKSAHLRTIVVQGVPREMRSDSKLFTYFNTLYPEEVVNVHIPQNLSRLRGLIRERQAVLENLGKGLAEKGVRGEEQYHYTGVLCYRR--KRVNTVGFCSTQLDRLNLAIATEQDQR 335
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: A0A836CHQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ4_9STRA) HSP 1 Score: 270 bits (689), Expect = 1.690e-79 Identity = 155/329 (47.11%), Postives = 196/329 (59.57%), Query Frame = 1
Query: 13 ASAFRQTEWVDLDTVTLTLIANMMVALLCLFYFWSLRRHSPEYFSHKR-RKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQGGLRTSEHVQTTINTFNQLSMSNIQHYDSK-----------------------------MWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLERCLAHRRVRGEEQFHRLGTLCMCGCGERVNSIEFYEAQLQQLNDAVRREQRRR 909
+SAF QTEWV+ T+++T N VA++CLF+FWS+R+H+ YFS KR R PGS PPDLP GF W+ L+ MRE E+L YAGFD +I LRFYKLAFKVF IF++YGLAVI+P N+ GG R S VQT+IN+FNQLSMSNIQHYDSK MWVHA G++LL+A+ Y+L+VE++FY LRHEYL R+A HLRTIVVE R++ +ARLER +A +R+ G E HRLG +CG G VNSI+ Y+ QL LN + EQ R+
Sbjct: 45 SSAFGQTEWVEWSTISITAAMNAAVAVICLFFFWSMRQHNAGYFSLKRGRAPPGSVPPDLPT-GFVDWMGPLMGMREQEVLRYAGFDTLIFLRFYKLAFKVFGIFALYGLAVIIPANIAGGQRNSFRVQTSINSFNQLSMSNIQHYDSKASALCIRRTSALKLAIVTEHCSSRLAELQMWVHAFGVYLLTALVQYFLYVEFRFYKQLRHEYLMRRAPHLRTIVVEE-----------------------------------------RQRVLARLERLMALKRITGAEPHHRLG---VCGFGPNVNSIQVYKQQLTTLNMTISSEQARK 328
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: A0A7S3UXJ8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXJ8_HETAK) HSP 1 Score: 215 bits (548), Expect = 8.870e-64 Identity = 126/302 (41.72%), Postives = 184/302 (60.93%), Query Frame = 1
Query: 10 NASAFRQTEWVDLDTVTLTLIANMMVALLCLFYFWSLRRHS--PEYFSHKRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQGGLRTSEHVQTTINTFNQLSMSNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLERCLAHRRVRGEEQFHRLGTLCMCGCGERVNSIEFYEAQLQQLNDAVRREQRRR 909
++SA+ Q+E +DLDT+ LT + N + L L F LR+ + P FS +R LP TPPDLP + F W+ +A EIL YAG DA++ +RF+ L ++F IF+VYGL V++P N G S Q+ NT L++SNI + MW H G++LL+A+TM+ L VE++ YT LRHE+LRR+ A R+++VE VP +R+ + L AYF LYP VV V Q L+ L RL+E RE +A+LE + H++ G+ T G G + ++ +++A+L +LND V REQ RR
Sbjct: 3 DSSAYDQSENLDLDTIGLTFLLNGLAGLTFLVIFGKLRQRTTHPYSFSTRRLHLPKQTPPDLPKSSIFSWVMPCMAFNFDEILYYAGLDALMYIRFHWLGLRIFGIFAVYGLCVLIPVNALG----SNGEQSLFNT---LTLSNIADGSNTMWFHVVGMYLLTAITMWQLVVEFRTYTRLRHEFLRRRRALFRSVLVEEVPRPLRSQATLRAYFEKLYPGQVVEVFLCQRLEALTRLIEQRESVLAKLEHAMVHQQRFGKT------TYVWRGWGHKEEAVTYWQARLHELNDEVSREQARR 291
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: A0A1Z5JV61_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JV61_FISSO) HSP 1 Score: 160 bits (404), Expect = 2.770e-40 Identity = 103/318 (32.39%), Postives = 170/318 (53.46%), Query Frame = 1
Query: 4 YENASAFRQTE--WVDLDTVTLTLIANMMVALLCLFYFWSLRRHSPEYFSHKRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQGGLRTSEHV-QTTINTFNQLSMSNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLER-----CLAHRRVRGEEQFHR--LGTL------CMCGCGERVNSIEFYEAQLQQLNDAVRREQRRR 909
Y + S++R T + L + LTL A ++ L C F+ ++ SP + S +R +LP PP LPV G+F W+R +L + + EI+ G+D++I LRF++LA + S++ V++P N G HV + + F + +M+N+ ++WVH +LL+ + + L VEY+ + S+RH YL + HLRT++V +P +R+P K+ YF +YP+ V V Q+ L RL++ R +A LE C ++ E + L TL C G + + Y +QL++LN+ + REQRRR
Sbjct: 78 YISESSYRATSMTFATLLVLYLTLSAVFLIFLSC---FYHSQKTSPLFISPRRHRLPKLVPPPLPVEGYFSWVRVMLFLSDEEIINRIGYDSLIFLRFHRLALRCIVKMSLFSFVVLLPLNYTGSNVLDLHVGKILVTDFMRFTMANVSAGSPRLWVHCFAAYLLTGIVVRELLVEYETFNSIRHLYLLNREPHLRTVLVTNIPRHLRSPKKITNYFKHVYPDAVRSVFMCQNCTDLERLVQQRTAILASLEHELLLLCRNEKKKLYEPSMWKKFLATLPSRLEECGVAEGTQERLVRLY-SQLEELNNEIEREQRRR 391
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: A0A7S3QEH8_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QEH8_9STRA) HSP 1 Score: 150 bits (380), Expect = 4.320e-37 Identity = 85/255 (33.33%), Postives = 144/255 (56.47%), Query Frame = 1
Query: 10 NASAFRQTEWVDLDTVTLTLIANMMVALLCLFY--FWSLRRHSPEYFSHKRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQGGLRTSE-----HVQTTINT-FNQLSMSNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLE 750
+ SAFR+T + TL ++ +M ++ +F F+ ++ SP + S +R +LP PP LPV G F W++ M + EI+ GFDA+I +RF++LA + S++ V++P N GG + +V + + T F + SM+N++ ++WVH +LLS + M L VEY + ++RH Y+ K HLRT++V +P +R+P K+ YF +YPN V V Q+L HL +++ R + + ++E
Sbjct: 106 DVSAFRET---SMSFATLVMLFTIMTCVVIVFLSCFYHNQKTSPLFASPRRHRLPRLVPPPLPVDGTFSWIKVCFYMSDEEIINRVGFDALIFIRFHRLALRCILKMSIFSFLVLLPLNFTGGGHANASDLKGYVGSLLFTDFLRFSMANVEGGSPRLWVHCFAAYLLSGIVMRELVVEYNAFNNIRHRYMLSKEPHLRTVLVSNIPRHLRSPKKIRNYFKHVYPNAVKNVTMCQNLIHLEKMVARRTKILNKIE 357
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: A0A7S2LNL3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LNL3_9STRA) HSP 1 Score: 149 bits (376), Expect = 4.400e-37 Identity = 95/309 (30.74%), Postives = 169/309 (54.69%), Query Frame = 1
Query: 52 TVTLTLIANMMVALLCLFYFWSLRRHSPEYFSHKRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQGGLRTSE-----HVQTTINT-FNQLSMSNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLER-----CLAHRR--VRGEEQFHRLGT-LCMCGCGERVNSIEFYEAQ---------LQQLNDAVRREQRRR 909
T+++ L +++L+ L F+ ++ +P + S +R +LP PP LPV G F W++ L + + EI++ GFDA+I LRF++LA + SV+ V++P N GG R +V + + T F + +M+N+ +++WVH +LL+ + + L +EY Y+S+RH YL K HLRT++V +P +R+P K+ YF +YP V V Q+L +L +++ R +A++E+ C +R + H + T + C E++ ++ EAQ L+++N ++ +EQ RR
Sbjct: 118 TLSMMLFIMSIISLVFLSCFYHNQKTAPLFVSPRRHRLPKLVPPPLPVDGPFSWVKVCLFISDEEIIKRVGFDALIFLRFHRLALRCIVKMSVFSFLVLLPLNFTGGGRAKANDLKGYVDSLLFTDFLRFTMANVSSGSNRLWVHCFAAYLLTTIVVRELLIEYNAYSSIRHRYLLSKEPHLRTVLVSNIPRHLRSPRKIGNYFRHVYPEAVKSVTICQNLINLEKMVAERTAVLAQIEKELLILCRTEKRKLLADTRLAHHISTAVWSCHLCEKIGVLD--EAQERISKLYVRLEEMNKSIEKEQLRR 424
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: A0A7S2K0D2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K0D2_9STRA) HSP 1 Score: 144 bits (363), Expect = 9.480e-37 Identity = 87/290 (30.00%), Postives = 151/290 (52.07%), Query Frame = 1
Query: 109 FWSLRRHSPEYFSHKRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQG-GLRTSEHV-----QTTINTFNQLSMSNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLER-----CLAHRR---VRGEEQFHRLG---------TLCMCGCGERVNSIEFYEAQLQQLNDAVRREQRRR 909
F+ ++ SP + S +R +LP PP LPV G F W+R +L + + EI+ G+DA+I LRF++LA + S + V++P N G G + ++ + F + +M+N+ ++WVH ++LL+ + + L VEY + ++RH YL + AHLRT++V +P +R PSK+ YF +YP V V Q+L L +L++ R + +E+ C + +R + F R+ L GC + + + ++L++LND + +E RR
Sbjct: 6 FYHNQKTSPLFISPRRHRLPKLVPPALPVNGTFSWVRVVLFLSDEEIIHRIGYDALIFLRFHRLALRCIVKMSFFSFLVVLPLNFTGDGHKMNDGEGYGMGELLFTDFMRFTMANVSGGSPRLWVHCFAIYLLTGIVVRELLVEYNAFNNIRHRYLLSREAHLRTVLVTNIPRHLRAPSKITTYFKNVYPEAVKSVTICQNLIRLEKLVQKRTHILTAIEKELLVLCRSEKRKLVITTLSAFDRVKFTVTNLPKKLLSCVGCSDGQERLAWLYSKLEELNDGIEKEHVRR 295
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: A0A7S1B8V0_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8V0_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.080e-34 Identity = 100/316 (31.65%), Postives = 163/316 (51.58%), Query Frame = 1
Query: 31 TEWVDLDTVTLTLIANMMVALLCLFY--FWSLRRHSPEYFSHKRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQGGLR-TSEHVQTTINT-----FNQLSMSNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLER-----CLAHRR-VRGEEQFHRLGTL-CMCGCGERVNSIEF--------YEAQLQQLNDAVRREQRRR 909
T + TL ++ ++ LL F F+ ++ SP + S +R +LP PP LPV G F W+ M + EI+ G+DA+I LRF++LA + SV+ VI+P N GG T +V+ + F + +M+ + ++WVH +LL+ + + L VEY + ++RH YL + +HLRT++V +P MR PSK+ YF +YP V V Q+L L L++ R+ ++++ER CL +R + G F RL + C + +N I+ YE +L++ N +R E +RR
Sbjct: 166 TRDTSMSFATLAMLYALLSCLLFTFLSCFYHNQKTSPLFISPRRHRLPKLVPPPLPVDGPFRWISVCALMSDEEIINRVGYDALIFLRFHRLALRCIIKMSVFSFFVILPLNFTGGENNTDSNVKEYMGKLFFTDFMKFTMAYVSFGSPRLWVHCVAAYLLTGIVVRELLVEYNAFNNIRHRYLLSRESHLRTVLVTNIPRHMRAPSKITNYFKHVYPEAVKSVTVCQNLIKLEYLVKKRKTVISKIERELLKLCLQEKRKLVGLNIFERLAQIFCTTFVCQWLNCIDSAHERLANQYE-RLEEFNRDIRNEMKRR 480
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: A0A835Z3W6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W6_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.550e-34 Identity = 88/208 (42.31%), Postives = 122/208 (58.65%), Query Frame = 1
Query: 292 YKLAFKVFAIFSVYGLAVIVPTNVQGGLRTSEHVQTTINTFNQLSMSNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLERCLAHRRVRG-----EEQFHRLGTLCMCGCGERVNSIEFYEAQLQQLNDAVRREQ 900
Y LA K+ A +VY L V++P NV G T E + + N+F+ LSMSN+ + +WVHA G L++ ++L E+ YT LRH YL+ +A H+RTI++E VP+ MR ++++ YFN LYPN + V QDL+ LRRLLE RE T+ARLER L RR R E L C ERV + + + +L LN A+ EQ
Sbjct: 2 YLLAAKISAATAVYALCVVLPVNVVGDNLTDE--EASANSFSLLSMSNVAPGSATLWVHAVGTLLMTIAAFFFLNGEFTTYTRLRHAYLKMRAPHMRTILLEDVPAEMRGAAQIYIYFNHLYPNSIASVACMQDLRPLRRLLEQRESTLARLERLLL-RRARAAPNAAEPTMWTGPALAPCASCERVEAASWLQQRLDALNAAIGVEQ 206
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Match: K0R9G4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R9G4_THAOC) HSP 1 Score: 140 bits (353), Expect = 1.240e-33 Identity = 83/253 (32.81%), Postives = 132/253 (52.17%), Query Frame = 1
Query: 52 TVTLTLIANMMVALLCLFYFWSLRRHSPEYFSHKRRKLPGSTPPDLPVAGFFGWLRQLLAMREAEILEYAGFDAVILLRFYKLAFKVFAIFSVYGLAVIVPTNVQGGLR---------------TSEHVQTTINTFNQLSM----SNIQHYDSKMWVHAAGLWLLSAVTMYYLFVEYQFYTSLRHEYLRRKAAHLRTIVVEGVPSSMRTPSKLFAYFNTLYPNDVVCVHAPQDLKHLRRLLELREQTVARLER 753
T+ + I ++ L+ L F+ ++ SP + S +R +LP PP LPV G F W+R L M + EIL GFDA+I LRF++LA + S++ V++P N GG R T E Q + ++ + H +++WVH +LL+ + + L +EY Y+S+RH YL K HLRT++V +P +R+P K+ YF +YP V V Q+L +L L+ R +A++E+
Sbjct: 80 TLAVMYIIMALILLVFLSCFYHNQKTSPLFVSPRRHRLPKLVPPPLPVDGAFSWVRVCLFMSDEEILSRVGFDALIFLRFHRLALRCIVKMSIFSFIVLLPLNFTGGGRAKAEDLKGYFDSLLFTGEKTQLLCRVYPLPTLVARLHEVYHGSNRLWVHCFAAYLLTIIVVRELLLEYNAYSSIRHRYLLSKEPHLRTVLVSNIPRHLRSPRKIGLYFRHVYPEAVKSVTICQNLLNLETLVAERTGVLAQIEK 332 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5797.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5797.1.1 >prot_P-wetherbeei_contig5797.1.1 ID=prot_P-wetherbeei_contig5797.1.1|Name=mRNA_P-wetherbeei_contig5797.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=309bp RYENASAFRQTEWVDLDTVTLTLIANMMVALLCLFYFWSLRRHSPEYFSHback to top mRNA from alignment at P-wetherbeei_contig5797:147..2771- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5797.1.1 ID=mRNA_P-wetherbeei_contig5797.1.1|Name=mRNA_P-wetherbeei_contig5797.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2625bp|location=Sequence derived from alignment at P-wetherbeei_contig5797:147..2771- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5797:147..2771- >mRNA_P-wetherbeei_contig5797.1.1 ID=mRNA_P-wetherbeei_contig5797.1.1|Name=mRNA_P-wetherbeei_contig5797.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=927bp|location=Sequence derived from alignment at P-wetherbeei_contig5797:147..2771- (Phaeothamnion wetherbeei SAG_119_79)back to top |