mRNA_P-wetherbeei_contig57894.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57894.1.1 vs. uniprot
Match: A0A7W6LP78_9SPHN (Uncharacterized protein n=3 Tax=Sphingobium TaxID=165695 RepID=A0A7W6LP78_9SPHN) HSP 1 Score: 253 bits (647), Expect = 2.220e-78 Identity = 126/169 (74.56%), Postives = 142/169 (84.02%), Query Frame = 1
Query: 1 RPGQIAYLSVLSRWQLTLGERETDPVSPMFGEPRHFVLAGDTRQTRIHPSRVVCFKGLPVPAMLGTAWDDHFWGMSVVEAVDEAVQQATTACAGFAALIDEAKIDVFRFGGMAETIGHGPEGEATVMKRVELTTQGKSIHRAVILDKDDEWDQRQLTLAGVRDVIITYD 507
RPGQI YLSVLSRWQL+LGE ETDP S FG+PR+F L+G RQ IHPSRV FKGLP+PA+ T+W+D+FWGMSVVEA DEAVQQATTACAGF+ LIDEAKIDVFRF G E + P+GEA +MKRVELT GKS+HRAVILDK+DEW QRQL+LAGVRDVIITYD
Sbjct: 122 RPGQIRYLSVLSRWQLSLGEMETDPESDNFGQPRYFRLSGTGRQVDIHPSRVAVFKGLPIPAIRMTSWEDNFWGMSVVEACDEAVQQATTACAGFSVLIDEAKIDVFRFNGTVEQLSQ-PDGEAKLMKRVELTNTGKSVHRAVILDKEDEWVQRQLSLAGVRDVIITYD 289
BLAST of mRNA_P-wetherbeei_contig57894.1.1 vs. uniprot
Match: A0A0Q8RA68_9SPHN (Uncharacterized protein n=1 Tax=Sphingomonas sp. Root720 TaxID=1736595 RepID=A0A0Q8RA68_9SPHN) HSP 1 Score: 242 bits (618), Expect = 7.260e-74 Identity = 117/169 (69.23%), Postives = 137/169 (81.07%), Query Frame = 1
Query: 1 RPGQIAYLSVLSRWQLTLGERETDPVSPMFGEPRHFVLAGDTRQTRIHPSRVVCFKGLPVPAMLGTAWDDHFWGMSVVEAVDEAVQQATTACAGFAALIDEAKIDVFRFGGMAETIGHGPEGEATVMKRVELTTQGKSIHRAVILDKDDEWDQRQLTLAGVRDVIITYD 507
RPGQI YL+VLSRW+L LGE + DP S F +P+ + L G +RQ IHPSRVVCF+GLP+PA G W+D FWGMSVVEAVDEAVQQATTACAGFAALIDEAKIDVFR GMAE + P GE +++RVE+T GKS+HRAV+LDK+DEW+QRQL L GVRDVI+TYD
Sbjct: 146 RPGQIRYLTVLSRWELNLGEEDRDPESDTFKQPKFYRLPGTSRQVDIHPSRVVCFRGLPIPAFPGMTWEDRFWGMSVVEAVDEAVQQATTACAGFAALIDEAKIDVFRLAGMAEQLLQ-PGGEDRLLQRVEMTNTGKSVHRAVVLDKEDEWEQRQLALTGVRDVIVTYD 313
BLAST of mRNA_P-wetherbeei_contig57894.1.1 vs. uniprot
Match: UPI000831FE8D (DUF1073 domain-containing protein n=1 Tax=Sphingobium sp. CCH11-B1 TaxID=1768781 RepID=UPI000831FE8D) HSP 1 Score: 172 bits (436), Expect = 2.800e-48 Identity = 87/167 (52.10%), Postives = 112/167 (67.07%), Query Frame = 1
Query: 4 PGQIAYLSVLSRWQLTLGERETDPVSPMFGEPRHFVLAGDTRQTRIHPSRVVCFKGLPVPAMLGTAWDDHFWGMSVVEAVDEAVQQATTACAGFAALIDEAKIDVFRFGGMAETIGHGPEGEATVMKRVELTTQGKSIHRAVILDKDDEWDQRQLTLAGVRDVIITY 504
P + YL VLSR QL LG+ ETDP SPMFGEPR F LAG IHPSRV+ FKGLP P + T +D +WG S+++ VD+A++QA TA GFA+LIDEAK+DVF GM ET+ P GEA M ++ + GKS +R + L + + W+ RQ+ AG+ DVI TY
Sbjct: 154 PNAVDYLVVLSRHQLQLGDMETDPASPMFGEPRWFRLAGGRNNIDIHPSRVIPFKGLPAPGLYATNAEDQYWGDSIIQTVDDAIKQAVTATQGFASLIDEAKVDVFTMPGMYETLAQ-PGGEAKFMAALQASAMGKSNYRMLALGEGETWETRQIAWAGMPDVIKTY 319
BLAST of mRNA_P-wetherbeei_contig57894.1.1 vs. uniprot
Match: UPI001356EE3E (DUF1073 domain-containing protein n=1 Tax=unclassified Novosphingobium TaxID=2644732 RepID=UPI001356EE3E) HSP 1 Score: 163 bits (413), Expect = 4.520e-45 Identity = 89/167 (53.29%), Postives = 114/167 (68.26%), Query Frame = 1
Query: 1 RPGQIAYLSVLSRWQLTLGERETDPVSPMFGEPRHFVLAGDTRQTRIHPSRVVCFKGLPVPAMLGTAWDDHFWGMSVVEAVDEAVQQATTACAGFAALIDEAKIDVFRFGGMAETIGHGPEGEATVMKRVELTTQGKSIHRAVILDKDDEWDQRQLTLAGVRDVIIT 501
+P QI L L R QLTLG + D +SP F EP F L R IH +R++ FKGL VP+M T WDD FWG SVV+ V+EAVQ AT+A +GFA+LIDEAK+DVF+F +AET+ P G+A + KR++L TQ KSIHR++ LD DD W+ R L AG +D+I T
Sbjct: 142 KPEQIENLVPLYRSQLTLGIADDDVLSPFFDEPVDFRLNTAARPL-IHRTRLIFFKGLMVPSMHFTNWDDRFWGDSVVQVVNEAVQNATSATSGFASLIDEAKVDVFKFAKLAETLVQ-PGGDAKIRKRIDLATQEKSIHRSISLDADDAWETRTLNFAGAKDMITT 306
BLAST of mRNA_P-wetherbeei_contig57894.1.1 vs. uniprot
Match: UPI000CDB6F1F (DUF1073 domain-containing protein n=1 Tax=Novosphingobium sp. HII-3 TaxID=2075565 RepID=UPI000CDB6F1F) HSP 1 Score: 161 bits (407), Expect = 3.710e-44 Identity = 87/167 (52.10%), Postives = 110/167 (65.87%), Query Frame = 1
Query: 1 RPGQIAYLSVLSRWQLTLGERETDPVSPMFGEPRHFVLAGDTRQTRIHPSRVVCFKGLPVPAMLGTAWDDHFWGMSVVEAVDEAVQQATTACAGFAALIDEAKIDVFRFGGMAETIGHGPEGEATVMKRVELTTQGKSIHRAVILDKDDEWDQRQLTLAGVRDVIIT 501
+P QI L L R Q+TLG + D +SP F EP F L R +IH +R+V FKG PVP W+D FWG SVV+ V+EAVQ ATTA AGFAALIDEAK+DVF+F +AET+ P G+ + KR++L T KSIHR+V LD +D W+ R L AG +D+I T
Sbjct: 142 QPEQIVSLVPLYRTQITLGLPDDDVLSPYFDEPVDFALNTAARP-KIHRTRLVFFKGQPVPGFSSVNWEDRFWGDSVVQVVNEAVQNATTATAGFAALIDEAKVDVFKFAKLAETLA-APGGDEKIRKRIDLATTEKSIHRSVSLDAEDGWETRTLNFAGAKDMITT 306
BLAST of mRNA_P-wetherbeei_contig57894.1.1 vs. uniprot
Match: A0A1G0I087_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_22 TaxID=1798290 RepID=A0A1G0I087_9GAMM) HSP 1 Score: 158 bits (399), Expect = 3.670e-42 Identity = 83/161 (51.55%), Postives = 107/161 (66.46%), Query Frame = 1
Query: 13 IAYLSVLSRWQLTLGERETDPVSPMFGEPRHFVLAGDTRQTRIHPSRVVCFKGLPVPAMLGTAWDDHFWGMSVVEAVDEAVQQATTACAGFAALIDEAKIDVFRFGGMAETIGHGPEGEATVMKRVELTTQGKSIHRAVILDKDDEWDQRQLTLAGVRDVI 495
+ Y+ V +R++L+LGE+ D SP +G P++F +A D + IHPSR+V F G PVP M T W+D FWG SV++ VD AV+ A A GFA LIDEAKIDV+R G E + EATV +RVE T GKS R V LDKDDE+ QRQLTL G+ ++I
Sbjct: 143 LKYVHVFNRFELSLGEKNKDITSPWYGHPQYFRIASDYQSVPIHPSRMVVFPGAPVPNMGMTTWEDQFWGDSVIQRVDRAVKNAVKANDGFARLIDEAKIDVYRMAGFMEQLA---ANEATVRQRVEYTDAGKSSLRGVFLDKDDEFIQRQLTLTGMPEMI 300
BLAST of mRNA_P-wetherbeei_contig57894.1.1 vs. uniprot
Match: A0A2W6WNT5_9SPHN (Portal protein n=2 Tax=Sphingobium TaxID=165695 RepID=A0A2W6WNT5_9SPHN) HSP 1 Score: 157 bits (397), Expect = 7.040e-42 Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 1
Query: 13 IAYLSVLSRWQLTLGERETDPVSPMFGEPRHFVLAGDTRQTRIHPSRVVCFKGLPVPAMLGTAWDDHFWGMSVVEAVDEAVQQATTACAGFAALIDEAKIDVFRFGGMAETIGHGPEGEATVMKRVELTTQGKSIHRAVILDKDDEWDQRQLTLAGVRDVI 495
+ Y+ V +RW+LT+GE + D S FG+P+HF + G +IHPSRV+ FKG PVP G W+DHFWG S+V +D AV+ A A GFA +IDEAKID++R G + + E V KRV+ T GKS R V LDKDDE+ QRQLTL G+ ++I
Sbjct: 146 LKYVHVFNRWELTIGEEQRDITSLWFGQPQHFKINGKLDNPKIHPSRVIVFKGSPVPRFPGVTWEDHFWGDSIVFRIDRAVKNAIKANDGFARMIDEAKIDIYRLSGFMQNL---ISNEDEVRKRVQYTDAGKSSLRGVYLDKDDEFIQRQLTLTGMPEMI 303
BLAST of mRNA_P-wetherbeei_contig57894.1.1 vs. uniprot
Match: A0A084EGT7_SPHYA (Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae TaxID=13690 RepID=A0A084EGT7_SPHYA) HSP 1 Score: 155 bits (391), Expect = 4.660e-41 Identity = 79/167 (47.31%), Postives = 108/167 (64.67%), Query Frame = 1
Query: 1 RPGQ--IAYLSVLSRWQLTLGERETDPVSPMFGEPRHFVLAGDTRQTRIHPSRVVCFKGLPVPAMLGTAWDDHFWGMSVVEAVDEAVQQATTACAGFAALIDEAKIDVFRFGGMAETIGHGPEGEATVMKRVELTTQGKSIHRAVILDKDDEWDQRQLTLAGVRDVI 495
+PG+ + Y+ V +RW+LT+GE + D S FG+P++F + G +IHPSRV+ FKG PVP G W+DHFWG S+V +D AV+ A A GFA +IDEAKID++R G + + E V KRV+ T GKS R V LDKDDE+ QRQL+L G+ ++I
Sbjct: 140 QPGKDSLKYVHVFNRWELTIGEEQRDITSLWFGQPQYFQINGKLDNPKIHPSRVIVFKGSPVPRFPGVTWEDHFWGDSIVFRIDRAVKNAIKANDGFARMIDEAKIDIYRLSGFMQNL---ISNEDEVRKRVQYTDAGKSSLRGVYLDKDDEFTQRQLSLTGMPEMI 303
BLAST of mRNA_P-wetherbeei_contig57894.1.1 vs. uniprot
Match: A0A5B8CC48_SPHSA (DUF1073 domain-containing protein n=1 Tax=Sphingobium fuliginis ATCC 27551 TaxID=1208342 RepID=A0A5B8CC48_SPHSA) HSP 1 Score: 153 bits (386), Expect = 2.730e-40 Identity = 81/161 (50.31%), Postives = 102/161 (63.35%), Query Frame = 1
Query: 13 IAYLSVLSRWQLTLGERETDPVSPMFGEPRHFVLAGDTRQTRIHPSRVVCFKGLPVPAMLGTAWDDHFWGMSVVEAVDEAVQQATTACAGFAALIDEAKIDVFRFGGMAETIGHGPEGEATVMKRVELTTQGKSIHRAVILDKDDEWDQRQLTLAGVRDVI 495
+ Y V +RW+LT+ E E D SP FG+PR F + G Q RIHPSR+V FKG VP G W+D+FWG SV+ VD AV+ A A GFA LIDEAKID++R G + + E V KRV+ T GKS R V LDKDDE+ QRQL+L G+ ++I
Sbjct: 146 LKYAHVFNRWELTVEEEERDVNSPWFGQPRFFRINGTVGQPRIHPSRMVVFKGARVPRFPGVTWEDYFWGDSVLTRVDRAVKNAIKANDGFARLIDEAKIDIYRLSGFMQNL---ISNEDAVRKRVQYTDAGKSSLRGVYLDKDDEFTQRQLSLTGMPEMI 303
BLAST of mRNA_P-wetherbeei_contig57894.1.1 vs. uniprot
Match: A0A7W6BKL0_9SPHN (Uncharacterized protein n=3 Tax=Sphingobium jiangsuense TaxID=870476 RepID=A0A7W6BKL0_9SPHN) HSP 1 Score: 149 bits (375), Expect = 1.930e-39 Identity = 81/167 (48.50%), Postives = 104/167 (62.28%), Query Frame = 1
Query: 4 PGQIAYLSVLSRWQLTLGERETDPVSPMFGEPRHFVLAGDTRQTRIHPSRVVCFKGLPVPAMLGTAWDDHFWGMSVVEAVDEAVQQATTACAGFAALIDEAKIDVFRFGGMAETIGHGPEGEATVMKRVELTTQGKSIHRAVILDKDDEWDQRQLTLAGVRDVIITY 504
PG I L L R Q+ LG+ + D +SP FGEP F + Q IHPSR+V FKG VP + T+W+D FWG SVV+ VDEAV+ ATTA GFAALIDEAK+DV GM E + P G+ M ++ GKSIHR + L + + W+ RQ+ AG+ +VI TY
Sbjct: 148 PGMIESLVPLYRTQIVLGQMDDDLLSPTFGEPTVFRV-NTHAQPIIHPSRLVIFKGQMVPGLYSTSWEDRFWGDSVVQVVDEAVKDATTATGGFAALIDEAKVDVLTMPGMYEMLAR-PGGQEQFMAALQAAATGKSIHRMLALGEGETWETRQINWAGMPEVIKTY 312 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57894.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57894.1.1 >prot_P-wetherbeei_contig57894.1.1 ID=prot_P-wetherbeei_contig57894.1.1|Name=mRNA_P-wetherbeei_contig57894.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp RPGQIAYLSVLSRWQLTLGERETDPVSPMFGEPRHFVLAGDTRQTRIHPSback to top mRNA from alignment at P-wetherbeei_contig57894:1..507- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57894.1.1 ID=mRNA_P-wetherbeei_contig57894.1.1|Name=mRNA_P-wetherbeei_contig57894.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig57894:1..507- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57894:1..507- >mRNA_P-wetherbeei_contig57894.1.1 ID=mRNA_P-wetherbeei_contig57894.1.1|Name=mRNA_P-wetherbeei_contig57894.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig57894:1..507- (Phaeothamnion wetherbeei SAG_119_79)back to top |