mRNA_P-wetherbeei_contig57862.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig57862.1.1
Unique NamemRNA_P-wetherbeei_contig57862.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig57862.1.1 vs. uniprot
Match: A0A1M5CLC4_9HYPH (Cyclopropane-fatty-acyl-phospholipid synthase n=2 Tax=Kaistia TaxID=166953 RepID=A0A1M5CLC4_9HYPH)

HSP 1 Score: 252 bits (644), Expect = 6.670e-80
Identity = 117/168 (69.64%), Postives = 140/168 (83.33%), Query Frame = 1
Query:    1 LAKEKFDYAKARVARLGLQDRVTLELRDYALVEGSFDKISSIGMFEQVGIDNHATYFKTINRLLKPDGLYLHHAISRPAKRDDKAFRKQRPEYAALTRYIFPGGELDHLGMTIANLDRHGFEVHDVEGWREHYARTXRLWHDRLLSNIVAAEAEIGVHKTRLWLVYLA 504
            LA E++ +A+ +V RLGLQDR+  ELRDY  V+G FDKI+SIGMFEQVGI N+ TYF+T++RLLKP GLYLHHAI+RPAKR +KAFR+  PEYAA+ RYIFPGGELDHLGM++ANL+R+GFEVHDVEGWREHY  T R WHDRLL+    A AE+G  KTRLWL Y+A
Sbjct:  237 LADEQYVFAREKVTRLGLQDRIRFELRDYTQVQGQFDKIASIGMFEQVGIPNYPTYFQTVHRLLKPGGLYLHHAIARPAKRTEKAFRRTNPEYAAIRRYIFPGGELDHLGMSVANLERYGFEVHDVEGWREHYQHTLRHWHDRLLARYDEAVAEVGEVKTRLWLAYIA 404          
BLAST of mRNA_P-wetherbeei_contig57862.1.1 vs. uniprot
Match: A0A431MB30_9BRAD (Class I SAM-dependent methyltransferase n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A431MB30_9BRAD)

HSP 1 Score: 249 bits (635), Expect = 1.060e-78
Identity = 111/168 (66.07%), Postives = 144/168 (85.71%), Query Frame = 1
Query:    1 LAKEKFDYAKARVARLGLQDRVTLELRDYALVEGSFDKISSIGMFEQVGIDNHATYFKTINRLLKPDGLYLHHAISRPAKRDDKAFRKQRPEYAALTRYIFPGGELDHLGMTIANLDRHGFEVHDVEGWREHYARTXRLWHDRLLSNIVAAEAEIGVHKTRLWLVYLA 504
            L++++FD A+ ++ARLGL DRVT+E+++++ ++G FDKI+SIGMFE VGI NH TYF+TI+RLL+P G+YLHHAI+RPAKR ++ F++  PEY A+ +YIFPGGELDH+GM+ ANL+R+GFEVHD EGWREHYART R WHDRLL N  AAE E+GV KTRLWL+YLA
Sbjct:  225 LSRQQFDLAQEKIARLGLADRVTIEMKNFSDLKGGFDKIASIGMFEHVGIANHPTYFQTIHRLLRPGGVYLHHAITRPAKRTNRRFKRSSPEYRAIQKYIFPGGELDHIGMSTANLERYGFEVHDTEGWREHYARTCRHWHDRLLENRAAAEREVGVEKTRLWLLYLA 392          
BLAST of mRNA_P-wetherbeei_contig57862.1.1 vs. uniprot
Match: A0A2T1HMQ7_9HYPH (SAM-dependent methyltransferase n=2 Tax=Alsobacter TaxID=1502180 RepID=A0A2T1HMQ7_9HYPH)

HSP 1 Score: 249 bits (635), Expect = 1.640e-78
Identity = 118/168 (70.24%), Postives = 137/168 (81.55%), Query Frame = 1
Query:    1 LAKEKFDYAKARVARLGLQDRVTLELRDYALVEGSFDKISSIGMFEQVGIDNHATYFKTINRLLKPDGLYLHHAISRPAKRDDKAFRKQRPEYAALTRYIFPGGELDHLGMTIANLDRHGFEVHDVEGWREHYARTXRLWHDRLLSNIVAAEAEIGVHKTRLWLVYLA 504
            L++E+   A  + ARLGL DRVT+ELRDY  ++  FDKI+SIGMFE VGIDNHA YF TINRLL+P GLYLHHAISRPAK  DK FRK RPEY AL RYIFPGGELDH+GM+IAN++R   E+HDVEGWREHYART RLW +RL +N  AAEAE+G  KTR+WL+YLA
Sbjct:  233 LSQEQLALATEKAARLGLSDRVTIELRDYRALDQQFDKIASIGMFEHVGIDNHAAYFATINRLLRPRGLYLHHAISRPAKGSDKQFRKMRPEYKALVRYIFPGGELDHVGMSIANMERAKLEIHDVEGWREHYARTTRLWFERLNANRAAAEAEVGPEKTRMWLLYLA 400          
BLAST of mRNA_P-wetherbeei_contig57862.1.1 vs. uniprot
Match: UPI000832A96F (class I SAM-dependent methyltransferase n=1 Tax=Hyphomicrobiales TaxID=356 RepID=UPI000832A96F)

HSP 1 Score: 247 bits (630), Expect = 6.670e-78
Identity = 118/168 (70.24%), Postives = 136/168 (80.95%), Query Frame = 1
Query:    1 LAKEKFDYAKARVARLGLQDRVTLELRDYALVEGSFDKISSIGMFEQVGIDNHATYFKTINRLLKPDGLYLHHAISRPAKRDDKAFRKQRPEYAALTRYIFPGGELDHLGMTIANLDRHGFEVHDVEGWREHYARTXRLWHDRLLSNIVAAEAEIGVHKTRLWLVYLA 504
            LA+E+   A+ +V RLGLQ RVTL L+D+  +EG FDKISSIGMFE VGI NH TYFK +NRLLKP GLYLHH+ISR AK+ DKAF K   EY AL RYIFPGGELDHLGM+IANL+RHGFE+HDVEGWREHY RT RLW +RL +N   AEAEIG  +TR+WL+YLA
Sbjct:  229 LAEEQLALAREKVERLGLQGRVTLHLKDFTQMEGEFDKISSIGMFEHVGIRNHPTYFKAVNRLLKPRGLYLHHSISRRAKKTDKAFNKMPAEYRALVRYIFPGGELDHLGMSIANLERHGFEIHDVEGWREHYQRTTRLWWERLQANRAQAEAEIGPERTRMWLLYLA 396          
BLAST of mRNA_P-wetherbeei_contig57862.1.1 vs. uniprot
Match: A0A1N7A293_9HYPH (Cyclopropane-fatty-acyl-phospholipid synthase n=2 Tax=unclassified Bosea TaxID=2653178 RepID=A0A1N7A293_9HYPH)

HSP 1 Score: 246 bits (629), Expect = 1.140e-77
Identity = 117/168 (69.64%), Postives = 138/168 (82.14%), Query Frame = 1
Query:    1 LAKEKFDYAKARVARLGLQDRVTLELRDYALVEGSFDKISSIGMFEQVGIDNHATYFKTINRLLKPDGLYLHHAISRPAKRDDKAFRKQRPEYAALTRYIFPGGELDHLGMTIANLDRHGFEVHDVEGWREHYARTXRLWHDRLLSNIVAAEAEIGVHKTRLWLVYLA 504
            LA+E+  YA+ +VAR GL+ +VTL L+D+A +EG FDKISSIGMFE VGI NH TYF+ +NRLL+P GLYLHH I+R AK+ DKAFRK   EY AL RYIFPGGELDHLGM+IANL+RHGFEVHDVEGWREHY RT RLW +RL +N   AEAEIG  +TR+WL+YLA
Sbjct:  229 LAEEQLAYAREKVARWGLEGKVTLHLKDFAQMEGEFDKISSIGMFEHVGIANHPTYFRAVNRLLRPRGLYLHHTIARRAKKTDKAFRKMPAEYRALVRYIFPGGELDHLGMSIANLERHGFEVHDVEGWREHYQRTTRLWWERLDANKAKAEAEIGPERTRMWLLYLA 396          
BLAST of mRNA_P-wetherbeei_contig57862.1.1 vs. uniprot
Match: A0A1E4DQV1_9HYPH (Cyclopropane-fatty-acyl-phospholipid synthase n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1E4DQV1_9HYPH)

HSP 1 Score: 246 bits (627), Expect = 1.880e-77
Identity = 117/168 (69.64%), Postives = 137/168 (81.55%), Query Frame = 1
Query:    1 LAKEKFDYAKARVARLGLQDRVTLELRDYALVEGSFDKISSIGMFEQVGIDNHATYFKTINRLLKPDGLYLHHAISRPAKRDDKAFRKQRPEYAALTRYIFPGGELDHLGMTIANLDRHGFEVHDVEGWREHYARTXRLWHDRLLSNIVAAEAEIGVHKTRLWLVYLA 504
            LA+E+  +A+ +V RLGLQDRVTL L+D+  +EG FDKISSIGMFEQVGI NH TYF+ +NRLL+P GLYLHH ISR AK+ DKAF K   EY AL RYIFPGGELDHLGM+IANL+R+GFEVHDVEGWREHY RT RLW +RL +    AEAEIG  +TR+WL+YLA
Sbjct:  229 LAEEQLKFAREKVERLGLQDRVTLHLKDFTQMEGVFDKISSIGMFEQVGIRNHTTYFQAVNRLLRPRGLYLHHTISRRAKKTDKAFNKMPAEYRALVRYIFPGGELDHLGMSIANLERNGFEVHDVEGWREHYQRTTRLWWERLNARKAEAEAEIGAERTRMWLLYLA 396          
BLAST of mRNA_P-wetherbeei_contig57862.1.1 vs. uniprot
Match: A0A2W6YM66_9HYPH (SAM-dependent methyltransferase n=1 Tax=Chelatococcus sp. TaxID=1953771 RepID=A0A2W6YM66_9HYPH)

HSP 1 Score: 246 bits (627), Expect = 1.880e-77
Identity = 118/168 (70.24%), Postives = 135/168 (80.36%), Query Frame = 1
Query:    1 LAKEKFDYAKARVARLGLQDRVTLELRDYALVEGSFDKISSIGMFEQVGIDNHATYFKTINRLLKPDGLYLHHAISRPAKRDDKAFRKQRPEYAALTRYIFPGGELDHLGMTIANLDRHGFEVHDVEGWREHYARTXRLWHDRLLSNIVAAEAEIGVHKTRLWLVYLA 504
            L++E+   A+ +V RLGLQDRVTL LRD+  +EG FDKISSIGMFE VGI NH TYF+ +NRLL+P GLYLHH ISR AK+ DKAF K   EY AL RYIFPGGELDHLGM+IANL+RHGFEVHDVEGWREHY RT RLW +RL +N   AEAEIG  +TR WL+YLA
Sbjct:  229 LSEEQLALAREKVERLGLQDRVTLHLRDFTQMEGEFDKISSIGMFEHVGIANHPTYFRAVNRLLRPRGLYLHHCISRRAKKTDKAFNKMPAEYRALVRYIFPGGELDHLGMSIANLERHGFEVHDVEGWREHYQRTTRLWWERLEANKAKAEAEIGPERTRTWLLYLA 396          
BLAST of mRNA_P-wetherbeei_contig57862.1.1 vs. uniprot
Match: A0A651G5T0_9HYPH (Methyltransferase domain-containing protein n=1 Tax=Salinarimonadaceae bacterium TaxID=2448058 RepID=A0A651G5T0_9HYPH)

HSP 1 Score: 244 bits (622), Expect = 1.250e-76
Identity = 114/168 (67.86%), Postives = 134/168 (79.76%), Query Frame = 1
Query:    1 LAKEKFDYAKARVARLGLQDRVTLELRDYALVEGSFDKISSIGMFEQVGIDNHATYFKTINRLLKPDGLYLHHAISRPAKRDDKAFRKQRPEYAALTRYIFPGGELDHLGMTIANLDRHGFEVHDVEGWREHYARTXRLWHDRLLSNIVAAEAEIGVHKTRLWLVYLA 504
            LA E+  YA+ +V RLG++DRVT   +DYAL+EG FDKISSIGMFE VGI NHATYF T+NRLL+P GLYLHH I+R AK++D+ F K  PEY AL RYIFPGGELDHLGM+IANL+R GFE+HDVEGWREHY RT RLW DRL +    AEA +G  K R+WL+YLA
Sbjct:  233 LAAEQLAYAREKVKRLGIEDRVTFHFKDYALIEGQFDKISSIGMFEHVGIRNHATYFATVNRLLRPQGLYLHHTIARRAKKNDRRFLKMSPEYRALVRYIFPGGELDHLGMSIANLERAGFEIHDVEGWREHYQRTTRLWCDRLAARREEAEAMVGPEKVRMWLLYLA 400          
BLAST of mRNA_P-wetherbeei_contig57862.1.1 vs. uniprot
Match: A0A8I1QWP9_9HYPH (Class I SAM-dependent methyltransferase n=2 Tax=unclassified Bosea TaxID=2653178 RepID=A0A8I1QWP9_9HYPH)

HSP 1 Score: 243 bits (621), Expect = 1.550e-76
Identity = 117/168 (69.64%), Postives = 137/168 (81.55%), Query Frame = 1
Query:    1 LAKEKFDYAKARVARLGLQDRVTLELRDYALVEGSFDKISSIGMFEQVGIDNHATYFKTINRLLKPDGLYLHHAISRPAKRDDKAFRKQRPEYAALTRYIFPGGELDHLGMTIANLDRHGFEVHDVEGWREHYARTXRLWHDRLLSNIVAAEAEIGVHKTRLWLVYLA 504
            LA+E+  YA+ +V R GLQDRVTL LRDY  +EG FDKISSIGMFEQVGI N+ +YF T+NRLL+P GLYLHH ISR AK+ +KAF K   EY AL RYIFPGGELDHLGM+IANL+R+GFEVHDVEGWREHY RT RLW +RL +N   AEA+IG  +TR+WL+YLA
Sbjct:  229 LAEEQLKYAQEKVERWGLQDRVTLHLRDYTQMEGEFDKISSIGMFEQVGIRNYPSYFTTVNRLLRPRGLYLHHTISRRAKKTEKAFNKMPAEYRALVRYIFPGGELDHLGMSIANLERYGFEVHDVEGWREHYQRTTRLWWERLNANRDKAEAKIGAERTRMWLLYLA 396          
BLAST of mRNA_P-wetherbeei_contig57862.1.1 vs. uniprot
Match: UPI0013318EDC (cyclopropane-fatty-acyl-phospholipid synthase family protein n=1 Tax=Roseomonas harenae TaxID=2692566 RepID=UPI0013318EDC)

HSP 1 Score: 243 bits (620), Expect = 2.190e-76
Identity = 110/168 (65.48%), Postives = 144/168 (85.71%), Query Frame = 1
Query:    1 LAKEKFDYAKARVARLGLQDRVTLELRDYALVEGSFDKISSIGMFEQVGIDNHATYFKTINRLLKPDGLYLHHAISRPAKRDDKAFRKQRPEYAALTRYIFPGGELDHLGMTIANLDRHGFEVHDVEGWREHYARTXRLWHDRLLSNIVAAEAEIGVHKTRLWLVYLA 504
            L++ + D+A+A++ARLGLQDRVT+EL+DY  + G +DKI+SIGMFE VG+DNHA YF+ +  LL+P GL L+HAI+RPAK+D KAFR++RPE+AALT+YIFPGGELD++G+++ NL+RHGFEVHDVEGWREHY RT RLW +RL +N  AAE E+G  +TRLWL+YLA
Sbjct:  230 LSQAQLDFARAKIARLGLQDRVTVELKDYKELTGEYDKIASIGMFEHVGLDNHAAYFQHMRSLLRPRGLLLNHAIARPAKKDMKAFRRKRPEFAALTKYIFPGGELDYIGLSLTNLERHGFEVHDVEGWREHYGRTCRLWTERLHANREAAEREVGAGRTRLWLLYLA 397          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57862.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1M5CLC4_9HYPH6.670e-8069.64Cyclopropane-fatty-acyl-phospholipid synthase n=2 ... [more]
A0A431MB30_9BRAD1.060e-7866.07Class I SAM-dependent methyltransferase n=1 Tax=Br... [more]
A0A2T1HMQ7_9HYPH1.640e-7870.24SAM-dependent methyltransferase n=2 Tax=Alsobacter... [more]
UPI000832A96F6.670e-7870.24class I SAM-dependent methyltransferase n=1 Tax=Hy... [more]
A0A1N7A293_9HYPH1.140e-7769.64Cyclopropane-fatty-acyl-phospholipid synthase n=2 ... [more]
A0A1E4DQV1_9HYPH1.880e-7769.64Cyclopropane-fatty-acyl-phospholipid synthase n=3 ... [more]
A0A2W6YM66_9HYPH1.880e-7770.24SAM-dependent methyltransferase n=1 Tax=Chelatococ... [more]
A0A651G5T0_9HYPH1.250e-7667.86Methyltransferase domain-containing protein n=1 Ta... [more]
A0A8I1QWP9_9HYPH1.550e-7669.64Class I SAM-dependent methyltransferase n=2 Tax=un... [more]
UPI0013318EDC2.190e-7665.48cyclopropane-fatty-acyl-phospholipid synthase fami... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57862contigP-wetherbeei_contig57862:4..507 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog411684.HPDFL43_05415
PFAMsCMAS
Model size504
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K00574
Exons1
Evalue5.28e-76
EggNOG OGsCOG2230@1|root,COG2230@2|Bacteria,1MX3U@1224|Proteobacteria,2U1A0@28211|Alphaproteobacteria,43HS7@69277|Phyllobacteriaceae
EC2.1.1.79
DescriptionMycolic acid cyclopropane synthetase
Cds size504
COG categoryM
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186857.513073-CDS-P-wetherbeei_contig57862:3..5071683186857.513073-CDS-P-wetherbeei_contig57862:3..507Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig57862 4..507 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57862.1.1prot_P-wetherbeei_contig57862.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig57862 4..507 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig57862.1.1

>prot_P-wetherbeei_contig57862.1.1 ID=prot_P-wetherbeei_contig57862.1.1|Name=mRNA_P-wetherbeei_contig57862.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=168bp
LAKEKFDYAKARVARLGLQDRVTLELRDYALVEGSFDKISSIGMFEQVGI
DNHATYFKTINRLLKPDGLYLHHAISRPAKRDDKAFRKQRPEYAALTRYI
FPGGELDHLGMTIANLDRHGFEVHDVEGWREHYARTXRLWHDRLLSNIVA
AEAEIGVHKTRLWLVYLA
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mRNA from alignment at P-wetherbeei_contig57862:4..507-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig57862.1.1 ID=mRNA_P-wetherbeei_contig57862.1.1|Name=mRNA_P-wetherbeei_contig57862.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig57862:4..507- (Phaeothamnion wetherbeei SAG_119_79)
CTGGCGAAGGAGAAGTTCGATTACGCCAAGGCGCGCGTCGCGCGGCTCGG GCTGCAGGACCGCGTCACGCTGGAGTTGCGCGACTACGCGCTGGTCGAGG GCAGCTTCGACAAGATCAGTTCGATCGGCATGTTCGAGCAGGTCGGCATC GACAATCACGCGACCTATTTCAAGACCATCAACCGCCTGCTCAAGCCCGA CGGACTGTATTTGCATCACGCCATCAGCCGGCCGGCCAAGCGCGACGACA AGGCGTTCCGCAAGCAGCGGCCGGAATATGCCGCGCTCACGCGCTACATC TTTCCGGGCGGCGAACTCGATCACCTCGGCATGACCATCGCCAATCTCGA CCGCCACGGTTTCGAGGTCCACGACGTCGAAGGCTGGCGCGAGCATTATG CGCGGACCTGNCGGCTCTGGCACGACCGGCTGCTGTCCAACATCGTCGCG GCGGAGGCGGAGATCGGCGTGCACAAGACCCGGCTGTGGCTGGTCTATCT GGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig57862:4..507-

>mRNA_P-wetherbeei_contig57862.1.1 ID=mRNA_P-wetherbeei_contig57862.1.1|Name=mRNA_P-wetherbeei_contig57862.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig57862:4..507- (Phaeothamnion wetherbeei SAG_119_79)
CTGGCGAAGGAGAAGTTCGATTACGCCAAGGCGCGCGTCGCGCGGCTCGG
GCTGCAGGACCGCGTCACGCTGGAGTTGCGCGACTACGCGCTGGTCGAGG
GCAGCTTCGACAAGATCAGTTCGATCGGCATGTTCGAGCAGGTCGGCATC
GACAATCACGCGACCTATTTCAAGACCATCAACCGCCTGCTCAAGCCCGA
CGGACTGTATTTGCATCACGCCATCAGCCGGCCGGCCAAGCGCGACGACA
AGGCGTTCCGCAAGCAGCGGCCGGAATATGCCGCGCTCACGCGCTACATC
TTTCCGGGCGGCGAACTCGATCACCTCGGCATGACCATCGCCAATCTCGA
CCGCCACGGTTTCGAGGTCCACGACGTCGAAGGCTGGCGCGAGCATTATG
CGCGGACCTGNCGGCTCTGGCACGACCGGCTGCTGTCCAACATCGTCGCG
GCGGAGGCGGAGATCGGCGTGCACAAGACCCGGCTGTGGCTGGTCTATCT
GGCG
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