mRNA_P-wetherbeei_contig57836.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57836.1.1 vs. uniprot
Match: A0A521M2A4_9HYPH (CoA transferase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521M2A4_9HYPH) HSP 1 Score: 273 bits (699), Expect = 4.440e-89 Identity = 131/159 (82.39%), Postives = 138/159 (86.79%), Query Frame = 1
Query: 1 GTWYLNEGDISPRVPRSAHLSLAPVQTFPTADSWIFVMCMTHKFWLSLVEAMNRQDLLADPRFVDPGTRAANRAALTDALDPTFRTRTTAEWLTILNGLLPAAPVHRLDQALDSDFVRSTDMVSSVPHPAKGSLRVIANPIRIDGERLAQAACSPLGAD 477
G WYLNEGD+SPRVPRSAHLSLAPVQTFPT D WIF+MCMT KFWLSL EA+ R DLLADPRF DP RA NRA +TD LDPTFRTRTTAEWLT LNGLLPAAPV++LD ALDS F R T MVSSVPHP KG LRVIANPIR+DGERLAQAACSPLGAD
Sbjct: 211 GFWYLNEGDVSPRVPRSAHLSLAPVQTFPTKDGWIFIMCMTQKFWLSLCEALGRNDLLADPRFPDPNARAKNRAEMTDELDPTFRTRTTAEWLTRLNGLLPAAPVNKLDAALDSSFARETGMVSSVPHPVKGELRVIANPIRVDGERLAQAACSPLGAD 369
BLAST of mRNA_P-wetherbeei_contig57836.1.1 vs. uniprot
Match: A0A1H8WZ19_9PROT (Crotonobetainyl-CoA:carnitine CoA-transferase CaiB n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8WZ19_9PROT) HSP 1 Score: 271 bits (694), Expect = 3.140e-88 Identity = 129/164 (78.66%), Postives = 139/164 (84.76%), Query Frame = 1
Query: 1 GTWYLNEGDISPRVPRSAHLSLAPVQTFPTADSWIFVMCMTHKFWLSLVEAMNRQDLLADPRFVDPGTRAANRAALTDALDPTFRTRTTAEWLTILNGLLPAAPVHRLDQALDSDFVRSTDMVSSVPHPAKGSLRVIANPIRIDGERLAQAACSPLGADTVTFV 492
G WYLNEGD+SPRVPRSAHLSLAPVQTFPT D WIFVMCMT KFWLSLV+AM R+ LL DPRF DP TRA +RAAL+DALDPTFR RTT WL NGLLPAAPVHRLDQALDS F R T MVS+VPHP KGSLRV+ANP+RIDGERL Q+ACSPLGAD T +
Sbjct: 218 GVWYLNEGDVSPRVPRSAHLSLAPVQTFPTKDGWIFVMCMTQKFWLSLVKAMGRETLLGDPRFADPNTRAVHRAALSDALDPTFRARTTEAWLAAFNGLLPAAPVHRLDQALDSGFARDTGMVSAVPHPVKGSLRVLANPLRIDGERLEQSACSPLGADNDTLL 381
BLAST of mRNA_P-wetherbeei_contig57836.1.1 vs. uniprot
Match: A0A521LBG7_9HYPH (CoA transferase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LBG7_9HYPH) HSP 1 Score: 267 bits (682), Expect = 1.820e-86 Identity = 127/164 (77.44%), Postives = 137/164 (83.54%), Query Frame = 1
Query: 1 GTWYLNEGDISPRVPRSAHLSLAPVQTFPTADSWIFVMCMTHKFWLSLVEAMNRQDLLADPRFVDPGTRAANRAALTDALDPTFRTRTTAEWLTILNGLLPAAPVHRLDQALDSDFVRSTDMVSSVPHPAKGSLRVIANPIRIDGERLAQAACSPLGADTVTFV 492
G WYLNEGD+SPRV RSAHLSLAPVQTFPT D WIF+MCMT KFWLSL EAM R DL+ DPRF DP TRA NRA LTDALDPTFRT+TT EWL + NGLLPAAPVHRLDQALDS F R + MVSSVPHP KG+LR IANPIRIDGERL QAAC+ LGAD ++
Sbjct: 217 GAWYLNEGDVSPRVSRSAHLSLAPVQTFPTKDGWIFIMCMTQKFWLSLCEAMGRGDLVKDPRFPDPNTRARNRAELTDALDPTFRTKTTTEWLALFNGLLPAAPVHRLDQALDSGFARESGMVSSVPHPVKGTLRTIANPIRIDGERLEQAACASLGADNKKYL 380
BLAST of mRNA_P-wetherbeei_contig57836.1.1 vs. uniprot
Match: A0A1T4SZ79_9HYPH (Crotonobetainyl-CoA:carnitine CoA-transferase CaiB n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4SZ79_9HYPH) HSP 1 Score: 266 bits (681), Expect = 2.500e-86 Identity = 127/164 (77.44%), Postives = 138/164 (84.15%), Query Frame = 1
Query: 1 GTWYLNEGDISPRVPRSAHLSLAPVQTFPTADSWIFVMCMTHKFWLSLVEAMNRQDLLADPRFVDPGTRAANRAALTDALDPTFRTRTTAEWLTILNGLLPAAPVHRLDQALDSDFVRSTDMVSSVPHPAKGSLRVIANPIRIDGERLAQAACSPLGADTVTFV 492
G WYLNEGD+SPRVPRSAHLSLAPVQTFPT D WIF+MCMT KFWL+L EAM R+DLL+DPRF DP RA +RA LTDALDPTFR RTTA+WL NGLLPAAPVHRLD ALDS F R+ MVSSV HP KG LRV+ANPIRIDGER AQAACSPLGAD T++
Sbjct: 213 GVWYLNEGDVSPRVPRSAHLSLAPVQTFPTRDGWIFIMCMTQKFWLALCEAMGRRDLLSDPRFPDPNARARHRAELTDALDPTFRERTTAQWLERFNGLLPAAPVHRLDAALDSGFARAAGMVSSVSHPTKGELRVLANPIRIDGERPAQAACSPLGADNATYL 376
BLAST of mRNA_P-wetherbeei_contig57836.1.1 vs. uniprot
Match: A0A521QLT4_9HYPH (CoA transferase n=2 Tax=Reyranella TaxID=445219 RepID=A0A521QLT4_9HYPH) HSP 1 Score: 265 bits (677), Expect = 1.010e-85 Identity = 126/159 (79.25%), Postives = 138/159 (86.79%), Query Frame = 1
Query: 1 GTWYLNEGDISPRVPRSAHLSLAPVQTFPTADSWIFVMCMTHKFWLSLVEAMNRQDLLADPRFVDPGTRAANRAALTDALDPTFRTRTTAEWLTILNGLLPAAPVHRLDQALDSDFVRSTDMVSSVPHPAKGSLRVIANPIRIDGERLAQAACSPLGAD 477
G WYLNEGD+S RVPRSAHLSLAPVQTFPT D WIF+MCMT KFWLSL +AM R DLL DPRF DP TRA NRAA+T+ALDPTFRT TTAEWL+ LNGLLPAAPVHRLDQALDS F R+ MVS+VPHPAKG LRV+ANP+RIDG+R +QAACS LGAD
Sbjct: 213 GLWYLNEGDVSSRVPRSAHLSLAPVQTFPTKDGWIFIMCMTQKFWLSLCQAMGRTDLLNDPRFADPNTRATNRAAMTEALDPTFRTHTTAEWLSKLNGLLPAAPVHRLDQALDSSFARAAGMVSAVPHPAKGELRVLANPLRIDGQRPSQAACSLLGAD 371
BLAST of mRNA_P-wetherbeei_contig57836.1.1 vs. uniprot
Match: A0A1Q3LNZ0_9PROT (CoA transferase n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3LNZ0_9PROT) HSP 1 Score: 264 bits (675), Expect = 2.270e-85 Identity = 125/164 (76.22%), Postives = 140/164 (85.37%), Query Frame = 1
Query: 1 GTWYLNEGDISPRVPRSAHLSLAPVQTFPTADSWIFVMCMTHKFWLSLVEAMNRQDLLADPRFVDPGTRAANRAALTDALDPTFRTRTTAEWLTILNGLLPAAPVHRLDQALDSDFVRSTDMVSSVPHPAKGSLRVIANPIRIDGERLAQAACSPLGADTVTFV 492
G WYLNEGD+SPRVPRSAHLSLAPVQTFPTAD WIF+MCMT KFWL+L +A+ L+ADPRF DPG RA NRAALT+ALDP FRTRTTA WL LNG+LPAAPVHRLDQALDS F R++ MVSSVPHPAKG LRV+ANP+RIDG R AQAAC+PLGAD + +
Sbjct: 217 GLWYLNEGDVSPRVPRSAHLSLAPVQTFPTADGWIFIMCMTQKFWLALCQALGCDVLVADPRFADPGLRAKNRAALTEALDPVFRTRTTAAWLGALNGILPAAPVHRLDQALDSSFARASGMVSSVPHPAKGELRVLANPLRIDGARPAQAACAPLGADNESLL 380
BLAST of mRNA_P-wetherbeei_contig57836.1.1 vs. uniprot
Match: A0A259MR51_9PROT (CoA transferase n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MR51_9PROT) HSP 1 Score: 260 bits (664), Expect = 1.020e-83 Identity = 124/159 (77.99%), Postives = 134/159 (84.28%), Query Frame = 1
Query: 1 GTWYLNEGDISPRVPRSAHLSLAPVQTFPTADSWIFVMCMTHKFWLSLVEAMNRQDLLADPRFVDPGTRAANRAALTDALDPTFRTRTTAEWLTILNGLLPAAPVHRLDQALDSDFVRSTDMVSSVPHPAKGSLRVIANPIRIDGERLAQAACSPLGAD 477
G WYLNEGD+SPRVPRSAHLSLAPVQTFPT D WI+VMCMT KFWL+L E M+R DL DPRF DP TRA NRA L+ LD TFRTRTTAEWL +NGLLPAAPV+RLDQALDS F R T MVSSVPHP KG LR++ANP+RIDGERLAQAACS LGAD
Sbjct: 216 GLWYLNEGDVSPRVPRSAHLSLAPVQTFPTKDGWIYVMCMTQKFWLALCEVMDRGDLAVDPRFPDPNTRAKNRATLSAELDVTFRTRTTAEWLATMNGLLPAAPVYRLDQALDSSFARETGMVSSVPHPVKGELRILANPLRIDGERLAQAACSSLGAD 374
BLAST of mRNA_P-wetherbeei_contig57836.1.1 vs. uniprot
Match: A0A1M6W3E6_9BRAD (Crotonobetainyl-CoA:carnitine CoA-transferase CaiB n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=A0A1M6W3E6_9BRAD) HSP 1 Score: 202 bits (514), Expect = 4.740e-61 Identity = 96/163 (58.90%), Postives = 120/163 (73.62%), Query Frame = 1
Query: 4 TWYLNEGDISPRVPRSAHLSLAPVQTFPTADSWIFVMCMTHKFWLSLVEAMNRQDLLADPRFVDPGTRAANRAALTDALDPTFRTRTTAEWLTILNGLLPAAPVHRLDQALDSDFVRSTDMVSSVPHPAKGSLRVIANPIRIDGERLAQAACSPLGADTVTFV 492
TWYLNEG +S R RSAH S+APVQTFPTAD W+F+MCMT KFW V A+ + DLLADPRF TR ANR ALT+ +D +TTA WL NG+LP APV L QALD+ F+++TDM++ + HPAK +RV+ANPI+I+G+RL+QA CSP GAD +V
Sbjct: 215 TWYLNEGHVSMRQRRSAHYSVAPVQTFPTADGWLFIMCMTDKFWNEFVGAIGKADLLADPRFATMTTRQANRDALTEIIDRELSKQTTAYWLGKFNGVLPVAPVLDLAQALDNPFLKTTDMINVISHPAKPEMRVLANPIKINGQRLSQAPCSPFGADNAAYV 377
BLAST of mRNA_P-wetherbeei_contig57836.1.1 vs. uniprot
Match: UPI001BAD38C8 (CoA transferase n=2 Tax=Roseomonas hellenica TaxID=2687306 RepID=UPI001BAD38C8) HSP 1 Score: 202 bits (513), Expect = 5.590e-61 Identity = 98/162 (60.49%), Postives = 114/162 (70.37%), Query Frame = 1
Query: 7 WYLNEGDISPRVPRSAHLSLAPVQTFPTADSWIFVMCMTHKFWLSLVEAMNRQDLLADPRFVDPGTRAANRAALTDALDPTFRTRTTAEWLTILNGLLPAAPVHRLDQALDSDFVRSTDMVSSVPHPAKGSLRVIANPIRIDGERLAQAACSPLGADTVTFV 492
WYLNEGD S R+ RS+HLSL PVQTFPTAD WIFVMCMT KFW E + R DL DPRF R N+AALT LD R TA WL IL GLLP APV L +ALDSDFVR+ MV S+PHPAK +++V+ANP++IDG R Q+AC+PLGAD +
Sbjct: 215 WYLNEGDASRRLARSSHLSLVPVQTFPTADGWIFVMCMTEKFWQLFCEGIGRPDLPEDPRFAGFTARRENQAALTAVLDAVLRQAPTAHWLKILGGLLPVAPVKDLAEALDSDFVRAKGMVQSIPHPAKSAMKVLANPLKIDGVRPTQSACAPLGADNAALL 376
BLAST of mRNA_P-wetherbeei_contig57836.1.1 vs. uniprot
Match: A0A4Q8QWC2_9BRAD (CoA transferase n=1 Tax=Bradyrhizobium sp. Leo170 TaxID=1571199 RepID=A0A4Q8QWC2_9BRAD) HSP 1 Score: 198 bits (503), Expect = 2.120e-59 Identity = 92/163 (56.44%), Postives = 122/163 (74.85%), Query Frame = 1
Query: 4 TWYLNEGDISPRVPRSAHLSLAPVQTFPTADSWIFVMCMTHKFWLSLVEAMNRQDLLADPRFVDPGTRAANRAALTDALDPTFRTRTTAEWLTILNGLLPAAPVHRLDQALDSDFVRSTDMVSSVPHPAKGSLRVIANPIRIDGERLAQAACSPLGADTVTFV 492
TWYLNE IS R PRSAH S+APVQTFPT+D W+F+MCMT KFW L++A+ R+DL +DPRF R ANR LT +D R +T+ WL LNG+LP APV L QALD+ F++++ M++++ HPAK ++RV+ANPI+I+G+R +QAACSP GAD T+V
Sbjct: 215 TWYLNESHISSRQPRSAHYSVAPVQTFPTSDGWLFIMCMTDKFWGELIKAIERKDLASDPRFATQALRQANRDELTSIIDADMRRHSTSYWLGKLNGVLPVAPVLDLAQALDNPFLQTSGMINAISHPAKPNMRVLANPIKINGQRPSQAACSPYGADNPTYV 377 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57836.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57836.1.1 >prot_P-wetherbeei_contig57836.1.1 ID=prot_P-wetherbeei_contig57836.1.1|Name=mRNA_P-wetherbeei_contig57836.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp GTWYLNEGDISPRVPRSAHLSLAPVQTFPTADSWIFVMCMTHKFWLSLVEback to top mRNA from alignment at P-wetherbeei_contig57836:2..493+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57836.1.1 ID=mRNA_P-wetherbeei_contig57836.1.1|Name=mRNA_P-wetherbeei_contig57836.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig57836:2..493+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57836:2..493+ >mRNA_P-wetherbeei_contig57836.1.1 ID=mRNA_P-wetherbeei_contig57836.1.1|Name=mRNA_P-wetherbeei_contig57836.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig57836:2..493+ (Phaeothamnion wetherbeei SAG_119_79)back to top |