mRNA_P-wetherbeei_contig57710.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig57710.1.1
Unique NamemRNA_P-wetherbeei_contig57710.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig57710.1.1 vs. uniprot
Match: A0A7S0HUU7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HUU7_9CRYP)

HSP 1 Score: 159 bits (402), Expect = 9.560e-44
Identity = 69/76 (90.79%), Postives = 74/76 (97.37%), Query Frame = 1
Query:   55 AAESLTCEYQWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKALACVVAHEIAHSWSGNLVTNATWSHFWLNE 282
            AAESLTCEYQWGRYD+LCLPPSFPYGGMENPCLTFVTPTLL+GD++LA VVAHEIAHSW+GNLVTNATW HFWLNE
Sbjct:  247 AAESLTCEYQWGRYDLLCLPPSFPYGGMENPCLTFVTPTLLAGDRSLADVVAHEIAHSWTGNLVTNATWEHFWLNE 322          
BLAST of mRNA_P-wetherbeei_contig57710.1.1 vs. uniprot
Match: A0A7S0W8K5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W8K5_9CRYP)

HSP 1 Score: 153 bits (387), Expect = 2.430e-43
Identity = 65/77 (84.42%), Postives = 72/77 (93.51%), Query Frame = 1
Query:   52 QAAESLTCEYQWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKALACVVAHEIAHSWSGNLVTNATWSHFWLNE 282
            + AESLTC YQWGRYDVLCLPPSFPYGGMENPCLTFVTPTLL+GD++LA V+AHEI+HSW+GNLVTN TW HFWLNE
Sbjct:  255 KTAESLTCPYQWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLAGDRSLADVIAHEISHSWTGNLVTNETWEHFWLNE 331          
BLAST of mRNA_P-wetherbeei_contig57710.1.1 vs. uniprot
Match: A0A7S4URF4_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4URF4_GUITH)

HSP 1 Score: 157 bits (396), Expect = 7.400e-43
Identity = 67/75 (89.33%), Postives = 73/75 (97.33%), Query Frame = 1
Query:   58 AESLTCEYQWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKALACVVAHEIAHSWSGNLVTNATWSHFWLNE 282
            AES+TCEYQWGRYD+LCLPPSFPYGGMENPCLTFVTPTLL+GD++LA VVAHEIAHSW+GNLVTNATW HFWLNE
Sbjct:  262 AESITCEYQWGRYDLLCLPPSFPYGGMENPCLTFVTPTLLAGDRSLADVVAHEIAHSWTGNLVTNATWEHFWLNE 336          
BLAST of mRNA_P-wetherbeei_contig57710.1.1 vs. uniprot
Match: A0A7S2DSI6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DSI6_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.760e-42
Identity = 63/77 (81.82%), Postives = 70/77 (90.91%), Query Frame = 1
Query:   52 QAAESLTCEYQWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKALACVVAHEIAHSWSGNLVTNATWSHFWLNE 282
            + AE L   Y+W RYDVLCLPPSFP+GGMENPCLTFVTPTLL+GDK+LA VVAHEIAHSW+GNLVTNATW+HFWLNE
Sbjct:   56 KVAEDLAGPYRWTRYDVLCLPPSFPFGGMENPCLTFVTPTLLAGDKSLADVVAHEIAHSWTGNLVTNATWTHFWLNE 132          
BLAST of mRNA_P-wetherbeei_contig57710.1.1 vs. uniprot
Match: A0A6U4S5G1_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4S5G1_HEMAN)

HSP 1 Score: 153 bits (386), Expect = 1.720e-41
Identity = 64/77 (83.12%), Postives = 72/77 (93.51%), Query Frame = 1
Query:   52 QAAESLTCEYQWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKALACVVAHEIAHSWSGNLVTNATWSHFWLNE 282
            + AESLTC YQWGRYDVLCLPPSFPYGGMENPCLTFVTPTLL+GD++LA V+AHEI+HSW+GNL+TN TW HFWLNE
Sbjct:  246 RTAESLTCPYQWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLAGDRSLADVIAHEISHSWTGNLITNETWEHFWLNE 322          
BLAST of mRNA_P-wetherbeei_contig57710.1.1 vs. uniprot
Match: D7FKC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKC5_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 2.210e-40
Identity = 64/76 (84.21%), Postives = 69/76 (90.79%), Query Frame = 1
Query:   55 AAESLTCEYQWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKALACVVAHEIAHSWSGNLVTNATWSHFWLNE 282
            AAE L   Y+WGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDK+LA V+AHEI+HSW+GNLVTN TW HFWLNE
Sbjct:  224 AAEGLAGPYEWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKSLAFVIAHEISHSWTGNLVTNRTWEHFWLNE 299          
BLAST of mRNA_P-wetherbeei_contig57710.1.1 vs. uniprot
Match: B8CCL2_THAPS (Leuk-A4-hydro_C domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCL2_THAPS)

HSP 1 Score: 149 bits (377), Expect = 2.840e-40
Identity = 65/76 (85.53%), Postives = 69/76 (90.79%), Query Frame = 1
Query:   55 AAESLTCEYQWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKALACVVAHEIAHSWSGNLVTNATWSHFWLNE 282
            AAE LT  YQWGRYD+LCLPPSFPYGGMENPCLTFVTPTLL+GD++LA VVAHE AHSWSGNLVTN TW HFWLNE
Sbjct:  253 AAEELTMPYQWGRYDILCLPPSFPYGGMENPCLTFVTPTLLAGDRSLADVVAHEAAHSWSGNLVTNETWEHFWLNE 328          
BLAST of mRNA_P-wetherbeei_contig57710.1.1 vs. uniprot
Match: L1JJV1_GUITC (Leuk-A4-hydro_C domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JJV1_GUITC)

HSP 1 Score: 149 bits (377), Expect = 2.940e-40
Identity = 66/78 (84.62%), Postives = 72/78 (92.31%), Query Frame = 1
Query:   58 AESLTCEYQWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKALACVVAHEIAHS---WSGNLVTNATWSHFWLNE 282
            AES+TCEYQWGRYD+LCLPPSFPYGGMENPCLTFVTPTLL+GD++LA VVAHEIAH    W+GNLVTNATW HFWLNE
Sbjct:  238 AESITCEYQWGRYDLLCLPPSFPYGGMENPCLTFVTPTLLAGDRSLADVVAHEIAHRHLRWTGNLVTNATWEHFWLNE 315          
BLAST of mRNA_P-wetherbeei_contig57710.1.1 vs. uniprot
Match: A0A482SC76_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SC76_9ARCH)

HSP 1 Score: 146 bits (368), Expect = 3.810e-40
Identity = 63/78 (80.77%), Postives = 71/78 (91.03%), Query Frame = 1
Query:   52 QAAESLT-CEYQWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKALACVVAHEIAHSWSGNLVTNATWSHFWLNE 282
            QAAE++T C YQWGRYDVLCLPPSFPYGG ENPCLTF TPTLL+GD++L+ V+AHEIAHSW GNLVTN+TW HFWLNE
Sbjct:  260 QAAEAITGCAYQWGRYDVLCLPPSFPYGGTENPCLTFATPTLLAGDRSLSGVIAHEIAHSWMGNLVTNSTWDHFWLNE 337          
BLAST of mRNA_P-wetherbeei_contig57710.1.1 vs. uniprot
Match: A0A0H5R867_9EUKA (Leuk-A4-hydro_C domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R867_9EUKA)

HSP 1 Score: 148 bits (374), Expect = 4.730e-40
Identity = 65/77 (84.42%), Postives = 70/77 (90.91%), Query Frame = 1
Query:   52 QAAESLTCEYQWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKALACVVAHEIAHSWSGNLVTNATWSHFWLNE 282
            +AAES+   Y WGRYD+LCLPPSFPYGGMENPCLTFVTPTLL+GDK+LA VVAHEIAHSW GNLVTNATW HFWLNE
Sbjct:  241 KAAESICGRYVWGRYDILCLPPSFPYGGMENPCLTFVTPTLLTGDKSLANVVAHEIAHSWHGNLVTNATWEHFWLNE 317          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57710.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0HUU7_9CRYP9.560e-4490.79Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S0W8K5_9CRYP2.430e-4384.42Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S4URF4_GUITH7.400e-4389.33Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S2DSI6_9STRA1.760e-4281.82Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A6U4S5G1_HEMAN1.720e-4183.12Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
D7FKC5_ECTSI2.210e-4084.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
B8CCL2_THAPS2.840e-4085.53Leuk-A4-hydro_C domain-containing protein n=1 Tax=... [more]
L1JJV1_GUITC2.940e-4084.62Leuk-A4-hydro_C domain-containing protein n=1 Tax=... [more]
A0A482SC76_9ARCH3.810e-4080.77Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A0H5R867_9EUKA4.730e-4084.42Leuk-A4-hydro_C domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57710contigP-wetherbeei_contig57710:97..378 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog35128.Thaps269777
PFAMsLeuk-A4-hydro_C,Peptidase_M1
Model size282
Max annot lvl2836|Bacillariophyta
KEGG rclassRC00838
KEGG koko:K01254
KEGG ReactionR03057
KEGG Pathwayko00590,ko01100,map00590,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.66e-41
EggNOG OGsCOG0308@1|root,KOG1047@2759|Eukaryota,2XAD6@2836|Bacillariophyta
EC3.3.2.6
DescriptionLeukotriene A4 hydrolase, C-terminal
Cds size282
COG categoryEIOV
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186855.6101077-CDS-P-wetherbeei_contig57710:96..3781683186855.6101077-CDS-P-wetherbeei_contig57710:96..378Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig57710 97..378 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57710.1.1prot_P-wetherbeei_contig57710.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig57710 97..378 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig57710.1.1

>prot_P-wetherbeei_contig57710.1.1 ID=prot_P-wetherbeei_contig57710.1.1|Name=mRNA_P-wetherbeei_contig57710.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=94bp
QQSVDSCVSSSPIPVLSQAAESLTCEYQWGRYDVLCLPPSFPYGGMENPC
LTFVTPTLLSGDKALACVVAHEIAHSWSGNLVTNATWSHFWLNE
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mRNA from alignment at P-wetherbeei_contig57710:97..378-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig57710.1.1 ID=mRNA_P-wetherbeei_contig57710.1.1|Name=mRNA_P-wetherbeei_contig57710.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=282bp|location=Sequence derived from alignment at P-wetherbeei_contig57710:97..378- (Phaeothamnion wetherbeei SAG_119_79)
CAGCAATCCGTCGATTCTTGTGTTTCCTCCTCACCCATTCCCGTCTTGTC TCAGGCTGCGGAGTCGCTGACATGCGAGTACCAGTGGGGCCGCTACGACG TGCTGTGCCTGCCGCCGTCATTCCCTTACGGCGGCATGGAGAACCCGTGC CTCACCTTTGTCACCCCGACGCTGCTGTCGGGCGACAAGGCTCTCGCTTG CGTGGTGGCGCACGAGATTGCCCACAGCTGGAGCGGAAACCTCGTCACCA ACGCTACCTGGTCCCACTTCTGGCTCAACGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig57710:97..378-

>mRNA_P-wetherbeei_contig57710.1.1 ID=mRNA_P-wetherbeei_contig57710.1.1|Name=mRNA_P-wetherbeei_contig57710.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=282bp|location=Sequence derived from alignment at P-wetherbeei_contig57710:97..378- (Phaeothamnion wetherbeei SAG_119_79)
CAGCAATCCGTCGATTCTTGTGTTTCCTCCTCACCCATTCCCGTCTTGTC
TCAGGCTGCGGAGTCGCTGACATGCGAGTACCAGTGGGGCCGCTACGACG
TGCTGTGCCTGCCGCCGTCATTCCCTTACGGCGGCATGGAGAACCCGTGC
CTCACCTTTGTCACCCCGACGCTGCTGTCGGGCGACAAGGCTCTCGCTTG
CGTGGTGGCGCACGAGATTGCCCACAGCTGGAGCGGAAACCTCGTCACCA
ACGCTACCTGGTCCCACTTCTGGCTCAACGAG
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