mRNA_P-wetherbeei_contig5768.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5768.3.1
Unique NamemRNA_P-wetherbeei_contig5768.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5768.3.1 vs. uniprot
Match: D8LL08_ECTSI (IPPc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL08_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 8.210e-14
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query:   10 LRIFCGTWNVAGRILETHEQLEEWLGIEASEEEGRA---PDVFAIGLQEVVELSAQNVVL 180
            LR+FCGTWNVAGR L++ E +  WL ++  +EEG     PDVF IG QEVVELSAQNVV+
Sbjct:  253 LRVFCGTWNVAGRKLDSAEDMGLWLDVDKLDEEGDTSVPPDVFVIGFQEVVELSAQNVVM 312          
BLAST of mRNA_P-wetherbeei_contig5768.3.1 vs. uniprot
Match: A0A6H5L6C6_9PHAE (IPPc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6C6_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.120e-13
Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 1
Query:   10 LRIFCGTWNVAGRILETHEQLEEWLGIEASEEEGRA---PDVFAIGLQEVVELSAQNVVL 180
            LR+FCGTWNVAGR L++ E +  WL ++  +EEG     PD+F IG QEVVELSAQNVV+
Sbjct:  200 LRVFCGTWNVAGRKLDSAEDMGLWLDVDKLDEEGDTSVPPDIFVIGFQEVVELSAQNVVM 259          
BLAST of mRNA_P-wetherbeei_contig5768.3.1 vs. uniprot
Match: A0A835Z928_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z928_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 5.380e-13
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 1
Query:    4 MRLRIFCGTWNVAGRILETHEQLEEWLGIEASEEEGRAPDVFAIGLQEVVELSAQNVV 177
            + LRIF GTWN+AG +L T E LEEWLG++    E   PD+FAIG QEV++LSA NVV
Sbjct:  115 LSLRIFAGTWNIAGEMLSTAEDLEEWLGVDVCPGES-PPDLFAIGFQEVIDLSAGNVV 171          
BLAST of mRNA_P-wetherbeei_contig5768.3.1 vs. uniprot
Match: A0A7R9U3C0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3C0_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.400e-6
Identity = 26/57 (45.61%), Postives = 36/57 (63.16%), Query Frame = 1
Query:   10 LRIFCGTWNVAGRILETHEQLEEWLGIEASEEEGRAPDVFAIGLQEVVELSAQNVVL 180
            +RIFCGTWNV G++ E +  L  W+           PD+  IGLQE+V+LSA NV++
Sbjct:    4 VRIFCGTWNVNGKVEEDYYGLGNWINCGLDP----VPDMLVIGLQEMVDLSAVNVMM 56          
BLAST of mRNA_P-wetherbeei_contig5768.3.1 vs. uniprot
Match: A0A7S0AKS2_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0AKS2_9DINO)

HSP 1 Score: 52.0 bits (123), Expect = 3.230e-6
Identity = 28/52 (53.85%), Postives = 34/52 (65.38%), Query Frame = 1
Query:   10 LRIFCGTWNVAGRILETHEQLEEWL--GIEASEEEGRAPDVFAIGLQEVVEL 159
            L I CGTWN+ G++  +HE L EWL  G   SE    APDV A+GLQE+V L
Sbjct:   66 LSILCGTWNLMGQLPSSHEALSEWLLAGCGPSE----APDVLALGLQELVRL 113          
BLAST of mRNA_P-wetherbeei_contig5768.3.1 vs. uniprot
Match: A0A068RMM7_9FUNG (Phosphoinositide 5-phosphatase n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RMM7_9FUNG)

HSP 1 Score: 51.6 bits (122), Expect = 4.540e-6
Identity = 25/56 (44.64%), Postives = 40/56 (71.43%), Query Frame = 1
Query:    7 RLRIFCGTWNVAGRILETHEQLEEWLGIEASEEEGRAPDVFAIGLQEVVELSAQNV 174
            ++ IFCGT+N+ G+  +  E L+ WL ++ S+ +G  PD++A+G QE+VELS Q V
Sbjct:  583 KVSIFCGTYNLNGKSFKG-ESLDPWL-LQHSQWDGEEPDIYAVGFQEIVELSPQQV 636          
BLAST of mRNA_P-wetherbeei_contig5768.3.1 vs. uniprot
Match: A0A168SPL7_ABSGL (Phosphoinositide 5-phosphatase n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168SPL7_ABSGL)

HSP 1 Score: 50.8 bits (120), Expect = 8.490e-6
Identity = 25/58 (43.10%), Postives = 38/58 (65.52%), Query Frame = 1
Query:    1 TMRLRIFCGTWNVAGRILETHEQLEEWLGIEASEEEGRAPDVFAIGLQEVVELSAQNV 174
            T ++ IFCGT+N+ G+  +  E+L+ WL       + + PD++AIG QE+VELS Q V
Sbjct:  608 TQQILIFCGTYNLNGKSFKG-EKLDPWLLQHTRWNQAKEPDIYAIGFQEIVELSPQQV 664          
BLAST of mRNA_P-wetherbeei_contig5768.3.1 vs. uniprot
Match: A0A7S2D7I2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D7I2_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 1.040e-5
Identity = 25/55 (45.45%), Postives = 32/55 (58.18%), Query Frame = 1
Query:   10 LRIFCGTWNVAGRILETHEQLEEWLGIEASEEEGRAPDVFAIGLQEVVELSAQNV 174
            L + C TWNV G+  +  E L  WL       EG  PD+F IG QE+V+L+A NV
Sbjct:    8 LGVLCATWNVNGKKPDPEEDLSLWL----KHHEGPPPDIFCIGFQEIVDLTAVNV 58          
BLAST of mRNA_P-wetherbeei_contig5768.3.1 vs. uniprot
Match: A0A7J7EHE4_DICBM (Phosphoinositide 5-phosphatase n=2 Tax=Rhinocerotidae TaxID=9803 RepID=A0A7J7EHE4_DICBM)

HSP 1 Score: 50.1 bits (118), Expect = 1.590e-5
Identity = 31/70 (44.29%), Postives = 42/70 (60.00%), Query Frame = 1
Query:    7 RLRIFCGTWNVAG------RILETHEQLEEWL-------GIEASEEEGRAPDVFAIGLQEVVELSAQNVV 177
            RLRI  GTWNV G       +L T E L +WL       G+E S+++    D+FA+G +E+VELSA N+V
Sbjct:  254 RLRIAMGTWNVNGGKQFRSNLLGTGE-LADWLLDSPTLSGVEESQDDSSPADIFAVGFEEMVELSAGNIV 322          
BLAST of mRNA_P-wetherbeei_contig5768.3.1 vs. uniprot
Match: A0A388KSQ4_CHABU (IPPc domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KSQ4_CHABU)

HSP 1 Score: 50.1 bits (118), Expect = 1.590e-5
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 1
Query:   10 LRIFCGTWNVAGRILETHEQLEEWLGIEASEEEGRAPDVFAIGLQEVVELSAQNVV 177
            +RIF G+WNVAGR+  T    +EWL +E         D++ +G QEVV L+A NV+
Sbjct:   96 VRIFVGSWNVAGRVPSTDLHFDEWLIVEDP------ADLYVLGFQEVVPLNASNVI 145          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5768.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL08_ECTSI8.210e-1461.67IPPc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L6C6_9PHAE1.120e-1360.00IPPc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835Z928_9STRA5.380e-1360.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9U3C0_9STRA2.400e-645.61Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0AKS2_9DINO3.230e-653.85Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]
A0A068RMM7_9FUNG4.540e-644.64Phosphoinositide 5-phosphatase n=2 Tax=Lichtheimia... [more]
A0A168SPL7_ABSGL8.490e-643.10Phosphoinositide 5-phosphatase n=1 Tax=Absidia gla... [more]
A0A7S2D7I2_9STRA1.040e-545.45Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7J7EHE4_DICBM1.590e-544.29Phosphoinositide 5-phosphatase n=2 Tax=Rhinoceroti... [more]
A0A388KSQ4_CHABU1.590e-544.64IPPc domain-containing protein n=1 Tax=Chara braun... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5768contigP-wetherbeei_contig5768:3331..3510 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LL08
PFAMsExo_endo_phos
Model size180
Max annot lvl2759|Eukaryota
KEGG rclassRC00010,RC00078
KEGG koko:K01099,ko:K01974,ko:K12819,ko:K13566,ko:K20279
KEGG ReactionR00269,R00348,R04404,R09827
KEGG Pathwayko00250,ko00562,ko01100,ko03040,ko04070,map00250,map00562,map01100,map03040,map04070
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue9.44e-15
EggNOG OGsCOG5411@1|root,KOG0565@2759|Eukaryota,KOG0566@2759|Eukaryota
EC3.1.3.36,3.5.1.3,6.5.1.4
Descriptionphosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
Cds size177
COG categoryT
BRITEko00000,ko00001,ko01000,ko03041,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186855.2019358-UTR-P-wetherbeei_contig5768:3330..33331683186855.2019358-UTR-P-wetherbeei_contig5768:3330..3333Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5768 3331..3333 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186855.2140782-CDS-P-wetherbeei_contig5768:3333..35101683186855.2140782-CDS-P-wetherbeei_contig5768:3333..3510Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5768 3334..3510 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5768.3.1prot_P-wetherbeei_contig5768.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5768 3334..3510 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5768.3.1

>prot_P-wetherbeei_contig5768.3.1 ID=prot_P-wetherbeei_contig5768.3.1|Name=mRNA_P-wetherbeei_contig5768.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=59bp
MRLRIFCGTWNVAGRILETHEQLEEWLGIEASEEEGRAPDVFAIGLQEVV
ELSAQNVVL
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mRNA from alignment at P-wetherbeei_contig5768:3331..3510+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5768.3.1 ID=mRNA_P-wetherbeei_contig5768.3.1|Name=mRNA_P-wetherbeei_contig5768.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=180bp|location=Sequence derived from alignment at P-wetherbeei_contig5768:3331..3510+ (Phaeothamnion wetherbeei SAG_119_79)
ACGATGCGGCTTCGCATCTTCTGCGGCACGTGGAATGTCGCGGGGCGCAT TCTCGAGACGCATGAGCAGTTGGAGGAGTGGCTGGGGATCGAAGCGAGCG AGGAGGAGGGCCGGGCACCCGACGTTTTTGCTATAGGGCTGCAGGAGGTG GTGGAGCTCAGCGCGCAGAACGTCGTTTTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5768:3331..3510+

>mRNA_P-wetherbeei_contig5768.3.1 ID=mRNA_P-wetherbeei_contig5768.3.1|Name=mRNA_P-wetherbeei_contig5768.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=177bp|location=Sequence derived from alignment at P-wetherbeei_contig5768:3331..3510+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGCTTCGCATCTTCTGCGGCACGTGGAATGTCGCGGGGCGCATTCT
CGAGACGCATGAGCAGTTGGAGGAGTGGCTGGGGATCGAAGCGAGCGAGG
AGGAGGGCCGGGCACCCGACGTTTTTGCTATAGGGCTGCAGGAGGTGGTG
GAGCTCAGCGCGCAGAACGTCGTTTTG
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