mRNA_P-wetherbeei_contig5764.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: A0A835YLY7_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY7_9STRA) HSP 1 Score: 363 bits (931), Expect = 1.540e-121 Identity = 186/324 (57.41%), Postives = 226/324 (69.75%), Query Frame = 1
Query: 40 LAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAPPSAVQGEYRRADMLTFLEQLVRQVHAGARGGG-APINPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSGKIGRAVQFPEEFLLDVSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTR 1008
L W + GPG NLGNTCFLNATLQC+ Y PPL Q L+ +G AP +A Q + RA + LV A AR + I+PK +V NI +GKQFR GRQEDAHEFLR LVD MAE+ LRR GVK APHRL ETTAI+RVFGGYLR+QV+C +C +CS+TY+L MDLSL++ G I SL+ AL RF A ETLD++NRWRCGGC++ V A KQLT+ APN LV+H KRFA+GR S KI R V +PE L VSGPE+RV Y L GVVVH GG+M FGHY+ ++RA W+ MDD+ + L+Q AY+LFYTR
Sbjct: 1 LEWRELSKVGPGLQNLGNTCFLNATLQCLLYCPPLVQHLLNHKYG-APAAAQQAHHGRAQL-----NLVSNTAAVARSSAYSAISPKTIVANIRTIGKQFRP-GRQEDAHEFLRKLVDSMAEAILRRHGVKANAPHRLDETTAINRVFGGYLRNQVQCTKCRYCSNTYELYMDLSLDMVGNISSLEDALKRFQAVETLDSSNRWRCGGCKQKVCARKQLTIHTAPNALVLHLKRFAYGRQSTKIRRHVAYPEHLDLKVSGPEKRVGYDLCGVVVHEGGTMQFGHYFAYIRASNKLWYRMDDAHVKSTRKSRALEQQAYMLFYTR 317
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: K8ZBR0_NANGC (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8ZBR0_NANGC) HSP 1 Score: 362 bits (928), Expect = 2.610e-118 Identity = 181/364 (49.73%), Postives = 226/364 (62.09%), Query Frame = 1
Query: 4 KELFPSHMIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAPPSAVQ---------GEYRRADMLTFLEQLVRQVHAGARGGG--------------APINPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSGKIGRAVQFPEEFLLDVSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTRLLPAAP 1026
K +FP I ++ W V GPG NLGNTCFLNATLQC+ Y+PPLAQ + + PS + G R L + L+ +H G+ GG +PI+PK +V N+ L + FR +GRQEDAHEFLRHL+D + CL+ A VK AP RL ETT +HR+FGGYLRSQVRC QCG CS+TYD +DLSLEI G +G L+ AL+RFTA ETLD ANRWRC C ++V A K+L+ APNV + KRF FG S K+ + V +PE L +SGPE YRL GV+VH G S+ GHYY V+A G W+ MDD+ RQVGL TVL Q AYLLFY ++ P+ P
Sbjct: 114 KGIFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNATLQCLAYLPPLAQYFLSKKEEERVPSVLSPGAGQGHRGGGQARGGWLGLVRDLIANMHTGSGAGGGDRGDGLARREGGRSPISPKAIVGNLKALNRHFR-VGRQEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWRCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSRSSKLSKNVAYPESLRLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLHQHAYLLFYVKVGPSPP 476
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: A0A6H5JJN5_9PHAE (USP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJN5_9PHAE) HSP 1 Score: 372 bits (954), Expect = 4.860e-115 Identity = 184/345 (53.33%), Postives = 238/345 (68.99%), Query Frame = 1
Query: 1 GKELFPSHMIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAP-------PSAVQG--EYRRADMLTFLEQLVRQVHAGARGGGAPINPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSGKIGRAVQFPEEFLLDVSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTR 1008
GKEL+ I+A L W V GPG NLGNTCFLNATLQC+ Y+PPLAQ L+ G +G P P + G E+ + ++L +EQ +QVH G G I+PK +V+N+ ++G+QFR+ GRQEDAHEFLRHL+D M + L+R GVK AP RL ETT I+R+FGGYLRS+++C +CG CSDT+D MDLS++++ G+ S++ AL RF ATE L + N WRCGGC+K V+A K L+VF+ PN LV+ KRF F R + KI +QF + L VSGPER LY LTGVVVH GGSM+ GHYY +VR+ G W MDD S +V +TVL+ AY+LFYTR
Sbjct: 244 GKELYLDSKIKACLQWKQVHRMGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLNGFYGHGPQGIASRGPRPMGGFREFTKVEILAAMEQHTKQVHQGQFTGLGAISPKVLVQNLRMIGRQFRQ-GRQEDAHEFLRHLLDKMVDCYLKRKGVKSSAPSRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDLSRGVRSIEVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFTRKASKIKDHIQFADVLNLSVSGPERSALYDLTGVVVHAGGSMSSGHYYAYVRSCAGMWARMDDCSVSKVKRETVLRDQAYVLFYTR 587
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: W7TEV7_9STRA (Ubiquitin carboxyl-terminal hydrolase 36 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEV7_9STRA) HSP 1 Score: 362 bits (928), Expect = 5.250e-113 Identity = 181/364 (49.73%), Postives = 226/364 (62.09%), Query Frame = 1
Query: 4 KELFPSHMIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAPPSAVQ---------GEYRRADMLTFLEQLVRQVHAGARGGG--------------APINPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSGKIGRAVQFPEEFLLDVSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTRLLPAAP 1026
K +FP I ++ W V GPG NLGNTCFLNATLQC+ Y+PPLAQ + + PS + G R L + L+ +H G+ GG +PI+PK +V N+ L + FR +GRQEDAHEFLRHL+D + CL+ A VK AP RL ETT +HR+FGGYLRSQVRC QCG CS+TYD +DLSLEI G +G L+ AL+RFTA ETLD ANRWRC C ++V A K+L+ APNV + KRF FG S K+ + V +PE L +SGPE YRL GV+VH G S+ GHYY V+A G W+ MDD+ RQVGL TVL Q AYLLFY ++ P+ P
Sbjct: 114 KGIFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNATLQCLAYLPPLAQYFLSKKEEERVPSVLSPGAGQGHRGGGQARGGWLGLVRDLIANMHTGSGAGGGDRGDGLARREGGRSPISPKAIVGNLKALNRHFR-VGRQEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWRCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSRSSKLSKNVAYPESLRLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLHQHAYLLFYVKVGPSPP 476
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: A0A4D9CS17_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS17_9STRA) HSP 1 Score: 361 bits (926), Expect = 5.370e-113 Identity = 180/364 (49.45%), Postives = 227/364 (62.36%), Query Frame = 1
Query: 4 KELFPSHMIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAPPSAVQ---------GEYRRADMLTFLEQLVRQVHAGA--------------RGGGAPINPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSGKIGRAVQFPEEFLLDVSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTRLLPAAP 1026
K +FP I ++ W V GPG NLGNTCFLNATLQC+ Y+PPLAQ + ++ PS + G R L + L+ +H G GG +PI+PK +V N+ L + FR +GRQEDAHEFLRHL+D + CL+ A VK AP RL ETT +HR+FGGYLRSQVRC QCG CS+TYD +DLSLEI G +G L+ AL+RFTA ETLD ANRW+C C ++V A K+L+ APNV + KRF FG S K+ + V +PE L +SGPE YRL GV+VH G S+ GHYY V+A G W+ MDD+ RQVGL TVL+Q AYLLFY ++ P+ P
Sbjct: 114 KGIFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNATLQCLAYLPPLAQYFLSKKEEESVPSVLSPGAGQGHRGGGQARGGWLGLVRDLIANMHTGXXXXXXXXXXXLARREGGRSPISPKAIVGNLKALNRHFR-VGRQEDAHEFLRHLLDALQNGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWKCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSRSSKLSKNVAYPESLRLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLRQHAYLLFYVKVGPSPP 476
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: D8LD98_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD98_ECTSI) HSP 1 Score: 337 bits (865), Expect = 6.520e-106 Identity = 178/360 (49.44%), Postives = 229/360 (63.61%), Query Frame = 1
Query: 4 KELFPSHMIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAP-------PSAVQG--EYRRADMLTFLEQLVRQVHAGARGGGAP--INPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEI----AGGIG----SLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSGKIGRAVQFPEEFLLDVSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTRLLPAAP 1026
+EL+P +R L W G G N+GNTC+LN+ LQC+ YVPPLAQ L+ G + Q P + G ++ D+L +++LV Q+H G I P+ N+ +G++FR+ GRQEDAHEFLRHLVD MA S L R GV AP+RL ETT IHRVFGGYLRSQ++C +CGFCSDT+D MDL++ + + G+ SLQAAL RFTA ETL A N W+CGGC K+V A K L+VF+ PN LV KRF F G K+ + F ++ L+VSGPER Y LTGVVVH G +M+ GHYY +VR+ G+W M+DS +V L TVL+ AY+LFYTR P AP
Sbjct: 112 QELYPESQVRPNLTWRWPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGSHATCSESPFSFNGSTDFCEDDILGAMQKLVGQIHQTKSGSAEQQAIRPRTFSDNLRKIGEKFRR-GRQEDAHEFLRHLVDKMAGSYLERRGVDPFAPNRLAETTPIHRVFGGYLRSQLKCSECGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVEAEKNLSVFKPPNALVFQLKRFGFTNGPRKVKDHISFGDKLNLEVSGPERWANYDLTGVVVHSGKTMSSGHYYAYVRSSAGSWARMNDSVVTKVTLDTVLRDKAYVLFYTRRPPPAP 470
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: A0A7S1U5Y3_9STRA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5Y3_9STRA) HSP 1 Score: 314 bits (804), Expect = 9.660e-101 Identity = 166/344 (48.26%), Postives = 217/344 (63.08%), Query Frame = 1
Query: 4 KELFPSHMIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAPPSAVQGEYRRADMLTFLEQLVRQVHAGARGGGAPINPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSG-----KIGRAVQFPEEFLLDVSGPERR---VLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTRL 1011
+ L P+ + L W VRG GPG NLGNTCFLN+T+QC+ +PPL Q L +V + R D+L + +R+ G R PK +V N+ + + F K+GRQEDAHE+LR L+D + +SCL R+G+K A R ET+A+HR+FGGYLRSQ++C C +CS+TYD +DLSLEI G + SL +AL F A E LD NRW+CGGC K+VRA KQ+TVFRAP VL I KRF+FG G G KI R + +PE +D++G R V YRL GVVVHVG S+ GHY+ +VR W+ DDSST+QV + L Q AY+LFY R+
Sbjct: 38 EHLAPASLAGRYLRWERVRGPGPGLSNLGNTCFLNSTMQCLAALPPLVQYL----------ESVGEDGGRNDLLGLIGGFMRKF-GGTRSNA--FAPKAIVGNLRRISRNF-KLGRQEDAHEYLRQLLDGLHKSCLMRSGLKPTACGRREETSAMHRLFGGYLRSQLKCNDCAYCSNTYDACLDLSLEIHGKVSSLPSALEAFQAAEILDKDNRWKCGGCNKLVRARKQITVFRAPAVLCIQLKRFSFGFGGGFFGGGKITRFIPYPEVLTVDITGGRARREAVRYRLQGVVVHVGQSVNVGHYFAYVRGANNLWYLKDDSSTQQVPRKEALSQKAYILFYVRI 367
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: A0A6H5JKG0_9PHAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG0_9PHAE) HSP 1 Score: 293 bits (749), Expect = 4.780e-88 Identity = 182/441 (41.27%), Postives = 231/441 (52.38%), Query Frame = 1
Query: 4 KELFPSHMIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAP-------PSAVQG--EYRRADMLTFLEQLVRQV----------------------------HAGARGGG--APINPKNVVKNIHVLGKQFRKIGRQ---------------------------------EDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEI----AGGIG----SLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSGKIGRAVQFPEEFLLDVSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDS------------STR-------QVGLQTVLQQPAYLLFYTRL-LPAAP 1026
+EL+P +R L W G G N+GNTC+LN+ LQC+ YVPPLAQ L+ GG+ Q P + G ++ D+L +++LV QV H G I P+ N+ +G++FR+ GRQ EDAHE LRHLVD MA S L R GV A +RLGETT IHRVFGGYLRSQ+ C +CGFCSDT+D MDL++ + + G+ SLQAAL RFTA ETL A N W+CGGC K+V A K L+VF+ PN LV KRF F G K+ + F ++ L+VSGPER Y LTGVV+H G +M+ GHYY +VR+ G W M+DS STR QV L TVL+ AY+LFYTR +PA P
Sbjct: 112 QELYPESQVRPNLTWRWPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGGYSQGSQATCSESPLPLNGSTDFGEDDILGAMQKLVGQVLLQHQMSARVLYLSALLGISRDLPLFQIHQTKSGSADQQAIRPRTFSDNLRKIGEKFRR-GRQVMNLASRTRPISLRCFSFLPDQRTSGDATPYGQEDAHELLRHLVDKMAGSYLERRGVDPFASNRLGETTPIHRVFGGYLRSQLECSKCGFCSDTFDPFMDLAMNVEKVDSRGVAMKERSLQAALRRFTAPETLGAGNEWKCGGCNKLVEAEKNLSVFKPPNALVFQLKRFGFTNGPRKVNDHISFGDKLNLEVSGPERWTNYDLTGVVIHSGKTMSSGHYYAYVRSSAGCWARMNDSVVTKDQGQLNPSSTRTRSLACIQVTLDTVLRDKAYVLFYTRCPVPAPP 551
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: A0A485KQZ8_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQZ8_9STRA) HSP 1 Score: 284 bits (726), Expect = 6.150e-87 Identity = 162/344 (47.09%), Postives = 210/344 (61.05%), Query Frame = 1
Query: 10 LFPSHMIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQ-LLMRGGFGQAPPSAVQGEYRRADMLTFLEQLVRQVHAGARGGGAP--INPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRF-AFGRGSGKIGRAVQFPEEFLLD----VSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTRLLP 1017
L S I A++AW R GPG +NLGNTC+LN+ LQC+ Y P AQ LL R ++ G + M +LV Q+HA AP P+ +V N+ L K FR IGRQED+HEF RHL+D M ++ L++AGVK + TT +H VFGG LRS V+C +C F S+ + +DLSLEI+ GI +++AAL+ FTA ETLDA N W+CGGC + RA K L + PN LV+H KRF AF GK+ + + F E L+ +S E Y LT V+VH G S GHYY FV++P GTWH M+D + R V +QTVLQQ AY+LFYTR LP
Sbjct: 59 LVASEDIHALVAWEKPRKIGPGLMNLGNTCYLNSVLQCLMYSPAFAQYLLPRAKAAESSTKQHNGFHAEKAMA----RLVAQMHAP----NAPRVTQPREIVVNLKQLAKFFR-IGRQEDSHEFFRHLMDGMHKASLKQAGVKDTSSEAT--TTLVHSVFGGTLRSHVQCAKCKFVSERLEPFLDLSLEISSGISTVKAALAHFTAVETLDAENAWKCGGCSQRSRASKGLNIHAVPNALVLHLKRFDAF---YGKLKKHIAFDEVLSLNQGKVLSQAEEHATYTLTAVLVHSGSSPDCGHYYAFVKSPAGTWHEMNDETVRVVNVQTVLQQRAYMLFYTRKLP 388
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: W4FU03_9STRA (Ubiquitin carboxyl-terminal hydrolase n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FU03_9STRA) HSP 1 Score: 274 bits (700), Expect = 4.690e-83 Identity = 147/343 (42.86%), Postives = 207/343 (60.35%), Query Frame = 1
Query: 28 IRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAPPSAVQGEYRR---ADMLTFLEQLVRQVHAGARGGGAP--INPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRF-AFGRGSGKIGRAVQFPEEFLLDV----SGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTRLLPAAP 1026
I A++ WA+ R GPG +NLGNTC+LN+ LQC+ Y P AQ L+R SA +++ E+ + + + AP + P+++V N+ + K FR IGRQED+HEF RHL+D + + L++AG+ +P + +T +H VFGG LRS V+C +C F S + +DLSLE++ GI S++AAL+ FTA ETLDAAN W+C GC + A K L + PN LV+H KRF AF GK+ + + F E L+ + P+ Y LT V+VH G S GHYY FV++P GTWH M+D + R V + TVLQQ AY+LFY+R +P P
Sbjct: 64 IHALVRWAHPRKIGPGLMNLGNTCYLNSVLQCLVYSPAFAQYLVRRAAVNQAASAPSSKHKMHGGGGSSFHAEKAMARFLSLMHAPNAPRVMQPRDIVVNLKQIAKGFR-IGRQEDSHEFFRHLMDSLHNASLKQAGLTDKSP--VANSTLVHSVFGGTLRSHVQCAKCKFVSAHVEPFLDLSLEVSSGISSIEAALAHFTAVETLDAANAWKCSGCSQRSHASKGLNIHDIPNALVLHLKRFDAF---HGKLKKHIAFAETLHLNPRVLSTPPQEHATYALTAVLVHAGASPDCGHYYAFVKSPAGTWHEMNDETVRVVNVHTVLQQRAYMLFYSRQVPVKP 400 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5764.1.1 >prot_P-wetherbeei_contig5764.1.1 ID=prot_P-wetherbeei_contig5764.1.1|Name=mRNA_P-wetherbeei_contig5764.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=362bp MIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGback to top mRNA from alignment at P-wetherbeei_contig5764:907..2016+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5764.1.1 ID=mRNA_P-wetherbeei_contig5764.1.1|Name=mRNA_P-wetherbeei_contig5764.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1110bp|location=Sequence derived from alignment at P-wetherbeei_contig5764:907..2016+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5764:907..2016+ >mRNA_P-wetherbeei_contig5764.1.1 ID=mRNA_P-wetherbeei_contig5764.1.1|Name=mRNA_P-wetherbeei_contig5764.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1086bp|location=Sequence derived from alignment at P-wetherbeei_contig5764:907..2016+ (Phaeothamnion wetherbeei SAG_119_79)back to top |