mRNA_P-wetherbeei_contig5764.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5764.1.1
Unique NamemRNA_P-wetherbeei_contig5764.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: A0A835YLY7_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY7_9STRA)

HSP 1 Score: 363 bits (931), Expect = 1.540e-121
Identity = 186/324 (57.41%), Postives = 226/324 (69.75%), Query Frame = 1
Query:   40 LAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAPPSAVQGEYRRADMLTFLEQLVRQVHAGARGGG-APINPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSGKIGRAVQFPEEFLLDVSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTR 1008
            L W  +   GPG  NLGNTCFLNATLQC+ Y PPL Q L+   +G AP +A Q  + RA +      LV    A AR    + I+PK +V NI  +GKQFR  GRQEDAHEFLR LVD MAE+ LRR GVK  APHRL ETTAI+RVFGGYLR+QV+C +C +CS+TY+L MDLSL++ G I SL+ AL RF A ETLD++NRWRCGGC++ V A KQLT+  APN LV+H KRFA+GR S KI R V +PE   L VSGPE+RV Y L GVVVH GG+M FGHY+ ++RA    W+ MDD+  +       L+Q AY+LFYTR
Sbjct:    1 LEWRELSKVGPGLQNLGNTCFLNATLQCLLYCPPLVQHLLNHKYG-APAAAQQAHHGRAQL-----NLVSNTAAVARSSAYSAISPKTIVANIRTIGKQFRP-GRQEDAHEFLRKLVDSMAEAILRRHGVKANAPHRLDETTAINRVFGGYLRNQVQCTKCRYCSNTYELYMDLSLDMVGNISSLEDALKRFQAVETLDSSNRWRCGGCKQKVCARKQLTIHTAPNALVLHLKRFAYGRQSTKIRRHVAYPEHLDLKVSGPEKRVGYDLCGVVVHEGGTMQFGHYFAYIRASNKLWYRMDDAHVKSTRKSRALEQQAYMLFYTR 317          
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: K8ZBR0_NANGC (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8ZBR0_NANGC)

HSP 1 Score: 362 bits (928), Expect = 2.610e-118
Identity = 181/364 (49.73%), Postives = 226/364 (62.09%), Query Frame = 1
Query:    4 KELFPSHMIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAPPSAVQ---------GEYRRADMLTFLEQLVRQVHAGARGGG--------------APINPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSGKIGRAVQFPEEFLLDVSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTRLLPAAP 1026
            K +FP   I  ++ W  V   GPG  NLGNTCFLNATLQC+ Y+PPLAQ  +     +  PS +          G   R   L  +  L+  +H G+  GG              +PI+PK +V N+  L + FR +GRQEDAHEFLRHL+D +   CL+ A VK  AP RL ETT +HR+FGGYLRSQVRC QCG CS+TYD  +DLSLEI G +G L+ AL+RFTA ETLD ANRWRC  C ++V A K+L+   APNV  +  KRF FG  S K+ + V +PE   L +SGPE    YRL GV+VH G S+  GHYY  V+A  G W+ MDD+  RQVGL TVL Q AYLLFY ++ P+ P
Sbjct:  114 KGIFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNATLQCLAYLPPLAQYFLSKKEEERVPSVLSPGAGQGHRGGGQARGGWLGLVRDLIANMHTGSGAGGGDRGDGLARREGGRSPISPKAIVGNLKALNRHFR-VGRQEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWRCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSRSSKLSKNVAYPESLRLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLHQHAYLLFYVKVGPSPP 476          
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: A0A6H5JJN5_9PHAE (USP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJN5_9PHAE)

HSP 1 Score: 372 bits (954), Expect = 4.860e-115
Identity = 184/345 (53.33%), Postives = 238/345 (68.99%), Query Frame = 1
Query:    1 GKELFPSHMIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAP-------PSAVQG--EYRRADMLTFLEQLVRQVHAGARGGGAPINPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSGKIGRAVQFPEEFLLDVSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTR 1008
            GKEL+    I+A L W  V   GPG  NLGNTCFLNATLQC+ Y+PPLAQ L+ G +G  P       P  + G  E+ + ++L  +EQ  +QVH G   G   I+PK +V+N+ ++G+QFR+ GRQEDAHEFLRHL+D M +  L+R GVK  AP RL ETT I+R+FGGYLRS+++C +CG CSDT+D  MDLS++++ G+ S++ AL RF ATE L + N WRCGGC+K V+A K L+VF+ PN LV+  KRF F R + KI   +QF +   L VSGPER  LY LTGVVVH GGSM+ GHYY +VR+  G W  MDD S  +V  +TVL+  AY+LFYTR
Sbjct:  244 GKELYLDSKIKACLQWKQVHRMGPGLRNLGNTCFLNATLQCLSYLPPLAQHLLNGFYGHGPQGIASRGPRPMGGFREFTKVEILAAMEQHTKQVHQGQFTGLGAISPKVLVQNLRMIGRQFRQ-GRQEDAHEFLRHLLDKMVDCYLKRKGVKSSAPSRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDLSRGVRSIEVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFTRKASKIKDHIQFADVLNLSVSGPERSALYDLTGVVVHAGGSMSSGHYYAYVRSCAGMWARMDDCSVSKVKRETVLRDQAYVLFYTR 587          
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: W7TEV7_9STRA (Ubiquitin carboxyl-terminal hydrolase 36 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEV7_9STRA)

HSP 1 Score: 362 bits (928), Expect = 5.250e-113
Identity = 181/364 (49.73%), Postives = 226/364 (62.09%), Query Frame = 1
Query:    4 KELFPSHMIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAPPSAVQ---------GEYRRADMLTFLEQLVRQVHAGARGGG--------------APINPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSGKIGRAVQFPEEFLLDVSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTRLLPAAP 1026
            K +FP   I  ++ W  V   GPG  NLGNTCFLNATLQC+ Y+PPLAQ  +     +  PS +          G   R   L  +  L+  +H G+  GG              +PI+PK +V N+  L + FR +GRQEDAHEFLRHL+D +   CL+ A VK  AP RL ETT +HR+FGGYLRSQVRC QCG CS+TYD  +DLSLEI G +G L+ AL+RFTA ETLD ANRWRC  C ++V A K+L+   APNV  +  KRF FG  S K+ + V +PE   L +SGPE    YRL GV+VH G S+  GHYY  V+A  G W+ MDD+  RQVGL TVL Q AYLLFY ++ P+ P
Sbjct:  114 KGIFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNATLQCLAYLPPLAQYFLSKKEEERVPSVLSPGAGQGHRGGGQARGGWLGLVRDLIANMHTGSGAGGGDRGDGLARREGGRSPISPKAIVGNLKALNRHFR-VGRQEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWRCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSRSSKLSKNVAYPESLRLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLHQHAYLLFYVKVGPSPP 476          
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: A0A4D9CS17_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS17_9STRA)

HSP 1 Score: 361 bits (926), Expect = 5.370e-113
Identity = 180/364 (49.45%), Postives = 227/364 (62.36%), Query Frame = 1
Query:    4 KELFPSHMIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAPPSAVQ---------GEYRRADMLTFLEQLVRQVHAGA--------------RGGGAPINPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSGKIGRAVQFPEEFLLDVSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTRLLPAAP 1026
            K +FP   I  ++ W  V   GPG  NLGNTCFLNATLQC+ Y+PPLAQ  +     ++ PS +          G   R   L  +  L+  +H G                GG +PI+PK +V N+  L + FR +GRQEDAHEFLRHL+D +   CL+ A VK  AP RL ETT +HR+FGGYLRSQVRC QCG CS+TYD  +DLSLEI G +G L+ AL+RFTA ETLD ANRW+C  C ++V A K+L+   APNV  +  KRF FG  S K+ + V +PE   L +SGPE    YRL GV+VH G S+  GHYY  V+A  G W+ MDD+  RQVGL TVL+Q AYLLFY ++ P+ P
Sbjct:  114 KGIFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNATLQCLAYLPPLAQYFLSKKEEESVPSVLSPGAGQGHRGGGQARGGWLGLVRDLIANMHTGXXXXXXXXXXXLARREGGRSPISPKAIVGNLKALNRHFR-VGRQEDAHEFLRHLLDALQNGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWKCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSRSSKLSKNVAYPESLRLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLRQHAYLLFYVKVGPSPP 476          
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: D8LD98_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD98_ECTSI)

HSP 1 Score: 337 bits (865), Expect = 6.520e-106
Identity = 178/360 (49.44%), Postives = 229/360 (63.61%), Query Frame = 1
Query:    4 KELFPSHMIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAP-------PSAVQG--EYRRADMLTFLEQLVRQVHAGARGGGAP--INPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEI----AGGIG----SLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSGKIGRAVQFPEEFLLDVSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTRLLPAAP 1026
            +EL+P   +R  L W      G G  N+GNTC+LN+ LQC+ YVPPLAQ L+ G + Q         P +  G  ++   D+L  +++LV Q+H    G      I P+    N+  +G++FR+ GRQEDAHEFLRHLVD MA S L R GV   AP+RL ETT IHRVFGGYLRSQ++C +CGFCSDT+D  MDL++ +    + G+     SLQAAL RFTA ETL A N W+CGGC K+V A K L+VF+ PN LV   KRF F  G  K+   + F ++  L+VSGPER   Y LTGVVVH G +M+ GHYY +VR+  G+W  M+DS   +V L TVL+  AY+LFYTR  P AP
Sbjct:  112 QELYPESQVRPNLTWRWPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGSHATCSESPFSFNGSTDFCEDDILGAMQKLVGQIHQTKSGSAEQQAIRPRTFSDNLRKIGEKFRR-GRQEDAHEFLRHLVDKMAGSYLERRGVDPFAPNRLAETTPIHRVFGGYLRSQLKCSECGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVEAEKNLSVFKPPNALVFQLKRFGFTNGPRKVKDHISFGDKLNLEVSGPERWANYDLTGVVVHSGKTMSSGHYYAYVRSSAGSWARMNDSVVTKVTLDTVLRDKAYVLFYTRRPPPAP 470          
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: A0A7S1U5Y3_9STRA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5Y3_9STRA)

HSP 1 Score: 314 bits (804), Expect = 9.660e-101
Identity = 166/344 (48.26%), Postives = 217/344 (63.08%), Query Frame = 1
Query:    4 KELFPSHMIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAPPSAVQGEYRRADMLTFLEQLVRQVHAGARGGGAPINPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSG-----KIGRAVQFPEEFLLDVSGPERR---VLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTRL 1011
            + L P+ +    L W  VRG GPG  NLGNTCFLN+T+QC+  +PPL Q L           +V  +  R D+L  +   +R+   G R       PK +V N+  + + F K+GRQEDAHE+LR L+D + +SCL R+G+K  A  R  ET+A+HR+FGGYLRSQ++C  C +CS+TYD  +DLSLEI G + SL +AL  F A E LD  NRW+CGGC K+VRA KQ+TVFRAP VL I  KRF+FG G G     KI R + +PE   +D++G   R   V YRL GVVVHVG S+  GHY+ +VR     W+  DDSST+QV  +  L Q AY+LFY R+
Sbjct:   38 EHLAPASLAGRYLRWERVRGPGPGLSNLGNTCFLNSTMQCLAALPPLVQYL----------ESVGEDGGRNDLLGLIGGFMRKF-GGTRSNA--FAPKAIVGNLRRISRNF-KLGRQEDAHEYLRQLLDGLHKSCLMRSGLKPTACGRREETSAMHRLFGGYLRSQLKCNDCAYCSNTYDACLDLSLEIHGKVSSLPSALEAFQAAEILDKDNRWKCGGCNKLVRARKQITVFRAPAVLCIQLKRFSFGFGGGFFGGGKITRFIPYPEVLTVDITGGRARREAVRYRLQGVVVHVGQSVNVGHYFAYVRGANNLWYLKDDSSTQQVPRKEALSQKAYILFYVRI 367          
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: A0A6H5JKG0_9PHAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG0_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 4.780e-88
Identity = 182/441 (41.27%), Postives = 231/441 (52.38%), Query Frame = 1
Query:    4 KELFPSHMIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAP-------PSAVQG--EYRRADMLTFLEQLVRQV----------------------------HAGARGGG--APINPKNVVKNIHVLGKQFRKIGRQ---------------------------------EDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEI----AGGIG----SLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSGKIGRAVQFPEEFLLDVSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDS------------STR-------QVGLQTVLQQPAYLLFYTRL-LPAAP 1026
            +EL+P   +R  L W      G G  N+GNTC+LN+ LQC+ YVPPLAQ L+ GG+ Q         P  + G  ++   D+L  +++LV QV                            H    G      I P+    N+  +G++FR+ GRQ                                 EDAHE LRHLVD MA S L R GV   A +RLGETT IHRVFGGYLRSQ+ C +CGFCSDT+D  MDL++ +    + G+     SLQAAL RFTA ETL A N W+CGGC K+V A K L+VF+ PN LV   KRF F  G  K+   + F ++  L+VSGPER   Y LTGVV+H G +M+ GHYY +VR+  G W  M+DS            STR       QV L TVL+  AY+LFYTR  +PA P
Sbjct:  112 QELYPESQVRPNLTWRWPCQIGVGLENMGNTCYLNSILQCLSYVPPLAQHLLNGGYSQGSQATCSESPLPLNGSTDFGEDDILGAMQKLVGQVLLQHQMSARVLYLSALLGISRDLPLFQIHQTKSGSADQQAIRPRTFSDNLRKIGEKFRR-GRQVMNLASRTRPISLRCFSFLPDQRTSGDATPYGQEDAHELLRHLVDKMAGSYLERRGVDPFASNRLGETTPIHRVFGGYLRSQLECSKCGFCSDTFDPFMDLAMNVEKVDSRGVAMKERSLQAALRRFTAPETLGAGNEWKCGGCNKLVEAEKNLSVFKPPNALVFQLKRFGFTNGPRKVNDHISFGDKLNLEVSGPERWTNYDLTGVVIHSGKTMSSGHYYAYVRSSAGCWARMNDSVVTKDQGQLNPSSTRTRSLACIQVTLDTVLRDKAYVLFYTRCPVPAPP 551          
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: A0A485KQZ8_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQZ8_9STRA)

HSP 1 Score: 284 bits (726), Expect = 6.150e-87
Identity = 162/344 (47.09%), Postives = 210/344 (61.05%), Query Frame = 1
Query:   10 LFPSHMIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQ-LLMRGGFGQAPPSAVQGEYRRADMLTFLEQLVRQVHAGARGGGAP--INPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRF-AFGRGSGKIGRAVQFPEEFLLD----VSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTRLLP 1017
            L  S  I A++AW   R  GPG +NLGNTC+LN+ LQC+ Y P  AQ LL R    ++      G +    M     +LV Q+HA      AP    P+ +V N+  L K FR IGRQED+HEF RHL+D M ++ L++AGVK  +      TT +H VFGG LRS V+C +C F S+  +  +DLSLEI+ GI +++AAL+ FTA ETLDA N W+CGGC +  RA K L +   PN LV+H KRF AF    GK+ + + F E   L+    +S  E    Y LT V+VH G S   GHYY FV++P GTWH M+D + R V +QTVLQQ AY+LFYTR LP
Sbjct:   59 LVASEDIHALVAWEKPRKIGPGLMNLGNTCYLNSVLQCLMYSPAFAQYLLPRAKAAESSTKQHNGFHAEKAMA----RLVAQMHAP----NAPRVTQPREIVVNLKQLAKFFR-IGRQEDSHEFFRHLMDGMHKASLKQAGVKDTSSEAT--TTLVHSVFGGTLRSHVQCAKCKFVSERLEPFLDLSLEISSGISTVKAALAHFTAVETLDAENAWKCGGCSQRSRASKGLNIHAVPNALVLHLKRFDAF---YGKLKKHIAFDEVLSLNQGKVLSQAEEHATYTLTAVLVHSGSSPDCGHYYAFVKSPAGTWHEMNDETVRVVNVQTVLQQRAYMLFYTRKLP 388          
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Match: W4FU03_9STRA (Ubiquitin carboxyl-terminal hydrolase n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FU03_9STRA)

HSP 1 Score: 274 bits (700), Expect = 4.690e-83
Identity = 147/343 (42.86%), Postives = 207/343 (60.35%), Query Frame = 1
Query:   28 IRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFGQAPPSAVQGEYRR---ADMLTFLEQLVRQVHAGARGGGAP--INPKNVVKNIHVLGKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHRVFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATETLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRF-AFGRGSGKIGRAVQFPEEFLLDV----SGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTWHHMDDSSTRQVGLQTVLQQPAYLLFYTRLLPAAP 1026
            I A++ WA+ R  GPG +NLGNTC+LN+ LQC+ Y P  AQ L+R        SA   +++           E+ + +  +      AP  + P+++V N+  + K FR IGRQED+HEF RHL+D +  + L++AG+   +P  +  +T +H VFGG LRS V+C +C F S   +  +DLSLE++ GI S++AAL+ FTA ETLDAAN W+C GC +   A K L +   PN LV+H KRF AF    GK+ + + F E   L+     + P+    Y LT V+VH G S   GHYY FV++P GTWH M+D + R V + TVLQQ AY+LFY+R +P  P
Sbjct:   64 IHALVRWAHPRKIGPGLMNLGNTCYLNSVLQCLVYSPAFAQYLVRRAAVNQAASAPSSKHKMHGGGGSSFHAEKAMARFLSLMHAPNAPRVMQPRDIVVNLKQIAKGFR-IGRQEDSHEFFRHLMDSLHNASLKQAGLTDKSP--VANSTLVHSVFGGTLRSHVQCAKCKFVSAHVEPFLDLSLEVSSGISSIEAALAHFTAVETLDAANAWKCSGCSQRSHASKGLNIHDIPNALVLHLKRFDAF---HGKLKKHIAFAETLHLNPRVLSTPPQEHATYALTAVLVHAGASPDCGHYYAFVKSPAGTWHEMNDETVRVVNVHTVLQQRAYMLFYSRQVPVKP 400          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5764.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YLY7_9STRA1.540e-12157.41USP domain-containing protein (Fragment) n=1 Tax=T... [more]
K8ZBR0_NANGC2.610e-11849.73Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nann... [more]
A0A6H5JJN5_9PHAE4.860e-11553.33USP domain-containing protein n=2 Tax=Ectocarpus T... [more]
W7TEV7_9STRA5.250e-11349.73Ubiquitin carboxyl-terminal hydrolase 36 n=1 Tax=N... [more]
A0A4D9CS17_9STRA5.370e-11349.45Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nann... [more]
D8LD98_ECTSI6.520e-10649.44Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
A0A7S1U5Y3_9STRA9.660e-10148.26Ubiquitin carboxyl-terminal hydrolase (Fragment) n... [more]
A0A6H5JKG0_9PHAE4.780e-8841.27Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
A0A485KQZ8_9STRA6.150e-8747.09Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Apha... [more]
W4FU03_9STRA4.690e-8342.86Ubiquitin carboxyl-terminal hydrolase n=8 Tax=Apha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5764contigP-wetherbeei_contig5764:907..2016 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LD97
PFAMsUCH
Model size1110
Max annot lvl2759|Eukaryota
KEGG koko:K11855
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0016787,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0070013,GO:0101005,GO:0140096
Exons1
Evalue7.45e-116
EggNOG OGsKOG1865@1|root,KOG1865@2759|Eukaryota
EC3.4.19.12
Descriptionubiquitinyl hydrolase activity
Cds size1086
COG categoryO
BRITEko00000,ko01000,ko01002,ko04121
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186854.7178106-UTR-P-wetherbeei_contig5764:906..9301683186854.7178106-UTR-P-wetherbeei_contig5764:906..930Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5764 907..930 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186854.7302933-CDS-P-wetherbeei_contig5764:930..20161683186854.7302933-CDS-P-wetherbeei_contig5764:930..2016Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5764 931..2016 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5764.1.1prot_P-wetherbeei_contig5764.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5764 931..2016 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5764.1.1

>prot_P-wetherbeei_contig5764.1.1 ID=prot_P-wetherbeei_contig5764.1.1|Name=mRNA_P-wetherbeei_contig5764.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=362bp
MIRAMLAWANVRGAGPGFINLGNTCFLNATLQCMCYVPPLAQLLMRGGFG
QAPPSAVQGEYRRADMLTFLEQLVRQVHAGARGGGAPINPKNVVKNIHVL
GKQFRKIGRQEDAHEFLRHLVDHMAESCLRRAGVKGGAPHRLGETTAIHR
VFGGYLRSQVRCGQCGFCSDTYDLSMDLSLEIAGGIGSLQAALSRFTATE
TLDAANRWRCGGCRKMVRAHKQLTVFRAPNVLVIHFKRFAFGRGSGKIGR
AVQFPEEFLLDVSGPERRVLYRLTGVVVHVGGSMTFGHYYGFVRAPTGTW
HHMDDSSTRQVGLQTVLQQPAYLLFYTRLLPAAPAAAAARREGAVAAAAV
ASGNAAPAVAAA
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mRNA from alignment at P-wetherbeei_contig5764:907..2016+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5764.1.1 ID=mRNA_P-wetherbeei_contig5764.1.1|Name=mRNA_P-wetherbeei_contig5764.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1110bp|location=Sequence derived from alignment at P-wetherbeei_contig5764:907..2016+ (Phaeothamnion wetherbeei SAG_119_79)
GGCAAGGAGCTTTTCCCGTCGCACATGATCCGCGCGATGCTGGCGTGGGC GAACGTCCGCGGCGCCGGCCCCGGCTTCATCAACCTCGGCAACACGTGCT TCCTGAACGCGACGCTGCAGTGCATGTGCTACGTGCCGCCGCTGGCGCAG CTGCTGATGCGCGGCGGCTTCGGCCAGGCGCCTCCCTCAGCAGTGCAGGG CGAATACCGCCGCGCCGACATGCTCACCTTCCTGGAGCAGCTGGTGCGGC AGGTCCACGCCGGCGCGCGTGGCGGCGGCGCGCCCATCAACCCGAAGAAT GTAGTCAAGAACATCCACGTCCTCGGAAAGCAGTTTCGGAAGATCGGTCG GCAGGAGGACGCCCACGAATTCCTGCGGCACCTCGTTGACCACATGGCCG AATCGTGCCTCCGCCGCGCCGGCGTGAAGGGTGGCGCGCCGCACCGTCTG GGCGAGACGACTGCGATTCACCGCGTCTTCGGCGGCTACCTCCGGAGCCA AGTCCGATGCGGGCAGTGCGGTTTCTGCTCGGACACGTACGACCTCAGCA TGGACCTCAGCCTGGAGATTGCCGGCGGCATCGGCTCGCTGCAGGCGGCC CTCTCCCGCTTCACCGCCACGGAGACGCTGGACGCCGCCAACCGCTGGCG CTGCGGCGGCTGCCGCAAGATGGTTCGTGCCCACAAGCAGCTGACCGTTT TCCGTGCCCCCAACGTCCTCGTCATCCACTTCAAGCGCTTCGCCTTCGGC CGCGGCTCGGGCAAGATCGGCCGCGCCGTCCAGTTCCCGGAGGAATTCTT GCTGGACGTCTCGGGGCCCGAGAGGCGCGTCCTGTACCGCCTGACGGGCG TCGTGGTGCATGTCGGCGGTTCCATGACGTTCGGCCACTACTACGGCTTC GTGCGGGCACCAACGGGGACATGGCACCACATGGACGACTCAAGCACGCG CCAGGTGGGCCTCCAGACGGTGCTGCAGCAGCCCGCCTACCTCCTCTTCT ACACGCGCTTGCTCCCGGCGGCGCCGGCGGCGGCCGCGGCGCGGCGGGAG GGTGCCGTGGCGGCGGCGGCAGTGGCGTCGGGGAACGCGGCGCCGGCGGT CGCAGCGGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5764:907..2016+

>mRNA_P-wetherbeei_contig5764.1.1 ID=mRNA_P-wetherbeei_contig5764.1.1|Name=mRNA_P-wetherbeei_contig5764.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1086bp|location=Sequence derived from alignment at P-wetherbeei_contig5764:907..2016+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATCCGCGCGATGCTGGCGTGGGCGAACGTCCGCGGCGCCGGCCCCGG
CTTCATCAACCTCGGCAACACGTGCTTCCTGAACGCGACGCTGCAGTGCA
TGTGCTACGTGCCGCCGCTGGCGCAGCTGCTGATGCGCGGCGGCTTCGGC
CAGGCGCCTCCCTCAGCAGTGCAGGGCGAATACCGCCGCGCCGACATGCT
CACCTTCCTGGAGCAGCTGGTGCGGCAGGTCCACGCCGGCGCGCGTGGCG
GCGGCGCGCCCATCAACCCGAAGAATGTAGTCAAGAACATCCACGTCCTC
GGAAAGCAGTTTCGGAAGATCGGTCGGCAGGAGGACGCCCACGAATTCCT
GCGGCACCTCGTTGACCACATGGCCGAATCGTGCCTCCGCCGCGCCGGCG
TGAAGGGTGGCGCGCCGCACCGTCTGGGCGAGACGACTGCGATTCACCGC
GTCTTCGGCGGCTACCTCCGGAGCCAAGTCCGATGCGGGCAGTGCGGTTT
CTGCTCGGACACGTACGACCTCAGCATGGACCTCAGCCTGGAGATTGCCG
GCGGCATCGGCTCGCTGCAGGCGGCCCTCTCCCGCTTCACCGCCACGGAG
ACGCTGGACGCCGCCAACCGCTGGCGCTGCGGCGGCTGCCGCAAGATGGT
TCGTGCCCACAAGCAGCTGACCGTTTTCCGTGCCCCCAACGTCCTCGTCA
TCCACTTCAAGCGCTTCGCCTTCGGCCGCGGCTCGGGCAAGATCGGCCGC
GCCGTCCAGTTCCCGGAGGAATTCTTGCTGGACGTCTCGGGGCCCGAGAG
GCGCGTCCTGTACCGCCTGACGGGCGTCGTGGTGCATGTCGGCGGTTCCA
TGACGTTCGGCCACTACTACGGCTTCGTGCGGGCACCAACGGGGACATGG
CACCACATGGACGACTCAAGCACGCGCCAGGTGGGCCTCCAGACGGTGCT
GCAGCAGCCCGCCTACCTCCTCTTCTACACGCGCTTGCTCCCGGCGGCGC
CGGCGGCGGCCGCGGCGCGGCGGGAGGGTGCCGTGGCGGCGGCGGCAGTG
GCGTCGGGGAACGCGGCGCCGGCGGTCGCAGCGGCG
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