mRNA_P-wetherbeei_contig5760.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5760.1.2
Unique NamemRNA_P-wetherbeei_contig5760.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5760.1.2 vs. uniprot
Match: A0A835YUM0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUM0_9STRA)

HSP 1 Score: 233 bits (595), Expect = 6.700e-64
Identity = 164/452 (36.28%), Postives = 225/452 (49.78%), Query Frame = 1
Query:    1 VPLLAGYWRVDLSVLTIQECLYEGACKGGTAFISPGEYCNDGYVGPYCAVCESNYAESFGYMCHDCDARLYKAG----TIAVAAAAAIVIIGAFAYTAVDLWTENVWSGAPFSDWTCGGRCGMRGPLVAAFWAIPFSKLRTVVVCCQIIVQNAAVTGTVYPPMLRNYLPFLGFFGLDLSWLLLPLRCLVPGLNFIDRLAVLTITPLFLCALLAASWALVRFREGRKPAQLIVVSLWQAEESPSFSRTGSPPPTPRQRQLPGDARRERIDRKHLTAFFALTFLVYSAVSTAVLQTFACDDLPEVGGRYLRADYSISCDGDAYRRARTFAIFMMLLYPLGIPACYACVLWRQRRLHAARKAAAAAKRVRSSRPKFRETSLGNRRALEATAFLWAPYREAMFGWELSECARRLLLTGLLIFVRPGMAAQRAVASILATLSLGAAAYFSPHADWVD 1344
            +PL  G WR +L+   +++C    AC GG+A  SP +YC +GY GPYCAVC +++  +FG  C  CD+    A      I + AAA  +   A     +D   E +       D     + G+   + AA   +  S LR  +V  Q++ Q A+VTG  +P + R +L +L  F LDLS L L   C V   +F DRL  +TI PL   A L A    V  R  R+   L                T S     + R      R + I  +H T   A TFL++S  ST V QTFACD L   G  YLRADY++SC    +R    +A FM+L+YP+GIPA YA +L R R+  A  +       V +S              L+ T FLW PY++ ++ WEL ECARRLLL+G L+F+ PG  AQ AVA  LA +++      +PH D  D
Sbjct:  765 LPLRPGLWRENLTQANVRQCWRAEACHGGSATDSPDDYCAEGYSGPYCAVCAADHTRTFGNKCVACDSGQAAAAISVFVILICAAAVGISYIAITSLRLDALIEVM-------DSATEDQTGLLASVAAAL-GLALSHLRIPIVVVQVLTQFASVTGAPFPQLYRGFLRWLNLFSLDLS-LFLSAGCYVRT-DFYDRLLFVTIAPLVCVAALGAFHLFVCRRHQRRTGGLDGXXXXXXXXXXXXXXTSSSRSLAQWRSARARERLDDIVSRHATLLLAFTFLIFSFASTTVFQTFACDCLDGTGECYLRADYALSCGTARHRAYVIYASFMVLVYPVGIPALYAYMLRRHRKGIARHEDGGV---VAAS--------------LKPTKFLWTPYKKTVYFWELIECARRLLLSGFLVFIFPGTPAQSAVACTLALITIVVYGELAPHKDSTD 1189          
BLAST of mRNA_P-wetherbeei_contig5760.1.2 vs. uniprot
Match: A0A835YIY5_9STRA (PARP catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIY5_9STRA)

HSP 1 Score: 216 bits (550), Expect = 6.950e-58
Identity = 150/437 (34.32%), Postives = 212/437 (48.51%), Query Frame = 1
Query:    1 VPLLA---GYWRVDLSVLTIQECLYEGACKGGTAFISPGEYCNDGYVGPYCAVCESNYAESFGYMCHDCDARLYKAGTIAVAAAAAIVIIGAFAYTAVDL-WT-ENVWSGAPFSDWTCGGRCG--MRGPLVAAFWAIPFSKLRTVVVCCQIIVQNAAVTGTVYPPMLRNYLPFLGFFGLDLSWLLLPLRCLVPGLNFIDRLAVLTITPLFLCALLAASWALVRFREGRKPAQLIVVSLWQAEESPSFSRTGSPPPTPRQRQLPGDARRERIDRKHLTAFFALTFLVYSAVSTAVLQTFACDDLPEVGGRYLRADYSISCDGDAYRRARTFAIFMMLLYPLGIPACYACVLWRQRRLHAARKAAAAAKRVRSSRPKFRETSLGNRRALEATAFLWAPYREAMFGWELSECARRLLLTGLLIFVRPGMAAQRAVASILA 1290
            +P+LA   GYWR  L+   I+ C    AC GG A  S  +YC  GY GPYCAVC  NYA   GY C +C            A A A V+I   A  AV L W   +   G   +    GG  G  +R  ++    ++   +LR  V+  Q++ Q  ++TG V PP    +L  +  F LDL WL  P  C +  +NF  RL + T+ PL + AL+                +L +++  ++E++   S                 A  + +  K L A    TFL++S VS  + QTFACDDL  +   YLRADYS+ C    +   R F+I M+++YP+GIPA Y   LWR    H          RVR       +TS    +  + ++FLW PY+   + WE+ EC RRL++TGLL+F+ PG   Q AVA + A
Sbjct: 1087 IPMLALDQGYWRETLTQEVIRMCWNSAACGGGAAAASVDDYCTAGYKGPYCAVCSDNYAALVGYRCVECTDT---------AVAVAFVVIALVAVVAVFLAWVLASAVGGTHTASEDSGGAKGTDIRSRVIRTV-SVLARRLRVPVIVFQVVTQYVSITGAVLPPAYTRFLHGMSIFLLDLRWLTSP-GCAM-SVNFYGRLLIATLAPLAVVALIFVP-------------RLCLIARSRSEQASRGSH----------------AMLQSLAEKDLNAVLGFTFLIFSGVSVTIFQTFACDDLQFIDKSYLRADYSVECYTAEHTAYRIFSIIMVVVYPIGIPALYMGTLWRCFGAH----------RVRE------QTSQLTSQLTKVSSFLWQPYQRGAYYWEVVECLRRLMVTGLLVFIMPGTPGQSAVACVFA 1466          
BLAST of mRNA_P-wetherbeei_contig5760.1.2 vs. uniprot
Match: A0A835YVC3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVC3_9STRA)

HSP 1 Score: 209 bits (531), Expect = 5.000e-56
Identity = 152/453 (33.55%), Postives = 209/453 (46.14%), Query Frame = 1
Query:    1 VPLLAGYWRVDLSVLTIQECLYEGACKGGTAFISPGEYCNDGYVGPYCAVCESNYAESFGYMCHDCDARLYKAGTIAVAAAAAIVIIGAFAYTAVDLWTENVWSGAPFSDWTCGGRCGMRGPLVAAFWAIPFSKLRTVVVCCQIIVQNAAVTGTVYPPMLRNYLPFLGFFGLDLSWLLLPLRCLVPGLNFIDRLAVLTITPLFLCALLAAS--WALVRFREGRKPAQLIVVSLWQAEESPSFSRTGSPPPTPRQRQLPGDARRERIDRKHLTAFFALTFLVYSAVSTAVLQTFACDDLPEVGGRYLRADYSISCDGDAYRRARTFAIFMMLLYPLGIPACYACVLWR---QRRLHAARKAAAAAKRVRSSRPKFRETSLGNRRALEATAFLWAPYREAMFGWELSECARRLLLTGLLIFVRPGMAAQRAVASILATLSLGAAAYFSPHADWVD 1344
            +PL +GYWR  L    I++C    AC GG A  S  +YC  GY GPYC VC ++YA   GY C +C         IA++A AAI I+  F    +        +    SD         R   VA    +   +LR  +V  Q++ Q  ++TG   P    ++L  +  F LDL WL  P  C +  +NF DRL + T++PL + AL+ A   + + R + GR P +                                 A  + +  + L A F  TFL+++ VS  V +TFACD+L  VG  YLR DYSI C    +   R FA  M+L YP+GIPA Y   LW     RR H                    +TS    +  +A+ FLW PY+  +F WE+ EC RRL+LTGLL+F+ PG   Q AVA + A  +        PH D  D
Sbjct:  211 LPLDSGYWRETLMQELIRKCWNSDACIGGAAAASVDDYCAAGYEGPYCTVCSADYAALVGYRCVECTTTSVA---IALSAIAAIAIVVMFLAWVLVRAVGEAHTATDGSDRVEATNTSSR---VARTLLVLMRRLRVPIVVLQVLTQYVSITGGDLPLSYTHFLNGVSIFSLDLRWLTSP-GCAM-NVNFYDRLLMATLSPLAIIALIFAGRLYLIARAQFGRTPHR-------------------------------SHATLQLLVSEDLNAAFGFTFLIFAGVSVTVFETFACDELQYVGSSYLRVDYSIECYTPEHTAYRIFAGVMLLFYPIGIPALYMGTLWLCFVARRDHG-------------------QTS----QLAKASLFLWEPYQANVFYWEVVECVRRLMLTGLLVFIMPGTPGQSAVACVFAVFTGIGYESMRPHRDSYD 601          
BLAST of mRNA_P-wetherbeei_contig5760.1.2 vs. uniprot
Match: A0A836CF41_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF41_9STRA)

HSP 1 Score: 209 bits (531), Expect = 2.070e-55
Identity = 152/453 (33.55%), Postives = 209/453 (46.14%), Query Frame = 1
Query:    1 VPLLAGYWRVDLSVLTIQECLYEGACKGGTAFISPGEYCNDGYVGPYCAVCESNYAESFGYMCHDCDARLYKAGTIAVAAAAAIVIIGAFAYTAVDLWTENVWSGAPFSDWTCGGRCGMRGPLVAAFWAIPFSKLRTVVVCCQIIVQNAAVTGTVYPPMLRNYLPFLGFFGLDLSWLLLPLRCLVPGLNFIDRLAVLTITPLFLCALLAAS--WALVRFREGRKPAQLIVVSLWQAEESPSFSRTGSPPPTPRQRQLPGDARRERIDRKHLTAFFALTFLVYSAVSTAVLQTFACDDLPEVGGRYLRADYSISCDGDAYRRARTFAIFMMLLYPLGIPACYACVLWR---QRRLHAARKAAAAAKRVRSSRPKFRETSLGNRRALEATAFLWAPYREAMFGWELSECARRLLLTGLLIFVRPGMAAQRAVASILATLSLGAAAYFSPHADWVD 1344
            +PL +GYWR  L    I++C    AC GG A  S  +YC  GY GPYC VC ++YA   GY C +C         IA++A AAI I+  F    +        +    SD         R   VA    +   +LR  +V  Q++ Q  ++TG   P    ++L  +  F LDL WL  P  C +  +NF DRL + T++PL + AL+ A   + + R + GR P +                                 A  + +  + L A F  TFL+++ VS  V +TFACD+L  VG  YLR DYSI C    +   R FA  M+L YP+GIPA Y   LW     RR H                    +TS    +  +A+ FLW PY+  +F WE+ EC RRL+LTGLL+F+ PG   Q AVA + A  +        PH D  D
Sbjct:  798 LPLDSGYWRETLMQELIRKCWNSDACIGGAAAASVDDYCAAGYEGPYCTVCSADYAALVGYRCVECTTTSVA---IALSAIAAIAIVVMFLAWVLVRAVGEAHTATDGSDRVEATNTSSR---VARTLLVLMRRLRVPIVVLQVLTQYVSITGGDLPLSYTHFLNGVSIFSLDLRWLTSP-GCAM-NVNFYDRLLMATLSPLAIIALIFAGRLYLIARAQFGRTPHR-------------------------------SHATLQLLVSEDLNAAFGFTFLIFAGVSVTVFETFACDELQYVGSSYLRVDYSIECYTPEHTAYRIFAGVMLLFYPIGIPALYMGTLWLCFVARRDHG-------------------QTS----QLAKASLFLWEPYQANVFYWEVVECVRRLMLTGLLVFIMPGTPGQSAVACVFAVFTGIGYESMRPHRDSYD 1188          
BLAST of mRNA_P-wetherbeei_contig5760.1.2 vs. uniprot
Match: A0A835Z719_9STRA (UCH domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z719_9STRA)

HSP 1 Score: 209 bits (531), Expect = 2.300e-55
Identity = 152/453 (33.55%), Postives = 209/453 (46.14%), Query Frame = 1
Query:    1 VPLLAGYWRVDLSVLTIQECLYEGACKGGTAFISPGEYCNDGYVGPYCAVCESNYAESFGYMCHDCDARLYKAGTIAVAAAAAIVIIGAFAYTAVDLWTENVWSGAPFSDWTCGGRCGMRGPLVAAFWAIPFSKLRTVVVCCQIIVQNAAVTGTVYPPMLRNYLPFLGFFGLDLSWLLLPLRCLVPGLNFIDRLAVLTITPLFLCALLAAS--WALVRFREGRKPAQLIVVSLWQAEESPSFSRTGSPPPTPRQRQLPGDARRERIDRKHLTAFFALTFLVYSAVSTAVLQTFACDDLPEVGGRYLRADYSISCDGDAYRRARTFAIFMMLLYPLGIPACYACVLWR---QRRLHAARKAAAAAKRVRSSRPKFRETSLGNRRALEATAFLWAPYREAMFGWELSECARRLLLTGLLIFVRPGMAAQRAVASILATLSLGAAAYFSPHADWVD 1344
            +PL +GYWR  L    I++C    AC GG A  S  +YC  GY GPYC VC ++YA   GY C +C         IA++A AAI I+  F    +        +    SD         R   VA    +   +LR  +V  Q++ Q  ++TG   P    ++L  +  F LDL WL  P  C +  +NF DRL + T++PL + AL+ A   + + R + GR P +                                 A  + +  + L A F  TFL+++ VS  V +TFACD+L  VG  YLR DYSI C    +   R FA  M+L YP+GIPA Y   LW     RR H                    +TS    +  +A+ FLW PY+  +F WE+ EC RRL+LTGLL+F+ PG   Q AVA + A  +        PH D  D
Sbjct:  798 LPLDSGYWRETLMQELIRKCWNSDACIGGAAAASVDDYCAAGYEGPYCTVCSADYAALVGYRCVECTTTSVA---IALSAIAAIAIVVMFLAWVLVRAVGEAHTATDGSDRVEATNTSSR---VARTLLVLMRRLRVPIVVLQVLTQYVSITGGDLPLSYTHFLNGVSIFSLDLRWLTSP-GCAM-NVNFYDRLLMATLSPLAIIALIFAGRLYLIARAQFGRTPHR-------------------------------SHATLQLLVSEDLNAAFGFTFLIFAGVSVTVFETFACDELQYVGSSYLRVDYSIECYTPEHTAYRIFAGVMLLFYPIGIPALYMGTLWLCFVARRDHG-------------------QTS----QLAKASLFLWEPYQANVFYWEVVECVRRLMLTGLLVFIMPGTPGQSAVACVFAVFTGIGYESMRPHRDSYD 1188          
BLAST of mRNA_P-wetherbeei_contig5760.1.2 vs. uniprot
Match: A0A835YZ05_9STRA (UCH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ05_9STRA)

HSP 1 Score: 206 bits (525), Expect = 1.320e-54
Identity = 151/453 (33.33%), Postives = 208/453 (45.92%), Query Frame = 1
Query:    1 VPLLAGYWRVDLSVLTIQECLYEGACKGGTAFISPGEYCNDGYVGPYCAVCESNYAESFGYMCHDCDARLYKAGTIAVAAAAAIVIIGAFAYTAVDLWTENVWSGAPFSDWTCGGRCGMRGPLVAAFWAIPFSKLRTVVVCCQIIVQNAAVTGTVYPPMLRNYLPFLGFFGLDLSWLLLPLRCLVPGLNFIDRLAVLTITPLFLCALLAAS--WALVRFREGRKPAQLIVVSLWQAEESPSFSRTGSPPPTPRQRQLPGDARRERIDRKHLTAFFALTFLVYSAVSTAVLQTFACDDLPEVGGRYLRADYSISCDGDAYRRARTFAIFMMLLYPLGIPACYACVLWR---QRRLHAARKAAAAAKRVRSSRPKFRETSLGNRRALEATAFLWAPYREAMFGWELSECARRLLLTGLLIFVRPGMAAQRAVASILATLSLGAAAYFSPHADWVD 1344
            +PL +GYWR  L    I++C    AC G  A  S  +YC  GY GPYC VC ++YA   GY C +C         IA++A AAI I+  F    +        +    SD         R   VA    +   +LR  +V  Q++ Q  ++TG   P    ++L  +  F LDL WL  P  C +  +NF DRL + T++PL + AL+ A   + + R + GR P +                                 A  + +  + L A F  TFL+++ VS  V +TFACD+L  VG  YLR DYSI C    +   R FA  M+L YP+GIPA Y   LW     RR H                    +TS    +  +A+ FLW PY+  +F WE+ EC RRL+LTGLL+F+ PG   Q AVA + A  +        PH D  D
Sbjct:  459 LPLDSGYWRETLMQELIRKCWNSDACIGSAAAASVDDYCAAGYEGPYCTVCSADYAALVGYRCVECTTTSVA---IALSAIAAIAIVVMFLAWVLVRAVGEAHTATDGSDRVEATNTSSR---VARTLLVLMRRLRVPIVVLQVLTQYVSITGGDLPLSYTHFLNGVSIFSLDLRWLTSP-GCAM-NVNFYDRLLMATLSPLAIIALIFAGRLYLIARAQFGRTPHR-------------------------------SHATLQLLVSEDLNAAFGFTFLIFAGVSVTVFETFACDELQYVGSSYLRVDYSIECYTPEHTAYRIFAGVMLLFYPIGIPALYMGTLWLCFVARRDHG-------------------QTS----QLAKASLFLWEPYQANVFYWEVVECVRRLMLTGLLVFIMPGTPGQSAVACVFAVFTGIGYESMRPHRDSYD 849          
BLAST of mRNA_P-wetherbeei_contig5760.1.2 vs. uniprot
Match: A0A835YLB8_9STRA (Pectin lyase fold/virulence factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLB8_9STRA)

HSP 1 Score: 205 bits (521), Expect = 2.320e-54
Identity = 149/455 (32.75%), Postives = 209/455 (45.93%), Query Frame = 1
Query:    1 VPLLAGYWRVDLSV--LTIQECLYEGACKGGTAFISPGEYCNDGYVGPYCAVCESNYAESFGYMCHDCDARLYKAGTI--AVAAAAAIVIIGAFAYTAV-------DLWTENVWSGAPFSDWTCGGRCGMRGPLVAAFWAIPFSKLRTVVVCCQIIVQNAAVTGTVYPPMLRNYLPFLGFFGLDLSWLLLPLRCLVPGLNFIDRLAVLTITPLFLCALLAASWALVRFREGRKPAQLIVVSLWQAEESPSFSRTGSPPPTPRQRQLPGDARRERIDRKHLTAFFALTFLVYSAVSTAVLQTFACDDLPEVGG-RYLRADYSISCDGDAYRRARTFAIFMMLLYPLGIPACYACVLWRQRRLHAARKAAAAAKRVRSSRPKFRETSLGNRRALEATAFLWAPYREAMFGWELSECARRLLLTGLLIFVRPGMAAQRAVASILATLSLGAAAYFSPH 1329
            +PLL GYWR  L V    I  C  E AC+GG A +S  +YC+DGY GPYCAVC + Y    G  C+ C +    +  +   +   A IV+ GA A           +++ E        +D T     G+    V          +R  +V  QI+ Q  ++TG   P + R ++ +L    LD+S +L P  C V  +NF  +L + TITPL + ALL  ++ +      R          W       F                       +D+  L    + TFL++SA ST + QTFACD +P   G R+LRADY+I CD   Y   R +A  M+L+YP+GIPA Y   LW QR         +A K V  +     +  + +   L +  FLW PYR   + WE+ EC RRLLL+G L+F+ PG   Q   A I A  S+       PH
Sbjct:  385 LPLLPGYWRASLEVGQADILRCWNEKACRGGAAKLSTDDYCDDGYEGPYCAVCRAGYTSFVGSTCYKCQSGAVVSFAVFSTLVVVAMIVVCGALAAMGAHRPGSVSEVYKEGS-RNTGVADATASVYLGLTSTNVKGAVMSVLRAMRIPIVVMQILTQYLSITGVPIPALYRTFISWLDLINLDMSVVLSP-GC-VFDVNFYQKLLLSTITPLCILALLGLAYVVASRHANRS-------GRWGQRIYHLF-----------------------VDKAGLLVL-SFTFLIFSATSTVIFQTFACDAIPGFNGKRFLRADYAIECDTATYDAYRIYAAIMVLVYPVGIPALYMAALWWQR---------SAIKEVPEAAD-GEDAEVADNVHLASLGFLWQPYRRQFWYWEVVECGRRLLLSGGLVFILPGSFGQSVYACIFAYFSILVYLRCGPH 795          
BLAST of mRNA_P-wetherbeei_contig5760.1.2 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 2.640e-54
Identity = 170/556 (30.58%), Postives = 242/556 (43.53%), Query Frame = 1
Query:    1 VPLLAGYWRVDLSVLTIQECLYEGACKGGTAFISPGEYCNDGYVGPYCAVCESNYAESFGYMCHDCDARL------------------------YKAG-------TIAVAAAAAIVI-----------IGAFAYTAVDLW--TE--NVWSGAPFSD-WTCGGRC--------GMRGP-----------------LVAAFWAIPFSKLRTVVVCCQIIVQNAAVTGTVYPPMLRNYLPFLGFFGLDLSWLLLPLRCLVPGLNFIDRLAVLTITPLFLCALLAASWALVRFREGRKPAQLIVVS----------------------LWQAEESPSFSRTGSPPPTPRQRQLPGDARRERIDRK-------------HLTAFFALTFLVYSAVSTAVLQTFACDDLPEVGGRYLRADYSISCDGDAYRRARTFAIFMMLLYPLGIPACYACVLWRQR-RLHAARKAAAAAKRVRSSRPKFRETSLGNRRALEATAFLWAPYREAMFGWELSECARRLLLTGLLIFVRPGMAAQRAVASILATLSLGAAAYFSPHADWVD 1344
            +P+ AGYWR  ++ LTI+ECL E ACKGGT      EYCN+GYVGP CAVC + + +   Y CH C A                          Y  G       T+     +A+ I           + +F     D    TE  +V S A  +  W   G+         G RG                  +     A+P SKL+ V+V  QI    A +T   +PP+   +L  +G F  DL W+L    CL  G++F D+L ++TI PL     L      + F  G +PA+   +S                      +  A    + S T +     R+  +    R +  DRK             H T    + +LVY+ +ST V QTFAC+ LPE+G RYLRAD+ I CD   +   + +A  MM +YPLGIPA +   L RQR R++     A   +R      + + T     +++  T+FLW  Y    + +E+ EC RRLLLTG+L+F+ P    Q A + I A LSL       PH + +D
Sbjct: 1058 LPIKAGYWRAKVTSLTIRECLNEEACKGGTTVAEVQEYCNEGYVGPQCAVCGTGFGKGVAYECHPCTAGFQGGMYFLLAXXXXXXXXXXXXXXXYLVGGKSAVSSTVVSTKESALRIQHRGSVLLTRKVSSFGRARSDFGDLTEGPSVESSAVSTKAWGTEGKAAPTDVSVGGSRGQGTGGTGNDRDDDAPPTRVANLLAALPLSKLKIVIVVWQITSAFADITKAPFPPIYEKFLSIIGIFSFDLGWIL-SAACLTTGIDFYDKLLIVTIGPLVPLCFLG-----ITFFVGSRPAKETNMSPNATTADGGASGSGGRELEEGRVQGACSGSTTSVTANSGAAAREPSVRSALRAKSGDRKNPEQERLWGLFARHTTMMLIVLYLVYTQISTVVFQTFACEHLPEIGKRYLRADFGIECDTQRHTLYKAYAGVMMCIYPLGIPAVFLYFLLRQRSRINPPTDEALKKRRGGRHVVERKMTVRDKDQSIAPTSFLWNAYFPKCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAILSLMVFELLRPHVNHID 1607          
BLAST of mRNA_P-wetherbeei_contig5760.1.2 vs. uniprot
Match: A0A835ZLE8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE8_9STRA)

HSP 1 Score: 204 bits (520), Expect = 4.300e-54
Identity = 150/443 (33.86%), Postives = 205/443 (46.28%), Query Frame = 1
Query:   16 GYWRVDLSVLTIQECLYEGACKGGTAFISPGEYCNDGYVGPYCAVCESNYAESFGYMCHDCDARLYKAGTIAVAAAAAIVIIGAFAYTAVDLWTENVWSGAPFSDWTCGGRCGMRGPLVAAFWAIPFSKLRTVVVCCQIIVQNAAVTGTVYPPMLRNYLPFLGFFGLDLSWLLLPLRCLVPGLNFIDRLAVLTITPLFLCALLAASWALVRFREGRKPAQLIVVSLWQAEESPSFSRTGSPPPTPRQRQLPGDARRERIDRKHLTAFFALTFLVYSAVSTAVLQTFACDDLPEVGGRYLRADYSISCDGDAYRRARTFAIFMMLLYPLGIPACYACVLWRQRRLHAARKAAAAAKRVRSSRPKFRETSLGNRRALEATAFLWAPYREAMFGWELSECARRLLLTGLLIFVRPGMAAQRAVASILATLSLGAAAYFSPHADWVD 1344
            G+WR  L+   +++C    AC GG A  S  EYC  GY GPYCAVC  NY    GY C +C            A A A V++   A TAV L    V +    S+   G +       VA        +LR  +V  Q++ Q  ++TG   P     +L  +    LDL W+  P  C +  ++F  RL + T+TPL + AL+                +L +++  ++E             TPRQ      A  +R+  K   A  A TFL+++ VS  V QTFACD+L  +   YLRADYSI C    +   R FA  M+L+YP+GIPA Y   LWR    H               R   R + L      +A++FLW PYR   F WE+ EC RRL+LTGLL+F+ PG   Q AVA + A  +        PH +  D
Sbjct:  566 GFWRETLTQEVVRQCWNSAACSGGAAAASVDEYCAAGYKGPYCAVCSDNYGALVGYRCVECTNT---------AVAIAFVVMAVVAVTAVFLLWVLVRAVGGASENAGGAKPTDIRSRVARIVLELMRRLRVPIVVLQVLTQYVSITGASLPLSYTEFLNSMSLVSLDLRWVTSP-GCAMK-VDFYGRLLMATLTPLAVIALIFVP-------------RLYLIARARSER------------TPRQPH----ALLQRLVEKDRNAALAFTFLIFAGVSVTVFQTFACDELMYISKSYLRADYSIECYTPEHTAYRIFAGVMVLIYPIGIPALYMSTLWRCFGAH---------------RDHGRTSELA-----KASSFLWEPYRAHAFHWEVVECLRRLMLTGLLVFIMPGTPGQSAVACVFAFFTGFVYESVRPHGERSD 948          
BLAST of mRNA_P-wetherbeei_contig5760.1.2 vs. uniprot
Match: A0A6H5JU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU65_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 1.280e-53
Identity = 151/480 (31.46%), Postives = 216/480 (45.00%), Query Frame = 1
Query:    1 VPLLAGYWRVDLSVLTIQECLYEGACKGGTAFISPGEYCNDGYVGPYCAVCESNYAESFGYMCHDCDARLYKAGTIAVAAAAAIVIIGAFAYTAVDLWTENVWSGAPFSDWTCGGRCGMRGPLVAAFWAIPFSKLRTVVVCCQIIVQNAAVTGTVYPPMLRNYLPFLGFFGLDLSWLLLPLRCLVPGLNFIDRLAVLTITPLFLCALLAASWALVRFREGRKPAQLIVVSLWQAEESPSF----------------------------SRTGSPPPTPRQRQLPGDARRERIDRKHLTAFFALTFLVYSAVSTAVLQTFACDDLPEVGGRYLRADYSISCDGDAYRRARTFAIFMMLLYPLGIPACYACVLWRQRRLHAARKAAAAAKRVRSSRPKFRETSLGNRRALEA----TAFLWAPYREAMFGWELSECARRLLLTGLLIFVRPGMAAQRAVASILATLSLGAAAYFSPHADWVD 1344
            +P+ +GYWR      TI++CLYE ACKGGT      +YC  GY GPYCAVC S YA      CH+C    ++AG   +A    ++ +         L  E V   +P    +CG        +V+    +P  KL+  +V  QI+ Q A +T   +PP     L F+    LD+ W+L       P  NF  RL + T+ P+     L  ++   + R  R       V L +A E  S                             +R G        RQ+        + R+H+      +FLVYS VST V Q FACD L E G  +LRADYS+ C    ++  R +A  M+L+YP+GIP  YA +L++ R     ++A              R+     RR ++     T  LW  YR + + +E+ ECARRLLLTG L+F+ P  A Q  VA +L+  ++       P AD  D
Sbjct: 1388 LPVASGYWRSSADTTTIRQCLYEEACKGGTVISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECT-EAFRAGMYLLAVLGGLLAMACAWLLLRYLIQEPV---SPGRFLSCGN-----SRMVSKVKELPVHKLKIPIVVFQILTQYADITTVDFPPAYTKLLGFMDVLNLDMGWVLSASCIFSP--NFYGRLVLTTLVPIVFGLALCCTFMYAKSRSVR-------VGLPKANEGSSIRSINTVVSXXXXXXXXXXXXAPATVFTGTRNGHGMIMSEARQM------SVVKRRHVGVLVTASFLVYSTVSTIVFQAFACDTLDEQGKTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFQHRHRIYPKQA-------------LRDGVSPERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSND 1830          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5760.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YUM0_9STRA6.700e-6436.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YIY5_9STRA6.950e-5834.32PARP catalytic domain-containing protein n=1 Tax=T... [more]
A0A835YVC3_9STRA5.000e-5633.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CF41_9STRA2.070e-5533.55Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835Z719_9STRA2.300e-5533.55UCH domain-containing protein n=2 Tax=Tribonema mi... [more]
A0A835YZ05_9STRA1.320e-5433.33UCH domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835YLB8_9STRA2.320e-5432.75Pectin lyase fold/virulence factor n=1 Tax=Tribone... [more]
A0A6H5K4A5_9PHAE2.640e-5430.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZLE8_9STRA4.300e-5433.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JU65_9PHAE1.280e-5331.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5760contigP-wetherbeei_contig5760:2..2082 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LRF9
PFAMsBeta_helix,Chlam_PMP
Model size1344
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.7e-53
EggNOG OGs2BFIX@1|root,2S176@2759|Eukaryota
Cds size1344
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186854.2362185-CDS-P-wetherbeei_contig5760:1..2171683186854.2362185-CDS-P-wetherbeei_contig5760:1..217Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5760 2..217 -
1683186854.2505705-CDS-P-wetherbeei_contig5760:640..16291683186854.2505705-CDS-P-wetherbeei_contig5760:640..1629Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5760 641..1629 -
1683186854.2665234-CDS-P-wetherbeei_contig5760:1943..20821683186854.2665234-CDS-P-wetherbeei_contig5760:1943..2082Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5760 1944..2082 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5760.1.2prot_P-wetherbeei_contig5760.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5760 2..2082 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5760.1.2

>prot_P-wetherbeei_contig5760.1.2 ID=prot_P-wetherbeei_contig5760.1.2|Name=mRNA_P-wetherbeei_contig5760.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=448bp
VPLLAGYWRVDLSVLTIQECLYEGACKGGTAFISPGEYCNDGYVGPYCAV
CESNYAESFGYMCHDCDARLYKAGTIAVAAAAAIVIIGAFAYTAVDLWTE
NVWSGAPFSDWTCGGRCGMRGPLVAAFWAIPFSKLRTVVVCCQIIVQNAA
VTGTVYPPMLRNYLPFLGFFGLDLSWLLLPLRCLVPGLNFIDRLAVLTIT
PLFLCALLAASWALVRFREGRKPAQLIVVSLWQAEESPSFSRTGSPPPTP
RQRQLPGDARRERIDRKHLTAFFALTFLVYSAVSTAVLQTFACDDLPEVG
GRYLRADYSISCDGDAYRRARTFAIFMMLLYPLGIPACYACVLWRQRRLH
AARKAAAAAKRVRSSRPKFRETSLGNRRALEATAFLWAPYREAMFGWELS
ECARRLLLTGLLIFVRPGMAAQRAVASILATLSLGAAAYFSPHADWVD
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mRNA from alignment at P-wetherbeei_contig5760:2..2082-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5760.1.2 ID=mRNA_P-wetherbeei_contig5760.1.2|Name=mRNA_P-wetherbeei_contig5760.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2081bp|location=Sequence derived from alignment at P-wetherbeei_contig5760:2..2082- (Phaeothamnion wetherbeei SAG_119_79)
GTGCCGCTGCTGGCCGGCTACTGGCGTGTAGACCTTTCCGTCCTAACGAT CCAGGAGTGCTTGTACGAAGGCGCATGCAAGGGCGGAACTGCGTTTATTT CTCCCGGCGAGTATTGCAACGACGGCTACGTAGGGCCGTGTGAGTGGTTA CTCGCTGCTTCCTTTGTTTTTTCCTCCAATTCGTTTCCTCAGTCCTTCCG TCAGTGGGCTTGGTCAGGTTGCATTCTTGAAAGTGAAGGAACTGAGTTTC TTGCAAAAGACCACGGCGCAGTTGCTACGCCATGACTACCAGTGAGAGGC CGTCCCCCTCTCCTTATACTAATGGCATGCATCGCCGCCACTGTTGCCGC CGCCGCCGCGCCGCTGCGCCACCGCGGCCACCATTGCCACCGCAACCGCT GCCGCCGCTGTCGCTGCCGCCGCCGCCGCGCATTCCGCCCTCTCCCGCCG CAGACTGTGCTGTCTGCGAGTCCAACTACGCCGAGTCGTTCGGTTACATG TGTCACGACTGCGACGCGCGGTTGTACAAAGCGGGCACCATCGCCGTCGC AGCCGCCGCCGCGATCGTCATCATCGGCGCGTTCGCCTACACTGCCGTGG ACCTGTGGACCGAGAACGTGTGGAGCGGCGCCCCGTTTTCCGACTGGACG TGCGGCGGCCGCTGTGGCATGCGTGGACCGCTAGTAGCAGCATTTTGGGC AATCCCGTTCTCAAAGCTGCGCACCGTCGTCGTTTGCTGCCAAATCATTG TGCAGAACGCGGCGGTCACGGGCACCGTCTACCCGCCGATGCTGCGGAAC TACCTCCCGTTCCTGGGATTTTTCGGCCTCGACCTATCCTGGCTCCTGTT GCCGCTGCGCTGCCTGGTACCCGGTCTCAATTTTATTGACCGCCTCGCCG TCCTCACAATAACGCCGCTTTTCCTCTGCGCGCTGCTGGCGGCCTCGTGG GCGCTGGTGCGCTTCAGAGAGGGGCGCAAGCCGGCGCAGCTGATAGTTGT CTCGCTCTGGCAGGCGGAGGAATCACCATCTTTCAGCCGCACCGGCAGCC CACCGCCGACGCCACGGCAGCGGCAGCTGCCGGGCGATGCGCGGCGGGAG CGGATCGACCGCAAGCACCTGACCGCCTTCTTCGCGCTGACTTTTCTGGT ATACTCGGCTGTGAGCACCGCGGTGCTTCAGACGTTTGCGTGCGACGACC TGCCGGAGGTCGGCGGTCGCTATCTGCGGGCGGATTACAGCATTTCGTGC GACGGCGACGCGTACCGGCGGGCCCGCACCTTTGCGATTTTCATGATGCT TCTATACCCGCTCGGCATCCCGGCCTGCTACGCGTGCGTCCTCTGGCGCC AGCGCCGTCTTCACGCGGCGCGCAAAGCAGCGGCGGCAGCAAAACGGGTA CGAAGCTCCCGGCCAAAATTTCGCGAAACCAGCCTCGGCAATGTGGCTGC CAATGCAAGCGCTGGAGGCAGGGGCTGCGACGGTGGGGGCAGTGGCGGTG GCGGCGGCCGTGGCCGCCGTGGCGGCGGCGGCGGCGGCAAACCTGGCGGT GGCTACTCCAGCGGCGGCGGCGGCGGCTGCGGCGGCTATTCCAGCGGTGG CGATGGCGGCGATGGCAGCTACACCAGCTGGGGCGGCGACGACGGCGGTG GCTACACCAGCGGCGACGGCGGCGGCTACTCTAGCTGCGGCGGTGGCGGC GGCGGTGGCTACACCAGCCGCGACCGTGGTGGCTATTCCAGCTGCGACGG CGACGGTGGCGGTAGCTACACCCGCGGTGACGGCGGTAGCGGCGGCGGCA GAGGCGGCGCTGGCGGCGGCGGCGTCAACGCCGCGGCGGTCTGCGCCGTC GCCCGTCGCCGCAAGAGACGGGCGCTCGAGGCCACGGCCTTTTTGTGGGC ACCGTACCGCGAGGCGATGTTCGGGTGGGAATTGTCGGAGTGCGCCCGAC GCCTGCTGCTGACGGGGTTGCTGATCTTTGTGCGGCCGGGGATGGCTGCG CAGCGCGCCGTCGCCAGCATTCTGGCGACGCTGAGCCTCGGGGCGGCGGC GTACTTCTCGCCGCACGCCGACTGGGTCGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5760:2..2082-

>mRNA_P-wetherbeei_contig5760.1.2 ID=mRNA_P-wetherbeei_contig5760.1.2|Name=mRNA_P-wetherbeei_contig5760.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1344bp|location=Sequence derived from alignment at P-wetherbeei_contig5760:2..2082- (Phaeothamnion wetherbeei SAG_119_79)
GTGCCGCTGCTGGCCGGCTACTGGCGTGTAGACCTTTCCGTCCTAACGAT
CCAGGAGTGCTTGTACGAAGGCGCATGCAAGGGCGGAACTGCGTTTATTT
CTCCCGGCGAGTATTGCAACGACGGCTACGTAGGGCCGTACTGTGCTGTC
TGCGAGTCCAACTACGCCGAGTCGTTCGGTTACATGTGTCACGACTGCGA
CGCGCGGTTGTACAAAGCGGGCACCATCGCCGTCGCAGCCGCCGCCGCGA
TCGTCATCATCGGCGCGTTCGCCTACACTGCCGTGGACCTGTGGACCGAG
AACGTGTGGAGCGGCGCCCCGTTTTCCGACTGGACGTGCGGCGGCCGCTG
TGGCATGCGTGGACCGCTAGTAGCAGCATTTTGGGCAATCCCGTTCTCAA
AGCTGCGCACCGTCGTCGTTTGCTGCCAAATCATTGTGCAGAACGCGGCG
GTCACGGGCACCGTCTACCCGCCGATGCTGCGGAACTACCTCCCGTTCCT
GGGATTTTTCGGCCTCGACCTATCCTGGCTCCTGTTGCCGCTGCGCTGCC
TGGTACCCGGTCTCAATTTTATTGACCGCCTCGCCGTCCTCACAATAACG
CCGCTTTTCCTCTGCGCGCTGCTGGCGGCCTCGTGGGCGCTGGTGCGCTT
CAGAGAGGGGCGCAAGCCGGCGCAGCTGATAGTTGTCTCGCTCTGGCAGG
CGGAGGAATCACCATCTTTCAGCCGCACCGGCAGCCCACCGCCGACGCCA
CGGCAGCGGCAGCTGCCGGGCGATGCGCGGCGGGAGCGGATCGACCGCAA
GCACCTGACCGCCTTCTTCGCGCTGACTTTTCTGGTATACTCGGCTGTGA
GCACCGCGGTGCTTCAGACGTTTGCGTGCGACGACCTGCCGGAGGTCGGC
GGTCGCTATCTGCGGGCGGATTACAGCATTTCGTGCGACGGCGACGCGTA
CCGGCGGGCCCGCACCTTTGCGATTTTCATGATGCTTCTATACCCGCTCG
GCATCCCGGCCTGCTACGCGTGCGTCCTCTGGCGCCAGCGCCGTCTTCAC
GCGGCGCGCAAAGCAGCGGCGGCAGCAAAACGGGTACGAAGCTCCCGGCC
AAAATTTCGCGAAACCAGCCTCGGCAATAGACGGGCGCTCGAGGCCACGG
CCTTTTTGTGGGCACCGTACCGCGAGGCGATGTTCGGGTGGGAATTGTCG
GAGTGCGCCCGACGCCTGCTGCTGACGGGGTTGCTGATCTTTGTGCGGCC
GGGGATGGCTGCGCAGCGCGCCGTCGCCAGCATTCTGGCGACGCTGAGCC
TCGGGGCGGCGGCGTACTTCTCGCCGCACGCCGACTGGGTCGAC
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