mRNA_P-wetherbeei_contig57579.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57579.1.1 vs. uniprot
Match: A0A1F8VKE2_9BURK (Integrase catalytic domain-containing protein n=1 Tax=Curvibacter sp. GWA2_64_110 TaxID=1797747 RepID=A0A1F8VKE2_9BURK) HSP 1 Score: 212 bits (540), Expect = 2.040e-62 Identity = 100/168 (59.52%), Postives = 129/168 (76.79%), Query Frame = 1
Query: 4 GLIRFVVDIYPFELNSRRLHTSFEIFKEGIGLLPPPAFPSSFQQLDMIAAMSKMITVAQGGVDMVGLTYSSNELLDVKKDVGAKFRTFVKWNPDDLSQVFMQHPLTKGWLTIPSIRVDYTGGLSWIQHRLIRQHARQQYIEGGTYERLLRARQELYEMWMNPIARRNR 507
GL++FV D+YPFELN R+L T FE F+E L PP F S QLD+IAAM K +TV GGV++ G++YSS+++L +KK+VG F+T VKWNPDDLS +++QHPL+K WL +PS R DYT GLSW QH LIR+HAR ++++GG +RLL ARQEL+E WMN IAR NR
Sbjct: 423 GLVKFVTDVYPFELNERKLCTPFEAFQESFNTLRPPTFQWSMDQLDLIAAMRKDLTVGAGGVELPGISYSSSDVLVLKKEVGHTFKTGVKWNPDDLSFIYLQHPLSKDWLPVPSTRPDYTDGLSWNQHLLIRKHARDKHVQGGGVDRLLLARQELHESWMNGIARSNR 590
BLAST of mRNA_P-wetherbeei_contig57579.1.1 vs. uniprot
Match: UPI0015D298EC (DDE-type integrase/transposase/recombinase n=1 Tax=Rhodoferax sp. BLA1 TaxID=2576062 RepID=UPI0015D298EC) HSP 1 Score: 210 bits (534), Expect = 8.750e-62 Identity = 98/169 (57.99%), Postives = 130/169 (76.92%), Query Frame = 1
Query: 1 KGLIRFVVDIYPFELNSRRLHTSFEIFKEGIGLLPPPAFPSSFQQLDMIAAMSKMITVAQGGVDMVGLTYSSNELLDVKKDVGAKFRTFVKWNPDDLSQVFMQHPLTKGWLTIPSIRVDYTGGLSWIQHRLIRQHARQQYIEGGTYERLLRARQELYEMWMNPIARRNR 507
+GLI+FVVD+YPFELN R+L T F F++ L PP F S QLD+IAAM K +TV GGV + G++YSS+ +L +KK+VG F+T VKWNPD+LS +++QHP+ K WL +PS+R DYT GLSW QHRLIR+HAR++++ GG ++LL ARQEL+E+WMN IAR NR
Sbjct: 389 RGLIKFVVDVYPFELNERKLVTPFAAFQDSFNSLRPPTFQWSMDQLDLIAAMRKDLTVGPGGVSLPGISYSSSAVLAMKKEVGHTFKTGVKWNPDNLSFIYLQHPVNKDWLPVPSLRPDYTNGLSWNQHRLIRKHAREKHVRGGGVDQLLLARQELHELWMNGIARSNR 557
BLAST of mRNA_P-wetherbeei_contig57579.1.1 vs. uniprot
Match: UPI0009FD43C4 (DDE-type integrase/transposase/recombinase n=1 Tax=Curvibacter lanceolatus TaxID=86182 RepID=UPI0009FD43C4) HSP 1 Score: 209 bits (533), Expect = 2.250e-61 Identity = 101/169 (59.76%), Postives = 132/169 (78.11%), Query Frame = 1
Query: 4 GLIRFVVDIYPFELNSRRLHTSFEIFKEGIGLLPPPAFPSSFQQLDMIAAMSKMITVAQGGVDMVGLTYSSNELLDVKKDVGAKFRTFVKWNPDDLSQVFMQHPLTKGWLTIPSIRVDYTGGLSWIQHRLIRQHARQQYIEGGTYERLLR-ARQELYEMWMNPIARRNR 507
GL+RFVVD+YPFE NSR L +F+ FK G+ LPPP FP+S QLD++ A SK +TV GGV+M+GL+YSS +L +KK VG+KFRT VKW+PDDL V++Q+P K WLT+PS+ +YT GLSWIQH +IR+HAR++ IEGG YE LR AR +++E+WMNP+AR NR
Sbjct: 427 GLVRFVVDVYPFEDNSRTLEMAFDRFKAGLDELPPPVFPTSLDQLDLVLAQSKELTVGPGGVEMLGLSYSSPDLALMKKVVGSKFRTLVKWDPDDLGNVYVQNPKDKSWLTVPSLMPEYTNGLSWIQHNIIRKHAREKRIEGG-YEVALRCARLDIHELWMNPLARINR 594
BLAST of mRNA_P-wetherbeei_contig57579.1.1 vs. uniprot
Match: A0A4R3VL13_PELSC (Mu transposase-like protein n=2 Tax=Pelomonas saccharophila TaxID=304 RepID=A0A4R3VL13_PELSC) HSP 1 Score: 154 bits (389), Expect = 3.120e-42 Identity = 70/165 (42.42%), Postives = 113/165 (68.48%), Query Frame = 1
Query: 1 KGLIRFVVDIYPFELNSRRLHTSFEIFKEGIGLLPPPAFPSSFQQLDMIAAMSKMITVAQGGVDMVGLTYSSNELLDVKKDVGAKFRTFVKWNPDDLSQVFMQHPLTKGWLTIPSIRVDYTGGLSWIQHRLIRQHARQQYIEGGTYERLLRARQELYEMWMNPIA 495
+GL++F VD++PF++N R+L +++F EG+ P FP +++ + +A+SK TV QGGV++ GL Y + ELL +++ G +F+T+VKW+PDD+S++++Q P+ K W++ P DY LSW QH LIR+ ARQ+ + G+YE L RAR L++ WM +A
Sbjct: 177 RGLVQFAVDVHPFKVNERKLAKPYDLFLEGLERTPAACFPHDMERIRLASALSKPKTVDQGGVELHGLPYGAGELLPMRERYGKRFKTWVKWDPDDMSRLWVQDPVDKHWVSSPCRWTDYAKDLSWNQHLLIRKFARQELKKNGSYEYLERARLRLHDHWMEAVA 341
BLAST of mRNA_P-wetherbeei_contig57579.1.1 vs. uniprot
Match: A0A5C7VEI6_9BURK (Transposase n=1 Tax=Pelomonas sp. TaxID=1909303 RepID=A0A5C7VEI6_9BURK) HSP 1 Score: 158 bits (399), Expect = 4.010e-42 Identity = 73/169 (43.20%), Postives = 112/169 (66.27%), Query Frame = 1
Query: 1 KGLIRFVVDIYPFELNSRRLHTSFEIFKEGIGLLPPPAFPSSFQQLDMIAAMSKMITVAQGGVDMVGLTYSSNELLDVKKDVGAKFRTFVKWNPDDLSQVFMQHPLTKGWLTIPSIRVDYTGGLSWIQHRLIRQHARQQYIEGGTYERLLRARQELYEMWMNPIARRNR 507
+GL+ +VVD +PF++N R+L F++ +EG+ +PP FP ++L M++A+SK +TV QGGVD+ GL + ELL ++ +G KF+ ++KW+PDD+SQV++Q P + W+ P DY GLSW QH IR+ ARQ++ G YE L RAR L+E W ++ + R
Sbjct: 428 RGLVMYVVDYHPFQINERKLARPFDLMQEGLVRVPPARFPHDMERLRMVSALSKQLTVHQGGVDLHGLPFGGAELLPMRGALGEKFKAWIKWDPDDMSQVWVQDPGNEQWVASPCRWGDYANGLSWNQHLQIRKFARQEFKNNGAYEYLERARLRLHEHWQESVSWKTR 596
BLAST of mRNA_P-wetherbeei_contig57579.1.1 vs. uniprot
Match: UPI001C0DB9CF (DDE-type integrase/transposase/recombinase n=1 Tax=Polynucleobacter sp. Fuers-14 TaxID=1758364 RepID=UPI001C0DB9CF) HSP 1 Score: 156 bits (395), Expect = 1.490e-41 Identity = 76/159 (47.80%), Postives = 106/159 (66.67%), Query Frame = 1
Query: 7 LIRFVVDIYPFELNSRRLHTSFEIFKEGIGLLPPPAFPSSFQQLDMIAAMSKMITVAQGGVDMVGLTYSSNELLDVKKDVGAKFRTFVKWNPDDLSQVFMQHPLTKG-WLTIPSIRVDYTGGLSWIQHRLIRQHARQQYIEGGTYERLLRARQELYEMW 480
++++ VDI+PF +N +L SF++F E + +PPP F S + LD IAAMSK++ V GG+++ GL+YS EL +KK+VG KF+T VKW+PDDL V +QHPL WL +PS YT LSW+QHR IR +AR+ E+L RAR EL ++W
Sbjct: 429 ILKWAVDIHPFHINKHKLSRSFDLFGESLDQIPPPKFLGSLETLDRIAAMSKVLMVNSGGIELAGLSYSCPELFRMKKEVGPKFKTLVKWDPDDLVMVHVQHPLDHSQWLAVPSRNPHYTNQLSWVQHRNIRAYAREHLKNIRGQEQLDRARSELEDLW 587
BLAST of mRNA_P-wetherbeei_contig57579.1.1 vs. uniprot
Match: UPI0014950749 (Mu transposase C-terminal domain-containing protein n=1 Tax=Paucibacter aquatile TaxID=2070761 RepID=UPI0014950749) HSP 1 Score: 156 bits (394), Expect = 2.030e-41 Identity = 71/169 (42.01%), Postives = 113/169 (66.86%), Query Frame = 1
Query: 1 KGLIRFVVDIYPFELNSRRLHTSFEIFKEGIGLLPPPAFPSSFQQLDMIAAMSKMITVAQGGVDMVGLTYSSNELLDVKKDVGAKFRTFVKWNPDDLSQVFMQHPLTKGWLTIPSIRVDYTGGLSWIQHRLIRQHARQQYIEGGTYERLLRARQELYEMWMNPIARRNR 507
+GL+ +VVD +PF++N R+L +++ +EG+ +PP FP ++L M++AMSK +TV QGGV++ GL Y ELL +++ +G +F+T+VKW+PDD+SQV++Q P ++ W+ +Y GLSW QH IR+ AR + G YE L RAR L+E W ++ ++R
Sbjct: 428 RGLVMYVVDYHPFQVNERKLARPYDLMQEGLTRVPPARFPHDLERLRMVSAMSKQLTVHQGGVELHGLPYGGPELLSMRRALGTRFKTWVKWDPDDMSQVWIQDPKSQSWVASSCRWAEYANGLSWNQHLQIRKFARLELKSSGAYEYLERARLRLHEHWQESVSWKSR 596
BLAST of mRNA_P-wetherbeei_contig57579.1.1 vs. uniprot
Match: UPI00082C4262 (DDE-type integrase/transposase/recombinase n=2 Tax=Polynucleobacter TaxID=44013 RepID=UPI00082C4262) HSP 1 Score: 151 bits (381), Expect = 1.380e-39 Identity = 72/168 (42.86%), Postives = 112/168 (66.67%), Query Frame = 1
Query: 7 LIRFVVDIYPFELNSRRLHTSFEIFKEGIGLLPPPAFPSSFQQLDMIAAMSKMITVAQGGVDMVGLTYSSNELLDVKKDVGAKFRTFVKWNPDDLSQVFMQHPLTKG-WLTIPSIRVDYTGGLSWIQHRLIRQHARQQYIEGGTYERLLRARQELYEMWMNPIARRNR 507
++++ VDI+PF +N +L SF++F E + +PPP F S + L+ IAAMS+ +TV GG++++GL+YS EL +KK+VG KF+T VKW+PDDL +++QHPL W+ +PS Y LS++QHR IR AR+ + E E+L AR E+ EMW + + + ++
Sbjct: 429 ILKWAVDIHPFHINKHKLSRSFDLFGESLEQIPPPRFLGSLEALNRIAAMSRHLTVNSGGIELMGLSYSCPELFQMKKEVGPKFKTLVKWDPDDLHMLYVQHPLDHANWVPVPSRTPHYANQLSYVQHRNIRAFAREHFKEIRGQEQLDMARAEMQEMWQSRMIKEHK 596
BLAST of mRNA_P-wetherbeei_contig57579.1.1 vs. uniprot
Match: UPI000A027380 (Mu transposase C-terminal domain-containing protein n=1 Tax=Thauera butanivorans TaxID=86174 RepID=UPI000A027380) HSP 1 Score: 147 bits (371), Expect = 3.420e-38 Identity = 66/162 (40.74%), Postives = 105/162 (64.81%), Query Frame = 1
Query: 1 KGLIRFVVDIYPFELNSRRLHTSFEIFKEGIGLLPPPAFPSSFQQLDMIAAMSKMITVAQGGVDMVGLTYSSNELLDVKKDVGAKFRTFVKWNPDDLSQVFMQHPLTKGWLTIPSIRVDYTGGLSWIQHRLIRQHARQQYIEGGTYERLLRARQELYEMWMN 486
KGL+++ VD++PF ++ R+L F++ +GI PP ++ +F + M A+SK +TV+QGGV++ G+ + S EL +++ VG FRT VKW+PDD+ Q+++QHP+TK W+ PS YT GLSW QH LIR+ R+Q E + + ++E WM+
Sbjct: 427 KGLVQYFVDVHPFRIHERKLARPFDLMSDGIEKCPPASYLPNFDAVRMATAISKTLTVSQGGVEIRGIPFGSAELSPMRRAVGENFRTLVKWDPDDIDQIYVQHPITKEWICSPSRWPQYTQGLSWNQHLLIRKFLRKQLKAKNAEENYITSAMRMHEFWMD 588
BLAST of mRNA_P-wetherbeei_contig57579.1.1 vs. uniprot
Match: A0A0Q6WLZ9_9BURK (Integrase catalytic domain-containing protein n=2 Tax=Pelomonas sp. Root1237 TaxID=1736434 RepID=A0A0Q6WLZ9_9BURK) HSP 1 Score: 145 bits (366), Expect = 8.480e-38 Identity = 72/169 (42.60%), Postives = 105/169 (62.13%), Query Frame = 1
Query: 1 KGLIRFVVDIYPFELNSRRLHTSFEIFKEGIGLLPPPAFPSSFQQLDMIAAMSKMITVAQGGVDMVGLTYSSNELLDVKKDVGAKFRTFVKWNPDDLSQVFMQHPLTKGWLTIPSIRVDYTGGLSWIQHRLIRQHARQQYIEGGTYERLLRARQELYEMWMNPIARRNR 507
+G+ +FVV++YPF++N R+L F++F EGI PP FP L I+AM +++TV GGV++ GL + ELLD+++ G F+T VKW+PDDLS ++Q P TK ++ P Y GLSW QH LIR+ AR++ G E L +AR L+ WM +A + R
Sbjct: 346 RGIAQFVVEVYPFQINQRKLARPFDLFTEGIERRPPVHFPPDIDALRRISAMRRVLTVGPGGVELHGLPFGGPELLDMRRRYGKSFKTLVKWDPDDLSHAWIQDPETKEFVVSPCRWHHYAHGLSWNQHLLIRRFAREELKASGAIEYLEQARLRLHSHWMESVAWKTR 514 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57579.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57579.1.1 >prot_P-wetherbeei_contig57579.1.1 ID=prot_P-wetherbeei_contig57579.1.1|Name=mRNA_P-wetherbeei_contig57579.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp KGLIRFVVDIYPFELNSRRLHTSFEIFKEGIGLLPPPAFPSSFQQLDMIAback to top mRNA from alignment at P-wetherbeei_contig57579:3..509- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57579.1.1 ID=mRNA_P-wetherbeei_contig57579.1.1|Name=mRNA_P-wetherbeei_contig57579.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig57579:3..509- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57579:3..509- >mRNA_P-wetherbeei_contig57579.1.1 ID=mRNA_P-wetherbeei_contig57579.1.1|Name=mRNA_P-wetherbeei_contig57579.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig57579:3..509- (Phaeothamnion wetherbeei SAG_119_79)back to top |