mRNA_P-wetherbeei_contig5754.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5754.1.1
Unique NamemRNA_P-wetherbeei_contig5754.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5754.1.1 vs. uniprot
Match: D7G7R7_ECTSI (Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7R7_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 7.130e-23
Identity = 48/78 (61.54%), Postives = 59/78 (75.64%), Query Frame = 1
Query:    1 VDANDRDAEDVPLMHWSAINGREPICRYLLSRGADPGASGGVLNETALQWAARQGHVEVVMLLLTAGTNPLHLNIYGQ 234
            VD NDRDAEDVPL+HW+AIN R  + +YLL RGAD  A GGVL E+AL WAARQG++ +++ LL AG + L  N YGQ
Sbjct:   53 VDVNDRDAEDVPLLHWAAINDRRGVVKYLLKRGADTCAIGGVLKESALMWAARQGYMTIIVDLLQAGADCLQRNTYGQ 130          
BLAST of mRNA_P-wetherbeei_contig5754.1.1 vs. uniprot
Match: A0A6U0W6Y3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0W6Y3_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 3.190e-17
Identity = 39/76 (51.32%), Postives = 54/76 (71.05%), Query Frame = 1
Query:    7 ANDRDAEDVPLMHWSAINGREPICRYLLSRGADPGASGGVLNETALQWAARQGHVEVVMLLLTAGTNPLHLNIYGQ 234
            +N  D +   L+HW+AING   I  YLLS+GADP  SGGVL+E  LQWAAR+G ++V+ LL+ AG+   H+N+ G+
Sbjct:   36 SNAVDKDGCSLLHWAAINGHARITEYLLSQGADPNNSGGVLDEIPLQWAAREGKLQVMRLLVDAGSRLEHVNVQGR 111          
BLAST of mRNA_P-wetherbeei_contig5754.1.1 vs. uniprot
Match: D2A2T8_TRICA (Palmitoyltransferase n=3 Tax=Tenebrionidae TaxID=7065 RepID=D2A2T8_TRICA)

HSP 1 Score: 83.6 bits (205), Expect = 2.240e-16
Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 1
Query:   10 NDRDAEDVPLMHWSAINGREPICRYLLSRGADPGASGGVLNETALQWAARQGHVEVVMLLLTAGTNP 210
            N RD+E V L+HW+AIN R+ I RY + +GA+  A GG LN T L WA RQGH++ V++L+ AGT+P
Sbjct:   68 NQRDSETVTLLHWAAINNRKDIIRYFIEKGAEVDAVGGELNATPLHWATRQGHLDAVVILMNAGTDP 134          
BLAST of mRNA_P-wetherbeei_contig5754.1.1 vs. uniprot
Match: A0A653DTL2_CALMS (Uncharacterized protein n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653DTL2_CALMS)

HSP 1 Score: 80.1 bits (196), Expect = 8.420e-16
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 1
Query:   10 NDRDAEDVPLMHWSAINGREPICRYLLSRGADPGASGGVLNETALQWAARQGHVEVVMLLLTAGTNP 210
            N+RDAE+V L+HW+AIN R+ I  Y + +GA+  A GG LN T L WA RQGH+E  ++L+ +G +P
Sbjct:   68 NERDAENVTLLHWAAINNRKEIMGYFIEKGAEVDAIGGELNATPLHWATRQGHLEAAVILMNSGADP 134          
BLAST of mRNA_P-wetherbeei_contig5754.1.1 vs. uniprot
Match: UPI0018D05173 (palmitoyltransferase Hip14 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D05173)

HSP 1 Score: 81.6 bits (200), Expect = 1.060e-15
Identity = 40/69 (57.97%), Postives = 47/69 (68.12%), Query Frame = 1
Query:    4 DANDRDAEDVPLMHWSAINGREPICRYLLSRGADPGASGGVLNETALQWAARQGHVEVVMLLLTAGTNP 210
            D N  D E V L+HW+AIN R  I +YLLS+GA   A GG L  T LQWAARQGH+E V+LL  AG +P
Sbjct:   64 DVNQPDHETVTLLHWAAINNRREIIQYLLSKGAAVDAVGGELQATPLQWAARQGHLEAVVLLARAGADP 132          
BLAST of mRNA_P-wetherbeei_contig5754.1.1 vs. uniprot
Match: A0A6P6YD17_DERPT (Palmitoyltransferase n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6YD17_DERPT)

HSP 1 Score: 80.9 bits (198), Expect = 2.000e-15
Identity = 53/114 (46.49%), Postives = 68/114 (59.65%), Query Frame = 1
Query:    4 DANDRDAEDVPLMHWSAINGREPICRYLLSRGADPGASGGVLNETALQWAARQGHVEVVMLLLTAGTNPLHLNIYGQNGXXXXXXXXXXXXXXXXXXXXXXXVAPDDKGFMPLM 345
            D N RD E+V L+HW++IN R  +  Y +S+GA   A GG L  TAL WA RQGH+ +++LL+  G++P  L+  G N    XXXXXXXXXX           APD  G  PLM
Sbjct:  114 DVNQRDRENVTLLHWASINNRLELVNYFISKGAIVDAIGGDLQSTALHWATRQGHLPMIVLLMKYGSDPSLLDGDGYNALHLXXXXXXXXXXAYFIAKGQDIDAPDTNGMTPLM 227          
BLAST of mRNA_P-wetherbeei_contig5754.1.1 vs. uniprot
Match: A0A8J6HEY0_TENMO (DHHC domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HEY0_TENMO)

HSP 1 Score: 80.9 bits (198), Expect = 2.070e-15
Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = 1
Query:   10 NDRDAEDVPLMHWSAINGREPICRYLLSRGADPGASGGVLNETALQWAARQGHVEVVMLLLTAGTNP 210
            N RD+E V L+HW+AIN R+ I ++ + +GA+  A GG LN T L WA RQGH++ V++L+ AGT+P
Sbjct:  629 NQRDSETVTLLHWAAINNRKDIIKFFIEKGAEVDAVGGELNATPLHWATRQGHLDAVVILMNAGTDP 695          
BLAST of mRNA_P-wetherbeei_contig5754.1.1 vs. uniprot
Match: A0A653DVL8_CALMS (Uncharacterized protein n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653DVL8_CALMS)

HSP 1 Score: 80.1 bits (196), Expect = 2.320e-15
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 1
Query:   10 NDRDAEDVPLMHWSAINGREPICRYLLSRGADPGASGGVLNETALQWAARQGHVEVVMLLLTAGTNP 210
            N+RDAE+V L+HW+AIN R+ I  Y + +GA+  A GG LN T L WA RQGH+E  ++L+ +G +P
Sbjct:   68 NERDAENVTLLHWAAINNRKEIMGYFIEKGAEVDAIGGELNATPLHWATRQGHLEAAVILMNSGADP 134          
BLAST of mRNA_P-wetherbeei_contig5754.1.1 vs. uniprot
Match: A0A7M7JB50_VARDE (Palmitoyltransferase n=3 Tax=Varroa destructor TaxID=109461 RepID=A0A7M7JB50_VARDE)

HSP 1 Score: 80.1 bits (196), Expect = 3.630e-15
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 1
Query:   10 NDRDAEDVPLMHWSAINGREPICRYLLSRGADPGASGGVLNETALQWAARQGHVEVVMLLLTAGTNP 210
            N+RD E+V L+HW+AIN R  +  YL+SRGA   A GG L  T LQWA RQGH+ +V+LL+  G NP
Sbjct:   42 NERDCENVTLLHWAAINNRLELVHYLVSRGAIVDAIGGELESTPLQWAVRQGHLSMVVLLMKYGANP 108          
BLAST of mRNA_P-wetherbeei_contig5754.1.1 vs. uniprot
Match: A0A653DT33_CALMS (Palmitoyltransferase n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653DT33_CALMS)

HSP 1 Score: 80.1 bits (196), Expect = 3.640e-15
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 1
Query:   10 NDRDAEDVPLMHWSAINGREPICRYLLSRGADPGASGGVLNETALQWAARQGHVEVVMLLLTAGTNP 210
            N+RDAE+V L+HW+AIN R+ I  Y + +GA+  A GG LN T L WA RQGH+E  ++L+ +G +P
Sbjct:   68 NERDAENVTLLHWAAINNRKEIMGYFIEKGAEVDAIGGELNATPLHWATRQGHLEAAVILMNSGADP 134          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5754.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7R7_ECTSI7.130e-2361.54Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A6U0W6Y3_9STRA3.190e-1751.32Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
D2A2T8_TRICA2.240e-1653.73Palmitoyltransferase n=3 Tax=Tenebrionidae TaxID=7... [more]
A0A653DTL2_CALMS8.420e-1650.75Uncharacterized protein n=1 Tax=Callosobruchus mac... [more]
UPI0018D051731.060e-1557.97palmitoyltransferase Hip14 n=1 Tax=Plutella xylost... [more]
A0A6P6YD17_DERPT2.000e-1546.49Palmitoyltransferase n=1 Tax=Dermatophagoides pter... [more]
A0A8J6HEY0_TENMO2.070e-1550.75DHHC domain-containing protein n=1 Tax=Tenebrio mo... [more]
A0A653DVL8_CALMS2.320e-1550.75Uncharacterized protein n=1 Tax=Callosobruchus mac... [more]
A0A7M7JB50_VARDE3.630e-1555.22Palmitoyltransferase n=3 Tax=Varroa destructor Tax... [more]
A0A653DT33_CALMS3.640e-1550.75Palmitoyltransferase n=1 Tax=Callosobruchus macula... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5754contigP-wetherbeei_contig5754:242..753 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G7R7
Preferred nameZDHHC13
PFAMsAnk_2,Ank_3,Ank_4,Ank_5,DHHC
Model size348
Max annot lvl2759|Eukaryota
KEGG koko:K20032
KEGG TC9.B.37.1,9.B.37.3
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0001505,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0005798,GO:0006464,GO:0006497,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0006887,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007276,GO:0007283,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009059,GO:0009987,GO:0012505,GO:0015031,GO:0015075,GO:0015095,GO:0015318,GO:0015693,GO:0015833,GO:0016020,GO:0016079,GO:0016192,GO:0016234,GO:0016235,GO:0016409,GO:0016417,GO:0016740,GO:0016746,GO:0016747,GO:0017156,GO:0018345,GO:0019538,GO:0019706,GO:0019707,GO:0019953,GO:0022414,GO:0022857,GO:0022890,GO:0023052,GO:0023061,GO:0030001,GO:0030133,GO:0030660,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032504,GO:0032879,GO:0032880,GO:0032940,GO:0033036,GO:0034220,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042802,GO:0042886,GO:0042953,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044456,GO:0044464,GO:0044703,GO:0044872,GO:0045055,GO:0045184,GO:0045202,GO:0046873,GO:0046903,GO:0046907,GO:0048232,GO:0048489,GO:0048518,GO:0048522,GO:0048609,GO:0050708,GO:0050714,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0055085,GO:0065007,GO:0065008,GO:0070201,GO:0070382,GO:0070838,GO:0071702,GO:0071704,GO:0071705,GO:0072511,GO:0090087,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098791,GO:0098793,GO:0098805,GO:0098916,GO:0099003,GO:0099503,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0140096,GO:1901564,GO:1901566,GO:1901576,GO:1903530,GO:1903532,GO:1903830,GO:1904951
Exons2
Evalue1.17e-23
EggNOG OGsCOG5273@1|root,KOG0509@2759|Eukaryota
EC2.3.1.225
Descriptionprotein-cysteine S-palmitoyltransferase activity
Cds size348
COG categoryZ
BRITEko00000,ko01000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186853.236212-CDS-P-wetherbeei_contig5754:241..4271683186853.236212-CDS-P-wetherbeei_contig5754:241..427Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5754 242..427 -
1683186853.2482986-CDS-P-wetherbeei_contig5754:591..7531683186853.2482986-CDS-P-wetherbeei_contig5754:591..753Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5754 592..753 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5754.1.1prot_P-wetherbeei_contig5754.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5754 242..753 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5754.1.1

>prot_P-wetherbeei_contig5754.1.1 ID=prot_P-wetherbeei_contig5754.1.1|Name=mRNA_P-wetherbeei_contig5754.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=116bp
VDANDRDAEDVPLMHWSAINGREPICRYLLSRGADPGASGGVLNETALQW
AARQGHVEVVMLLLTAGTNPLHLNIYGQNGLHLAAQMGHTAVALLLLAHG
VSPVAPDDKGFMPLM*
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mRNA from alignment at P-wetherbeei_contig5754:242..753-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5754.1.1 ID=mRNA_P-wetherbeei_contig5754.1.1|Name=mRNA_P-wetherbeei_contig5754.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=512bp|location=Sequence derived from alignment at P-wetherbeei_contig5754:242..753- (Phaeothamnion wetherbeei SAG_119_79)
GTGGACGCGAACGATCGCGACGCGGAGGACGTGCCGCTGATGCACTGGTC TGCCATCAACGGCCGCGAACCTATTTGTCGCTATCTCTTATCTCGCGGAG CCGACCCTGGCGCCAGCGGCGGTGTCCTGAACGAGACGGCGTTGCAATGG GCGGCGCGGCAGGTGAGACGGCTTTACTTTGTTTGAGGCGACGCTACTGG CAGCTTCGGCCTGTTTGGTTCCCTTTTCGCCTCTCCAATGCGTATGCCAT GCCTACAATCTACGGCCCTCAAACAACGAAGAATTTGCTCATCTTCTTCT CCATCCCCTTTTCCCGTCTATTGCAGGGACATGTGGAGGTGGTTATGCTG CTGCTGACGGCCGGCACCAACCCCCTGCATCTAAATATTTATGGTCAAAA TGGGCTCCACCTGGCGGCTCAGATGGGGCACACGGCCGTGGCACTTTTGC TGCTGGCACACGGCGTCTCGCCCGTGGCCCCCGACGACAAGGGCTTCATG CCGCTCATGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5754:242..753-

>mRNA_P-wetherbeei_contig5754.1.1 ID=mRNA_P-wetherbeei_contig5754.1.1|Name=mRNA_P-wetherbeei_contig5754.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig5754:242..753- (Phaeothamnion wetherbeei SAG_119_79)
GTGGACGCGAACGATCGCGACGCGGAGGACGTGCCGCTGATGCACTGGTC
TGCCATCAACGGCCGCGAACCTATTTGTCGCTATCTCTTATCTCGCGGAG
CCGACCCTGGCGCCAGCGGCGGTGTCCTGAACGAGACGGCGTTGCAATGG
GCGGCGCGGCAGGGACATGTGGAGGTGGTTATGCTGCTGCTGACGGCCGG
CACCAACCCCCTGCATCTAAATATTTATGGTCAAAATGGGCTCCACCTGG
CGGCTCAGATGGGGCACACGGCCGTGGCACTTTTGCTGCTGGCACACGGC
GTCTCGCCCGTGGCCCCCGACGACAAGGGCTTCATGCCGCTCATGTGA
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