mRNA_P-wetherbeei_contig5752.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5752.1.1
Unique NamemRNA_P-wetherbeei_contig5752.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5752.1.1 vs. uniprot
Match: A0A6H5L2P2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2P2_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 3.950e-46
Identity = 103/252 (40.87%), Postives = 154/252 (61.11%), Query Frame = 1
Query:   16 LLRFLPPDMVEQFRLLSDPMTVARLTEVVLDERRRPFAVVGGQ-RLFLWPDEPSKVVMAAQLAALAAALEADGTLGPDRWCGFDGHLGRVSVLRNGKGA-VSGLSFRVGRYVRGVADHLADLFL---GSPPPPVTAQQTLHPPRSILVLGARGAGKTTVLRDVCRRLSEVWGVMVVDTAGQICGDGDVPHEASVGLSRRMVVAEREAQHKVMLKTLQNHTPDVIVVDEIAGADEAAACAKIRSRGVCLIAGA 756
            +L+ +P + +E++   S    +  L E+VLDE RRP+A + G+ +LFL  D+ S VV    +  +   L+ +     D   G  G L R+SV+R+ +   + G++ R+GRY  G A  + D+     GSP  P  A        S+LVLG  G+GKTTVLRD+CR++S+   V++VDT+ +I GDG +PH A++G SRRM+V  +  QH VM + LQNHTP  IVVDE++  +EA AC  I++RGV ++A A
Sbjct:  518 ILKRIPEEFLEEYLTESHLQNLQDLNELVLDEGRRPYATLQGRGKLFLCSDK-SVVVTKEHIDMVVGRLDLEDKFAGDNRAGVPGQLHRISVMRSREARRIFGVTLRIGRYFSGSASLVDDVLFHVQGSPDKPERAA-------SVLVLGKPGSGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKAGQHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKARGVRVVASA 761          
BLAST of mRNA_P-wetherbeei_contig5752.1.1 vs. uniprot
Match: A0A1W0A2D8_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2D8_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.110e-43
Identity = 99/252 (39.29%), Postives = 146/252 (57.94%), Query Frame = 1
Query:    1 DDAASLLRFLPPDMVEQFRLLSDPMTVARLTEVVLDERRRPFAVVGGQRLFLWPDEPSKVVMAAQLAALAAALEADGTLGPDRWCGFDGHLGRVSVLRNGKGAVSGLSFRVGRYVRGVADHLADLFLGSPPPPVTAQQTLHPPRSILVLGARGAGKTTVLRDVCRRLSEVWGVMVVDTAGQICGDGDVPHEASVGLSRRMVVAEREAQHKVMLKTLQNHTPDVIVVDEIAGADEAAACAKIRSRGVCLIAGA 756
            +D + +L  LP D+V Q   LSD  T + L ++VLD  RRP+A   G R+ L  D+  ++     L  +   +E  G  G D   G +  L R+S +RN  G + GL+ RVGRY+ G A  +AD+          A Q     ++IL LG  G GKTT++R+V R+L+    V +VDT+ +I GDGD+PH   VGLSRR++V   + Q +VM++ +QNHTP+++V+DEI   +E  A    + RGV +IA A
Sbjct:  200 EDLSEILALLPEDLVLQ---LSDTSTASGLLDIVLDRGRRPWAWAHGARILLGDDD--RITSQEDLDGI---IEKVGGFGTDNRAGLERQLHRISAIRNRTGGIMGLTIRVGRYIEGNASLIADIL---------ADQD----KNILFLGEPGCGKTTIVREVARQLANSHNVCIVDTSNEIAGDGDIPHPC-VGLSRRLMVPSLDQQARVMVECVQNHTPEIMVIDEIGRPNEVEAARTCKQRGVRMIASA 429          
BLAST of mRNA_P-wetherbeei_contig5752.1.1 vs. uniprot
Match: A0A6G0XL58_9STRA (AAA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XL58_9STRA)

HSP 1 Score: 165 bits (418), Expect = 6.520e-43
Identity = 103/252 (40.87%), Postives = 146/252 (57.94%), Query Frame = 1
Query:    1 DDAASLLRFLPPDMVEQFRLLSDPMTVARLTEVVLDERRRPFAVVGGQRLFLWPDEPSKVVMAAQLAALAAALEADGTLGPDRWCGFDGHLGRVSVLRNGKGAVSGLSFRVGRYVRGVADHLADLFLGSPPPPVTAQQTLHPPRSILVLGARGAGKTTVLRDVCRRLSEVWGVMVVDTAGQICGDGDVPHEASVGLSRRMVVAEREAQHKVMLKTLQNHTPDVIVVDEIAGADEAAACAKIRSRGVCLIAGA 756
            +D + LL  LPPD+      LS P     L+++VLD+   P+A + G RL L  D  S+VV    L A+ A +   G  G D   G +G L RVS +RN +  + GL+ RVGR++ G++  + D+              LH   ++L LG  G GKTT++RDV R LS+   V +VDT+ +I GDGDVPH   VG++RR++V   +AQ  VM++ +QNHTP+VIV+DEI  A E  A    + RGV +IA A
Sbjct:  852 EDLSPLLSLLPPDLAAP---LSAPRVTLSLSDIVLDKGCCPWATIAGSRLVLGDD--SRVVTNQDLDAIVANV---GGFGSDNRAGLEGQLHRVSAVRNRRNEIVGLTLRVGRHIPGLSALILDI--------------LHSDANVLFLGEPGCGKTTIVRDVARELSQSSIVCIVDTSNEIAGDGDVPHPC-VGMARRIMVPSLDAQSSVMVECVQNHTPEVIVIDEIGRASEVEAARTCKQRGVRIIASA 1080          
BLAST of mRNA_P-wetherbeei_contig5752.1.1 vs. uniprot
Match: A0A1V9YTH6_9STRA (AAA domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YTH6_9STRA)

HSP 1 Score: 161 bits (407), Expect = 5.730e-42
Identity = 99/252 (39.29%), Postives = 141/252 (55.95%), Query Frame = 1
Query:    1 DDAASLLRFLPPDMVEQFRLLSDPMTVARLTEVVLDERRRPFAVVGGQRLFLWPDEPSKVVMAAQLAALAAALEADGTLGPDRWCGFDGHLGRVSVLRNGKGAVSGLSFRVGRYVRGVADHLADLFLGSPPPPVTAQQTLHPPRSILVLGARGAGKTTVLRDVCRRLSEVWGVMVVDTAGQICGDGDVPHEASVGLSRRMVVAEREAQHKVMLKTLQNHTPDVIVVDEIAGADEAAACAKIRSRGVCLIAGA 756
            +D  ++L  LP D+ E  R   D     RL ++VLD  R+P+A VGG R FL  ++   V        L    EA G  G D   G +  L RVS +RN  G + GL+ R GRY+ G A  +AD+                  +S+L LG  G GKTT++R+V R+L+  + V +VDT+ +I GDG++PH   VGL+RRM+V   + Q  VM+K +QNHTP+V+V+DEI  A+E  A    + RGV ++A A
Sbjct:  326 EDLDTILGLLPDDLAEPLR---DDAVKCRLQDIVLDLGRQPWAWVGGARFFLAGNDERTVTQ----ENLDEITEAVGGFGSDDRAGLERQLHRVSAVRNRLGEIMGLTIRAGRYIEGNASMIADILAAKN-------------KSVLFLGEPGCGKTTIVREVSRQLAAKYNVCIVDTSNEIAGDGNIPHPC-VGLARRMMVPSLDKQAAVMVKVVQNHTPEVMVIDEIGRANEVEAARTCKQRGVRIVASA 556          
BLAST of mRNA_P-wetherbeei_contig5752.1.1 vs. uniprot
Match: T0QB44_SAPDV (AAA domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QB44_SAPDV)

HSP 1 Score: 160 bits (404), Expect = 5.080e-41
Identity = 99/252 (39.29%), Postives = 144/252 (57.14%), Query Frame = 1
Query:    1 DDAASLLRFLPPDMVEQFRLLSDPMTVARLTEVVLDERRRPFAVVGGQRLFLWPDEPSKVVMAAQLAALAAALEADGTLGPDRWCGFDGHLGRVSVLRNGKGAVSGLSFRVGRYVRGVADHLADLFLGSPPPPVTAQQTLHPPRSILVLGARGAGKTTVLRDVCRRLSEVWGVMVVDTAGQICGDGDVPHEASVGLSRRMVVAEREAQHKVMLKTLQNHTPDVIVVDEIAGADEAAACAKIRSRGVCLIAGA 756
            +D   +L  LP D+V     L  P   ++L ++VLD  RRP+A V G R FL      +VV    L A+   +   G  G D   G +  L R+S +RN +  +  L+ RVGRY+ G A  +ADL          A +     +SIL LG  G GKTT++R+V R L+  + V +VDT+ +I GDGDVPH A VGL+RRM+V   +AQ ++M++ +QNHTP+++V+DEI   +E  A    + RGV ++A A
Sbjct: 1204 EDLDDILGLLPSDLVAP---LLQPGVASKLLDIVLDLGRRPWAWVDGARCFLDVQHEDRVVTRDDLDAIVDRV---GGFGSDNRAGLERQLHRISAIRNRQDVIIALTIRVGRYIEGHAGLIADLL---------AMED----KSILFLGEPGCGKTTIVREVSRHLATTYNVCIVDTSNEIAGDGDVPH-ACVGLARRMMVPSLDAQARIMVECVQNHTPEIMVIDEIGRPNEVEAARTCKQRGVRIVASA 1435          
BLAST of mRNA_P-wetherbeei_contig5752.1.1 vs. uniprot
Match: T0QQD8_SAPDV (AAA domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QQD8_SAPDV)

HSP 1 Score: 160 bits (404), Expect = 5.230e-41
Identity = 99/252 (39.29%), Postives = 145/252 (57.54%), Query Frame = 1
Query:    1 DDAASLLRFLPPDMVEQFRLLSDPMTVARLTEVVLDERRRPFAVVGGQRLFLWPDEPSKVVMAAQLAALAAALEADGTLGPDRWCGFDGHLGRVSVLRNGKGAVSGLSFRVGRYVRGVADHLADLFLGSPPPPVTAQQTLHPPRSILVLGARGAGKTTVLRDVCRRLSEVWGVMVVDTAGQICGDGDVPHEASVGLSRRMVVAEREAQHKVMLKTLQNHTPDVIVVDEIAGADEAAACAKIRSRGVCLIAGA 756
            +D   +L  LPPD+      L  P   A+L ++VLD  RRP+A V G R FL P+   +VV    L ++   +E  G  G D   G +  L R+S +RN +  +  L+ RVGRY+ G A  +ADL          A +     ++IL LG  G GKTT++R+V R+L+  + V +VDT+ +I GDGD+PH   VGL+RRM+V   + Q  VM++ +QNHTP+V+V+DEI   +E  A    + RGV ++A A
Sbjct: 1677 EDLDDILGLLPPDLAAP---LLQPEVSAKLLDIVLDIGRRPWAWVNGARFFLDPNNHDRVVTRDDLDSI---VERVGGFGSDNRAGLERQLHRISAIRNRQDRIIALTIRVGRYIEGNAGLIADLL---------AMED----KNILFLGEPGCGKTTIVREVSRQLATKYNVCIVDTSNEIAGDGDIPHPC-VGLARRMMVPSLDDQAAVMVECVQNHTPEVMVIDEIGRPNEVEAARTCKQRGVRIVASA 1908          
BLAST of mRNA_P-wetherbeei_contig5752.1.1 vs. uniprot
Match: A0A7S4FX53_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FX53_9EUGL)

HSP 1 Score: 159 bits (403), Expect = 6.060e-41
Identity = 110/253 (43.48%), Postives = 143/253 (56.52%), Query Frame = 1
Query:    1 DDAASLLRFLPPDMVEQFRLLSDPMTVARLTEVVLDERRRPFAVVGGQRLFLWPDEP--SKVVMAAQLAALAAALEADGTLGPDRWCGFDGHLGRVSVLRNGKGAVSGLSFRVGRYVRGVADHLADLFLGSPPPPVTAQQTLHPPRSILVLGARGAGKTTVLRDVCRRLSEVWG--VMVVDTAGQICGDGDVPHEASVGLSRRMVVAEREAQHKVMLKTLQNHTPDVIVVDEIAGADEAAACAKIRSRGVCLI 747
            DD  SLL  LP D+  +  L + P   + L EVVLD  R+PFA  GG R     DE    K+V A +L      L   G  G D   G  G L R+S +RN  G + GL+ RVGR   G  D + DL              L  P SIL LG  G GKTTVLR+V R+LS+V+   V++VDT+ +I GDGD+PH A +G +RRM V   + QH+VM++ ++NH P+VI++DEI   +EA AC  I  RGV LI
Sbjct:  549 DDMESLLHVLPKDV--RATLANHPNR-SNLLEVVLDLGRQPFARFGGVR----GDESLREKIVTADELETAERRL---GAFGGDNRAGLPGTLHRISAIRNRLGGIIGLTCRVGRATSGRVDIIKDL--------------LETPTSILFLGPPGVGKTTVLREVARQLSDVYKMRVVIVDTSNEIGGDGDIPHPA-IGSARRMQVQSPQEQHRVMIEAVENHMPEVIIIDEIGTEEEAQACRTIAERGVILI 776          
BLAST of mRNA_P-wetherbeei_contig5752.1.1 vs. uniprot
Match: T0QDY4_SAPDV (AAA domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QDY4_SAPDV)

HSP 1 Score: 159 bits (403), Expect = 6.660e-41
Identity = 99/252 (39.29%), Postives = 144/252 (57.14%), Query Frame = 1
Query:    1 DDAASLLRFLPPDMVEQFRLLSDPMTVARLTEVVLDERRRPFAVVGGQRLFLWPDEPSKVVMAAQLAALAAALEADGTLGPDRWCGFDGHLGRVSVLRNGKGAVSGLSFRVGRYVRGVADHLADLFLGSPPPPVTAQQTLHPPRSILVLGARGAGKTTVLRDVCRRLSEVWGVMVVDTAGQICGDGDVPHEASVGLSRRMVVAEREAQHKVMLKTLQNHTPDVIVVDEIAGADEAAACAKIRSRGVCLIAGA 756
            +D   +L  LPPD+      L  P   A+L ++VLD  RRP+A V G R FL P    +VV    L ++   +E  G  G D   G +  L R+S +RN +  +  L+ RVGRY+ G A  +ADL          A +     ++IL LG  G GKTT++R+V R+L+  + V +VDT+ +I GDGD+PH   VGL+RRM+V   + Q  VM++ +QNHTP+V+V+DEI   +E  A    + RGV ++A A
Sbjct:  886 EDLDDILGLLPPDLAAP---LLQPEVSAKLLDIVLDLGRRPWAWVNGARFFLDPSNHDRVVTRDDLDSI---VERVGGFGSDNRAGLERQLHRISAIRNRQDRIIALTIRVGRYIEGNAGLIADLL---------AMED----KNILFLGEPGCGKTTIVREVSRQLATKYNVCIVDTSNEIAGDGDIPHPC-VGLARRMMVPSLDDQAAVMVECVQNHTPEVMVIDEIGRPNEVEAARTCKQRGVRIVASA 1117          
BLAST of mRNA_P-wetherbeei_contig5752.1.1 vs. uniprot
Match: T0PZ04_SAPDV (AAA domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PZ04_SAPDV)

HSP 1 Score: 159 bits (403), Expect = 6.900e-41
Identity = 99/252 (39.29%), Postives = 144/252 (57.14%), Query Frame = 1
Query:    1 DDAASLLRFLPPDMVEQFRLLSDPMTVARLTEVVLDERRRPFAVVGGQRLFLWPDEPSKVVMAAQLAALAAALEADGTLGPDRWCGFDGHLGRVSVLRNGKGAVSGLSFRVGRYVRGVADHLADLFLGSPPPPVTAQQTLHPPRSILVLGARGAGKTTVLRDVCRRLSEVWGVMVVDTAGQICGDGDVPHEASVGLSRRMVVAEREAQHKVMLKTLQNHTPDVIVVDEIAGADEAAACAKIRSRGVCLIAGA 756
            +D   +L  LPPD+      L  P   A+L ++VLD  RRP+A V G R FL P    +VV    L ++   +E  G  G D   G +  L R+S +RN +  +  L+ RVGRY+ G A  +ADL          A +     ++IL LG  G GKTT++R+V R+L+  + V +VDT+ +I GDGD+PH   VGL+RRM+V   + Q  VM++ +QNHTP+V+V+DEI   +E  A    + RGV ++A A
Sbjct: 1204 EDLDDILGLLPPDLAAP---LLQPEVSAKLLDIVLDLGRRPWAWVNGARFFLDPSNHDRVVTRDDLDSI---VERVGGFGSDNRAGLERQLHRISAIRNRQDRIIALTIRVGRYIEGNAGLIADLL---------AMED----KNILFLGEPGCGKTTIVREVSRQLATKYNVCIVDTSNEIAGDGDIPHPC-VGLARRMMVPSLDDQAAVMVECVQNHTPEVMVIDEIGRPNEVEAARTCKQRGVRIVASA 1435          
BLAST of mRNA_P-wetherbeei_contig5752.1.1 vs. uniprot
Match: A0A0L0FJ09_9EUKA (AAA domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FJ09_9EUKA)

HSP 1 Score: 152 bits (384), Expect = 7.440e-41
Identity = 99/274 (36.13%), Postives = 147/274 (53.65%), Query Frame = 1
Query:    1 DDAASLLRFLPPDMVEQFRLLSDPMTVARLTEVVLDERRRPFAVVGGQRLFL---------------------WPDEPSKVVMA-AQLAALAAALEADGTLGPDRWCGFDGHLGRVSVLRNGKGAVSGLSFRVGRYVRGVADHLADLFLGSPPPPVTAQQTLHPPRSILVLGARGAGKTTVLRDVCRRLSEVWGVMVVDTAGQICGDGDVPHEASVGLSRRMVVAEREAQHKVMLKTLQNHTPDVIVVDEIAGADEAAACAKIRSRGVCLIAGA 756
            DD  +LL+ LP   +   R L DP T   LT++V+D  RRP    G +R++L                     W   P  +V+  + +  +   L      G D   G DG L R+S LR+  G + GL+ RVG+ + G A  L+D+ L                +SILVLGA G+GKT ++R++ R LS+   V+VVDT+ +I GDGDVPH+  +G +RR+ V    +Q +++++ +QNHTP VIV+DEI  A+E  A   ++ RGV +IA A
Sbjct:   16 DDVKTLLQLLPEAYL---RPLIDPNTWKGLTDIVMDVGRRPTLTYGSERVYLFDSPIEPQPHAAHTTNSHRHAWNQSPEHIVVTKSHIEEVVDRLGGKQKFGSDNRAGTDGSLHRISALRSRSGEILGLTCRVGKTITGGAHSLSDVLLNGN-------------KSILVLGAPGSGKTALIREIARILSQQSNVLVVDTSNEIAGDGDVPHKC-IGHARRVQVPGAHSQDRLLIEVVQNHTPQVIVIDEIGRANEVHATRTVKQRGVRMIASA 272          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5752.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2P2_9PHAE3.950e-4640.87AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A1W0A2D8_9STRA1.110e-4339.29AAA domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A6G0XL58_9STRA6.520e-4340.87AAA domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A1V9YTH6_9STRA5.730e-4239.29AAA domain-containing protein n=1 Tax=Achlya hypog... [more]
T0QB44_SAPDV5.080e-4139.29AAA domain-containing protein n=1 Tax=Saprolegnia ... [more]
T0QQD8_SAPDV5.230e-4139.29AAA domain-containing protein n=1 Tax=Saprolegnia ... [more]
A0A7S4FX53_9EUGL6.060e-4143.48Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
T0QDY4_SAPDV6.660e-4139.29AAA domain-containing protein n=1 Tax=Saprolegnia ... [more]
T0PZ04_SAPDV6.900e-4139.29AAA domain-containing protein n=1 Tax=Saprolegnia ... [more]
A0A0L0FJ09_9EUKA7.440e-4136.13AAA domain-containing protein (Fragment) n=1 Tax=S... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5752contigP-wetherbeei_contig5752:1605..2977 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog112098.XP_008610206.1
PFAMsAAA,DNA_pol_A_exo1,T2SSE
Model size756
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue8.58e-42
EggNOG OGsCOG3854@1|root,2QQ4X@2759|Eukaryota
DescriptionATPases associated with a variety of cellular activities
Cds size756
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186852.974109-CDS-P-wetherbeei_contig5752:1604..17091683186852.974109-CDS-P-wetherbeei_contig5752:1604..1709Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5752 1605..1709 -
1683186852.9928417-CDS-P-wetherbeei_contig5752:2025..21331683186852.9928417-CDS-P-wetherbeei_contig5752:2025..2133Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5752 2026..2133 -
1683186853.003436-CDS-P-wetherbeei_contig5752:2344..24791683186853.003436-CDS-P-wetherbeei_contig5752:2344..2479Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5752 2345..2479 -
1683186853.0139499-CDS-P-wetherbeei_contig5752:2569..29771683186853.0139499-CDS-P-wetherbeei_contig5752:2569..2977Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5752 2570..2977 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5752.1.1prot_P-wetherbeei_contig5752.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5752 1605..2977 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5752.1.1

>prot_P-wetherbeei_contig5752.1.1 ID=prot_P-wetherbeei_contig5752.1.1|Name=mRNA_P-wetherbeei_contig5752.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp
DDAASLLRFLPPDMVEQFRLLSDPMTVARLTEVVLDERRRPFAVVGGQRL
FLWPDEPSKVVMAAQLAALAAALEADGTLGPDRWCGFDGHLGRVSVLRNG
KGAVSGLSFRVGRYVRGVADHLADLFLGSPPPPVTAQQTLHPPRSILVLG
ARGAGKTTVLRDVCRRLSEVWGVMVVDTAGQICGDGDVPHEASVGLSRRM
VVAEREAQHKVMLKTLQNHTPDVIVVDEIAGADEAAACAKIRSRGVCLIA
GA
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mRNA from alignment at P-wetherbeei_contig5752:1605..2977-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5752.1.1 ID=mRNA_P-wetherbeei_contig5752.1.1|Name=mRNA_P-wetherbeei_contig5752.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1373bp|location=Sequence derived from alignment at P-wetherbeei_contig5752:1605..2977- (Phaeothamnion wetherbeei SAG_119_79)
GACGACGCGGCGTCGCTCCTCCGGTTCCTCCCGCCAGACATGGTGGAACA ATTCCGTCTCCTGTCAGACCCAATGACCGTGGCCCGGTTGACTGAGGTCG TCCTGGACGAGCGTCGGCGCCCCTTCGCAGTCGTGGGCGGCCAGCGCCTC TTCCTGTGGCCGGACGAGCCGTCCAAAGTGGTGATGGCAGCGCAGCTGGC TGCTCTGGCGGCGGCGCTCGAAGCCGACGGCACGCTTGGCCCGGACCGCT GGTGCGGCTTTGACGGGCATCTCGGACGCGTCAGCGTGCTGCGCAACGGC AAGGGCGCCGTCAGCGGCCTCAGCTTCCGTGTCGGCCGCTATGTCCGCGG CGTAGCCGACCACCTCGCCGACCTTTTTCTCGGCTCGCCGCCGCCTCCCG TTACGGCGGTTACGGCGGTTTCAGCAGGTTCGGCGGGGAAAGAAGCTGCT GCGGCGGCGGCGGCAGCGGCGGCGGCGACGGCGACGCTGGGCAGGCAGCA GCAGACGCTGCACCCGCCACGGTCAATTCTCGTGTTGGGGGCGCGCGGCG CCGGCAAGACGACCGTGCTGCGGGACGTTTGCCGGCGGCTGTCGGAGGTA TGGGGCGTCATGGTCGTCGACACCGCCGGCCAGGTAACGCCAGAAGTCCT TTTGTTTGCTTGAGCAGGGGCTCACCTTTCTGTCTCAGCTAAACTGCTAT CATAATCATTTGATACGCCAGATTACAGATTACGACGTCACTGTTAATTC TTTCTTGCTTCCTTGCTTACTCTTGTCATGCTGCGCCGCTGCCGCCGCCG CCACCGACACATTTTCGCTGTTATTTTACCATACGTGCTGGCAGATCTGC GGTGACGGCGACGTGCCCCACGAGGCCTCAGTGGGCCTGTCGCGCCGCAT GGTGGTGGCGGAGCGCGAGGCGCAGCACAAGGTCATGCTCAAGACACTGC AGGTGAGAGCAATAGAGGGCGGATGGCCCTCTCTTGGCTTCCGTTAGCTG GAAGTACCCGAACTGTTGTTTGAAAGCATTGCCTATCCACGCTTTGCTTT TCTCCCGCTCGATTGAACCAACCAGAGCGCGCTTGCCGCCTGGAGCGAGG CTTCTGAAGCGGGATCTAGCCGGTTACATGTTCTTTCGCTCCCTTACCCG AACACGCTCTTTGGCACCCTTAGCATACCAACGACATTCCTCTTTTTTCT TTTTAACCTGTCCTGTTGCATTTGTTCTTCCTCTTTTGGCTTCCTTCTTG GTCCCGCGTCCGTGCCAGAACCACACGCCGGACGTGATTGTCGTGGACGA AATCGCGGGGGCGGATGAGGCGGCGGCCTGCGCCAAGATCCGCAGCCGCG GCGTCTGTCTCATCGCCGGCGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5752:1605..2977-

>mRNA_P-wetherbeei_contig5752.1.1 ID=mRNA_P-wetherbeei_contig5752.1.1|Name=mRNA_P-wetherbeei_contig5752.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig5752:1605..2977- (Phaeothamnion wetherbeei SAG_119_79)
GACGACGCGGCGTCGCTCCTCCGGTTCCTCCCGCCAGACATGGTGGAACA
ATTCCGTCTCCTGTCAGACCCAATGACCGTGGCCCGGTTGACTGAGGTCG
TCCTGGACGAGCGTCGGCGCCCCTTCGCAGTCGTGGGCGGCCAGCGCCTC
TTCCTGTGGCCGGACGAGCCGTCCAAAGTGGTGATGGCAGCGCAGCTGGC
TGCTCTGGCGGCGGCGCTCGAAGCCGACGGCACGCTTGGCCCGGACCGCT
GGTGCGGCTTTGACGGGCATCTCGGACGCGTCAGCGTGCTGCGCAACGGC
AAGGGCGCCGTCAGCGGCCTCAGCTTCCGTGTCGGCCGCTATGTCCGCGG
CGTAGCCGACCACCTCGCCGACCTTTTTCTCGGCTCGCCGCCGCCTCCCG
TTACGGCGCAGCAGACGCTGCACCCGCCACGGTCAATTCTCGTGTTGGGG
GCGCGCGGCGCCGGCAAGACGACCGTGCTGCGGGACGTTTGCCGGCGGCT
GTCGGAGGTATGGGGCGTCATGGTCGTCGACACCGCCGGCCAGATCTGCG
GTGACGGCGACGTGCCCCACGAGGCCTCAGTGGGCCTGTCGCGCCGCATG
GTGGTGGCGGAGCGCGAGGCGCAGCACAAGGTCATGCTCAAGACACTGCA
GAACCACACGCCGGACGTGATTGTCGTGGACGAAATCGCGGGGGCGGATG
AGGCGGCGGCCTGCGCCAAGATCCGCAGCCGCGGCGTCTGTCTCATCGCC
GGCGCG
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