mRNA_P-wetherbeei_contig57498.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57498.1.1 vs. uniprot
Match: A0A3C1L786_9ACTN (HTH merR-type domain-containing protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A3C1L786_9ACTN) HSP 1 Score: 138 bits (347), Expect = 9.450e-37 Identity = 70/96 (72.92%), Postives = 85/96 (88.54%), Query Frame = 1
Query: 223 DAYVAGELCKEAGITDEQLLELESFGLVAGKGTGRSALYTAADVAVAKAAAGFLAHGVGGRHLRAWRQAADREAALYEQLILPLLRQRNPQARQQA 510
D YVA ELC AGIT +QL ELES+GL++G+GTG +ALY+A D+A+A+AAAGFLA GV RHLRAWRQAA+REAAL+EQL+LPL+RQRNPQ+RQQA
Sbjct: 194 DTYVASELCTMAGITSKQLAELESYGLLSGRGTGTNALYSAGDLAIARAAAGFLARGVEPRHLRAWRQAAEREAALFEQLVLPLIRQRNPQSRQQA 289
BLAST of mRNA_P-wetherbeei_contig57498.1.1 vs. uniprot
Match: A0A7K1B065_9ACTN (MerR family DNA-binding transcriptional regulator n=2 Tax=root TaxID=1 RepID=A0A7K1B065_9ACTN) HSP 1 Score: 124 bits (312), Expect = 2.060e-31 Identity = 62/97 (63.92%), Postives = 77/97 (79.38%), Query Frame = 1
Query: 220 SDAYVAGELCKEAGITDEQLLELESFGLVAGKGTGRSALYTAADVAVAKAAAGFLAHGVGGRHLRAWRQAADREAALYEQLILPLLRQRNPQARQQA 510
SD Y E+C AG+T QL +LESFGLV G+GTG S +T +D+A+ +AAAGFL+ G+ RHLRAWRQ+A+REA L+EQ ILPLLRQRNPQARQ+A
Sbjct: 211 SDVYDRSEICSMAGVTQTQLADLESFGLVTGRGTGSSTTFTESDLAIVRAAAGFLSRGIDARHLRAWRQSAEREAGLFEQRILPLLRQRNPQARQEA 307
BLAST of mRNA_P-wetherbeei_contig57498.1.1 vs. uniprot
Match: A0A6J6R6R3_9ZZZZ (Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A6J6R6R3_9ZZZZ) HSP 1 Score: 122 bits (306), Expect = 8.340e-31 Identity = 64/94 (68.09%), Postives = 74/94 (78.72%), Query Frame = 1
Query: 229 YVAGELCKEAGITDEQLLELESFGLVAGKGTGRSALYTAADVAVAKAAAGFLAHGVGGRHLRAWRQAADREAALYEQLILPLLRQRNPQARQQA 510
Y A ELC A IT QL ELESFGL+ +GTG SALYT +D+ +A+A GFL GV RHLRAWRQAADREAAL+EQL+ PL+RQRNPQ+RQQA
Sbjct: 182 YNANELCIHANITGRQLTELESFGLITPRGTGTSALYTNSDLGIARACKGFLERGVEPRHLRAWRQAADREAALFEQLVTPLIRQRNPQSRQQA 275
BLAST of mRNA_P-wetherbeei_contig57498.1.1 vs. uniprot
Match: A0A6I3CC09_9ACTN (MerR family DNA-binding transcriptional regulator n=3 Tax=root TaxID=1 RepID=A0A6I3CC09_9ACTN) HSP 1 Score: 107 bits (266), Expect = 1.730e-24 Identity = 81/173 (46.82%), Postives = 105/173 (60.69%), Query Frame = 1
Query: 1 PAAQVRLAA---PPVMSLVGSRSEPASPVVAAAIASPSPAPVVAEPLAPVAADPEPELVRTTAASSPAPAGGRHASSDAYVAGELCKEAGITDEQLLELESFGLVAGKGTGRSALYTAADVAVAKAAAGFLAHGVGGRHLRAWRQAADREAALYEQLILPLLRQRNPQARQQA 510
PAA V A+ PPV+++VG+ +EPA P SP+ V A+P PVAA ++ A P G S D EL A I++EQL EL+ F +V +GTG A Y A V +A+ AA FL G+ RHLR+WRQAA+RE+AL+EQ I+PLLRQRNPQ+RQQA
Sbjct: 183 PAAPVEAASASTPPVLTVVGA-NEPAEP-------SPAAPKVAAKPAQPVAAVKPAVATKSPAVDLP----GLPYSRD-----ELRLAAEISEEQLRELDEFAIVPSRGTGADATYQADAVDIARIAARFLEQGIDARHLRSWRQAAERESALFEQRIMPLLRQRNPQSRQQA 338
BLAST of mRNA_P-wetherbeei_contig57498.1.1 vs. uniprot
Match: A0A6J7E8W7_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J7E8W7_9ZZZZ) HSP 1 Score: 102 bits (253), Expect = 1.460e-22 Identity = 54/94 (57.45%), Postives = 67/94 (71.28%), Query Frame = 1
Query: 229 YVAGELCKEAGITDEQLLELESFGLVAGKGTGRSALYTAADVAVAKAAAGFLAHGVGGRHLRAWRQAADREAALYEQLILPLLRQRNPQARQQA 510
Y EL +GIT+ QL EL+ FG+V +G+G A Y A V +A+ A FLA G+ RHLR WRQ A+REAAL+EQ I+PLLRQRNPQ+RQQA
Sbjct: 257 YNRDELLTASGITEAQLSELDEFGIVPSRGSGADATYQADAVEIARVAGKFLAQGIDARHLRPWRQGAEREAALFEQRIMPLLRQRNPQSRQQA 350
BLAST of mRNA_P-wetherbeei_contig57498.1.1 vs. uniprot
Match: A0A7X7DA29_9ACTN (MerR family transcriptional regulator n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7DA29_9ACTN) HSP 1 Score: 91.7 bits (226), Expect = 4.230e-19 Identity = 48/92 (52.17%), Postives = 63/92 (68.48%), Query Frame = 1
Query: 235 AGELCKEAGITDEQLLELESFGLVAGKGTGRSALYTAADVAVAKAAAGFLAHGVGGRHLRAWRQAADREAALYEQLILPLLRQRNPQARQQA 510
A EL AG+T+E L ELE FGLV G+ G Y + +A+ AA F+ HG+G RHLR ++ AA+REA EQL +PLL+QRNP+AR+QA
Sbjct: 185 AAELQAAAGLTEESLRELEKFGLVVGRAMGDDTYYDGDALVIARKAASFIDHGIGARHLRMYKVAAEREAGFLEQLAMPLLKQRNPEARRQA 276
BLAST of mRNA_P-wetherbeei_contig57498.1.1 vs. uniprot
Match: A0A5Q2RLE9_9ACTN (MerR family DNA-binding transcriptional regulator n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RLE9_9ACTN) HSP 1 Score: 90.9 bits (224), Expect = 7.340e-19 Identity = 46/90 (51.11%), Postives = 68/90 (75.56%), Query Frame = 1
Query: 241 ELCKEAGITDEQLLELESFGLVAGKGTGRSALYTAADVAVAKAAAGFLAHGVGGRHLRAWRQAADREAALYEQLILPLLRQRNPQARQQA 510
EL + AGIT EQ+ +LE FGL+ G+ G + L+ + + VA+ A+GF+ HGV GRHLR +R AA+REA+ ++Q+++P L+QR+P ARQQA
Sbjct: 179 ELAEAAGITVEQVADLERFGLLTGRSIGPTTLFDESALDVARLASGFIRHGVEGRHLRMYRVAAEREASFFQQVVMPQLKQRHPAARQQA 268
BLAST of mRNA_P-wetherbeei_contig57498.1.1 vs. uniprot
Match: A0A7W0HAU7_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0HAU7_9ACTN) HSP 1 Score: 86.7 bits (213), Expect = 3.310e-18 Identity = 43/90 (47.78%), Postives = 64/90 (71.11%), Query Frame = 1
Query: 241 ELCKEAGITDEQLLELESFGLVAGKGTGRSALYTAADVAVAKAAAGFLAHGVGGRHLRAWRQAADREAALYEQLILPLLRQRNPQARQQA 510
EL +G+ ++ L ELE FG++ G+ G + Y ++VA AAGF+ +GV RHLR ++ AADREA +EQ+++P+L+QRNPQAR+QA
Sbjct: 61 ELASASGLGEDDLKELERFGILTGRRVGANVYYDEEALSVAGMAAGFMKYGVEARHLRMYKTAADREAGFFEQVVMPMLKQRNPQARRQA 150
BLAST of mRNA_P-wetherbeei_contig57498.1.1 vs. uniprot
Match: A0A537ZH02_9ACTN (MerR family transcriptional regulator n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537ZH02_9ACTN) HSP 1 Score: 88.2 bits (217), Expect = 9.190e-18 Identity = 56/121 (46.28%), Postives = 78/121 (64.46%), Query Frame = 1
Query: 154 EPELVRTTAASSPAPAGGRHASSDAYVA-GELCKEAGITDEQLLELESFGLV-AGKGTGRSALYTAADVAVAKAAAGFLAHGVGGRHLRAWRQAADREAALYEQLILPLLRQRNPQARQQA 510
+P V T ++P+ GG A + + EL + AG+T+ Q+ ELES+GL+ A GT A Y A VAK A+GF+ HGV RHLR + A+REA LY QL+LPL++QRNPQ+R++A
Sbjct: 165 DPLDVSITGGTTPSDDGGSSADARRELTRSELARVAGLTEHQIDELESYGLLRAISGTADGASYGAEAEVVAKLASGFIRHGVQARHLRVYLHTAEREAGLYAQLLLPLVKQRNPQSREKA 285
BLAST of mRNA_P-wetherbeei_contig57498.1.1 vs. uniprot
Match: A0A6J7TB44_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J7TB44_9ZZZZ) HSP 1 Score: 84.7 bits (208), Expect = 1.120e-17 Identity = 50/107 (46.73%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 190 PAPAGGRHASSDAYVAGELCKEAGITDEQLLELESFGLVAGKGTGRSALYTAADVAVAKAAAGFLAHGVGGRHLRAWRQAADREAALYEQLILPLLRQRNPQARQQA 510
P+ A GR A+ Y EL + + + +E L ELESF +V TG ALY D+A+A+ A F GV RHL+AW+ AA+REA L+EQ +LPLLR+R+P++RQ++
Sbjct: 21 PSDAVGRPAT---YTRAELLQLSDLQEEVLAELESFHMVTAHQTGSQALYDEHDLAIAEVARAFTEAGVDVRHLKAWKTAAEREAGLFEQRVLPLLRRRSPESRQES 124 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57498.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57498.1.1 >prot_P-wetherbeei_contig57498.1.1 ID=prot_P-wetherbeei_contig57498.1.1|Name=mRNA_P-wetherbeei_contig57498.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp PAAQVRLAAPPVMSLVGSRSEPASPVVAAAIASPSPAPVVAEPLAPVAADback to top mRNA from alignment at P-wetherbeei_contig57498:2..511+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57498.1.1 ID=mRNA_P-wetherbeei_contig57498.1.1|Name=mRNA_P-wetherbeei_contig57498.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig57498:2..511+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57498:2..511+ >mRNA_P-wetherbeei_contig57498.1.1 ID=mRNA_P-wetherbeei_contig57498.1.1|Name=mRNA_P-wetherbeei_contig57498.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig57498:2..511+ (Phaeothamnion wetherbeei SAG_119_79)back to top |