mRNA_P-wetherbeei_contig57491.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57491.1.1 vs. uniprot
Match: A0A371B864_9HYPH (Methyl-accepting transducer domain-containing protein n=1 Tax=Pseudolabrys sp. GY_H TaxID=2292256 RepID=A0A371B864_9HYPH) HSP 1 Score: 171 bits (434), Expect = 3.580e-48 Identity = 100/170 (58.82%), Postives = 126/170 (74.12%), Query Frame = 1
Query: 1 RRQLVADMADGKSTSTEVTTPEGRILLVRNRGMIGGGWVGSHDDITDQRHAELERASMQKQQDRRALIEQAIAAFRQRVEEHLHAASAGAMAMRTTAATLRATSERSSSNAAGAVSASNEACANVETAAVAADELATSIGEIGRQLSLTTDIVQVAVVEAKGTNNQIDAL 510
R QL+ADM K+ + EV TP+GR+L +RN+G+ GGGWVGSH+DIT +R AE ER ++Q Q +RRA IE AI FR R++E L AAS GA MR TAA L A S R+SS A AVSA++EA NVETA+VA+D+LA+SI EI RQL++TTDIV+ AV E +G N QI L
Sbjct: 137 RHQLIADMRQLKAVNNEVETPDGRLLSIRNQGLPGGGWVGSHEDITQRREAERERENLQAQANRRAAIELAITTFRSRIDEQLRAASEGARTMRATAAALFANSGRTSSGANTAVSAAHEASTNVETASVASDQLASSIVEIARQLTVTTDIVRGAVDETRGANAQIGGL 306
BLAST of mRNA_P-wetherbeei_contig57491.1.1 vs. uniprot
Match: A0A0Q7TPD1_9HYPH (Methyl-accepting transducer domain-containing protein n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TPD1_9HYPH) HSP 1 Score: 163 bits (412), Expect = 6.030e-45 Identity = 96/170 (56.47%), Postives = 123/170 (72.35%), Query Frame = 1
Query: 1 RRQLVADMADGKSTSTEVTTPEGRILLVRNRGMIGGGWVGSHDDITDQRHAELERASMQKQQDRRALIEQAIAAFRQRVEEHLHAASAGAMAMRTTAATLRATSERSSSNAAGAVSASNEACANVETAAVAADELATSIGEIGRQLSLTTDIVQVAVVEAKGTNNQIDAL 510
RRQL+ DM K+ + EV P+GR+L + N+G+ GGGWVGSH+DIT +R AE ER ++Q Q RR I+ AIAAFR ++E L A + A AMRTTA TL A S R+ S AA AVS S+EA +VETAA+A+DELA+SI EI RQLS+TT IV+ AV E +GTN Q+ +L
Sbjct: 137 RRQLIEDMRQLKAMTAEVRAPDGRLLQISNQGLPGGGWVGSHEDITARREAEREREALQVQSKRREAIDAAIAAFRVHIDEQLQAVTESARAMRTTATTLSANSGRTLSGAASAVSTSHEAATSVETAAIASDELASSIVEIARQLSVTTTIVRGAVDETRGTNAQVVSL 306
BLAST of mRNA_P-wetherbeei_contig57491.1.1 vs. uniprot
Match: A0A345ZY09_9HYPH (Methyl-accepting transducer domain-containing protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZY09_9HYPH) HSP 1 Score: 161 bits (408), Expect = 2.440e-44 Identity = 95/170 (55.88%), Postives = 125/170 (73.53%), Query Frame = 1
Query: 1 RRQLVADMADGKSTSTEVTTPEGRILLVRNRGMIGGGWVGSHDDITDQRHAELERASMQKQQDRRALIEQAIAAFRQRVEEHLHAASAGAMAMRTTAATLRATSERSSSNAAGAVSASNEACANVETAAVAADELATSIGEIGRQLSLTTDIVQVAVVEAKGTNNQIDAL 510
+R++ A+GK+T+TEV + GR +++ NR M GGWV +H+D+T++R A ERA +Q+Q +RRA +EQAIA FRQ+VE HLH+ S A+ MR TAATL S +++ A AV ASNEA NV+TAA AADELA SIGEIGRQL+ TD+V+ AV EA+GTN QI AL
Sbjct: 141 QRRVSTANAEGKTTTTEVVS-NGRRVVIVNRPMPDGGWVATHEDVTERRDAARERAVLQEQAERRATVEQAIAGFRQQVEAHLHSVSDSAVVMRGTAATLLTNSAQTAKGAESAVGASNEASVNVDTAATAADELAKSIGEIGRQLAKATDVVRAAVSEAQGTNAQITAL 309
BLAST of mRNA_P-wetherbeei_contig57491.1.1 vs. uniprot
Match: UPI0010BE8AAB (PAS-domain containing protein n=1 Tax=Pseudolabrys sp. FHR47 TaxID=2562284 RepID=UPI0010BE8AAB) HSP 1 Score: 154 bits (389), Expect = 1.330e-41 Identity = 93/170 (54.71%), Postives = 118/170 (69.41%), Query Frame = 1
Query: 1 RRQLVADMADGKSTSTEVTTPEGRILLVRNRGMIGGGWVGSHDDITDQRHAELERASMQKQQDRRALIEQAIAAFRQRVEEHLHAASAGAMAMRTTAATLRATSERSSSNAAGAVSASNEACANVETAAVAADELATSIGEIGRQLSLTTDIVQVAVVEAKGTNNQIDAL 510
RR+L+ DM K+T+ EV P GR+L + N+G+ GGGWVGSH+DIT++R A LER ++Q Q RRA I+ AIAAFR R++E L AAS GA MR TA TL A S R+S+ A AVSAS EA AN ELA+SI EI RQL++TTDIV+ AV E +G ++QI L
Sbjct: 135 RRKLIDDMRQLKTTNVEVKAPNGRLLQISNQGLPGGGWVGSHEDITERREAALERENLQAQASRRAAIDSAIAAFRSRIDEQLRAASDGARTMRATATTLFANSGRTSTGANTAVSASEEASANXXXXXXXXXELASSIVEIARQLTVTTDIVRGAVDETRGASSQIGRL 304
BLAST of mRNA_P-wetherbeei_contig57491.1.1 vs. uniprot
Match: A0A537N8P1_9PROT (Methyl-accepting transducer domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N8P1_9PROT) HSP 1 Score: 142 bits (359), Expect = 1.890e-37 Identity = 82/170 (48.24%), Postives = 120/170 (70.59%), Query Frame = 1
Query: 1 RRQLVADMADGKSTSTEVTTPEGRILLVRNRGMIGGGWVGSHDDITDQRHAELERASMQKQQDRRALIEQAIAAFRQRVEEHLHAASAGAMAMRTTAATLRATSERSSSNAAGAVSASNEACANVETAAVAADELATSIGEIGRQLSLTTDIVQVAVVEAKGTNNQIDAL 510
RR L+A +++GK+TS + + GR + V NR M GGGWVG+H+DIT++ +R M ++ RR L+E AIAAFR+R+++ L + A A AM+ TA+ L +S ++ AV+AS+EA ++V TA+VAADEL TSI EIGRQL+LT ++VQ AV EA+ T+ +I+AL
Sbjct: 105 RRNLLAALSEGKTTSNVLDSGSGRTIAVINRPMAGGGWVGTHEDITERELLHKQRDEMAAREQRRVLVEAAIAAFRERMDKLLQSVEASADAMKATASKLSGSSSETTEQTEDAVNASSEASSSVRTASVAADELITSIAEIGRQLNLTNNVVQAAVNEARATDGEIEAL 274
BLAST of mRNA_P-wetherbeei_contig57491.1.1 vs. uniprot
Match: A0A346A2L2_9HYPH (Methyl-accepting transducer domain-containing protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A2L2_9HYPH) HSP 1 Score: 135 bits (340), Expect = 1.130e-34 Identity = 80/169 (47.34%), Postives = 114/169 (67.46%), Query Frame = 1
Query: 4 RQLVADMADGKSTSTEVTTPEGRILLVRNRGMIGGGWVGSHDDITDQRHAELERASMQKQQDRRALIEQAIAAFRQRVEEHLHAASAGAMAMRTTAATLRATSERSSSNAAGAVSASNEACANVETAAVAADELATSIGEIGRQLSLTTDIVQVAVVEAKGTNNQIDAL 510
++++ M G+S V +GRI+ V+N + GGGWV +H+D+T+QR AE ERA+++ Q+ RRA++E AI++FR VE+ L A AMR TA TL S+++S A AV A NEA NV+TAA+AADEL+ SI EI RQLS T +IV +A EA+ T+ +I +L
Sbjct: 108 QRILDSMKHGESAPHYVQASDGRIVHVKNEPLPGGGWVSTHEDVTEQRRAEQERAAIRDQEQRRAIVESAISSFRPTVEQLLSRVGDSATAMRATAGTLLGFSDQTSQRADSAVHAFNEASTNVQTAAIAADELSRSIAEISRQLSRTNNIVDLATQEARATDQEIASL 276
BLAST of mRNA_P-wetherbeei_contig57491.1.1 vs. uniprot
Match: A0A371B491_9HYPH (Methyl-accepting transducer domain-containing protein n=1 Tax=Pseudolabrys sp. GY_H TaxID=2292256 RepID=A0A371B491_9HYPH) HSP 1 Score: 126 bits (317), Expect = 2.310e-31 Identity = 78/160 (48.75%), Postives = 105/160 (65.62%), Query Frame = 1
Query: 31 GKSTSTEVTTPEGRILLVRNRGMIGGGWVGSHDDITDQRHAELERASMQKQQDRRALIEQAIAAFRQRVEEHLHAASAGAMAMRTTAATLRATSERSSSNAAGAVSASNEACANVETAAVAADELATSIGEIGRQLSLTTDIVQVAVVEAKGTNNQIDAL 510
G V +GRI+L RN + GGWV +H+D+T QR+AELERA+ + + RRA ++ AI AFR E+ L S GA MRTTA+ L S+++S A A A EA ANVETAA+AA++L+ SIGEI RQLS T+DIV+ A EA+ T+++I L
Sbjct: 116 GSDMGAYVPASDGRIVLARNEALSDGGWVSTHEDVTQQRNAELERAANRDTEKRRAAVDGAIVAFRPVAEDLLLRVSEGASTMRTTASALFDASDKTSQCADSAAQAFTEASANVETAAIAAEQLSQSIGEISRQLSHTSDIVKQATDEARATDSEIGQL 275
BLAST of mRNA_P-wetherbeei_contig57491.1.1 vs. uniprot
Match: A0A0Q7TN58_9HYPH (Methyl-accepting transducer domain-containing protein n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TN58_9HYPH) HSP 1 Score: 121 bits (303), Expect = 2.340e-29 Identity = 74/160 (46.25%), Postives = 104/160 (65.00%), Query Frame = 1
Query: 31 GKSTSTEVTTPEGRILLVRNRGMIGGGWVGSHDDITDQRHAELERASMQKQQDRRALIEQAIAAFRQRVEEHLHAASAGAMAMRTTAATLRATSERSSSNAAGAVSASNEACANVETAAVAADELATSIGEIGRQLSLTTDIVQVAVVEAKGTNNQIDAL 510
G V +GRI+L +N + GGWV +H+D+T+Q AELERA+ + + RRAL++ AIA F+QRVE+ L A A AMR TA L +S+++S A AV A NEA NV+TAAVA +EL+ SI EI RQL+ T+D+V++ EA+ + +I L
Sbjct: 116 GNDMGAYVPASDGRIVLAKNEPLDDGGWVSTHEDVTEQHKAELERAASRDAERRRALVDGAIADFQQRVEKILSRVGASAAAMRATANGLLGSSDKTSQCANTAVDAFNEASVNVDTAAVATEELSQSIAEISRQLTHTSDVVRLTTEEARSIDGEISGL 275
BLAST of mRNA_P-wetherbeei_contig57491.1.1 vs. uniprot
Match: A0A1W6ZK69_9HYPH (Methyl-accepting transducer domain-containing protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZK69_9HYPH) HSP 1 Score: 115 bits (288), Expect = 3.360e-27 Identity = 73/163 (44.79%), Postives = 100/163 (61.35%), Query Frame = 1
Query: 22 MADGKSTSTEVTTPEGRILLVRNRGMIGGGWVGSHDDITDQRHAELERASMQKQQDRRALIEQAIAAFRQRVEEHLHAASAGAMAMRTTAATLRATSERSSSNAAGAVSASNEACANVETAAVAADELATSIGEIGRQLSLTTDIVQVAVVEAKGTNNQIDAL 510
+A GK T VT+ +GR++ V + M G WV +H D+T+Q+ E ERA+ ++ RRALIE AI +FR ++ L + A M+ TA++L A S ++S A AV ASNEA NV DE+A+SIGEI RQL TTD+V+ AV EA+ TN I L
Sbjct: 118 IASGKGGITNVTSVKGRVIAVTEQPMPDGSWVATHQDVTEQQKLEQERATHAVEEQRRALIESAITSFRGSMDSVLRTVNESAATMKLTASSLFAASGQTSQRAESAVQASNEASTNVXXXXXXXDEMASSIGEISRQLVQTTDVVRHAVREAQSTNESIKGL 280
BLAST of mRNA_P-wetherbeei_contig57491.1.1 vs. uniprot
Match: A0A127EU43_9HYPH (Methyl-accepting chemotaxis protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EU43_9HYPH) HSP 1 Score: 112 bits (281), Expect = 3.110e-26 Identity = 73/143 (51.05%), Postives = 92/143 (64.34%), Query Frame = 1
Query: 10 LVADMADGKSTSTEVTTPEGRILLVRNRGMIGGGWVGSHDDITDQRHAELERASMQKQQDRRALIEQAIAAFRQRVEEHLHAASAGAMAMRTTAATLRATSERSSSNAAGAVSASNEACANVETAAVAADELATSIGEIGRQL 438
L+A +A+GK T T V EGR + + NR M GGGWV +H+D+T+Q AEL R +M+ + RR IE+AIA FR RVE L + A AM+TTA L SE++S A AV +SNEA NV AA AA EL+ SIGEI QL
Sbjct: 109 LLATIANGK-TVTSVRENEGRFIQLANRPMPGGGWVATHEDVTEQHQAELARTAMRAVEGRRTAIEEAIAGFRTRVESVLKTVADSAAAMQTTAGGLLKESEKTSQRAQSAVRSSNEASTNVAVAATAAAELSASIGEISEQL 250 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57491.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57491.1.1 >prot_P-wetherbeei_contig57491.1.1 ID=prot_P-wetherbeei_contig57491.1.1|Name=mRNA_P-wetherbeei_contig57491.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=163bp MADGKSTSTEVTTPEGRILLVRNRGMIGGGWVGSHDDITDQRHAELERASback to top mRNA from alignment at P-wetherbeei_contig57491:2..511+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57491.1.1 ID=mRNA_P-wetherbeei_contig57491.1.1|Name=mRNA_P-wetherbeei_contig57491.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig57491:2..511+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57491:2..511+ >mRNA_P-wetherbeei_contig57491.1.1 ID=mRNA_P-wetherbeei_contig57491.1.1|Name=mRNA_P-wetherbeei_contig57491.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=489bp|location=Sequence derived from alignment at P-wetherbeei_contig57491:2..511+ (Phaeothamnion wetherbeei SAG_119_79)back to top |