mRNA_P-wetherbeei_contig57467.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig57467.1.1
Unique NamemRNA_P-wetherbeei_contig57467.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig57467.1.1 vs. uniprot
Match: A0A356KHY6_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356KHY6_9BACT)

HSP 1 Score: 119 bits (297), Expect = 4.560e-31
Identity = 57/85 (67.06%), Postives = 66/85 (77.65%), Query Frame = 1
Query:    1 LERSSRYVAWARVLGGEFEDLKRARRTGRPSVLDTYGATNPAEFFAVATESFFEQPARLKRKHPELYDELKRYYHQDPIRQFAQP 255
            LE  S Y+AWARVL  E+EDL+ A    R +VLD YGATNPAEFFAVATE FFE+P +L RKHPELY+ELKRYY QDP+ +F  P
Sbjct:  174 LEERSHYLAWARVLSEEYEDLQEAAEKRRKTVLDKYGATNPAEFFAVATECFFEKPRQLSRKHPELYEELKRYYRQDPL-EFKPP 257          
BLAST of mRNA_P-wetherbeei_contig57467.1.1 vs. uniprot
Match: A0A518H9T3_9BACT (Protein MtfA n=1 Tax=Tautonia plasticadhaerens TaxID=2527974 RepID=A0A518H9T3_9BACT)

HSP 1 Score: 117 bits (293), Expect = 1.980e-30
Identity = 58/90 (64.44%), Postives = 68/90 (75.56%), Query Frame = 1
Query:    1 LERSSRYVAWARVLGGEFEDLKRARRTGRPSVLDTYGATNPAEFFAVATESFFEQPARLKRKHPELYDELKRYYHQDPIRQFAQPSATPA 270
            L + SRYV WARVLG E++ L++    G PSVLD YGATNPAEFFAVATE FFE+PARL+R+HPEL++ELK YY QDP R F      PA
Sbjct:  176 LGQRSRYVTWARVLGAEYDRLRQEAGRGVPSVLDAYGATNPAEFFAVATECFFERPARLRREHPELFEELKGYYRQDPDR-FLGTEPRPA 264          
BLAST of mRNA_P-wetherbeei_contig57467.1.1 vs. uniprot
Match: A0A1N6KP03_9BACT (Uncharacterized protein n=1 Tax=Singulisphaera sp. GP187 TaxID=1882752 RepID=A0A1N6KP03_9BACT)

HSP 1 Score: 117 bits (292), Expect = 2.610e-30
Identity = 54/83 (65.06%), Postives = 65/83 (78.31%), Query Frame = 1
Query:    1 LERSSRYVAWARVLGGEFEDLKRARRTGRPSVLDTYGATNPAEFFAVATESFFEQPARLKRKHPELYDELKRYYHQDPIRQFA 249
            LE  S YVAWARVLG E+E L+   +  R +VLDTYGATNPAEFFAVATE FFE+P +L++KHP LY+ELK YY QDP ++ A
Sbjct:  174 LEHRSSYVAWARVLGSEYEQLRADEQQQRKTVLDTYGATNPAEFFAVATECFFEKPVQLRKKHPALYEELKEYYRQDPEQRLA 256          
BLAST of mRNA_P-wetherbeei_contig57467.1.1 vs. uniprot
Match: L0DEL2_SINAD (Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) TaxID=886293 RepID=L0DEL2_SINAD)

HSP 1 Score: 117 bits (292), Expect = 3.110e-30
Identity = 57/91 (62.64%), Postives = 66/91 (72.53%), Query Frame = 1
Query:    1 LERSSRYVAWARVLGGEFEDLKRARRTGRPSVLDTYGATNPAEFFAVATESFFEQPARLKRKHPELYDELKRYYHQDPIRQFAQPSATPAD 273
            LER S YVAWAR LG E+E L+      R +VLDTYGATNPAEFFAVATE FFE+P +L++KHP LY+ELK YY QDP  Q    +A P D
Sbjct:  174 LERRSSYVAWARALGAEYEQLREDEAQQRKTVLDTYGATNPAEFFAVATECFFEKPVQLRKKHPALYEELKEYYRQDP-EQLLLAAAEPPD 263          
BLAST of mRNA_P-wetherbeei_contig57467.1.1 vs. uniprot
Match: UPI0012608AF5 (zinc-dependent peptidase n=1 Tax=Tautonia marina TaxID=2653855 RepID=UPI0012608AF5)

HSP 1 Score: 115 bits (289), Expect = 6.850e-30
Identity = 54/85 (63.53%), Postives = 67/85 (78.82%), Query Frame = 1
Query:    1 LERSSRYVAWARVLGGEFEDLKRARRTGRPSVLDTYGATNPAEFFAVATESFFEQPARLKRKHPELYDELKRYYHQDP--IRQFA 249
            LE+ S+YV+WARVLG E+E L++    GRPSVLD YGATNPAEFFAVATE +FE+P  L+R HPEL++EL+ YYH DP  IR+  
Sbjct:  176 LEQRSQYVSWARVLGNEYEQLRQDASLGRPSVLDRYGATNPAEFFAVATECYFEKPKELQRSHPELFEELRAYYHFDPTEIRELG 260          
BLAST of mRNA_P-wetherbeei_contig57467.1.1 vs. uniprot
Match: A0A0S8DV73_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Phycisphaerae bacterium SG8_4 TaxID=1703409 RepID=A0A0S8DV73_9BACT)

HSP 1 Score: 112 bits (280), Expect = 1.360e-29
Identity = 51/78 (65.38%), Postives = 65/78 (83.33%), Query Frame = 1
Query:    1 LERSSRYVAWARVLGGEFEDLKRARRTGRPSVLDTYGATNPAEFFAVATESFFEQPARLKRKHPELYDELKRYYHQDP 234
            LE  SRYVAWARVLG E+E L+R+++  R SV++ YGATNPAEFFAVATE+FFE+  ++K++HPELYDEL+ YY  DP
Sbjct:   82 LEHRSRYVAWARVLGAEYERLQRSKKKHRRSVMNQYGATNPAEFFAVATETFFEKAKQMKKRHPELYDELREYYKLDP 159          
BLAST of mRNA_P-wetherbeei_contig57467.1.1 vs. uniprot
Match: A0A533QF30_9BACT (Inner membrane protein n=1 Tax=Candidatus Jettenia ecosi TaxID=2494326 RepID=A0A533QF30_9BACT)

HSP 1 Score: 111 bits (277), Expect = 3.880e-28
Identity = 52/80 (65.00%), Postives = 62/80 (77.50%), Query Frame = 1
Query:    1 LERSSRYVAWARVLGGEFEDLKRARRTGRPSVLDTYGATNPAEFFAVATESFFEQPARLKRKHPELYDELKRYYHQDPIR 240
            LER S YVAWAR+LG E+  L++  + G  S LD YGATNPAEFFAVATE FFE+  +LK+KHPELY+ELK YY QDP +
Sbjct:  173 LERRSMYVAWARILGAEYVQLQKDVQDGHKSTLDDYGATNPAEFFAVATECFFEKALQLKKKHPELYEELKLYYRQDPAQ 252          
BLAST of mRNA_P-wetherbeei_contig57467.1.1 vs. uniprot
Match: A0A0M2UPN7_9BACT (Protein MtfA n=2 Tax=Candidatus Brocadia TaxID=380240 RepID=A0A0M2UPN7_9BACT)

HSP 1 Score: 110 bits (276), Expect = 5.350e-28
Identity = 53/80 (66.25%), Postives = 63/80 (78.75%), Query Frame = 1
Query:    1 LERSSRYVAWARVLGGEFEDLKRARRTGRPSVLDTYGATNPAEFFAVATESFFEQPARLKRKHPELYDELKRYYHQDPIR 240
            L R S YVAWARVLG E+  L++  + GR ++LD YGATNPAEFFAVATE FFE+  +LKRKHPELY+ELK YY QDP +
Sbjct:  172 LPRRSMYVAWARVLGAEYLHLQQDAKHGRRTMLDKYGATNPAEFFAVATECFFEKAIQLKRKHPELYEELKLYYQQDPAQ 251          
BLAST of mRNA_P-wetherbeei_contig57467.1.1 vs. uniprot
Match: A0A523CPL9_9BACT (Zinc-dependent peptidase n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A523CPL9_9BACT)

HSP 1 Score: 110 bits (276), Expect = 5.840e-28
Identity = 50/82 (60.98%), Postives = 61/82 (74.39%), Query Frame = 1
Query:    1 LERSSRYVAWARVLGGEFEDLKRARRTGRPSVLDTYGATNPAEFFAVATESFFEQPARLKRKHPELYDELKRYYHQDPIRQF 246
            +ER S Y+AWARVLG E+   ++    GR +V+D YGATNPAEFFAV TE FFE+P +LKRKHPELY+E   YY QDP R +
Sbjct:  173 MERRSMYLAWARVLGAEYAKFRKDTEHGRRTVMDRYGATNPAEFFAVVTECFFEKPVQLKRKHPELYEEFMLYYQQDPTRFY 254          
BLAST of mRNA_P-wetherbeei_contig57467.1.1 vs. uniprot
Match: A0A1V6LZU4_9BACT (Uncharacterized protein n=4 Tax=Planctomycetes TaxID=203682 RepID=A0A1V6LZU4_9BACT)

HSP 1 Score: 110 bits (275), Expect = 7.380e-28
Identity = 54/80 (67.50%), Postives = 62/80 (77.50%), Query Frame = 1
Query:    1 LERSSRYVAWARVLGGEFEDLKRARRTGRPSVLDTYGATNPAEFFAVATESFFEQPARLKRKHPELYDELKRYYHQDPIR 240
            L R S YVAWARVLG E+  L++    GR +VLD YGATNPAEFFAVATE FFE+  +LKRKHPELY+ELK YY QDP +
Sbjct:  172 LPRRSMYVAWARVLGAEYVRLQQDAEHGRKTVLDKYGATNPAEFFAVATECFFEKAEQLKRKHPELYEELKLYYLQDPAQ 251          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57467.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A356KHY6_9BACT4.560e-3167.06Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A518H9T3_9BACT1.980e-3064.44Protein MtfA n=1 Tax=Tautonia plasticadhaerens Tax... [more]
A0A1N6KP03_9BACT2.610e-3065.06Uncharacterized protein n=1 Tax=Singulisphaera sp.... [more]
L0DEL2_SINAD3.110e-3062.64Uncharacterized protein n=1 Tax=Singulisphaera aci... [more]
UPI0012608AF56.850e-3063.53zinc-dependent peptidase n=1 Tax=Tautonia marina T... [more]
A0A0S8DV73_9BACT1.360e-2965.38Uncharacterized protein (Fragment) n=1 Tax=Phycisp... [more]
A0A533QF30_9BACT3.880e-2865.00Inner membrane protein n=1 Tax=Candidatus Jettenia... [more]
A0A0M2UPN7_9BACT5.350e-2866.25Protein MtfA n=2 Tax=Candidatus Brocadia TaxID=380... [more]
A0A523CPL9_9BACT5.840e-2860.98Zinc-dependent peptidase n=2 Tax=Planctomycetes Ta... [more]
A0A1V6LZU4_9BACT7.380e-2867.50Uncharacterized protein n=4 Tax=Planctomycetes Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57467contigP-wetherbeei_contig57467:2..286 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog886293.Sinac_3436
PFAMsPeptidase_M90,SEC-C
Model size285
Max annot lvl203682|Planctomycetes
KEGG koko:K09933
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.11e-31
EggNOG OGsCOG3228@1|root,COG3228@2|Bacteria,2IZES@203682|Planctomycetes
DescriptionBelongs to the MtfA family
Cds size285
COG categoryS
BRITEko00000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186852.2401228-CDS-P-wetherbeei_contig57467:1..2861683186852.2401228-CDS-P-wetherbeei_contig57467:1..286Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig57467 2..286 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57467.1.1prot_P-wetherbeei_contig57467.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig57467 2..286 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig57467.1.1

>prot_P-wetherbeei_contig57467.1.1 ID=prot_P-wetherbeei_contig57467.1.1|Name=mRNA_P-wetherbeei_contig57467.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=95bp
LERSSRYVAWARVLGGEFEDLKRARRTGRPSVLDTYGATNPAEFFAVATE
SFFEQPARLKRKHPELYDELKRYYHQDPIRQFAQPSATPADDID*
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mRNA from alignment at P-wetherbeei_contig57467:2..286+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig57467.1.1 ID=mRNA_P-wetherbeei_contig57467.1.1|Name=mRNA_P-wetherbeei_contig57467.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig57467:2..286+ (Phaeothamnion wetherbeei SAG_119_79)
CTGGAACGCTCCAGCCGCTACGTGGCCTGGGCCCGCGTGCTGGGTGGCGA GTTCGAGGACCTCAAGCGAGCCCGCCGCACGGGACGACCGAGCGTGCTGG ATACCTACGGCGCGACCAATCCCGCCGAGTTCTTCGCCGTCGCCACTGAA AGCTTTTTTGAGCAGCCCGCCCGCCTGAAACGCAAGCACCCGGAACTCTA CGACGAGTTGAAACGCTACTATCACCAGGACCCGATTCGCCAGTTCGCCC AGCCGTCGGCAACCCCCGCCGATGACATTGACTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig57467:2..286+

>mRNA_P-wetherbeei_contig57467.1.1 ID=mRNA_P-wetherbeei_contig57467.1.1|Name=mRNA_P-wetherbeei_contig57467.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig57467:2..286+ (Phaeothamnion wetherbeei SAG_119_79)
CTGGAACGCTCCAGCCGCTACGTGGCCTGGGCCCGCGTGCTGGGTGGCGA
GTTCGAGGACCTCAAGCGAGCCCGCCGCACGGGACGACCGAGCGTGCTGG
ATACCTACGGCGCGACCAATCCCGCCGAGTTCTTCGCCGTCGCCACTGAA
AGCTTTTTTGAGCAGCCCGCCCGCCTGAAACGCAAGCACCCGGAACTCTA
CGACGAGTTGAAACGCTACTATCACCAGGACCCGATTCGCCAGTTCGCCC
AGCCGTCGGCAACCCCCGCCGATGACATTGACTGA
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