mRNA_P-wetherbeei_contig57447.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57447.1.1 vs. uniprot
Match: A0A845BDP4_9PROT (ABC transporter substrate-binding protein n=1 Tax=Roseomonas coralli TaxID=2545983 RepID=A0A845BDP4_9PROT) HSP 1 Score: 164 bits (415), Expect = 5.060e-45 Identity = 73/124 (58.87%), Postives = 91/124 (73.39%), Query Frame = 1
Query: 1 ESLFLYALPVLPVDPQSSFGGAAYAQWFASNGAIGIKPTDAALLKGFEMFRSATNKPAEMRNEVAKELWKLLVDEVWSIGLVGQSPAYMGTRVVNERLENVPARTCVSQHCRTPWSGHPEQWFY 372
E+L+L+ VLPVDP AYA W+ASNGA G +P + + + F + R+AT++ RNE AKE+WKL VD+ W IGLVG SPA+MG RVVN +LENVPART +SQHCRTPW GHPEQWF+
Sbjct: 549 ENLYLFPRYVLPVDPLGGVMSNAYAAWYASNGAQGKQPAEPEMQRAFALMRAATSQKEAERNETAKEIWKLAVDQQWGIGLVGLSPAFMGVRVVNRKLENVPARTAISQHCRTPWGGHPEQWFF 672
BLAST of mRNA_P-wetherbeei_contig57447.1.1 vs. uniprot
Match: UPI00192E1A3F (ABC transporter substrate-binding protein n=2 Tax=Belnapia TaxID=365532 RepID=UPI00192E1A3F) HSP 1 Score: 164 bits (415), Expect = 5.060e-45 Identity = 74/125 (59.20%), Postives = 91/125 (72.80%), Query Frame = 1
Query: 1 ESLFLYALPVLPVDPQSSFGGAAYAQWFASNGAIGIKPTDAALLKGFEMFRSATNKPAEMRNEVAKELWKLLVDEVWSIGLVGQSPAYMGTRVVNERLENVPARTCVSQHCRTPWSGHPEQWFYK 375
ESL+LY LPVDP + G YA WFASNG GI+P + +LK F++ R+AT + E RN A+E+WKL VD+ W IGLVG SPA+MG RVV+ERLENVP RT +SQH RTPW HPEQW++K
Sbjct: 549 ESLYLYPRYCLPVDPTAGVMGNGYALWFASNGERGIRPAEPEMLKAFDLMRAATGQREEERNRTAQEIWKLAVDQQWGIGLVGLSPAFMGVRVVSERLENVPGRTGISQHIRTPWGAHPEQWYFK 673
BLAST of mRNA_P-wetherbeei_contig57447.1.1 vs. uniprot
Match: UPI001C2C076D (ABC transporter substrate-binding protein n=1 Tax=Siccirubricoccus sp. G192 TaxID=2849651 RepID=UPI001C2C076D) HSP 1 Score: 163 bits (413), Expect = 9.630e-45 Identity = 74/125 (59.20%), Postives = 92/125 (73.60%), Query Frame = 1
Query: 1 ESLFLYALPVLPVDPQSSFGGAAYAQWFASNGAIGIKPTDAALLKGFEMFRSATNKPAEMRNEVAKELWKLLVDEVWSIGLVGQSPAYMGTRVVNERLENVPARTCVSQHCRTPWSGHPEQWFYK 375
ESL+LY LPVDP + G AYA WFAS GA G KP + +L+ FE+ R+AT + E RN A+E+WKL V++ W IGLVG SPA+MG RVV+E+LENVPART +SQH RTPW HPEQW++K
Sbjct: 548 ESLYLYPRYTLPVDPTAGVMGNAYALWFASGGARGTKPEEPEMLRAFELMRAATGQREEERNRTAQEIWKLAVEQQWGIGLVGLSPAFMGVRVVSEKLENVPARTGISQHIRTPWGAHPEQWYFK 672
BLAST of mRNA_P-wetherbeei_contig57447.1.1 vs. uniprot
Match: UPI001BCECDAA (ABC transporter substrate-binding protein n=1 Tax=Roseococcus sp. XZZS9 TaxID=2835040 RepID=UPI001BCECDAA) HSP 1 Score: 162 bits (411), Expect = 1.880e-44 Identity = 73/125 (58.40%), Postives = 92/125 (73.60%), Query Frame = 1
Query: 1 ESLFLYALPVLPVDPQSSFGGAAYAQWFASNGAIGIKPTDAALLKGFEMFRSATNKPAEMRNEVAKELWKLLVDEVWSIGLVGQSPAYMGTRVVNERLENVPARTCVSQHCRTPWSGHPEQWFYK 375
ESL+LY LPVDP + Y+ W+ASNGA G PTD LL+ +E+ RSA+ + E RN+ AKE+WK+ VDE W IGLVG SPA+MG RVV+E+LENVPART +SQHCRTPW P+QW++K
Sbjct: 549 ESLYLYPRYTLPVDPIGAVISNVYSHWYASNGARGEAPTDPKLLRAYELMRSASGQRQEERNQTAKEVWKIAVDEQWGIGLVGLSPAFMGVRVVSEKLENVPARTGISQHCRTPWGARPDQWYFK 673
BLAST of mRNA_P-wetherbeei_contig57447.1.1 vs. uniprot
Match: A0A848EJW1_9PROT (ABC transporter substrate-binding protein n=4 Tax=Roseomonas TaxID=125216 RepID=A0A848EJW1_9PROT) HSP 1 Score: 162 bits (411), Expect = 1.910e-44 Identity = 74/125 (59.20%), Postives = 91/125 (72.80%), Query Frame = 1
Query: 1 ESLFLYALPVLPVDPQSSFGGAAYAQWFASNGAIGIKPTDAALLKGFEMFRSATNKPAEMRNEVAKELWKLLVDEVWSIGLVGQSPAYMGTRVVNERLENVPARTCVSQHCRTPWSGHPEQWFYK 375
ESL+LY LPVDP + G A+A WFASNG G PT+ +L+ F++ R+A + R + AKE+WKL V++ W IGLVG SPA+MG RVVNERLENVPART VSQH RTPW GHPEQW++K
Sbjct: 551 ESLYLYPRYALPVDPTAGVMGNAHALWFASNGERGTAPTEPEMLRAFQLMRAAAGQKLAERTQTAKEIWKLAVEQQWGIGLVGLSPAFMGVRVVNERLENVPARTGVSQHIRTPWGGHPEQWYFK 675
BLAST of mRNA_P-wetherbeei_contig57447.1.1 vs. uniprot
Match: UPI001BAC3138 (ABC transporter substrate-binding protein n=2 Tax=Roseomonas hellenica TaxID=2687306 RepID=UPI001BAC3138) HSP 1 Score: 162 bits (410), Expect = 2.580e-44 Identity = 72/125 (57.60%), Postives = 89/125 (71.20%), Query Frame = 1
Query: 1 ESLFLYALPVLPVDPQSSFGGAAYAQWFASNGAIGIKPTDAALLKGFEMFRSATNKPAEMRNEVAKELWKLLVDEVWSIGLVGQSPAYMGTRVVNERLENVPARTCVSQHCRTPWSGHPEQWFYK 375
ESL+LY VLPVDP YA W+ASNGA G P D +++ + + R+AT + RNE AKE+WK+ VD+ W IGLVG SPA+MG RVV+ERLENVP RT +SQHCRTPW HPEQW++K
Sbjct: 548 ESLYLYPRYVLPVDPIGGVMSNVYAAWYASNGARGSPPPDPEMMRAYTLMRAATGQQQAQRNETAKEVWKIAVDQQWGIGLVGLSPAFMGVRVVSERLENVPGRTGISQHCRTPWGAHPEQWYFK 672
BLAST of mRNA_P-wetherbeei_contig57447.1.1 vs. uniprot
Match: UPI00166824F2 (ABC transporter substrate-binding protein n=1 Tax=Roseomonas lacus TaxID=287609 RepID=UPI00166824F2) HSP 1 Score: 160 bits (406), Expect = 9.540e-44 Identity = 73/125 (58.40%), Postives = 88/125 (70.40%), Query Frame = 1
Query: 1 ESLFLYALPVLPVDPQSSFGGAAYAQWFASNGAIGIKPTDAALLKGFEMFRSATNKPAEMRNEVAKELWKLLVDEVWSIGLVGQSPAYMGTRVVNERLENVPARTCVSQHCRTPWSGHPEQWFYK 375
ESL+LY VLPVDP YA WFASNG G +P D + + F + R+AT + R+ AKE+WK+ VD+ W IGLVG SPA+MG RVVNERLENVP RT +SQHCRTPW GHPEQW++K
Sbjct: 549 ESLYLYPRYVLPVDPIGGVISNVYAAWFASNGERGSEPPDPEMRRAFALMRAATGQQKAERDATAKEVWKIAVDQQWGIGLVGLSPAFMGVRVVNERLENVPGRTGISQHCRTPWGGHPEQWYFK 673
BLAST of mRNA_P-wetherbeei_contig57447.1.1 vs. uniprot
Match: UPI000E768785 (ABC transporter substrate-binding protein n=2 Tax=Roseomonas vastitatis TaxID=2307076 RepID=UPI000E768785) HSP 1 Score: 160 bits (405), Expect = 1.300e-43 Identity = 70/124 (56.45%), Postives = 89/124 (71.77%), Query Frame = 1
Query: 1 ESLFLYALPVLPVDPQSSFGGAAYAQWFASNGAIGIKPTDAALLKGFEMFRSATNKPAEMRNEVAKELWKLLVDEVWSIGLVGQSPAYMGTRVVNERLENVPARTCVSQHCRTPWSGHPEQWFY 372
ESL+L+ LPVDP AYA W+ SNG G P + + + FE+ R+AT++ E RNE AKE+WKL+V++ W IGLVG SPA+MG RVVN L+NVPART +SQHCRTPW GHPEQW++
Sbjct: 548 ESLYLFPRYALPVDPLGGVISNAYAAWYGSNGERGQAPAEPEMRRAFELMRAATSQKQEQRNETAKEIWKLVVEQQWGIGLVGLSPAFMGVRVVNRTLQNVPARTAISQHCRTPWGGHPEQWYF 671
BLAST of mRNA_P-wetherbeei_contig57447.1.1 vs. uniprot
Match: A0A8J2UYF8_9PROT (Peptide ABC transporter substrate-binding protein n=1 Tax=Siccirubricoccus deserti TaxID=2013562 RepID=A0A8J2UYF8_9PROT) HSP 1 Score: 160 bits (404), Expect = 1.890e-43 Identity = 73/125 (58.40%), Postives = 90/125 (72.00%), Query Frame = 1
Query: 1 ESLFLYALPVLPVDPQSSFGGAAYAQWFASNGAIGIKPTDAALLKGFEMFRSATNKPAEMRNEVAKELWKLLVDEVWSIGLVGQSPAYMGTRVVNERLENVPARTCVSQHCRTPWSGHPEQWFYK 375
ESL+LY LPVDP + G AYA WFASNG G KP + +L+GFE+ R+A + R A+E+WKL V++ W IGLVG SPA+MG RVV+ERLENVPART +SQH RTPW HPEQW++K
Sbjct: 553 ESLYLYPRYTLPVDPTAGVMGNAYALWFASNGERGTKPVEPEMLRGFELMRAAAGQREAERVATAREIWKLAVEQQWGIGLVGLSPAFMGVRVVSERLENVPARTGISQHIRTPWGAHPEQWYFK 677
BLAST of mRNA_P-wetherbeei_contig57447.1.1 vs. uniprot
Match: A0A1E4LSN6_9PROT (SBP_bac_5 domain-containing protein n=1 Tax=Acetobacteraceae bacterium SCN 69-10 TaxID=1660159 RepID=A0A1E4LSN6_9PROT) HSP 1 Score: 143 bits (360), Expect = 7.870e-39 Identity = 65/125 (52.00%), Postives = 83/125 (66.40%), Query Frame = 1
Query: 1 ESLFLYALPVLPVDPQSSFGGAAYAQWFASNGAIGIKPTDAALLKGFEMFRSATNKPAEMRNEVAKELWKLLVDEVWSIGLVGQSPAYMGTRVVNERLENVPARTCVSQHCRTPWSGHPEQWFYK 375
E L+LY LPVD G YA+W+ASNGA+G KP D LL+ E R+A RN+ A+E+WK++VD+ + IG VGQSPA MG R+ + RL N+P R C++QHCRTP S HPE WFYK
Sbjct: 254 ELLYLYPSWALPVDVSQGAYGLDYAKWYASNGALGKKPEDPLLLEALEKLRAAAGMQEAERNKNAQEIWKIMVDQQFHIGTVGQSPALMGVRLASRRLANIPGRACIAQHCRTPGSSHPETWFYK 378 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57447.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57447.1.1 >prot_P-wetherbeei_contig57447.1.1 ID=prot_P-wetherbeei_contig57447.1.1|Name=mRNA_P-wetherbeei_contig57447.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=126bp ESLFLYALPVLPVDPQSSFGGAAYAQWFASNGAIGIKPTDAALLKGFEMFback to top mRNA from alignment at P-wetherbeei_contig57447:134..511- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57447.1.1 ID=mRNA_P-wetherbeei_contig57447.1.1|Name=mRNA_P-wetherbeei_contig57447.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig57447:134..511- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57447:134..511- >mRNA_P-wetherbeei_contig57447.1.1 ID=mRNA_P-wetherbeei_contig57447.1.1|Name=mRNA_P-wetherbeei_contig57447.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig57447:134..511- (Phaeothamnion wetherbeei SAG_119_79)back to top |