mRNA_P-wetherbeei_contig57435.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig57435.1.1
Unique NamemRNA_P-wetherbeei_contig57435.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig57435.1.1 vs. uniprot
Match: A0A371B3R1_9HYPH (Phosphate ABC transporter substrate-binding protein n=2 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A371B3R1_9HYPH)

HSP 1 Score: 188 bits (478), Expect = 1.400e-56
Identity = 92/164 (56.10%), Postives = 114/164 (69.51%), Query Frame = 1
Query:    7 PKSGPVTLQANIMEYVNSKALRAGEIKSDLVKIEFIGPKIANQGFKPLIREAKYHISELAVVSFLQAREAGKPLVLAPAPILSRFQHHCISYNTVRNPGMKPKDLEGKLVGLRSYSQTTALWVRAILKHEYGVDLGKITWTAYDPPHPAEVKDPSFVIPFDPGS 498
            P SGPVTL  N+ +Y  ++AL+AG + SD V+  F GPK+ANQGFKP++RE K+   ELA+V+FLQA+  GKPL L PA +++R QHH I YN  R   + PKD+EGK  G RSYS TT +WVR ILK EYGVDLGK+TW   D  H AE KDPS  +    GS
Sbjct:    4 PASGPVTLDTNLADYPVTRALKAGAVTSDRVRFNFTGPKVANQGFKPMVREGKFDAGELAIVTFLQAKIYGKPLTLLPAVVMARGQHHTIHYNVARG-ALTPKDIEGKRFGTRSYSVTTGVWVRGILKDEYGVDLGKVTWCTTDDGHLAEYKDPSNCVRLPAGS 166          
BLAST of mRNA_P-wetherbeei_contig57435.1.1 vs. uniprot
Match: A0A0Q7TVM4_9HYPH (Phosphate ABC transporter substrate-binding protein n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TVM4_9HYPH)

HSP 1 Score: 185 bits (469), Expect = 3.100e-55
Identity = 90/164 (54.88%), Postives = 116/164 (70.73%), Query Frame = 1
Query:    7 PKSGPVTLQANIMEYVNSKALRAGEIKSDLVKIEFIGPKIANQGFKPLIREAKYHISELAVVSFLQAREAGKPLVLAPAPILSRFQHHCISYNTVRNPGMKPKDLEGKLVGLRSYSQTTALWVRAILKHEYGVDLGKITWTAYDPPHPAEVKDPSFVIPFDPGS 498
            P +GPVTL  N+ +Y  ++AL++G +KS+LV  +F GPKIANQGFKP++RE K+   ELA+V+FLQA+  GKPL L PA +++R QHH I+YN  R P + PKD+EGK  G RSYS TT +WVR ILK EYGVD  K+TW   D  H AE +DP+ V     GS
Sbjct:    5 PAAGPVTLATNLADYPVTRALKSGAVKSELVNFDFCGPKIANQGFKPMVREGKFDAGELAIVTFLQAKVYGKPLTLLPAVVMARGQHHTINYNVARGP-LAPKDIEGKRFGSRSYSVTTGVWVRGILKDEYGVDSSKVTWCTTDDGHLAEYQDPANVERLPAGS 167          
BLAST of mRNA_P-wetherbeei_contig57435.1.1 vs. uniprot
Match: A0A495NZI8_PARPN (4,5-dihydroxyphthalate decarboxylase n=3 Tax=Paracoccus pantotrophus TaxID=82367 RepID=A0A495NZI8_PARPN)

HSP 1 Score: 182 bits (463), Expect = 2.930e-54
Identity = 89/167 (53.29%), Postives = 112/167 (67.07%), Query Frame = 1
Query:    7 PKSGPVTLQANIMEYVNSKALRAGEIKSDLVKIEFIGPKIANQGFKPLIREAKYHISELAVVSFLQAREAGKPLVLAPAPILSRFQHHCISYNTVRNPGMKPKDLEGKLVGLRSYSQTTALWVRAILKHEYGVDLGKITWTAYDPPHPAEVKDPSFVIPFDPGSKSV 507
            P++GPV+L ANI  Y  ++AL  G+I SDLV  EF G K A+ GFK ++R  ++ ISE+A+ +FLQA E GKP  L P  +L RFQHHCI YN  R+P M P DL GK VG+RSY+QTT LW+R IL++EYGVD   +TW  +D PH  E  DP  VI  DP    V
Sbjct:    9 PEAGPVSLAANITLYEPTRALINGDIASDLVSFEFAGLKNAHSGFKDMLRRNRFDISEMAIATFLQAHEFGKPFSLLPVVVLGRFQHHCIGYNIERHPNMTPADLPGKTVGVRSYTQTTGLWIRGILQNEYGVDPDSVTWLCFDQPHLEEYTDPPSVIRGDPAKDPV 175          
BLAST of mRNA_P-wetherbeei_contig57435.1.1 vs. uniprot
Match: A1B762_PARDP (Uncharacterized protein n=2 Tax=Paracoccus TaxID=265 RepID=A1B762_PARDP)

HSP 1 Score: 181 bits (459), Expect = 1.170e-53
Identity = 88/167 (52.69%), Postives = 112/167 (67.07%), Query Frame = 1
Query:    7 PKSGPVTLQANIMEYVNSKALRAGEIKSDLVKIEFIGPKIANQGFKPLIREAKYHISELAVVSFLQAREAGKPLVLAPAPILSRFQHHCISYNTVRNPGMKPKDLEGKLVGLRSYSQTTALWVRAILKHEYGVDLGKITWTAYDPPHPAEVKDPSFVIPFDPGSKSV 507
            P  GPVTL ANI  Y  ++AL  G++ SDL+ +EF G K A+ GFK ++R+ +Y ISE+A  +FLQA + GKP  L P  +L RFQHHCI +NT  +PGM P DL GK+VG+RSY+QTT LWVR IL++EYGVD   + W  +D PH  E  DP  VI  DP    V
Sbjct:    9 PAEGPVTLSANITLYEPTRALIEGKVASDLISLEFAGLKNAHAGFKDMLRKGRYDISEMATATFLQAHQFGKPFTLLPIVLLGRFQHHCIGFNTDVHPGMTPADLPGKVVGVRSYTQTTGLWVRGILQNEYGVDPDSVKWLCFDQPHLEEYADPPSVIWGDPAKDPV 175          
BLAST of mRNA_P-wetherbeei_contig57435.1.1 vs. uniprot
Match: UPI001E33E247 (phosphate ABC transporter substrate-binding protein n=1 Tax=Martelella mediterranea TaxID=293089 RepID=UPI001E33E247)

HSP 1 Score: 179 bits (455), Expect = 4.820e-53
Identity = 87/157 (55.41%), Postives = 108/157 (68.79%), Query Frame = 1
Query:    7 PKSGPVTLQANIMEYVNSKALRAGEIKSDLVKIEFIGPKIANQGFKPLIREAKYHISELAVVSFLQAREAGKPLVLAPAPILSRFQHHCISYNTVRNPGMKPKDLEGKLVGLRSYSQTTALWVRAILKHEYGVDLGKITWTAYDPPHPAEVKDPSFV 477
            P  GPVTL ANI E+  ++AL AGEI SDLV  +F G K A+ GFK ++R  KY ISE+A+ +FLQA E  KP  L P  +L RFQH CI YNT  +P + P DLEGK VG+RSY+QTT LWVR IL+++YGVD  K+ W  +D PH  E  DP+ V
Sbjct:    9 PADGPVTLSANITEFPTTRALMAGEIASDLVTFDFAGLKNAHAGFKDMLRRGKYDISEMAIATFLQAHEFDKPFSLLPLVVLGRFQHQCIGYNTDVHPELAPGDLEGKTVGVRSYTQTTGLWVRGILQNDYGVDPDKVNWLCFDQPHLEEYTDPASV 165          
BLAST of mRNA_P-wetherbeei_contig57435.1.1 vs. uniprot
Match: A0A1Y5RQR2_9RHOB (4,5-dihydroxyphthalate decarboxylase n=1 Tax=Aquimixticola soesokkakensis TaxID=1519096 RepID=A0A1Y5RQR2_9RHOB)

HSP 1 Score: 179 bits (454), Expect = 7.010e-53
Identity = 86/157 (54.78%), Postives = 109/157 (69.43%), Query Frame = 1
Query:    7 PKSGPVTLQANIMEYVNSKALRAGEIKSDLVKIEFIGPKIANQGFKPLIREAKYHISELAVVSFLQAREAGKPLVLAPAPILSRFQHHCISYNTVRNPGMKPKDLEGKLVGLRSYSQTTALWVRAILKHEYGVDLGKITWTAYDPPHPAEVKDPSFV 477
            P+SGP+TL ANI  Y  +KAL  G++ SDLV  +F G K A+ GFK ++R  K+ +SE+AV + LQAR  GKP  L PA +L RFQHHCI +NT  +P +KP DL GK V +RSY+QTT LWVR IL++EYGVD   +TW  +D PH AE  DP  V
Sbjct:   10 PESGPLTLAANITLYGGTKALMEGDVASDLVSFDFAGLKNAHAGFKDMLRRGKFDVSEMAVATLLQARAYGKPFSLLPAVVLGRFQHHCIGFNTDVHPDLKPADLAGKRVAVRSYTQTTGLWVRGILQNEYGVDPDSVTWVCFDQPHLAEYTDPPSV 166          
BLAST of mRNA_P-wetherbeei_contig57435.1.1 vs. uniprot
Match: UPI00191F2F96 (phosphate ABC transporter substrate-binding protein n=1 Tax=Microvirga zambiensis TaxID=1402137 RepID=UPI00191F2F96)

HSP 1 Score: 178 bits (452), Expect = 1.070e-52
Identity = 89/166 (53.61%), Postives = 112/166 (67.47%), Query Frame = 1
Query:   13 SGPVTLQANIMEYVNSKALRAGEIKSDLVKIEFIGPKIANQGFKPLIREAKYHISELAVVSFLQAREAGKPLVLAPAPILSRFQHHCISYNTVRNPGMKPKDLEGKLVGLRSYSQTTALWVRAILKHEYGVDLGKITWTAYDPPHPAEVKDPSFVIPFDPGSKSVE 510
            SG V L+ N+ +Y N+ AL+ G + S LV+ +F GPK A+ GFKP++RE  +   ELA+V+FLQA   GKP +L PAPI  R QHHCI YN+     + PKD+EGK VG+RSY+QTT LWVR IL+HEYGVDL K+TW   D  H AE +DPS       GSK  E
Sbjct:    6 SGKVKLRTNLADYPNTVALKTGALNSPLVEFDFCGPKTAHDGFKPMLRENAFDAGELAIVTFLQAFAYGKPYILLPAPISGRTQHHCIGYNSEFGD-LNPKDIEGKKVGVRSYAQTTGLWVRGILQHEYGVDLDKVTWLTLDESHLAEYEDPSNCQRLPKGSKLAE 170          
BLAST of mRNA_P-wetherbeei_contig57435.1.1 vs. uniprot
Match: A0A537KVB1_9PROT (Phosphate ABC transporter substrate-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537KVB1_9PROT)

HSP 1 Score: 177 bits (449), Expect = 3.360e-52
Identity = 85/170 (50.00%), Postives = 116/170 (68.24%), Query Frame = 1
Query:    1 ALPKSGPVTLQANIMEYVNSKALRAGEIKSDLVKIEFIGPKIANQGFKPLIREAKYHISELAVVSFLQAREAGKPLVLAPAPILSRFQHHCISYNTVRNPGMKPKDLEGKLVGLRSYSQTTALWVRAILKHEYGVDLGKITWTAYDPPHPAEVKDPSFVIPFDPGSKSVE 510
            A PKSGPVTL+ N+ +Y  ++AL++G I S+LV  +F GPK+ANQGFK ++RE  +   ELA+ +FL+AR  GKP+ + PA ++ RFQH     +T R P   P  +EGK +G+RSY+QTT +WVR I +HEYGVDL K+TW   D  H AE +DP  V    PG+K V+
Sbjct:    3 AYPKSGPVTLRTNLADYPMTRALKSGAITSELVTFDFCGPKVANQGFKQMVRERAFDAGELAIGTFLEARTYGKPIAMLPAVVMGRFQHGHTLRSTAR-PAFGPSAIEGKRIGIRSYTQTTGIWVRGIFQHEYGVDLNKVTWVCNDDGHLAEFRDPPNVERTPPGAKKVD 171          
BLAST of mRNA_P-wetherbeei_contig57435.1.1 vs. uniprot
Match: A0A443K5Q3_9RHOB (Uncharacterized protein n=1 Tax=Sinirhodobacter populi TaxID=2306993 RepID=A0A443K5Q3_9RHOB)

HSP 1 Score: 174 bits (440), Expect = 8.240e-51
Identity = 85/167 (50.90%), Postives = 109/167 (65.27%), Query Frame = 1
Query:    7 PKSGPVTLQANIMEYVNSKALRAGEIKSDLVKIEFIGPKIANQGFKPLIREAKYHISELAVVSFLQAREAGKPLVLAPAPILSRFQHHCISYNTVRNPGMKPKDLEGKLVGLRSYSQTTALWVRAILKHEYGVDLGKITWTAYDPPHPAEVKDPSFVIPFDPGSKSV 507
            P +GP+TL ANI  Y  ++AL  G + SDLV+  F G K A+ GFK ++R+ KY ISE+A+ + LQA E GKP  L P  +L RFQHHCI YNT  +P + P DL GK VG+RSY+QTT LWVR IL+++YG+D   + W  +D PH  E  DP  VI  DP    V
Sbjct:    8 PATGPMTLSANITLYEPTRALLEGAVTSDLVRFAFAGLKNAHAGFKDMLRKTKYDISEMAIATCLQAHEFGKPFSLLPVVVLGRFQHHCIGYNTAVHPHLAPADLAGKTVGVRSYTQTTGLWVRGILQNDYGLDPDTVKWLCFDKPHVEEYTDPPSVIWGDPAKDPV 174          
BLAST of mRNA_P-wetherbeei_contig57435.1.1 vs. uniprot
Match: B9BJK2_9BURK (Uncharacterized protein n=44 Tax=Burkholderiaceae TaxID=119060 RepID=B9BJK2_9BURK)

HSP 1 Score: 173 bits (439), Expect = 9.640e-51
Identity = 82/152 (53.95%), Postives = 108/152 (71.05%), Query Frame = 1
Query:   13 SGPVTLQANIMEYVNSKALRAGEIKSDLVKIEFIGPKIANQGFKPLIREAKYHISELAVVSFLQAREAGKPLVLAPAPILSRFQHHCISYNTVRNPGMKPKDLEGKLVGLRSYSQTTALWVRAILKHEYGVDLGKITWTAYDPPHPAEVKDP 468
            +G  TL+ N+ EY  +KA+R G +KSDLV ++F GP  A+ GFK ++RE+ +   ELA+V+FLQA+  GKP VL P PI  RFQHHC  YN +    + PKD+EGK VG+R+Y+QTTALW+R IL+HEYGVDL K+TW   +  H AE  DP
Sbjct:    6 TGVPTLRTNLSEYAVTKAMRDGRVKSDLVTLDFCGPTPAHNGFKAMVRESAFDAGELAIVTFLQAKAYGKPYVLLPTPISGRFQHHCAGYN-IDFGHLDPKDIEGKKVGVRTYTQTTALWIRGILRHEYGVDLDKVTWMTLNDGHLAEYNDP 156          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57435.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A371B3R1_9HYPH1.400e-5656.10Phosphate ABC transporter substrate-binding protei... [more]
A0A0Q7TVM4_9HYPH3.100e-5554.88Phosphate ABC transporter substrate-binding protei... [more]
A0A495NZI8_PARPN2.930e-5453.294,5-dihydroxyphthalate decarboxylase n=3 Tax=Parac... [more]
A1B762_PARDP1.170e-5352.69Uncharacterized protein n=2 Tax=Paracoccus TaxID=2... [more]
UPI001E33E2474.820e-5355.41phosphate ABC transporter substrate-binding protei... [more]
A0A1Y5RQR2_9RHOB7.010e-5354.784,5-dihydroxyphthalate decarboxylase n=1 Tax=Aquim... [more]
UPI00191F2F961.070e-5253.61phosphate ABC transporter substrate-binding protei... [more]
A0A537KVB1_9PROT3.360e-5250.00Phosphate ABC transporter substrate-binding protei... [more]
A0A443K5Q3_9RHOB8.240e-5150.90Uncharacterized protein n=1 Tax=Sinirhodobacter po... [more]
B9BJK2_9BURK9.640e-5153.95Uncharacterized protein n=44 Tax=Burkholderiaceae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57435contigP-wetherbeei_contig57435:1..510 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1101189.AQUO01000001_gene1543
Preferred nameMA20_26650
PFAMsNMT1
Model size510
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.77e-54
EggNOG OGsCOG0715@1|root,COG0715@2|Bacteria,1PKQN@1224|Proteobacteria,2TSRB@28211|Alphaproteobacteria,2PW8A@265|Paracoccus
Description4,5-dihydroxyphthalate decarboxylase
Cds size510
COG categoryP
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186851.9546962-CDS-P-wetherbeei_contig57435:0..5101683186851.9546962-CDS-P-wetherbeei_contig57435:0..510Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig57435 1..510 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57435.1.1prot_P-wetherbeei_contig57435.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig57435 1..510 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig57435.1.1

>prot_P-wetherbeei_contig57435.1.1 ID=prot_P-wetherbeei_contig57435.1.1|Name=mRNA_P-wetherbeei_contig57435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp
ALPKSGPVTLQANIMEYVNSKALRAGEIKSDLVKIEFIGPKIANQGFKPL
IREAKYHISELAVVSFLQAREAGKPLVLAPAPILSRFQHHCISYNTVRNP
GMKPKDLEGKLVGLRSYSQTTALWVRAILKHEYGVDLGKITWTAYDPPHP
AEVKDPSFVIPFDPGSKSVE
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mRNA from alignment at P-wetherbeei_contig57435:1..510+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig57435.1.1 ID=mRNA_P-wetherbeei_contig57435.1.1|Name=mRNA_P-wetherbeei_contig57435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig57435:1..510+ (Phaeothamnion wetherbeei SAG_119_79)
GCCCTACCCAAATCCGGTCCCGTGACGCTGCAGGCCAACATCATGGAGTA CGTGAACTCCAAGGCGTTGCGCGCGGGCGAGATCAAGTCCGACCTCGTCA AGATCGAATTCATCGGCCCCAAGATCGCCAACCAGGGTTTCAAGCCGCTG ATCCGCGAGGCCAAGTATCATATCTCCGAACTCGCCGTCGTGTCGTTCCT GCAGGCGCGCGAGGCGGGCAAGCCGCTCGTCCTTGCTCCCGCGCCGATCC TGTCGCGCTTCCAGCACCACTGCATTTCCTACAACACCGTGCGCAATCCC GGCATGAAGCCGAAAGACCTCGAAGGCAAGCTCGTCGGTCTTCGTTCCTA CTCGCAGACGACGGCGTTGTGGGTGCGCGCGATCCTGAAACACGAGTACG GCGTCGATCTCGGCAAGATCACATGGACCGCCTACGATCCCCCCCACCCC GCCGAGGTCAAGGACCCCTCGTTCGTGATCCCGTTCGATCCCGGCTCGAA GTCCGTCGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig57435:1..510+

>mRNA_P-wetherbeei_contig57435.1.1 ID=mRNA_P-wetherbeei_contig57435.1.1|Name=mRNA_P-wetherbeei_contig57435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig57435:1..510+ (Phaeothamnion wetherbeei SAG_119_79)
GCCCTACCCAAATCCGGTCCCGTGACGCTGCAGGCCAACATCATGGAGTA
CGTGAACTCCAAGGCGTTGCGCGCGGGCGAGATCAAGTCCGACCTCGTCA
AGATCGAATTCATCGGCCCCAAGATCGCCAACCAGGGTTTCAAGCCGCTG
ATCCGCGAGGCCAAGTATCATATCTCCGAACTCGCCGTCGTGTCGTTCCT
GCAGGCGCGCGAGGCGGGCAAGCCGCTCGTCCTTGCTCCCGCGCCGATCC
TGTCGCGCTTCCAGCACCACTGCATTTCCTACAACACCGTGCGCAATCCC
GGCATGAAGCCGAAAGACCTCGAAGGCAAGCTCGTCGGTCTTCGTTCCTA
CTCGCAGACGACGGCGTTGTGGGTGCGCGCGATCCTGAAACACGAGTACG
GCGTCGATCTCGGCAAGATCACATGGACCGCCTACGATCCCCCCCACCCC
GCCGAGGTCAAGGACCCCTCGTTCGTGATCCCGTTCGATCCCGGCTCGAA
GTCCGTCGAG
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