mRNA_P-wetherbeei_contig57427.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57427.1.1 vs. uniprot
Match: UPI0010BC35D3 (DUF5615 family PIN-like protein n=2 Tax=Bradyrhizobium ivorense TaxID=2511166 RepID=UPI0010BC35D3) HSP 1 Score: 58.9 bits (141), Expect = 7.780e-9 Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = 1
Query: 1 MHFLADEHIPASVIATLRNAGHDVTSASKTLQGLPDTVLVAVAARDHMVILTEDEDFTARV--REAAVASEPLPLALIHYRLDGMARVSKMSRMIDAVSEIG 300
M +L DE + A V+A+LR HDV ++ GL DT ++A+AAR+ ++LTED+DF V RE AV L+ R+ KM+R+ A+ G
Sbjct: 1 MRWLVDECVSAPVVASLRARQHDVLYVAEAAAGLSDTDVIALAARESRILLTEDKDFGDLVFRRERAVPG------LVLLRIAPERATLKMTRLALAIERYG 96
BLAST of mRNA_P-wetherbeei_contig57427.1.1 vs. uniprot
Match: E6VHS4_RHOPX (DUF5615 domain-containing protein n=2 Tax=Rhodopseudomonas palustris TaxID=1076 RepID=E6VHS4_RHOPX) HSP 1 Score: 58.5 bits (140), Expect = 1.120e-8 Identity = 36/100 (36.00%), Postives = 55/100 (55.00%), Query Frame = 1
Query: 1 MHFLADEHIPASVIATLRNAGHDVTSASKTLQGLPDTVLVAVAARDHMVILTEDEDFTARVREAAVASEPLPLALIHYRLDGMARVSKMSRMIDAVSEIG 300
M +LADE +PAS++A LR GHDV ++ GL D +V +AA D ++LTED+DF +A L L R+D + +R+ +A++ G
Sbjct: 1 MRWLADECVPASLVAALRADGHDVLYVAEMAAGLSDAEVVTMAASDGRLLLTEDKDFGELTVRFGLAVPGLVL----LRIDPANAKLQAARLKEAITRHG 96
BLAST of mRNA_P-wetherbeei_contig57427.1.1 vs. uniprot
Match: A0A522T8G6_9BACT (DUF5615 domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A522T8G6_9BACT) HSP 1 Score: 57.4 bits (137), Expect = 2.940e-8 Identity = 41/114 (35.96%), Postives = 58/114 (50.88%), Query Frame = 1
Query: 1 MHFLADEHIPASVIATLRNAGHDVTSASKTLQGLPDTVLVAVAARDHMVILTEDEDFTARVREAAVASEPLPLALIHYRLDGMARVSKMSRMIDAVSEIGNFETETVYSVEPTR 342
M FLADE PA +I LR AG DVT+ S+ G D ++A AA + V+LTED DF V +E + LI + +R+S + ++AV +G +EP R
Sbjct: 1 MRFLADESCPAPLIFALRAAGQDVTAVSEFSPGASDEQVLAHAADEKRVLLTEDRDFGEIVFSRRQPNEGV--VLIRFPAGARSRLSAV--FLEAVVRLGEQLRGAFTVIEPGR 110
BLAST of mRNA_P-wetherbeei_contig57427.1.1 vs. uniprot
Match: UPI001FED4A2E (DUF5615 family PIN-like protein n=1 Tax=Rhodopseudomonas sp. WA056 TaxID=2269367 RepID=UPI001FED4A2E) HSP 1 Score: 55.8 bits (133), Expect = 1.110e-7 Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 1 MHFLADEHIPASVIATLRNAGHDVTSASKTLQGLPDTVLVAVAARDHMVILTEDEDFTAR 180
M +LADE +PAS++A LR GHDV ++ GL D +V +AA D ++LTED F R
Sbjct: 1 MRWLADECVPASLVAALRADGHDVLYVAEMAAGLSDAEVVTMAASDGRLLLTEDNGFGVR 60
BLAST of mRNA_P-wetherbeei_contig57427.1.1 vs. uniprot
Match: A0A1F3B881_9BACT (DUF5615 domain-containing protein n=1 Tax=Armatimonadetes bacterium RBG_16_58_9 TaxID=1797287 RepID=A0A1F3B881_9BACT) HSP 1 Score: 55.8 bits (133), Expect = 1.310e-7 Identity = 32/90 (35.56%), Postives = 50/90 (55.56%), Query Frame = 1
Query: 1 MHFLADEHIPASVIATLRNAGHDVTSASKTLQGLPDTVLVAVAARDHMVILTEDEDFTARVREAAVASEPLPLALIHYRLDGMARVSKMS 270
M FL DE + +V A LR GHDV S + +G D ++A AA+D +++T+D+DF +V V L +I RL + V+K++
Sbjct: 1 MRFLVDECVGPAVAAWLRGQGHDVYSVYEQARGTDDEAVIATAAKDSRILITDDKDFGEKVYRDQV----LHAGVILLRLTDQSPVAKVA 86
BLAST of mRNA_P-wetherbeei_contig57427.1.1 vs. uniprot
Match: A0A534CPJ1_9GAMM (DUF5615 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534CPJ1_9GAMM) HSP 1 Score: 54.3 bits (129), Expect = 4.650e-7 Identity = 29/87 (33.33%), Postives = 51/87 (58.62%), Query Frame = 1
Query: 1 MHFLADEHIPASVIATLRNAGHDVTSASKTLQGLPDTVLVAVAARDHMVILTEDEDFTARVREAAVASEPLPLALIHYRLDGMARVS 261
M +ADE +++ LR AGHDV + ++T+ G D ++A+AA + ++LTED+DF V AA + + L+ Y + +R++
Sbjct: 1 MRLVADESCDFTLVVGLRAAGHDVVAITETMSGADDEQVMALAAAERRLLLTEDKDFGQLVFAAAARNSGV--VLVRYPVRARSRLT 85
BLAST of mRNA_P-wetherbeei_contig57427.1.1 vs. uniprot
Match: UPI001CD3B918 (DUF5615 family PIN-like protein n=2 Tax=Bradyrhizobium sp. BRP22 TaxID=2793821 RepID=UPI001CD3B918) HSP 1 Score: 54.3 bits (129), Expect = 4.850e-7 Identity = 37/116 (31.90%), Postives = 57/116 (49.14%), Query Frame = 1
Query: 1 MHFLADEHIPASVIATLRNAGHDVTSASKTLQGLPDTVLVAVAARDHMVILTEDEDFTARV--REAAVASEPLPLALIHYRLDGMARVSKMSRMIDAVSEIGNFETETVYSVEPTR 342
M +L DE + A ++A+LR GHDV ++ GL D +VA AAR+ ++LTED+DF + RE + L+ R+ K+ R+ A+ G E +E R
Sbjct: 1 MRWLVDECVGAPLVASLRLLGHDVLYIAEAAAGLSDADVVAFAAREKRILLTEDKDFGELIFRRERTIPG------LVLIRIGSENTSLKIERLGTAIERYGEQLFERYLVIEEGR 110
BLAST of mRNA_P-wetherbeei_contig57427.1.1 vs. uniprot
Match: A0A0D7QAU7_9BRAD (DUF5615 domain-containing protein n=2 Tax=Bradyrhizobium sp. LTSPM299 TaxID=1619233 RepID=A0A0D7QAU7_9BRAD) HSP 1 Score: 53.5 bits (127), Expect = 8.660e-7 Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 1
Query: 16 DEHIPASVIATLRNAGHDVTSASKTLQGLPDTVLVAVAARDHMVILTEDEDFTARV--REAAV 198
DE + A ++A+LR GHDV ++T GL D ++A+AAR+ ++LTED+DF V RE AV
Sbjct: 2 DECVGAPLVASLRAVGHDVLYVAETAAGLNDVDVIALAAREKRILLTEDKDFGDLVFRRERAV 64
BLAST of mRNA_P-wetherbeei_contig57427.1.1 vs. uniprot
Match: UPI0015760BA9 (DUF5615 family PIN-like protein n=1 Tax=Sphingomonas bacterium TaxID=1895847 RepID=UPI0015760BA9) HSP 1 Score: 52.0 bits (123), Expect = 3.980e-6 Identity = 29/96 (30.21%), Postives = 48/96 (50.00%), Query Frame = 1
Query: 1 MHFLADEHIPASVIATLRNAGHDVTSASKTLQGLPDTVLVAVAARDHMVILTEDEDFTARVREAAVASEPLPLALIHYRLDGMARVSKMSRMIDAV 288
M FL D H+ ++ L + HDV A+ D L+A+A R+H VI+T+D DF+ V P PL ++ R ++ + R+++ V
Sbjct: 1 MKFLIDVHVSRTLARALADRDHDVVEAALNYPMSADEELLAIAIREHRVIVTQDSDFSDLV---FAFDAPAPLGIVFIRCRPRDQIDLVGRVLEIV 93
BLAST of mRNA_P-wetherbeei_contig57427.1.1 vs. uniprot
Match: A0A6V8Q6G7_9ACTN (DUF5615 domain-containing protein n=3 Tax=Candidatus Hakubanella thermoalkaliphilus TaxID=2754717 RepID=A0A6V8Q6G7_9ACTN) HSP 1 Score: 50.8 bits (120), Expect = 3.510e-5 Identity = 36/112 (32.14%), Postives = 55/112 (49.11%), Query Frame = 1
Query: 1 MHFLADEHIPASVIATLRNAGHDVTSASKTLQGLPDTVLVAVAARDHMVILTEDEDFTARVREAAVASEPLPLALIHYRLDGMARVSKMSRMIDAVSEIGNFETETVYSVEP 336
+ FLADE +V+ LR AG+DV + S+ D+ L+A AA++ ++LTED+DF V + S +I R G AR + + V E G + V+P
Sbjct: 82 VRFLADESCDFAVVRALRTAGYDVLAVSEVTCRSDDSELIAQAAQEQRILLTEDKDFGWLVFVSRADSP----GVILIRFPGNARKAPAQTVRQLVQENGEALSGCFTVVQP 189 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57427.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57427.1.1 >prot_P-wetherbeei_contig57427.1.1 ID=prot_P-wetherbeei_contig57427.1.1|Name=mRNA_P-wetherbeei_contig57427.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=114bp MHFLADEHIPASVIATLRNAGHDVTSASKTLQGLPDTVLVAVAARDHMVIback to top mRNA from alignment at P-wetherbeei_contig57427:169..510+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57427.1.1 ID=mRNA_P-wetherbeei_contig57427.1.1|Name=mRNA_P-wetherbeei_contig57427.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=342bp|location=Sequence derived from alignment at P-wetherbeei_contig57427:169..510+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57427:169..510+ >mRNA_P-wetherbeei_contig57427.1.1 ID=mRNA_P-wetherbeei_contig57427.1.1|Name=mRNA_P-wetherbeei_contig57427.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=342bp|location=Sequence derived from alignment at P-wetherbeei_contig57427:169..510+ (Phaeothamnion wetherbeei SAG_119_79)back to top |