mRNA_P-wetherbeei_contig574.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig574.1.1
Unique NamemRNA_P-wetherbeei_contig574.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig574.1.1 vs. uniprot
Match: A0A836CH70_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH70_9STRA)

HSP 1 Score: 980 bits (2533), Expect = 0.000e+0
Identity = 502/573 (87.61%), Postives = 545/573 (95.11%), Query Frame = 1 
Query:   25 SDARFFTTTKKGETHELKLELQSPNRDKKKDAVKKVIANMTVGKQMDMLFTDVINCIQTDSIELKKLVYLYLINYAKSQPELTLLAVNTFVKDAKDHNPLVRALAVRTMGCIRVEKITEYLCEPLRRALRDDDPYVRKTAAVCVAKLYDISPTLVEDQGFLQVLRDLICDPNPTVVANSVAALSEISETGGRDVMQITTSVLQKLLAALNECTEWGQVFILDSLARYTPADAREAGSIIERVTPRLQHANSAVVMSAVKVILTYMDDITDMDTVRTFSKKLAPPLVTLLNSEPEIQYVALRNINLVVQKRPKILEHEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQVLLELKEYATEVDVEFVRKAVRAIGRCAVKLENAAERCINVLLELIETKVDYVLQEAVVVIKDIFRRYPNRYESIIATLCENLETLDEPEAKASIIWILGEYAERIDNADEQLEQFLETFEEESAEVQLQLLTATVKLFLKQPEDTQELVQKVLQMATEDSDNPDLRDRGFVYWRLLSTNPEAAKAVVLSEKPTIADDTSALEPALLDLLIRQIATLASIYHK 1743
            SD+RFFTTTKKGETHEL+LELQSPNRDKKKDAVKKVIANMTVGK + MLFTDVINCIQT++IELKKLVYLYLINYAK+QPELTLLAVNTFVKDAKD NPL+RALAVRTMGCIRVEKITEYLCEPLRRALRDDDPYVRKTAAVCVAKLYDI+  LVEDQGFLQVLRDL+CDPNPTVVAN+VAALSEI++TGG+DVMQITT+ LQKLLAALNECTEWGQVFILDSLA+Y P D  EA  IIERVTPRLQHANSAVVMSAVKVIL+Y+D IT+ DT R FS+KLAPPLVTLLNSEPEIQYVALRNINL+VQKRPKILEHEIKVFFCKYNDPIYVKMEKLE IIRLV+DRNI+QVLLELKEYA EVDVEFVR++VRAIGRCA+KLE AA+RCI+VLLELIETKV+YVLQEAV+VIKDIFRRYPN+YES+I  LCENLETLDEPEAKA+IIWI+GEYAERIDNADEQL+ FLETFE+ESA+VQLQLLTATVKLFLKQP+ TQ++VQ+VL MATEDSDNPDLRDRGFVYWRLL+TNPEAAKAVVL EKPTIADDT  LEPALLDLL+ QIATLAS+YHK
Sbjct:   12 SDSRFFTTTKKGETHELRLELQSPNRDKKKDAVKKVIANMTVGKDVSMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDAKDPNPLIRALAVRTMGCIRVEKITEYLCEPLRRALRDDDPYVRKTAAVCVAKLYDINAGLVEDQGFLQVLRDLVCDPNPTVVANAVAALSEITDTGGKDVMQITTATLQKLLAALNECTEWGQVFILDSLAKYDPVDGVEAEGIIERVTPRLQHANSAVVMSAVKVILSYLDLITNKDTERVFSRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPKILEHEIKVFFCKYNDPIYVKMEKLEIIIRLVSDRNIEQVLLELKEYAQEVDVEFVRRSVRAIGRCAIKLERAADRCISVLLELIETKVNYVLQEAVIVIKDIFRRYPNKYESVIGKLCENLETLDEPEAKAAIIWIIGEYAERIDNADEQLDHFLETFEDESADVQLQLLTATVKLFLKQPDTTQDMVQRVLHMATEDSDNPDLRDRGFVYWRLLATNPEAAKAVVLGEKPTIADDTFTLEPALLDLLVGQIATLASVYHK 584
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BLAST of mRNA_P-wetherbeei_contig574.1.1 vs. uniprot
Match: A0A6H5J742_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J742_9PHAE)

HSP 1 Score: 909 bits (2348), Expect = 0.000e+0
Identity = 469/538 (87.17%), Postives = 507/538 (94.24%), Query Frame = 1 
Query:  142 MTVGKQMDMLFTDVINCIQTDSIELKKLVYLYLINYAKSQPELTLLAVNTFVKDAKDHNPLVRALAVRTMGCIRVEKITEYLCEPLRRALRDDDPYVRKTAAVCVAKLYDISPTLVEDQGFLQVLRDLICDPNPTVVANSVAALSEISETGGRDVMQITTSVLQKLLAALNECTEWGQVFILDSLARYTPADAREAGSIIERVTPRLQHANSAVVMSAVKVILTYMDDITDMDTVRTFSKKLAPPLVTLLNSEPEIQYVALRNINLVVQKRPKILEHEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQVLLELKEYATEVDVEFVRKAVRAIGRCAVKLENAAERCINVLLELIETKVDYVLQEAVVVIKDIFRRYPNRYESIIATLCENLETLDEPEAKASIIWILGEYAERIDNADEQLEQFLETFEEESAEVQLQLLTATVKLFLKQPEDTQELVQKVLQMATEDSDNPDLRDRGFVYWRLLSTNPEAAKAVVLSEKPTIADDTSALEPALLDLLIRQ----IATLASIYHK 1743
            MTVGK + MLFTDVINCIQT++IELKKLVYLYLINYAK+QPELTLLAVNTFVKDA D NPL+RALAVRTMGCIRVEKITEYLCEPLR+ALRDDDPYVRKTAAVCVAKLYDI+  LVEDQGFLQ+LRDLICDPNPTVVAN+VAALSEI +T GRDVM+I TSVLQKLLAALNECTEWGQVFILDSLA+YTPAD REA  IIERVTPRLQHANSAVVMSAVKV+LTY+D +  +DT R+FS+KLAPPLVTLLNSEPE QYVALRNINL+VQKRP ILE EIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQVLLELKEYA EVDVEFVRKAVRAIGRCA+KLE AAERCINVLLELI+TKV+YVLQEAV+VIKDIFR+YPNRYESII+ LCENL+TLDEPEAKASIIWI+GEYAERIDNADEQLE FLETFEEESAEVQLQLLTATVKLFLKQPEDTQ++VQ+VLQ+ATE+SD+PDLRDRGFVYWRLLSTNPEAAKAVVLSEKP IADDT  LEPA+LD+LI Q    I+TL+SIY+K
Sbjct:    1 MTVGKDVAMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDDDPYVRKTAAVCVAKLYDINADLVEDQGFLQILRDLICDPNPTVVANAVAALSEIGDTSGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSVNSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQVLLELKEYAQEVDVEFVRKAVRAIGRCAIKLERAAERCINVLLELIQTKVNYVLQEAVIVIKDIFRKYPNRYESIISALCENLDTLDEPEAKASIIWIIGEYAERIDNADEQLEHFLETFEEESAEVQLQLLTATVKLFLKQPEDTQDMVQRVLQLATEESDDPDLRDRGFVYWRLLSTNPEAAKAVVLSEKPNIADDTFTLEPAVLDMLIGQVGGRISTLSSIYYK 538
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BLAST of mRNA_P-wetherbeei_contig574.1.1 vs. uniprot
Match: A0A7S1FVF1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FVF1_9STRA)

HSP 1 Score: 906 bits (2341), Expect = 0.000e+0
Identity = 462/572 (80.77%), Postives = 525/572 (91.78%), Query Frame = 1 
Query:   28 DARFFTTTKKGETHELKLELQSPNRDKKKDAVKKVIANMTVGKQMDMLFTDVINCIQTDSIELKKLVYLYLINYAKSQPELTLLAVNTFVKDAKDHNPLVRALAVRTMGCIRVEKITEYLCEPLRRALRDDDPYVRKTAAVCVAKLYDISPTLVEDQGFLQVLRDLICDPNPTVVANSVAALSEISETGGRDVMQITTSVLQKLLAALNECTEWGQVFILDSLARYTPADAREAGSIIERVTPRLQHANSAVVMSAVKVILTYMDDITDMDTVRTFSKKLAPPLVTLLNSEPEIQYVALRNINLVVQKRPKILEHEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQVLLELKEYATEVDVEFVRKAVRAIGRCAVKLENAAERCINVLLELIETKVDYVLQEAVVVIKDIFRRYPNRYESIIATLCENLETLDEPEAKASIIWILGEYAERIDNADEQLEQFLETFEEESAEVQLQLLTATVKLFLKQPEDTQELVQKVLQMATEDSDNPDLRDRGFVYWRLLSTNPEAAKAVVLSEKPTIADDTSALEPALLDLLIRQIATLASIYHK 1743
            D+R+FTTTKKGE HEL+LELQS +R  K DAVKKVIA+MTVGK + MLFTDV+NC+QT +IELKKLVYLYLINYAKSQPELTLLAVNTFVKDA D NPL+RALAVRTMGCIRV++ITEYLCEPL RALRD+DPYVRKTAAVCVAKLYD++P LVE++GFL+ L DLI D NP+VVANSVAALSE++ET GRDVM++++SVLQKLLAALNECTEWGQVFILDSLA+Y P D +EA  IIERVTPRLQHANSAVVMSAVKVIL+YM+ + + DT+R  ++KLAPPLVTLLNSE EIQYVALRNINL+VQKRP ILE+EIKVFFCKYNDPIYVKMEKLE II+LV++RNIDQVLLELKEY+TEVDV+FVRK+V AIGRCAVKLE AAERCI+VLLELI+TKV+YV+QE+V+VIKDIFRRYPNRYESIIATLCENLETLDEPEAKAS+IWI+GEYAERIDNADE L+ FLE FEEE A VQLQLLTATVK FLK PEDTQ++VQ+VL MATE+SDNPDLRDRGF+YWRLLST+PEAAK VVLSEKP I D+   L+P+LLD+LI QIATL+S+YHK
Sbjct:    1 DSRYFTTTKKGEMHELQLELQSNDRTTKVDAVKKVIASMTVGKDVSMLFTDVLNCVQTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDEDPYVRKTAAVCVAKLYDVAPNLVEERGFLETLHDLISDSNPSVVANSVAALSEVAETSGRDVMRVSSSVLQKLLAALNECTEWGQVFILDSLAKYAPRDGQEAEGIIERVTPRLQHANSAVVMSAVKVILSYMELVANQDTIRNLTRKLAPPLVTLLNSEAEIQYVALRNINLIVQKRPHILENEIKVFFCKYNDPIYVKMEKLEIIIKLVSERNIDQVLLELKEYSTEVDVDFVRKSVSAIGRCAVKLERAAERCISVLLELIQTKVNYVVQESVIVIKDIFRRYPNRYESIIATLCENLETLDEPEAKASMIWIIGEYAERIDNADELLDTFLENFEEEDASVQLQLLTATVKCFLKNPEDTQDMVQRVLDMATEESDNPDLRDRGFIYWRLLSTDPEAAKTVVLSEKPVIEDEIYKLDPSLLDILISQIATLSSMYHK 572
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BLAST of mRNA_P-wetherbeei_contig574.1.1 vs. uniprot
Match: A0A7S2WFD7_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFD7_9STRA)

HSP 1 Score: 903 bits (2334), Expect = 0.000e+0
Identity = 456/572 (79.72%), Postives = 523/572 (91.43%), Query Frame = 1 
Query:   28 DARFFTTTKKGETHELKLELQSPNRDKKKDAVKKVIANMTVGKQMDMLFTDVINCIQTDSIELKKLVYLYLINYAKSQPELTLLAVNTFVKDAKDHNPLVRALAVRTMGCIRVEKITEYLCEPLRRALRDDDPYVRKTAAVCVAKLYDISPTLVEDQGFLQVLRDLICDPNPTVVANSVAALSEISETGGRDVMQITTSVLQKLLAALNECTEWGQVFILDSLARYTPADAREAGSIIERVTPRLQHANSAVVMSAVKVILTYMDDITDMDTVRTFSKKLAPPLVTLLNSEPEIQYVALRNINLVVQKRPKILEHEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQVLLELKEYATEVDVEFVRKAVRAIGRCAVKLENAAERCINVLLELIETKVDYVLQEAVVVIKDIFRRYPNRYESIIATLCENLETLDEPEAKASIIWILGEYAERIDNADEQLEQFLETFEEESAEVQLQLLTATVKLFLKQPEDTQELVQKVLQMATEDSDNPDLRDRGFVYWRLLSTNPEAAKAVVLSEKPTIADDTSALEPALLDLLIRQIATLASIYHK 1743
            D RFFTTTKKGE HEL++E+ SPNR+KK DAVKKVIANMTVGK +  LFTDV+NCIQT++IELKKLVYLYLINYAK+QPE  LLAVNTFVKDA D NPL+RALAVRTMGCIRVE+ITEYLCEPL+R L DDDPYVRKTAA+CVAKL+DI+P +VE++GFL++LRD + D NPTVVAN++AAL+EI E  GRDVM +TTSVLQKLLAALNECTEWGQVFILD+LA+YTPA+ +EA  IIERVTPRLQHANSAVVMSAVK++L+YMD IT  DTVR  S+KLAPPLVTLLNSE EIQ+VALRNINL+VQKRP+ILEHEIKVFFCKYNDPIYVKMEKLE IIRLVN+RNI+QVLLE KEYATEVDV+FVR++VRAIGRCA+KLE AA+RCINVLLELI+ KVDY++QEAV+V KDIFRRYP +YE II+TLCENLETLDEPEAKAS+IWI+GEYA++IDNA+E L+ FLE FEEE ++VQLQLLTATVKLFLKQP ++QE+VQ+VLQ+ATE+SDNPDLRDRG+VYWRLLS+NPEAAKAVVL+EKP IADDT ALEP LL  LI  I+TLASIYHK
Sbjct:   15 DGRFFTTTKKGEVHELRMEINSPNREKKMDAVKKVIANMTVGKDVSSLFTDVVNCIQTNNIELKKLVYLYLINYAKTQPETALLAVNTFVKDANDPNPLIRALAVRTMGCIRVERITEYLCEPLQRCLSDDDPYVRKTAAICVAKLHDIAPDMVEERGFLEMLRDRVGDSNPTVVANAIAALNEIQEASGRDVMMMTTSVLQKLLAALNECTEWGQVFILDALAKYTPANGQEAEGIIERVTPRLQHANSAVVMSAVKIVLSYMDLITSEDTVRQLSRKLAPPLVTLLNSEAEIQFVALRNINLIVQKRPQILEHEIKVFFCKYNDPIYVKMEKLEIIIRLVNERNIEQVLLEFKEYATEVDVDFVRRSVRAIGRCAIKLERAAQRCINVLLELIQLKVDYIVQEAVIVTKDIFRRYPGKYEQIISTLCENLETLDEPEAKASMIWIVGEYADQIDNAEELLDSFLEAFEEEPSQVQLQLLTATVKLFLKQPAESQEMVQRVLQLATEESDNPDLRDRGYVYWRLLSSNPEAAKAVVLAEKPNIADDTFALEPELLQALIGDISTLASIYHK 586
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BLAST of mRNA_P-wetherbeei_contig574.1.1 vs. uniprot
Match: A0A7S3PZD9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZD9_9STRA)

HSP 1 Score: 897 bits (2317), Expect = 0.000e+0
Identity = 461/574 (80.31%), Postives = 525/574 (91.46%), Query Frame = 1 
Query:   28 DARFFTTTKKGETHELKLELQSPNRDKKKDAVKKVIANMTVGKQMDMLFTDVINCIQTDSIELKKLVYLYLINYAKSQPELTLLAVNTFVKDAKDHNPLVRALAVRTMGCIRVEKITEYLCEPLRRALRDDDPYVRKTAAVCVAKLYDISPTLVEDQGFLQVLRDLICDPNPTVVANSVAALSEISETGGRDVMQITTSVLQKLLAALNECTEWGQVFILDSLARYTPADAREAGSIIERVTPRLQHANSAVVMSAVKVILTYMDDI--TDMDTVRTFSKKLAPPLVTLLNSEPEIQYVALRNINLVVQKRPKILEHEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQVLLELKEYATEVDVEFVRKAVRAIGRCAVKLENAAERCINVLLELIETKVDYVLQEAVVVIKDIFRRYPNRYESIIATLCENLETLDEPEAKASIIWILGEYAERIDNADEQLEQFLETFEEESAEVQLQLLTATVKLFLKQPEDTQELVQKVLQMATEDSDNPDLRDRGFVYWRLLSTNPEAAKAVVLSEKPTIADDTSALEPALLDLLIRQIATLASIYHK 1743
            D+RFFTT KKGE HEL++EL S +R+ K DAVKKVIA+MTVGK + MLFTDV+NC+QT +IELKKLVYLYLINYAKSQPELTLLAVNTFVKDA D NPL+RALAVRTMGCIRV++ITEYLC+PL RALRD+DPYVRKTAAVCVAKLYDI+P LV+++GFL++L DLI D NP+VVAN VAALSEI+ET G+DVM+I+TSVLQKLLAALNECTEWGQVFILDSLA+YTPADAREA  IIERVTPRLQHANSAVVMSAVKVIL+YM+ +  ++ DT+R  ++KLAPPLVTLLNSEPEIQYVALRNINL+VQKRP ILE+EIKVFFCKYNDPIYVKMEKLE II+LV+++NIDQVLLELKEYATEVDV+FVRK+V AIGRCAVKLE AAERCI VLLELI+TKV+YV+QE+V+VIKDIFRRYPNRYESIIATLC+NL+TLDEP AKAS+IWI+GEYAERIDNADE L+ FLETFEEE   VQLQLLTATVK FLK PE+TQ++VQ+VL +ATE+SDNPDLRDRGF+YWRLLST+PEAAK VVL +KP I DDT  LEP LL+ LI QIATL+SIYHK
Sbjct:   16 DSRFFTTQKKGEMHELRMELHSTDRNTKVDAVKKVIASMTVGKDVSMLFTDVLNCVQTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDASDPNPLIRALAVRTMGCIRVDRITEYLCDPLSRALRDEDPYVRKTAAVCVAKLYDIAPALVQERGFLEILHDLISDSNPSVVANGVAALSEIAETSGKDVMKISTSVLQKLLAALNECTEWGQVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGNSNSDTIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPTILENEIKVFFCKYNDPIYVKMEKLEIIIKLVSEKNIDQVLLELKEYATEVDVDFVRKSVSAIGRCAVKLERAAERCIGVLLELIQTKVNYVVQESVIVIKDIFRRYPNRYESIIATLCDNLDTLDEPLAKASMIWIIGEYAERIDNADELLDNFLETFEEEDPAVQLQLLTATVKCFLKNPEETQDMVQRVLDLATEESDNPDLRDRGFIYWRLLSTDPEAAKLVVLGDKPVIEDDTFKLEPNLLNTLIGQIATLSSIYHK 589
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BLAST of mRNA_P-wetherbeei_contig574.1.1 vs. uniprot
Match: A0A7S1VQ66_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VQ66_9STRA)

HSP 1 Score: 896 bits (2316), Expect = 0.000e+0
Identity = 462/573 (80.63%), Postives = 515/573 (89.88%), Query Frame = 1 
Query:   25 SDARFFTTTKKGETHELKLELQSPNRDKKKDAVKKVIANMTVGKQMDMLFTDVINCIQTDSIELKKLVYLYLINYAKSQPELTLLAVNTFVKDAKDHNPLVRALAVRTMGCIRVEKITEYLCEPLRRALRDDDPYVRKTAAVCVAKLYDISPTLVEDQGFLQVLRDLICDPNPTVVANSVAALSEISETGGRDVMQITTSVLQKLLAALNECTEWGQVFILDSLARYTPADAREAGSIIERVTPRLQHANSAVVMSAVKVILTYMDDITDMDTVRTFSKKLAPPLVTLLNSEPEIQYVALRNINLVVQKRPKILEHEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQVLLELKEYATEVDVEFVRKAVRAIGRCAVKLENAAERCINVLLELIETKVDYVLQEAVVVIKDIFRRYPNRYESIIATLCENLETLDEPEAKASIIWILGEYAERIDNADEQLEQFLETFEEESAEVQLQLLTATVKLFLKQPEDTQELVQKVLQMATEDSDNPDLRDRGFVYWRLLSTNPEAAKAVVLSEKPTIADDTSALEPALLDLLIRQIATLASIYHK 1743
            SD+RFFTT  KGE HEL+LEL S +R  K DAVKKVIA+MTVGK + MLFTDV+NC+QT +IELKKLVYLYLINYAKSQPELTLLAVNTFVKDA D NPL+RALAVRTMGCIRV++ITEYLCEPL RALRD+DPYVRKTAAVCVAKLYDI+P LV+++GFL VL DLI D NP+VVAN VAALSEISET GRDVM+I+  VLQKLLAALNECTEWGQVFILDSLA+YTPAD REA  IIERVTPRLQHAN+AVVMSAVKVIL YMD + + D +R  ++KLAPPLVTLLNSEPEIQYVALRNINL+VQKRP ILE+EIKVFFCKYNDPIYVKMEKLE II+L  ++NIDQVLLELKEYATEVDV+FVRKAV +IGRCAVKLE AAERCI VLLELI+TKV+YV+QE+V+VIKDIFRRYPNRYESIIATLC+NL+TLDEP AKAS+IWI+GEYAERIDNADE L+ FLETFEEE   VQLQLLTATVK FLK PEDTQ++VQ+VL MATE+SDNPDLRDRGF+YWRLLST+PEAAK VVL +KP I DDT  LEP LL+ LI QIATL+S+YHK
Sbjct:   13 SDSRFFTTQTKGEMHELRLELHSTDRTTKVDAVKKVIASMTVGKDVSMLFTDVLNCVQTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDASDPNPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDEDPYVRKTAAVCVAKLYDIAPDLVQERGFLDVLHDLISDSNPSVVANGVAALSEISETSGRDVMKISAGVLQKLLAALNECTEWGQVFILDSLAKYTPADGREAEGIIERVTPRLQHANAAVVMSAVKVILNYMDALQNSDAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILENEIKVFFCKYNDPIYVKMEKLEIIIKLCAEKNIDQVLLELKEYATEVDVDFVRKAVSSIGRCAVKLERAAERCIGVLLELIQTKVNYVVQESVIVIKDIFRRYPNRYESIIATLCDNLDTLDEPLAKASMIWIIGEYAERIDNADELLDTFLETFEEEDPAVQLQLLTATVKCFLKAPEDTQDMVQRVLNMATEESDNPDLRDRGFIYWRLLSTDPEAAKMVVLGDKPVIEDDTFRLEPPLLNTLIGQIATLSSVYHK 585
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BLAST of mRNA_P-wetherbeei_contig574.1.1 vs. uniprot
Match: A0A6U3VDL9_9STRA (AP complex subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VDL9_9STRA)

HSP 1 Score: 895 bits (2312), Expect = 0.000e+0
Identity = 463/580 (79.83%), Postives = 522/580 (90.00%), Query Frame = 1 
Query:   10 GGXXXSDARFFTTTKKGETHELKLELQSPNRDKKKDAVKKVIANMTVGKQMDMLFTDVINCIQTDSIELKKLVYLYLINYAKSQPELTLLAVNTFVKDAKDHNPLVRALAVRTMGCIRVEKITEYLCEPLRRALRDDDPYVRKTAAVCVAKLYDISPTLVEDQGFLQVLRDLICDPNPTVVANSVAALSEISETGGRDVMQITTSVLQKLLAALNECTEWGQVFILDSLARYTPADAREAGSIIERVTPRLQHANSAVVMSAVKVILTYMDDI--TDMDTVRTFSKKLAPPLVTLLNSEPEIQYVALRNINLVVQKRPKILEHEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQVLLELKEYATEVDVEFVRKAVRAIGRCAVKLENAAERCINVLLELIETKVDYVLQEAVVVIKDIFRRYPNRYESIIATLCENLETLDEPEAKASIIWILGEYAERIDNADEQLEQFLETFEEESAEVQLQLLTATVKLFLKQPEDTQELVQKVLQMATEDSDNPDLRDRGFVYWRLLSTNPEAAKAVVLSEKPTIADDTSALEPALLDLLIRQIATLASIYHK 1743
            G    SD+RFFTT KKGE HEL++EL S +R  K DAVKKVIA+MTVGK + MLFTDV+NC+QT +IELKKLVYLYLINYAKSQPELTLLAVNTFVKDA D NPL+RALAVRTMGCIRV++ITEYLCEPL RALRD+DPYVRKTAAVCVAKLYDI+P LV+++GFL+VL DLI D NP+VVAN VAALSEI+ET GRDVM+I+ +VLQKLLAALNECTEWGQVFILDSLA+YTPADAREA  IIERVTPRLQHANSAVVMSAVKVIL YM+ +   + D +R  ++KLAPPLVTLLNSEPEIQYVALRNINL+VQKRP ILE EI+VFFCKYNDPIYVKMEKLE II+LV++RNID+VLLELKEYATEVDV+FVRK+V AIGRCAVKLE AAERCI VLLELI+TKV+YV+QE+V+VIKDIFRRYPNRYESIIATLC+NL+TLDEP AKAS+IWI+GEYAERIDNADE LE FLETFEEE   VQLQLLTATVK FLK PEDTQ++VQ+VL +ATE+SDNPDLRDRGF+YWRLLST+PEAAK VVL +KP I DDT  LEP LL++LI QIATL+S+YHK
Sbjct:    8 GDSGGSDSRFFTTQKKGEMHELRMELHSTDRTAKVDAVKKVIASMTVGKDVSMLFTDVLNCVQTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDEDPYVRKTAAVCVAKLYDIAPGLVQERGFLEVLHDLISDSNPSVVANGVAALSEIAETSGRDVMKISAAVLQKLLAALNECTEWGQVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILAYMEVMGGANADAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILEDEIRVFFCKYNDPIYVKMEKLEIIIKLVSERNIDKVLLELKEYATEVDVDFVRKSVSAIGRCAVKLERAAERCIGVLLELIKTKVNYVVQESVIVIKDIFRRYPNRYESIIATLCDNLDTLDEPLAKASMIWIIGEYAERIDNADELLETFLETFEEEDPAVQLQLLTATVKCFLKNPEDTQDMVQRVLDLATEESDNPDLRDRGFIYWRLLSTDPEAAKMVVLGDKPVIEDDTYKLEPNLLNVLIGQIATLSSVYHK 587
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BLAST of mRNA_P-wetherbeei_contig574.1.1 vs. uniprot
Match: A0A7S3LFQ5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFQ5_9STRA)

HSP 1 Score: 892 bits (2305), Expect = 0.000e+0
Identity = 461/574 (80.31%), Postives = 521/574 (90.77%), Query Frame = 1 
Query:   28 DARFFTTTKKGETHELKLELQSPNRDKKKDAVKKVIANMTVGKQMDMLFTDVINCIQTDSIELKKLVYLYLINYAKSQPELTLLAVNTFVKDAKDHNPLVRALAVRTMGCIRVEKITEYLCEPLRRALRDDDPYVRKTAAVCVAKLYDISPTLVEDQGFLQVLRDLICDPNPTVVANSVAALSEISETGGRDVMQITTSVLQKLLAALNECTEWGQVFILDSLARYTPADAREAGSIIERVTPRLQHANSAVVMSAVKVILTYMDDI--TDMDTVRTFSKKLAPPLVTLLNSEPEIQYVALRNINLVVQKRPKILEHEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQVLLELKEYATEVDVEFVRKAVRAIGRCAVKLENAAERCINVLLELIETKVDYVLQEAVVVIKDIFRRYPNRYESIIATLCENLETLDEPEAKASIIWILGEYAERIDNADEQLEQFLETFEEESAEVQLQLLTATVKLFLKQPEDTQELVQKVLQMATEDSDNPDLRDRGFVYWRLLSTNPEAAKAVVLSEKPTIADDTSALEPALLDLLIRQIATLASIYHK 1743
            D+RFFTT KKGE HEL++EL S +R  K DAVKKVIA+MTVGK + MLFTDV+NC+QT +IELKKLVYLYLINYAK+QPELTLLAVNTFVKDA D NPL+RALAVRTMGCIRV++ITEYLCEPL RALRDDDPYVRKTAAVCVAKLYDI+P LV ++GFL+VL DLI D NP+VVAN VAALSEI+ET G+DVM+I+ SVLQKLLAALNECTEWGQVFILDSLA+YTPAD REA  IIERVTPRLQHANSAVVMSAVKVIL+YM+ +   + D++R  ++KLAPPLVTLLNSEPEIQYVALRNINL+VQKRP ILE+EIKVFFCKYNDPIYVKMEKLE II+LV ++NIDQVLLELKEYATEVDV+FVRKAV AIGRCAVKLE AAERCI VLLELI+TKV+YV+QE+V+VIKDIFRRYPNRYESIIATLC+NL+TLDEP AKAS+IWI+GEYAERIDNADE L+ FLETFEEE   VQLQLLTATVK FLK PEDTQ++VQ+VL +ATE+SDNPDLRDRGF+YWRLLST+PEAAK VVL +KP I DDT  L+P+LL++LI QIATL+SIYHK
Sbjct:    6 DSRFFTTQKKGEMHELRMELHSTDRAVKVDAVKKVIASMTVGKDVSMLFTDVLNCVQTGNIELKKLVYLYLINYAKTQPELTLLAVNTFVKDASDANPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDDDPYVRKTAAVCVAKLYDINPELVVERGFLEVLHDLISDSNPSVVANGVAALSEIAETSGKDVMKISASVLQKLLAALNECTEWGQVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGSANSDSIRHLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPHILENEIKVFFCKYNDPIYVKMEKLEIIIKLVTEKNIDQVLLELKEYATEVDVDFVRKAVSAIGRCAVKLERAAERCIGVLLELIQTKVNYVVQESVIVIKDIFRRYPNRYESIIATLCDNLDTLDEPLAKASMIWIIGEYAERIDNADELLDTFLETFEEEDPAVQLQLLTATVKCFLKNPEDTQDMVQRVLDLATEESDNPDLRDRGFIYWRLLSTDPEAAKMVVLGDKPVIEDDTFKLDPSLLNILIGQIATLSSIYHK 579
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BLAST of mRNA_P-wetherbeei_contig574.1.1 vs. uniprot
Match: B8C7W7_THAPS (Beta subunit of tetrameric clathrin adaptor complex AP1 n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8C7W7_THAPS)

HSP 1 Score: 887 bits (2292), Expect = 1.100e-315
Identity = 460/578 (79.58%), Postives = 519/578 (89.79%), Query Frame = 1 
Query:   25 SDARFFTTTKKGETHELKLELQSPNRDKKKDAVKKVIANMTVGKQMDMLFTDVINCIQTDSIELKKLVYLYLINYAKSQPELTLLAVNTFVKDAKDHNPLVRALAVRTMGCIRVEKITEYLCEPLRRALRDDDPYVRKTAAVCVAKLYDISPTLVEDQGFLQVLRDLICDPNPTVVANSVAALSEISETGGRDVMQITTSVLQKLLAALNECTEWGQVFILDSLARYTPADAREAGSIIERVTPRLQHANSAVVMSAVKVILTYMDDI-----TDMDTVRTFSKKLAPPLVTLLNSEPEIQYVALRNINLVVQKRPKILEHEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQVLLELKEYATEVDVEFVRKAVRAIGRCAVKLENAAERCINVLLELIETKVDYVLQEAVVVIKDIFRRYPNRYESIIATLCENLETLDEPEAKASIIWILGEYAERIDNADEQLEQFLETFEEESAEVQLQLLTATVKLFLKQPEDTQELVQKVLQMATEDSDNPDLRDRGFVYWRLLSTNPEAAKAVVLSEKPTIADDTSALEPALLDLLIRQIATLASIYHK 1743
            SD+RFF T KKGE HEL++ELQS +R  K DAVKKVIA+MTVGK +  LFTDV+NC QT +IELKKLVYLYLINYAKSQPELTLLAVNTFVKDA D NPL+RALAVRTMGCIRV++ITEYLCEPL RALRD+DPYVRKTAAVCVAKLYDI+P LV+++GF++ L DLI D NP+VVAN VAALSEISET GRDVM+I+ SVLQKLLAALNECTEWGQVFILDSLA+YTPADAREA  IIERVTPRLQHANSAVVMSAVKVIL+YMD +        D++R  ++KLAPPLVTLLNSEPEIQYVALRNINL+VQKR  ILE+EIKVFFCKYNDPIYVKMEKLE II+LV+++NIDQVLLELKEYATEVDV+FVRK+V AIGRCAVKLE AAERCI VLLELI+TKV+YV+QE+V+VIKDIFRRYPNRYESIIATLC+NL+TLDEP+AKAS+IWI+GEYAERIDNADE L+ FLETFEEE   VQLQLLTATVK FLK PE+ QE+VQ+VL +ATE+SDNPDLRDRGF+YWRLLST+PEAAK VVL +KP I DDT  LEP LL++L+ QIATL+SIYHK
Sbjct:   12 SDSRFFNTPKKGEMHELRMELQSTDRTIKVDAVKKVIASMTVGKDVSTLFTDVLNCAQTANIELKKLVYLYLINYAKSQPELTLLAVNTFVKDANDTNPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDNDPYVRKTAAVCVAKLYDIAPELVQERGFIETLHDLISDSNPSVVANGVAALSEISETSGRDVMKISASVLQKLLAALNECTEWGQVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILSYMDVMGGSGGAHADSIRALTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRSNILENEIKVFFCKYNDPIYVKMEKLEIIIKLVSEKNIDQVLLELKEYATEVDVDFVRKSVSAIGRCAVKLERAAERCIGVLLELIQTKVNYVVQESVIVIKDIFRRYPNRYESIIATLCDNLDTLDEPQAKASMIWIIGEYAERIDNADELLDTFLETFEEEDPAVQLQLLTATVKCFLKDPENCQEMVQRVLDLATEESDNPDLRDRGFIYWRLLSTDPEAAKLVVLGDKPVIEDDTFRLEPNLLNVLVGQIATLSSIYHK 589
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BLAST of mRNA_P-wetherbeei_contig574.1.1 vs. uniprot
Match: A0A4D9D0G5_9STRA (B2-adapt-app_C domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0G5_9STRA)

HSP 1 Score: 887 bits (2292), Expect = 2.950e-315
Identity = 458/575 (79.65%), Postives = 519/575 (90.26%), Query Frame = 1 
Query:   25 SDARFF-TTTKKGETHELKLELQSPNRDKKKDAVKKVIANMTVGKQMDMLFTDVINCIQTDSIELKKLVYLYLINYAKSQPELTLLAVNTFVKDAKDHNPLVRALAVRTMGCIRVEKITEYLCEPLRRALRDDDPYVRKTAAVCVAKLYDISPTLVEDQGFLQVLRDLICDPNPTVVANSVAALSEISETGGRDVMQITTSVLQKLLAALNECTEWGQVFILDSLARYTPADAREAGSIIERVTPRLQHANSAVVMSAVKVILTYMDDITDMDTVRTFSKKLAPPLVTLLNSEPEIQYVALRNINLVVQKRPKILEHEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQVLLELKEYATEVDVEFVRKAVRAIGRCAVKLENAAERCINVLLELIETKVDYVLQEAVVVIKDIFRRYPNRYESIIATLCENLETLDEPEAKASIIWILGEYAERIDNADEQLEQF-LETFEEESAEVQLQLLTATVKLFLKQPEDTQELVQKVLQMATEDSDNPDLRDRGFVYWRLLSTNPEAAKAVVLSEKPTIADDTSALEPALLDLLIRQIATLASIYHK 1743
            SD+RFF  T+KKGETHEL+ ELQS N+DKK+DAVKKVIANMTVGK + MLFTDV+NCIQT ++ELKKLVYLY+INYAKS P+L LLAVNTF KDA D NPL+RALAVRTMGCIRV++I EYLCEPL RALRDDDPYVRKTAAVCVAKLYDISP +VED+GFL VLRDLICD NPTVVAN+VAALSEI ET G+DV+ IT SVLQKLLAALNECTEWGQV+ILD+L+RY PAD  EA  I+ERVTPRLQHANSAVVMSA+KV+L YM+ + + D VRT ++KLAPPLVTLLNSEPEIQYVALRNINL+VQKRP ILEHEIKVFFCKYNDPIYVKMEKLE IIRL +DRN +QVLLELKEYA EVDV+FVR+AVRAIGR A+KLE AAERCINVLLELI+TKV+YV+QEA++VIKDIFRRYPNRYE +IA LCENLETLDEPEAKAS+IWI+GEYA+RI+NADE L+ F L++F EE+ +VQLQLLTATVK+FLKQP +TQ LVQ+VL MATE +DNPDLRDRGF+YWRLLS +P+ A+AVVL EKPTIADDT ALEPALLD LI Q+ATL+SIYHK
Sbjct:   25 SDSRFFHNTSKKGETHELREELQSQNKDKKRDAVKKVIANMTVGKDVSMLFTDVVNCIQTANVELKKLVYLYIINYAKSNPDLALLAVNTFCKDANDANPLIRALAVRTMGCIRVDRIVEYLCEPLARALRDDDPYVRKTAAVCVAKLYDISPDMVEDRGFLDVLRDLICDSNPTVVANAVAALSEIQETSGQDVILITGSVLQKLLAALNECTEWGQVYILDALSRYEPADEVEAEGIVERVTPRLQHANSAVVMSAIKVVLGYME-LCNPDVVRTLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPAILEHEIKVFFCKYNDPIYVKMEKLEIIIRLASDRNAEQVLLELKEYAQEVDVDFVRRAVRAIGRTAIKLERAAERCINVLLELIQTKVNYVVQEAIIVIKDIFRRYPNRYEQVIAALCENLETLDEPEAKASMIWIIGEYADRIENADELLDSFFLDSFLEETPQVQLQLLTATVKIFLKQPAETQALVQRVLNMATEGTDNPDLRDRGFIYWRLLSHSPQVARAVVLGEKPTIADDTFALEPALLDQLIHQLATLSSIYHK 598
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig574.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CH70_9STRA0.000e+087.61Coatomer protein complex, beta sub-unit n=1 Tax=Tr... [more]
A0A6H5J742_9PHAE0.000e+087.17B2-adapt-app_C domain-containing protein n=2 Tax=E... [more]
A0A7S1FVF1_9STRA0.000e+080.77Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S2WFD7_9STRA0.000e+079.72Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S3PZD9_9STRA0.000e+080.31Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1VQ66_9STRA0.000e+080.63Hypothetical protein n=2 Tax=Grammatophora oceanic... [more]
A0A6U3VDL9_9STRA0.000e+079.83AP complex subunit beta n=1 Tax=Ditylum brightwell... [more]
A0A7S3LFQ5_9STRA0.000e+080.31Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
B8C7W7_THAPS1.100e-31579.58Beta subunit of tetrameric clathrin adaptor comple... [more]
A0A4D9D0G5_9STRA2.950e-31579.65B2-adapt-app_C domain-containing protein n=3 Tax=M... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig574contigP-wetherbeei_contig574:4913..9485 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LDW2
PFAMsAdaptin_N,Alpha_adaptinC2,B2-adapt-app_C
Model size1746
Max annot lvl2759|Eukaryota
KEGG koko:K11825,ko:K12392
KEGG Pathwayko04142,ko04144,ko04721,ko04961,ko05016,map04142,map04144,map04721,map04961,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000278,GO:0000281,GO:0000910,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005798,GO:0005886,GO:0005905,GO:0005911,GO:0006950,GO:0006970,GO:0006971,GO:0006996,GO:0007033,GO:0007049,GO:0007154,GO:0008150,GO:0009267,GO:0009506,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0012505,GO:0012506,GO:0012510,GO:0016020,GO:0016043,GO:0016050,GO:0022402,GO:0030054,GO:0030117,GO:0030118,GO:0030119,GO:0030120,GO:0030121,GO:0030122,GO:0030125,GO:0030128,GO:0030130,GO:0030131,GO:0030132,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030140,GO:0030587,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0030665,GO:0030666,GO:0030669,GO:0031090,GO:0031152,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032502,GO:0032991,GO:0033298,GO:0033554,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044764,GO:0045334,GO:0048475,GO:0048856,GO:0050896,GO:0051301,GO:0051703,GO:0051704,GO:0051716,GO:0055044,GO:0061640,GO:0071496,GO:0071840,GO:0071944,GO:0090702,GO:0097708,GO:0098588,GO:0098630,GO:0098743,GO:0098796,GO:0098797,GO:0098805,GO:0099120,GO:1903047
Exons11
Evalue0.0
EggNOG OGsCOG5096@1|root,KOG1061@2759|Eukaryota
Ec32 ortholog descriptionCoatomer protein complex, beta sub-unit
Ec32 orthologEc-08_003580.1
Descriptionclathrin binding
Cds size1746
COG categoryU
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig574.1.1prot_P-wetherbeei_contig574.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig574 4913..9485 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186851.3656592-CDS-P-wetherbeei_contig574:4912..49701683186851.3656592-CDS-P-wetherbeei_contig574:4912..4970Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig574 4913..4970 +
1683186851.3788517-CDS-P-wetherbeei_contig574:5391..54621683186851.3788517-CDS-P-wetherbeei_contig574:5391..5462Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig574 5392..5462 +
1683186851.397156-CDS-P-wetherbeei_contig574:5776..60671683186851.397156-CDS-P-wetherbeei_contig574:5776..6067Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig574 5777..6067 +
1683186851.4110909-CDS-P-wetherbeei_contig574:6316..64061683186851.4110909-CDS-P-wetherbeei_contig574:6316..6406Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig574 6317..6406 +
1683186851.4212108-CDS-P-wetherbeei_contig574:6619..67841683186851.4212108-CDS-P-wetherbeei_contig574:6619..6784Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig574 6620..6784 +
1683186851.4314287-CDS-P-wetherbeei_contig574:7081..72071683186851.4314287-CDS-P-wetherbeei_contig574:7081..7207Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig574 7082..7207 +
1683186851.44158-CDS-P-wetherbeei_contig574:7422..76021683186851.44158-CDS-P-wetherbeei_contig574:7422..7602Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig574 7423..7602 +
1683186851.4523437-CDS-P-wetherbeei_contig574:7938..80311683186851.4523437-CDS-P-wetherbeei_contig574:7938..8031Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig574 7939..8031 +
1683186851.4631114-CDS-P-wetherbeei_contig574:8289..84361683186851.4631114-CDS-P-wetherbeei_contig574:8289..8436Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig574 8290..8436 +
1683186851.4735577-CDS-P-wetherbeei_contig574:8683..89141683186851.4735577-CDS-P-wetherbeei_contig574:8683..8914Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig574 8684..8914 +
1683186851.4847057-CDS-P-wetherbeei_contig574:9191..94851683186851.4847057-CDS-P-wetherbeei_contig574:9191..9485Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig574 9192..9485 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig574.1.1

>prot_P-wetherbeei_contig574.1.1 ID=prot_P-wetherbeei_contig574.1.1|Name=mRNA_P-wetherbeei_contig574.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=582bp
RATGGGGGSDARFFTTTKKGETHELKLELQSPNRDKKKDAVKKVIANMTV
GKQMDMLFTDVINCIQTDSIELKKLVYLYLINYAKSQPELTLLAVNTFVK
DAKDHNPLVRALAVRTMGCIRVEKITEYLCEPLRRALRDDDPYVRKTAAV
CVAKLYDISPTLVEDQGFLQVLRDLICDPNPTVVANSVAALSEISETGGR
DVMQITTSVLQKLLAALNECTEWGQVFILDSLARYTPADAREAGSIIERV
TPRLQHANSAVVMSAVKVILTYMDDITDMDTVRTFSKKLAPPLVTLLNSE
PEIQYVALRNINLVVQKRPKILEHEIKVFFCKYNDPIYVKMEKLETIIRL
VNDRNIDQVLLELKEYATEVDVEFVRKAVRAIGRCAVKLENAAERCINVL
LELIETKVDYVLQEAVVVIKDIFRRYPNRYESIIATLCENLETLDEPEAK
ASIIWILGEYAERIDNADEQLEQFLETFEEESAEVQLQLLTATVKLFLKQ
PEDTQELVQKVLQMATEDSDNPDLRDRGFVYWRLLSTNPEAAKAVVLSEK
PTIADDTSALEPALLDLLIRQIATLASIYHKV
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mRNA from alignment at P-wetherbeei_contig574:4913..9485+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig574.1.1 ID=mRNA_P-wetherbeei_contig574.1.1|Name=mRNA_P-wetherbeei_contig574.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4573bp|location=Sequence derived from alignment at P-wetherbeei_contig574:4913..9485+ (Phaeothamnion wetherbeei SAG_119_79)
CGCGCCACGGGCGGCGGCGGAGGGAGTGATGCGCGTTTCTTCACAACCAC
CAAGAAAGGTGCCTTGATCCCACGCGAGCGCTCAAAATTTTGTCTCCGTG
AATGTGTCTGTCTTTCTTCTTGGTTGGGAACAGGGCAAAGGGAAGTTATA
GTAATTTTTGCTGCATCGGCCGCTGTTGTGGGTGGTGAAAGATTTTTCCC
CCGTCGCCTAACCTTCGCGCTAAAACCATAGACGGCGCGTGCTGAAGCAT
GAAAGCTTCAGTTCTGGCGAGGGCCCAGAAATCTCTTGCACATTCCGTTT
TTTCAGAATTTTCTGTTTGCTTTCTGTAGTTCACTTGCTCGCGATTTCAT
GCTCCTTGTCGCGCGAAGAGGGCGGGGACGCCGTGCATAAGAAAGCCTGC
CACAGTCGCCAACTTTCGCTTCCTGTCGCAAGATCATCGCTGAAACTGCC
GTAATGCCATGACCACCTTGCACCCTCAGGAGAGACGCACGAGCTCAAGC
TGGAGCTCCAGTCGCCGAACCGCGACAAGAAGAAGGATGCCGTGAAGAAG
GTGCGCTAGATATTTTAAAAGGAACGTTGGAATTCTGAAACTCTGCTTTG
ACTAGGGAAGATTCATGTCGAGGGGGCAGTTTCAGTTCATGGCCCCAGCT
GAAGCCTTTCGTGTCTTTACCACTCTTCCGTCCGTCATGCTGCCGGCCCG
ACCCCGGTGGTATCGAGGCTGACACCCAGAAACCCCCATAGAACAAACTC
TTCAAATCACATACCCCTTTTTTAAAACAACCCCTAAAAATCCAAACTGA
CACCACCCCGCGAACCTTTGAATCCGCGGAAACCGCTGAAACTGCAAACC
AACCCCTTATGCAGGTGATCGCCAACATGACGGTGGGCAAGCAGATGGAC
ATGCTCTTCACGGACGTCATCAACTGCATCCAGACCGATTCCATCGAGCT
GAAAAAACTCGTCTACCTCTATCTGATCAACTACGCCAAGTCGCAGCCCG
AGCTGACGCTGCTGGCGGTCAATACCTTTGTGAAAGACGCCAAGGACCAC
AACCCGCTGGTGCGCGCTCTGGCCGTACGCACCATGGGGTGCATCCGCGT
CGAGAAGATCACCGAATACCTGTGCGAGCCGCTGCGCCGGGCACTGCGCG
ACGACGTGAGTGAAAGGGGGAGGAGCGGGGTCGCTTGCGCATTCCTGGGA
GGATTTAATAGGGTTCGCTGCATTATCATTATCTTTCTGTTTCCTGCTTT
TGCGTATTGTCTTTCGCTGCTCATACTATCTTTCCTTAGGTTGGTTGGAG
GGAAAGAAAGGAGAAGCCCTCCGAACATCCTTCCTCTCCTAGCCCGCTAT
CAATCAATCCTGCGTGTTGTTGTCTTTGGTTCTGTCGTCTCTGGCTATCG
GCAGGACCCGTACGTCCGCAAGACGGCGGCTGTGTGCGTGGCGAAGCTCT
ACGACATCAGCCCCACCCTCGTCGAGGACCAGGGATTCCTCCAGGTGCAT
GACATATCCTTTTGCTTTCCTCTTCAGTTGTTTTCTCCCCGGGCTGACTT
TTTGCTGTCGCCTTGGCGGCGCCAAATCAACGGCTTCTTCTGGATCAGTG
TCTGGCGCGCCACCACCCGCTTGCTGCCACCAAGGCTCGAGCCTTTCCTC
TCCCGTATCGTACTTTGTATCGCGTCTCGTTGTCCTTATTCCTTCATTTG
CTGGCAGGTGCTGCGGGACCTGATCTGCGACCCGAACCCGACTGTGGTGG
CCAACTCGGTGGCGGCGCTGTCGGAGATCTCCGAGACGGGCGGCCGGGAC
GTGATGCAGATCACCACCTCGGTGCTACAGAAGCTCCTCGCCGCTCTCAA
CGAGTGTACCGAGTGGGGGCAGGTGAGATTGCAGAAAGGAGCGAGGGGGT
GGGAAGCAACGCAGAAATGCGCTGGGAGCCTCAGGTTTTAGTTTTCCAGC
CACTGGTTGTCGTGGCGGGGCTTCGGCATTCAGGGTTGCAGTGCCTGCCT
TTCCGTTAGGATTTTTGTTCCGCTTTTACTGCCATCTGTTCTCTCTGCCT
TGTCAATCTCATAGAGAGGTTCCGTAGAGAGGTTCCATAGAGAGGTTTTT
GCGCTGCATCAAAAAGATACTGTAAGCTTCTGGATTTTTCTCCCCCTTCT
TCTCGCTGCGGCAACTCAGGTGTTCATCCTGGACTCGCTGGCGCGCTACA
CGCCGGCGGACGCGCGGGAGGCGGGCTCCATCATCGAGCGCGTCACACCG
CGGCTGCAGCATGCCAACTCCGCCGTCGTCATGTCTGCCGTCAAGGTGCG
CGCTACTTTGCGTCGCGTTTTTTTCCGTATCTCTGCGTTCATCTCTGGCG
TTGGGGCTGCAGTGGGCGGGTCGTATTGCCCCTCTCCACCTTGCTTATTT
CTTCTCTCCCTCGTTATTCTTCCTGCACCGACTCTGATCTGCCTGCCGAT
CTGGCCTGGACCGGATCCGCCTGGCGACCTGCGATCTGCAACCTCGTGAT
CCTCGAGCAGGTGATCCTGACGTACATGGATGACATCACGGACATGGACA
CGGTGCGGACCTTCTCCAAGAAGCTGGCACCTCCCTTGGTGACGTTGCTC
AACAGCGAGCCCGAGATCCAGTATGTGGCGCTCCGCAACATCAACCTCGT
CGTGCAGAAGCGCCCCAAGATCCTCGAGCACGAAATTAAGGTAAAGTACT
GTAAATGTACTCGCTTTTACTCCTTCCTATTTCCGCTTGCCTCTTTCGCA
TCTCGATATTGTCGGTTCTGTCGGCGCAGTCGGTGCGCCACTTGGTTTGG
TGTAGTTGAGAGTCTCCTTCTCTCTTCAGGGACTGGTCGACCAGCGTCGG
TTCGTGTTTTTTTTTGGGAGTCAGTTTGAAGGCGGGTGCGGGTGGCGGGC
GGGCCGGGATTGCCACCATCTTTTTCTTCCTGTCAACTTACTCAGGCCCC
GCCGGCCTTTCTCCCTCTGCGCTCTTTACGTTTCTGTCTTTCTGACTTTT
TGACTTTGTGTTTTCTGTGATTGCAGGTATTCTTCTGCAAATACAACGAT
CCCATCTACGTCAAGATGGAGAAGCTCGAGACCATCATTCGCCTCGTCAA
CGACCGCAACATCGACCAGGTAAATTGGCGGTGAACAAATAGGGAGGAAC
GGTGATGGGCCAAAAAGAGAAGATTTGGTTCCGGGATCCGTTTGTCTGAT
GATGTGCTTTTCTTCCAAGACTTCATGGTCCACTTGGCATCAAATCCAGT
CTCCCTGCCCTGAGAGAGCGAGGTGGCAGAAGGTGGAAAAGAGGAAGCCG
CCTGCAACCTTATCAAATACATCGTTAAATCTTCTGCAAAACCACTTCAA
CCTCCCAACCTAACCCTGCAAGACCAGGTGCTGCTGGAGCTGAAGGAGTA
CGCGACAGAGGTGGACGTGGAGTTTGTGCGCAAGGCGGTGCGCGCCATCG
GGCGCTGCGCGGTCAAGCTCGAGAATGCCGCCGAGCGCTGCATCAACGTC
CTGCTCGAGCTCATCGAGACCAAGGTGAGAAAAGATTGCGACAGCCAGCG
TTACGTTCCTGCTTTCGGCTGGCCGGGGAGGGTATAACCACACTGTAGAA
GACTCAGAAAGATGTCTAGAGGATTCCTAACCGCTGCGCTCTGTGCTCCG
GCCTCTAACTTTGAGATCTTCTGGAAAGTTCCCTTTCCCGTCACTTCTCC
CTTTCAAAATTCTTTCCTTCCCCCTTCCAAATCGCCTTTCTGCTAAAACG
ACAAATCTCGCGAACGACCAGGTGGACTACGTGCTGCAGGAGGCGGTGGT
GGTGATCAAGGATATCTTCCGGCGCTACCCGAATCGCTACGAGAGCATCA
TTGCCACGCTGTGCGAGAACCTCGAGACGCTCGACGAACCCGAGGCCAAG
GCCAGCATCATCTGGATCTTGGGGGAGTACGCGGAGCGCATCGACAACGC
CGACGAGCAGCTCGAGCAGTTCCTCGAGACCTTCGAGGAGGAGTCCGCCG
AGGTCGGTCACAAATCTTAGATGCTCATGCAATTTCTGTTCCGTCTATGT
CTTTTGTTTCTTTTTGCCTCCCTTTTCAGTCCTCTTACTTTCTTGTAGCA
TTTTGTTCTATTTCTGGTTCCTTTTTCTCGTCTTTGCTTTTTTCTTCTTG
TTCCATTACCGCTAGGTTCCATTTCGTAACGTTCTGCCCACGGCCTGACC
CAGGAGTACTGTTTCTTACGTTACACAAAATTTGTCCACCCGCTCGTCAA
ACCCCCGCTTGTGGAAAAAATCCCAACAGGTGCAGCTGCAGCTGTTGACG
GCGACGGTGAAGTTGTTCCTGAAGCAGCCAGAGGACACGCAGGAGCTGGT
GCAGAAGGTGCTCCAGATGGCCACGGAGGACAGCGACAACCCTGACCTGC
GCGATCGCGGCTTCGTCTACTGGCGCCTCCTCTCCACCAACCCCGAGGCC
GCCAAGGCGGTGGTGCTGTCGGAGAAGCCGACCATCGCGGATGACACGTC
GGCACTGGAGCCGGCGCTGCTCGACCTCCTCATTCGCCAGATTGCAACCC
TCGCCTCTATCTACCACAAGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig574:4913..9485+

>mRNA_P-wetherbeei_contig574.1.1 ID=mRNA_P-wetherbeei_contig574.1.1|Name=mRNA_P-wetherbeei_contig574.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1746bp|location=Sequence derived from alignment at P-wetherbeei_contig574:4913..9485+ (Phaeothamnion wetherbeei SAG_119_79)
CGCGCCACGGGCGGCGGCGGAGGGAGTGATGCGCGTTTCTTCACAACCAC
CAAGAAAGGAGAGACGCACGAGCTCAAGCTGGAGCTCCAGTCGCCGAACC
GCGACAAGAAGAAGGATGCCGTGAAGAAGGTGATCGCCAACATGACGGTG
GGCAAGCAGATGGACATGCTCTTCACGGACGTCATCAACTGCATCCAGAC
CGATTCCATCGAGCTGAAAAAACTCGTCTACCTCTATCTGATCAACTACG
CCAAGTCGCAGCCCGAGCTGACGCTGCTGGCGGTCAATACCTTTGTGAAA
GACGCCAAGGACCACAACCCGCTGGTGCGCGCTCTGGCCGTACGCACCAT
GGGGTGCATCCGCGTCGAGAAGATCACCGAATACCTGTGCGAGCCGCTGC
GCCGGGCACTGCGCGACGACGACCCGTACGTCCGCAAGACGGCGGCTGTG
TGCGTGGCGAAGCTCTACGACATCAGCCCCACCCTCGTCGAGGACCAGGG
ATTCCTCCAGGTGCTGCGGGACCTGATCTGCGACCCGAACCCGACTGTGG
TGGCCAACTCGGTGGCGGCGCTGTCGGAGATCTCCGAGACGGGCGGCCGG
GACGTGATGCAGATCACCACCTCGGTGCTACAGAAGCTCCTCGCCGCTCT
CAACGAGTGTACCGAGTGGGGGCAGGTGTTCATCCTGGACTCGCTGGCGC
GCTACACGCCGGCGGACGCGCGGGAGGCGGGCTCCATCATCGAGCGCGTC
ACACCGCGGCTGCAGCATGCCAACTCCGCCGTCGTCATGTCTGCCGTCAA
GGTGATCCTGACGTACATGGATGACATCACGGACATGGACACGGTGCGGA
CCTTCTCCAAGAAGCTGGCACCTCCCTTGGTGACGTTGCTCAACAGCGAG
CCCGAGATCCAGTATGTGGCGCTCCGCAACATCAACCTCGTCGTGCAGAA
GCGCCCCAAGATCCTCGAGCACGAAATTAAGGTATTCTTCTGCAAATACA
ACGATCCCATCTACGTCAAGATGGAGAAGCTCGAGACCATCATTCGCCTC
GTCAACGACCGCAACATCGACCAGGTGCTGCTGGAGCTGAAGGAGTACGC
GACAGAGGTGGACGTGGAGTTTGTGCGCAAGGCGGTGCGCGCCATCGGGC
GCTGCGCGGTCAAGCTCGAGAATGCCGCCGAGCGCTGCATCAACGTCCTG
CTCGAGCTCATCGAGACCAAGGTGGACTACGTGCTGCAGGAGGCGGTGGT
GGTGATCAAGGATATCTTCCGGCGCTACCCGAATCGCTACGAGAGCATCA
TTGCCACGCTGTGCGAGAACCTCGAGACGCTCGACGAACCCGAGGCCAAG
GCCAGCATCATCTGGATCTTGGGGGAGTACGCGGAGCGCATCGACAACGC
CGACGAGCAGCTCGAGCAGTTCCTCGAGACCTTCGAGGAGGAGTCCGCCG
AGGTGCAGCTGCAGCTGTTGACGGCGACGGTGAAGTTGTTCCTGAAGCAG
CCAGAGGACACGCAGGAGCTGGTGCAGAAGGTGCTCCAGATGGCCACGGA
GGACAGCGACAACCCTGACCTGCGCGATCGCGGCTTCGTCTACTGGCGCC
TCCTCTCCACCAACCCCGAGGCCGCCAAGGCGGTGGTGCTGTCGGAGAAG
CCGACCATCGCGGATGACACGTCGGCACTGGAGCCGGCGCTGCTCGACCT
CCTCATTCGCCAGATTGCAACCCTCGCCTCTATCTACCACAAGGTG
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