mRNA_P-wetherbeei_contig57381.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57381.1.1 vs. uniprot
Match: A0A7C4TUZ3_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TUZ3_9HYPH) HSP 1 Score: 196 bits (499), Expect = 7.410e-62 Identity = 93/135 (68.89%), Postives = 112/135 (82.96%), Query Frame = 1
Query: 1 RIVGLGFRYWMLGLNTGDIGAWEKAWDLYCGLFGTAGAKVAVGQLSHWVSAMESASCRDIEVFPERCRSFCRDECIAVSMIAACQHNTCPAMQACALALLENARVDEMIGKAQAFAGTLASLEHRLSPQSIMITA 405
R+VGLGFRYWMLGLNTG+I WEKAW LY GLFG A AKVAVG+L+ WV A+ +ASCRDI V PE C SFCRDECIA++MIAACQH+TCPAM+ACA AL+E++ +D ++ KAQ FA TL++LEHRLS SI+ A
Sbjct: 26 RVVGLGFRYWMLGLNTGNIRCWEKAWSLYSGLFGAASAKVAVGELASWVGALNTASCRDIAVLPETCASFCRDECIAIAMIAACQHHTCPAMRACAFALIESSMIDGVVCKAQTFADTLSALEHRLSSGSIVAAA 160
BLAST of mRNA_P-wetherbeei_contig57381.1.1 vs. uniprot
Match: UPI00036281C7 (hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI00036281C7) HSP 1 Score: 152 bits (384), Expect = 2.470e-44 Identity = 74/142 (52.11%), Postives = 99/142 (69.72%), Query Frame = 1
Query: 1 RIVGLGFRYWMLGLNTGDIGAWEKAWDLYCGLFGTAGAKVAVGQLSHWVSAMESASCRDIEVFPERCRSFCRDECIAVSMIAACQHNTCPAMQACALALLENARVDEMIGKAQAFAGTLASLEHRLSPQSIMITAACPVRGH 426
R++GLGFRYW+ G +GDI WE+AW +Y G A+ AV +LS WV A+ +A+ R+IEV C FCRDEC+AVSMIAACQHNTCPAM+ACA AL+E++ +DE++ A++FA T+ L+ LSP I+ AA H
Sbjct: 29 RLIGLGFRYWVAGYKSGDIDRWEEAWRIYAKALGPNAARTAVSELSAWVRAVSAAARREIEVCSGDCAGFCRDECLAVSMIAACQHNTCPAMRACAFALIESSLIDEVVHHAESFAVTMRGLDQVLSPGLIVNAAAYASASH 170
BLAST of mRNA_P-wetherbeei_contig57381.1.1 vs. uniprot
Match: V5SI63_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 TaxID=1029756 RepID=V5SI63_9HYPH) HSP 1 Score: 152 bits (383), Expect = 3.300e-44 Identity = 73/136 (53.68%), Postives = 98/136 (72.06%), Query Frame = 1
Query: 1 RIVGLGFRYWMLGLNTGDIGAWEKAWDLYCGLFGTAGAKVAVGQLSHWVSAMESASCRDIEVFPERCRSFCRDECIAVSMIAACQHNTCPAMQACALALLENARVDEMIGKAQAFAGTLASLEHRLSPQSIMITAA 408
R++GLGFRYW+ G +GDI WE+AW +Y G A+ AV +LS WV A+ +A+ R+IEV C FCRDEC+AVSMIAACQHNTCPAM+ACA AL+E++ +DE++ A++FA T+ L+ LSP I+ AA
Sbjct: 27 RLIGLGFRYWVAGYKSGDIDRWEEAWRIYSSALGANAARTAVSELSAWVRAVSAAARREIEVCAGDCAGFCRDECLAVSMIAACQHNTCPAMRACAFALIESSLIDEVVHHAESFAVTMRGLDQVLSPGLIVNAAA 162
BLAST of mRNA_P-wetherbeei_contig57381.1.1 vs. uniprot
Match: A0A2W4L359_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4L359_9PROT) HSP 1 Score: 151 bits (382), Expect = 4.970e-44 Identity = 74/141 (52.48%), Postives = 95/141 (67.38%), Query Frame = 1
Query: 1 RIVGLGFRYWMLGLNTGDIGAWEKAWDLYCGLFGTAGAKVAVGQLSHWVSAMESASCRDIEVFPERCRSFCRDECIAVSMIAACQHNTCPAMQACALALLENARVDEMIGKAQAFAGTLASLEHRLSPQSI-MITAACPVR 420
R+VGLGFR W+ G TGDI WE+AW LY G A+ AV L+ WV A+ ASCR IEV+PE+CR FCRDEC+A++M+AA QH CPA++ACA ALLEN+ +D+++ A+ L S LSP SI A CP+R
Sbjct: 29 RLVGLGFRAWLAGYQTGDISCWEEAWSLYSETLGPEQARPAVEDLACWVRAIRKASCRAIEVYPEQCRGFCRDECMAIAMVAASQHGACPALRACAFALLENSAIDDVVEGAECLGARLKSCNKILSPNSICQAVAFCPLR 169
BLAST of mRNA_P-wetherbeei_contig57381.1.1 vs. uniprot
Match: A0A2W4RPY6_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RPY6_9PROT) HSP 1 Score: 151 bits (381), Expect = 7.260e-44 Identity = 72/143 (50.35%), Postives = 99/143 (69.23%), Query Frame = 1
Query: 1 RIVGLGFRYWMLGLNTGDIGAWEKAWDLYCGLFGTAGAKVAVGQLSHWVSAMESASCRDIEVFPERCRSFCRDECIAVSMIAACQHNTCPAMQACALALLENARVDEMIGKAQAFAGTLASLEHRLSPQSIMITAA-CPVRGH 426
R+VGLGFR W+ G TGDI WE+AW++Y G A+ A+ L+ WV A+ +ASC+ IEVFP +C FCRDEC+A++M+AA QH CPA++ACA AL+E++ +DE++ A+ TL S + LSP SI AA CP+R H
Sbjct: 30 RLVGLGFRAWLAGYETGDIRCWEQAWNMYSDALGPTQARAALTDLACWVRAIRNASCKPIEVFPGKCAQFCRDECMAIAMVAASQHGACPALRACAWALIESSAIDEVVEGAECLGATLKSCQKVLSPASICAFAALCPLRPH 172
BLAST of mRNA_P-wetherbeei_contig57381.1.1 vs. uniprot
Match: UPI000931BCBC (hypothetical protein n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI000931BCBC) HSP 1 Score: 142 bits (357), Expect = 2.960e-40 Identity = 70/136 (51.47%), Postives = 94/136 (69.12%), Query Frame = 1
Query: 1 RIVGLGFRYWMLGLNTGDIGAWEKAWDLYCGLFGTAGAKVAVGQLSHWVSAMESASCRDIEVFPERCRSFCRDECIAVSMIAACQHNTCPAMQACALALLENARVDEMIGKAQAFAGTLASLEHRLSPQSIMITAA 408
R++GLGFRYW+ G +GDI WE AW +Y G A+ AV +LS WV A+ +A+ R+IEV C FCRDE +A+SMIAACQHNTCPAM+ACA AL+E++ +DE++ A+ FA T+ L+ L P I+ AA
Sbjct: 27 RLIGLGFRYWVAGYKSGDIDRWEDAWRIYSHALGPNAARTAVSELSAWVRAVSAAARREIEVRHGDCDGFCRDESLALSMIAACQHNTCPAMRACAFALIESSLIDEVVHHAETFAVTMRGLDQVLPPALIVNAAA 162
BLAST of mRNA_P-wetherbeei_contig57381.1.1 vs. uniprot
Match: A0A7C2RCJ8_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2RCJ8_9HYPH) HSP 1 Score: 137 bits (345), Expect = 1.680e-38 Identity = 66/128 (51.56%), Postives = 83/128 (64.84%), Query Frame = 1
Query: 1 RIVGLGFRYWMLGLNTGDIGAWEKAWDLYCGLFGTAGAKVAVGQLSHWVSAMESASCRDIEVFPERCRSFCRDECIAVSMIAACQHNTCPAMQACALALLENARVDEMIGKAQAFAGTLASLEHRLSP 384
++VGLGFR+W+ G TGDI WE+AW Y G A AK AV LS WV A+ + RD+E +P C FCRDECIA+ MIAACQHN CPAM+ACA ALL + ++E++ A FA T+ L P
Sbjct: 23 QLVGLGFRFWLTGFRTGDISCWERAWCAYSNALGAAAAKGAVRDLSAWVRAINRHAQRDLETYPADCDRFCRDECIAIDMIAACQHNACPAMRACAFALLGCSLIEEVVQGAGCFAATMRGANQMLPP 150
BLAST of mRNA_P-wetherbeei_contig57381.1.1 vs. uniprot
Match: A0A6N6SSZ2_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SSZ2_9HYPH) HSP 1 Score: 134 bits (338), Expect = 1.760e-37 Identity = 65/128 (50.78%), Postives = 84/128 (65.62%), Query Frame = 1
Query: 1 RIVGLGFRYWMLGLNTGDIGAWEKAWDLYCGLFGTAGAKVAVGQLSHWVSAMESASCRDIEVFPERCRSFCRDECIAVSMIAACQHNTCPAMQACALALLENARVDEMIGKAQAFAGTLASLEHRLSP 384
R+VGLGFRYW+ G TGDI WE+AW Y G A AK A+ LS WV A+ + RD+E C FCRDEC+A++MIAACQHN CPAM+ACA +LL + +DE++ A+ FA T+ + L P
Sbjct: 20 RLVGLGFRYWLAGFRTGDISCWERAWCAYSNALGAAAAKGALTDLSCWVRAINRHAQRDLETAAVDCDRFCRDECVAIAMIAACQHNACPAMRACAFSLLGCSMIDEVVQGAENFAATMRGADQVLLP 147
BLAST of mRNA_P-wetherbeei_contig57381.1.1 vs. uniprot
Match: A0A0D6JFL3_9HYPH (Uncharacterized protein n=1 Tax=Candidatus Filomicrobium marinum TaxID=1608628 RepID=A0A0D6JFL3_9HYPH) HSP 1 Score: 134 bits (338), Expect = 2.500e-37 Identity = 63/132 (47.73%), Postives = 92/132 (69.70%), Query Frame = 1
Query: 1 RIVGLGFRYWMLGLNTGDIGAWEKAWDLYCGLFGTAGAKVAVGQLSHWVSAMESASCRDIEVFPERCRSFCRDECIAVSMIAACQHNTCPAMQACALALLENARVDEMIGKAQAFAGTLASLEHRLSPQSIM 396
++VG GFR W+ G TG+IG WE+ W +Y G AKV VG+LS W A+++ + R +EV P +FCRDEC+A+SMIAA QH TCPAM+ACA AL+E++ ++E++ + +FA T+ SL+ +SP I+
Sbjct: 33 QLVGFGFRGWIAGYQTGNIGCWERVWQVYSNALGPRAAKVVVGELSVWAKAVKAGARRKVEVGPIEACNFCRDECLAISMIAASQHRTCPAMRACAFALIESSLIEEVVHHSDSFAITMRSLDQVISPNWIV 164
BLAST of mRNA_P-wetherbeei_contig57381.1.1 vs. uniprot
Match: A0A537REH1_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537REH1_9PROT) HSP 1 Score: 134 bits (336), Expect = 3.540e-37 Identity = 65/128 (50.78%), Postives = 82/128 (64.06%), Query Frame = 1
Query: 1 RIVGLGFRYWMLGLNTGDIGAWEKAWDLYCGLFGTAGAKVAVGQLSHWVSAMESASCRDIEVFPERCRSFCRDECIAVSMIAACQHNTCPAMQACALALLENARVDEMIGKAQAFAGTLASLEHRLSP 384
R+VGLGFRYW+ G TGDI WE+AW Y + G AK AV LS WV A+ + RD+E C FCRDECIA+ MI+ACQH CPAM+ACA ALL + +DE++ A+ FA T+ + L P
Sbjct: 20 RLVGLGFRYWLKGFRTGDISCWERAWSAYSNVLGATAAKSAVTDLSCWVRAINRHARRDLETAAVDCERFCRDECIAIEMISACQHAACPAMRACAFALLGCSLIDEVVHGAENFAATMRGADQVLPP 147 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57381.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57381.1.1 >prot_P-wetherbeei_contig57381.1.1 ID=prot_P-wetherbeei_contig57381.1.1|Name=mRNA_P-wetherbeei_contig57381.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp MLGLNTGDIGAWEKAWDLYCGLFGTAGAKVAVGQLSHWVSAMESASCRDIback to top mRNA from alignment at P-wetherbeei_contig57381:3..443+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57381.1.1 ID=mRNA_P-wetherbeei_contig57381.1.1|Name=mRNA_P-wetherbeei_contig57381.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig57381:3..443+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57381:3..443+ >mRNA_P-wetherbeei_contig57381.1.1 ID=mRNA_P-wetherbeei_contig57381.1.1|Name=mRNA_P-wetherbeei_contig57381.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig57381:3..443+ (Phaeothamnion wetherbeei SAG_119_79)back to top |