mRNA_P-wetherbeei_contig5738.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5738.1.1
Unique NamemRNA_P-wetherbeei_contig5738.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5738.1.1 vs. uniprot
Match: D7FRZ5_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRZ5_ECTSI)

HSP 1 Score: 392 bits (1008), Expect = 9.420e-131
Identity = 202/375 (53.87%), Postives = 270/375 (72.00%), Query Frame = 1
Query:    1 FGFGFCVAILLGFVYVILMRLPGLVFLLVWACILLVLAGLGGLGYGLYVTYESWDSEDPSTHTSYQINGALGLAITCWVLCFIWFCLICFLRDRISLAIGIIKEASRAVAAMPLLVFFPFLQLVGLVCFLACWVVYAIYTASLGDYTTDSVT--VNDVTLNYVSFSYSDEIEYRGWFLLFCLFWTSAFIIAVGQIVIAMAVSTWYFSRNKDDVGSGTVIACTFKSMFFHTGTAAFGSLIIAIIQMIEATAIFSTNFCTSAAKAFWLIARNIGRIGAVTVLSEFILIIMEVFIMLAAGGLSYLAMSETIEDDLNSIIGPVVMVMILAFFVANMFMSVYGMAISTVLQCFIADEEMFAPGDRFAEHDLRDWVDEHGS 1119
            FGFGF VA L+ FVY+ L+++P LV +LVW+C+LLVL  L GLGYGL+VT   WD  D  T   Y +  A   A+  WVL F+W CL CFL  RI+LAIG+IKEA R++A+MP++VF+P ++LV  + F+A W+ YA YTASLGD TT +V        L+Y  + +  +++YRGWFLLFCLFWT  FI A+GQIVIAM+V++WYF+R+K  VGS TV++   K+  FH GTAAFG LI+AI++    TAIFSTNFCTSA  AF+LIARNI R+ AV++L EF+L +M +F+ +      Y+AM   I   LNS++GP +M  +LA++   M   VYGMAI+T+LQCF+ADEE+F P  +FAE+DLR WVD+HG+
Sbjct:  104 FGFGFGVATLVAFVYIGLLQIPFLVAILVWSCVLLVLLCLLGLGYGLWVTAVDWD--DDGTKEDYIVTAAYACAVVAWVLAFLWTCLFCFLAKRIALAIGVIKEAGRSIASMPIIVFWPVVELVASIAFVAIWMYYAAYTASLGDITTKTVESDTGGYDLSYKVYDFDQQVQYRGWFLLFCLFWTLNFITAMGQIVIAMSVASWYFARHKSHVGSLTVVSSVGKTFTFHIGTAAFGGLIVAIVE----TAIFSTNFCTSARNAFYLIARNIARVAAVSILGEFVLNVMTLFVCVVTTLGVYVAMDSNIRSQLNSLVGPTIMTAVLAYYTGKMVTGVYGMAITTILQCFVADEELFPPSQQFAENDLRGWVDKHGA 472          
BLAST of mRNA_P-wetherbeei_contig5738.1.1 vs. uniprot
Match: A0A6H5JW76_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW76_9PHAE)

HSP 1 Score: 378 bits (970), Expect = 1.880e-123
Identity = 207/423 (48.94%), Postives = 273/423 (64.54%), Query Frame = 1
Query:    1 FGFGFCVAILLGFVYVILMRLPGLVFLLVWACILLVLAGLGGLGYGLYVTYESWDSEDPSTHTSYQINGALGLAITCWVLCFIWFCLICFLRDRISLAIGIIKEASRAVAAMPLLVFFPFLQLVGLVCFLACWVVYAIYTASLGDYTTDSVT--VNDVTLNYVSFSYSDEIEYRGWFLLFCLFWTSAFIIAVGQ---IVIAMAVSTWYFSRNKDDVGSGTVIACTFKSMFFHTGTAAFGSLIIAIIQMIEA---------------------------------------------TAIFSTNFCTSAAKAFWLIARNIGRIGAVTVLSEFILIIMEVFIMLAAGGLSYLAMSETIEDDLNSIIGPVVMVMILAFFVANMFMSVYGMAISTVLQCFIADEEMFAPGDRFAEHDLRDWVDEHGS 1119
            FGFGF VA L+ FVY+ L+++P LV +LVW+C+LLVL  L GLGYGL+VT   WD  D  T   Y +  A   A+  WVL F+W CL CFL  RISLAIG+IKEA R++A+MP++VF+P ++LV  + F+A W+ YA YTASLGD TT +V        L+Y  + +  +++YRGWFLLFCLFWT  F+ A+GQ   IVIAM+V++WYF+R+K  VGS TV++   K+  FH GTAAFG LI+AI++MI A                                             TAIFSTNFCTSA  AF+LIARNI R+ AVT+L EF+L +M VF+ +      Y+AM   I   LNS++GP +M  +LA++   M   VYGMAI+T+LQCF+ADEE+F P  +FAE+DLR WVD+HG+
Sbjct:  171 FGFGFGVATLVAFVYIGLLQIPFLVAILVWSCVLLVLLCLLGLGYGLWVTAVDWD--DDGTKEDYIVTAAYVCAVVAWVLAFLWTCLFCFLAKRISLAIGVIKEAGRSIASMPIIVFWPVVELVASIAFVAIWMYYAAYTASLGDITTKTVESDTGGYDLSYKVYDFDQQVQYRGWFLLFCLFWTLNFVAAMGQATAIVIAMSVASWYFARHKSHVGSLTVVSSVGKTFAFHIGTAAFGGLIVAIVEMIRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVTILGEFVLNVMTVFVCIVTTLGVYVAMDSNIRSQLNSLVGPTIMTAVLAYYTGKMVTGVYGMAITTILQCFVADEELFPPTQQFAENDLRGWVDKHGA 591          
BLAST of mRNA_P-wetherbeei_contig5738.1.1 vs. uniprot
Match: A0A7S2XXR1_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXR1_9STRA)

HSP 1 Score: 317 bits (813), Expect = 5.090e-100
Identity = 191/409 (46.70%), Postives = 245/409 (59.90%), Query Frame = 1
Query:    1 FGFGFCVAILLGFVYVILMRLPGLVFLLVWACILLVLAGLGGLGYGLYVTYESWDSEDPSTHTSYQINGALGLAITCWVLCFIWFCLICFLRDRISLAIGIIKEASRAVAAMPLLVFFPFLQLVGLVCFLACWVVYAIYTASLGDYTTDSVTVNDVTLNYVSFSYSDEIEYRGWFLLFCLFWTSAFIIAVGQIVIAMAVSTWYFSRNKDDVGSGTVIACTFKSMFFHTGTAAFGSLIIAIIQMIE---------------------------------------------ATAIFSTNFCTSAAKAFWLIARNIGRIGAVTVLSEFILIIMEVFIMLAAGGLSYLAMSETIEDDLNSIIGPVVMVMILAFFVANMFMSVYGMAISTVLQCFIADEEMFAPGDRFAEHDL 1092
            FGFGF +AI++GF+Y   + LPG++   VW+ I+L+      LG  L V    W+ EDP     Y+I G   L      +  I+ CLI FLR RI LA+GIIKEA R++  MP ++FFP LQ+ GLV F+  WV + IYTAS+GD   +   +N V  NY  + YS E+E RGW+LLF  FWT+ FIIA+GQIV+A AV+ WYF+R+K +VG+ TV      S+F+H GTAAFGSL+IAII+MI                                               TAIFST+FC SA   F+L+ RNI R  AV ++SE I++I ++FI L A  LSY  M   I DDLNS++ P VMV ILA+ VA MFM V+ MAI TV QCFIADEEMF    RFA+HDL
Sbjct:  189 FGFGFVIAIVMGFLYTWFLHLPGVISTFVWSTIILIFLLKLALGAWLIVKGGEWEDEDPQMREDYEILGLKVLGGIVIAVAVIYACLIIFLRKRIQLAVGIIKEAGRSLMDMPAIIFFPLLQVFGLVLFMVPWVFFVIYTASMGD--IEVKQMNGV--NYKDYVYSAEVEERGWYLLFMWFWTTQFIIALGQIVLAAAVAKWYFTRDKKEVGTRTVFWAIKVSLFYHVGTAAFGSLVIAIIKMIRFILMQMQKQAQXXXXKLAQAVLCXXXXXXXCVEKCMKFVNRHAYIQTAIFSTSFCVSAKNGFFLLLRNIARASAVELVSEIIILIGKIFISLMATFLSYATMEAVISDDLNSLVAPTVMVFILAWVVAIMFMMVFHMAIDTVFQCFIADEEMFEGDQRFAQHDL 593          
BLAST of mRNA_P-wetherbeei_contig5738.1.1 vs. uniprot
Match: D8LIJ7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ7_ECTSI)

HSP 1 Score: 314 bits (805), Expect = 2.730e-98
Identity = 177/417 (42.45%), Postives = 252/417 (60.43%), Query Frame = 1
Query:    1 FGFGFCVAILLGFVYVILMRLPGLVFLLVWACILLVLAGLGGLGYGLYVTYESWDSEDPSTHTSYQINGALGLAITCWVLCFIWFCLICFLRDRISLAIGIIKEASRAVAAMPLLVFFPFLQLVGLVCFLACWVVYAIYTASLGDYTTDSVTVNDVTLNYVSFSYSDEIEYRGWFLLFCLFWTSAFIIAVGQIVIAMAVSTWYFSRNKDDVGSGTVIACTFKSMFFHTGTAAFGSLIIAIIQMIEA---------------------------------------------TAIFSTNFCTSAAKAFWLIARNIGRIGAVTVLSEFILIIMEVFIMLAAGGLSYLAMSETIEDDLNSIIGPVVMVMILAFFVANMFMSVYGMAISTVLQCFIADEEMFAPGDRFAEHDLRDWVDEHG 1116
            FGFGFC + +LGF Y+ +++LPGLV +++W  I  V   L  +G+G     E W+ +    HT  Q+ G+       +   F++ CLI FLR +I+LA GIIKE+ RA+  + ++ F P LQ   +V FL  WVVY++YTAS+ D TT+ V      L   SF YSDE+E RGW+LLF  FWT+ F++A+GQIV+A+ V  +YF+R+ + V +GT      + + FHTGTAAFGSLIIAII+ I A                                              AIFST+FC S+  AFWLIARN+GR+GAVTV+++F++ IM++ I L   G +Y+ +   ++DDL S +GPV    ++A++VA+ F ++ GM   T+LQCFIADEEMF   DR+A +DL+DW+D HG
Sbjct:  210 FGFGFCFSTILGFFYLGMLQLPGLVCMMIWGSIACVFFILVAMGFGFVSLSEDWEGD--GEHTDTQVMGSRVTGYLAYGCAFLFLCLIVFLRKQIALANGIIKESVRAIGTVKMMFFMPLLQCAAIVAFLVPWVVYSVYTASMADITTEEVA----GLTVKSFEYSDEVEKRGWYLLFVFFWTTQFVVAMGQIVVALTVVKYYFTRDVETVNNGTFWKSLKEGLRFHTGTAAFGSLIIAIIKTIRAMLTYMQKKLQKSGSKAAQAVLCCLSCFFWCLEKCVKFINKNAYIQVAIFSTSFCRSSKNAFWLIARNLGRVGAVTVVTDFVVFIMKLVIGLGTAGATYVFLQNFMKDDLYSPMGPVFFAGVMAYYVASSFAALLGMTTLTILQCFIADEEMFEGEDRYARNDLKDWLDAHG 620          
BLAST of mRNA_P-wetherbeei_contig5738.1.1 vs. uniprot
Match: A0A835Z6J7_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J7_9STRA)

HSP 1 Score: 312 bits (800), Expect = 1.210e-97
Identity = 175/417 (41.97%), Postives = 261/417 (62.59%), Query Frame = 1
Query:    4 GFGFCVAILLGFVYVILMRLPGLVFLLVWACILLVLAGLGGLGYGLYVTYESWDSEDPSTHTSYQINGALGLAITCWVLCFIWFCLICFLRDRISLAIGIIKEASRAVAAMPLLVFFPFLQLVGLVCFLACWVVYAIYTASLGDYTTDSVTVNDVTLNYVSFSYSDEIEYRGWFLLFCLFWTSAFIIAVGQIVIAMAVSTWYFSRNKDDVGSGTVIACTFKSMFFHTGTAAFGSLIIAIIQMIEA---------------------------------------------TAIFSTNFCTSAAKAFWLIARNIGRIGAVTVLSEFILIIMEVFIMLAAGGLSYLAMSETIEDDLNSIIGPVVMVMILAFFVANMFMSVYGMAISTVLQCFIADEEMFAPGDRFAEHDLRDWVDEHGS 1119
            GFGF  ++++GFVY +L+R+PG+V ++ W  IL V+A    +GYGLY   + W ++  + HT  QI  A    I  +VL  ++ CL  F+  RI LA  I+KEA+RA+  +P ++  P ++ VGLV F    V Y +Y AS+GD++T +V   +V     + +Y  E++  GW+LLFCLFWT+ FIIA+GQIV+A+AV  ++F+R+K  +GSGT        M++H GTAAFGSLIIAIIQMI A                                             TA+FST FC S  +AF+LIARNI R+GAV+++SEF++IIM++ I LA    +YL +  TI ++L+S +GP + V +LA+ VA++F  ++ M  +T+LQCFIADEEM++P +R+A++DL+D+V+ HG+
Sbjct:  200 GFGFGFSLVMGFVYCLLLRVPGVVAIMTWGSILAVIALFAAVGYGLYTKGDEWAADTTNQHTDVQITIARIFGIAGYVLAGLFACLALFMCRRIRLATSIMKEAARAIGKIPAMILMPVVEAVGLVLFFVPLVFYGVYVASMGDFSTTTVAGLEVK----TVTYGSEVQGMGWYLLFCLFWTTQFIIAMGQIVVALAVVKYFFTRDKSTLGSGTFFKAMKDGMWYHMGTAAFGSLIIAIIQMIRAIIAWFQKKAKASGNKIAQYALCCCQCCFWCLQKCMQFINKNAYIQTALFSTGFCKSGKEAFFLIARNIVRVGAVSMVSEFMIIIMKLVICLATMAATYLGLDATIGNELHSFVGPTIFVGVLAYLVASVFAELFSMTTATILQCFIADEEMYSPAERYADNDLKDFVNTHGA 612          
BLAST of mRNA_P-wetherbeei_contig5738.1.1 vs. uniprot
Match: W7TBK4_9STRA (Choline transporter-like protein n=6 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBK4_9STRA)

HSP 1 Score: 303 bits (775), Expect = 2.290e-93
Identity = 176/425 (41.41%), Postives = 255/425 (60.00%), Query Frame = 1
Query:    1 FGFGFCVAILLGFVYVILMRLPGLVFLLVWACILLVLAGLGGLGYGLYVTYESWDSEDPSTHTSYQINGALGLAITCWVLCFIWFCLICFLRDRISLAIGIIKEASRAVAAMPLLVFFPFLQLVGLVCFLACWVVYAIYTASLGDYTT---DSVTVNDVT-----LNYVSFSYSDEIEYRGWFLLFCLFWTSAFIIAVGQIVIAMAVSTWYFSRNKDDVGSGTVIACTFKSMFFHTGTAAFGSLIIAIIQMIEA---------------------------------------------TAIFSTNFCTSAAKAFWLIARNIGRIGAVTVLSEFILIIMEVFIMLAAGGLSYLAMSETIEDDLNSIIGPVVMVMILAFFVANMFMSVYGMAISTVLQCFIADEEMFAPGDRFAEHDLRDWVDEHG 1116
            FG GF  A++LGF++  L+R PGL+++ VW   +LV A LG LG  +Y+    W ++ P TH+  ++  A GL I   V+C +W C + FLR RI+LA+G+++EA+RAV  MPL+V +PFLQ  GLV FL  W  Y++  AS+G +         VN        +    F Y        W++LF L WT+ FIIAVGQI +A+AVSTWYF+R+K  +GSGT+      +  +H GTAAFGSL+IA+++ I +                                             TA+  T+FCTS   AF+LIARNI RIGAV+++SEF++II +VF+ + AG +S+  M+  +ED ++S IGP ++V+ILA+F A+MF  ++ MA+S +LQ FIADEEMF PG+R+A   L  ++DE+G
Sbjct:  228 FGIGFGAALILGFLWTWLLRTPGLIYVAVWTVNMLVWACLGALGAFMYLWANDWKNDVPRTHSDREVWVAKGLGIFFLVMCALWLCTLVFLRKRINLAVGLVREAARAVIDMPLIVLYPFLQAAGLVLFLVPWSFYSVNIASMGHFEPRLFQGTGVNPFAEAGPEVIVQRFQYGASGSDFAWYMLFVLLWTAQFIIAVGQITLALAVSTWYFTRDKGTIGSGTLCKAVGITGLYHLGTAAFGSLVIAVVEAIRSIIAYIQKILKRSENKVAQYLLCCCQCGFWCLEKILKFVNKNAYIQTAVNGTSFCTSGKMAFFLIARNIMRIGAVSLVSEFVIIIGKVFVSVTAGAISFYTMTFFLEDRIHSPIGPTILVVILAWFTADMFCQIFSMAVSALLQAFIADEEMFGPGERYASTALAVYIDENG 652          
BLAST of mRNA_P-wetherbeei_contig5738.1.1 vs. uniprot
Match: A0A835Z9G9_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G9_9STRA)

HSP 1 Score: 293 bits (749), Expect = 2.370e-90
Identity = 174/395 (44.05%), Postives = 241/395 (61.01%), Query Frame = 1
Query:   28 LLGFVYVILMRLPGLVFLLVWACILLVLAGLGGLGYGLYVTYESWDSE-DPSTHTSYQINGALGLAITCWVLCFIWFCLICFLRDRISLAIGIIKEASRAVAAMPLLVFFPFLQLVGLVCFLACWVVYAIYTASLGDYTTDSVTVNDVTLNYVSFSYSDEIEYRGWFLLFCLFWTSAFIIAVGQIVIAMAVSTWYFSRNKDDVGSGTVIACTFKSMFFHTGTAAFGSLIIAIIQMIEA---------------------------------------------TAIFSTNFCTSAAKAFWLIARNIGRIGAVTVLSEFILIIMEVFIMLAAGGLSYLAMSETIEDDLNSIIGPVVMVMILAFFVANMFMSVYGMAISTVLQCFIADEEMFAPGDR 1074
            LL F+Y+ LMR+P L+FLLVWAC L +LA   G G  L  T ++WD E +P TH+  +    L  +   + L  +W  L+ +LR RI+ AI + KEA+RAV +MPLL+FFP +Q +GL+ FL  W +Y +Y AS G  T    T +  T+   +FSYSD   Y G +L+FC FWTS +I+A+GQIV+AM+V+TWYF+R K  +GS TV+     ++++H GTAAFGSL+IAII+ I                                               TAIF  +FC +A KAF+LIARNI R+ AV ++SE + I+  + + LA+    YLA  E + D ++ +IGP ++V I+AF VA+MF  V+GMAIST+LQCFIADEEMF PG+R
Sbjct:  227 LLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFALGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFFPIIQTLGLLIFLVPWAIYVVYLASSGTITPVE-TPSGATVK--AFSYSDNDRYAGLYLIFCYFWTSEYILALGQIVVAMSVATWYFTREKGSIGSRTVLRSIGSTLYYHAGTAAFGSLVIAIIKTIRTVIAYLQKKAKDSHNKLLSALLCCXXXXXXXXEKCMKFLNKNAYIQTAIFGYSFCKAARKAFFLIARNILRVAAVGMVSELVAILGLILVPLASALAYYLAAQELMADKMHGLIGPTIIVGIIAFIVAHMFTQVFGMAISTILQCFIADEEMFEPGER 618          
BLAST of mRNA_P-wetherbeei_contig5738.1.1 vs. uniprot
Match: A0A6V1T854_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T854_HETAK)

HSP 1 Score: 281 bits (720), Expect = 3.100e-86
Identity = 165/416 (39.66%), Postives = 246/416 (59.13%), Query Frame = 1
Query:    4 GFGFCVAILLGFVYVILMRLPGLVFLLVWACILLVLAGLGGLGYGLYVTYESWDSEDPSTHTSYQINGALGLAITCWVLCFIWFCLICFLRDRISLAIGIIKEASRAVAAMPLLVFFPFLQLVGLVCFLACWVVYAIYTASLGDYTTDSVTVNDVTLNYVSFSYSDEIEYRGWFLLFCLFWTSAFIIAVGQIVIAMAVSTWYFSRNKDDVGSGTVIACTFKSMFFHTGTAAFGSLIIAIIQMIEA---------------------------------------------TAIFSTNFCTSAAKAFWLIARNIGRIGAVTVLSEFILIIMEVFIMLAAGGLSYLAMSETIEDDLNSIIGPVVMVMILAFFVANMFMSVYGMAISTVLQCFIADEEMFAPGDRFAEHDLRDWVDEHG 1116
            GFG  +A +LGF+Y+ L+R+P ++ +LVW  IL++ A L GLGY +Y   ++W +ED  TH+S  I    G A    VL  +W C ICFLR +I LA  I++EA+R V AMP +  +P LQ    + F+A + VY +Y AS G  TT     +D    + +F ++ E +Y+  FL+F LFWT+ FI+AVGQI +A+A++ WYF  +K ++G+GT +   F++ +FH GTAAFGSLI+A+I  I A                                             TA+ ST FC S  ++F L+ARN+ R+GAVTV+++ +L+IM+ FI+L     +Y  +      +LNS++ P+V+V +LA+ VA  F  ++GM+I T+L CF+ DEE F  G RFAEH L DW+++ G
Sbjct:  180 GFGIGMAAVLGFIYLYLVRIPWIMNILVWGSILVIQAALAGLGYLMYAQAQTW-TED-GTHSSNAIYALYGCACIFGVLAVLWLCAICFLRKQIELAEDIVEEAARPVTAMPAMFLWPLLQTAATLVFVAFFFVYLMYEASTGMTTT----TDDEGYEHRAFDFTTEQKYKMLFLVFELFWTTQFIVAVGQIALALAIAQWYFVHDKSEIGTGTFVVAVFEASWFHMGTAAFGSLILAVILSIRAFLAYCEKKAKASHNKVAEAVICACQCCFWCLEKCVRFVNKNAYIETAVRSTGFCASCVESFKLVARNVLRLGAVTVIADAVLLIMQAFIVLVTVFGAYEYLDYKYASELNSVVAPLVLVAVLAWAVATQFKEIFGMSILTILHCFVVDEETFPAGKRFAEHALADWLNKFG 589          
BLAST of mRNA_P-wetherbeei_contig5738.1.1 vs. uniprot
Match: A0A7S3Y650_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y650_HETAK)

HSP 1 Score: 282 bits (722), Expect = 6.480e-86
Identity = 171/408 (41.91%), Postives = 240/408 (58.82%), Query Frame = 1
Query:    4 GFGFCVAILLGFVYVILMRLPGLVFLLVWACILLVLAGLGGLGYGLYVTYESWDSEDPSTHTSYQINGALGLAITCWVLCFIWFCLICFLRDRISLAIGIIKEASRAVAAMPLLVFFPFLQLVGLVCFLACWVVYAIYTASLGDYTTDSVTVNDVTLNYVSFSYSDEIEYRGWFLLFCLFWTSAFIIAVGQIVIAMAVSTWYFSRNKDDVGSGTVIACTFKSMFFHTGTAAFGSLIIAIIQMIEA---------------------------------------------TAIFSTNFCTSAAKAFWLIARNIGRIGAVTVLSEFILIIMEVFIMLAAGGLSYLAMSETIEDDLNSIIGPVVMVMILAFFVANMFMSVYGMAISTVLQCFIADEEMFAPGDRFAEHDL 1092
            GFG  VA+++GF+Y+  +R+PG++F+L W  I  +   L       Y T  SW SE P  H+  +  G L  +   +V+  +W  LI  LR RI LA+ I K+ASRAVAAM LL+ +P +Q +G++ FL  W +YA+Y AS G+ T DS      T    +F+Y D I Y G +LLFC FWTS FIIA+GQ+V+AMA+S WYF+ ++  +G+GTV+    +SM++H GTAAFGSLIIAII+ I A                                             TAIF  +FC++A  AF+LIARNI RI AV+++ +F+L++ ++ I +    L+YL ++    D L+ +  P V V +LA+FVA MF+ V+GMAIST LQCF+ADEEM   G  F   DL
Sbjct:  227 GFGVGVAMVVGFIYLFFLRIPGVLFMLTWGIIGAITLVLLLAAVLCYTTATSWASESPQIHSDTEAKGLLYFSYALFVVFGLWLLLILVLRKRIQLALRITKQASRAVAAMKLLMVWPVIQTLGVLVFLIPWTIYALYLASSGEVTVDS------TGTIKTFTYDDNIRYAGLYLLFCWFWTSQFIIAMGQVVVAMAISFWYFTLDRSKIGNGTVLKAIRQSMWYHMGTAAFGSLIIAIIKTIRAIIAYLQKKAKKSGNKILQAVLCXXXXXXXXXXKCMKFLNKNAYIQTAIFGKSFCSAAKAAFFLIARNILRIAAVSMVGDFVLLLGKILIPVGTTFLAYLVLAYAYSDSLHGLYTPCVFVFLLAYFVALMFVEVFGMAISTCLQCFVADEEM---GGHFTNQDL 625          
BLAST of mRNA_P-wetherbeei_contig5738.1.1 vs. uniprot
Match: A0A7S1VN07_9STRA (Choline transporter-like protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VN07_9STRA)

HSP 1 Score: 281 bits (719), Expect = 2.300e-85
Identity = 160/416 (38.46%), Postives = 245/416 (58.89%), Query Frame = 1
Query:    4 GFGFCVAILLGFVYVILMRLPGLVFLLVWACILLVLAGLGGLGYGLYVTYESWDSEDPSTHTSYQINGALGLAITCWVLCFIWFCLICFLRDRISLAIGIIKEASRAVAAMPLLVFFPFLQLVGLVCFLACWVVYAIYTASLGDYTTDSVTV-NDVTLNYVSFSYSDEIEYRGWFLLFCLFWTSAFIIAVGQIVIAMAVSTWYFSRNKDDVGSGTVIACTFKSMFFHTGTAAFGSLIIAIIQMIEA---------------------------------------------TAIFSTNFCTSAAKAFWLIARNIGRIGAVTVLSEFILIIMEVFIMLAAGGLSYLAMSETIEDDLNSIIGPVVMVMILAFFVANMFMSVYGMAISTVLQCFIADEEMFAPGDRFAEHDLRDWVDEH 1113
            GFGF +++ + F YV+L+RLPGL+ +++W  +L+        G   Y   + W  +DP T+    I+  L  +   + +  +   L+C LR  I LAIG +K+A RA+A MPL+V  P LQ +GL+ F+  + VYA+Y ASLG  T  +  V  D+ +   ++ + + +E  GW+LLFCLFWT  FI+AVG +V++MAV+ WYF+ NK +  S  VI+  F + F+H GT A+GSLI+AI+Q++ A                                             TAIF T+FCTSA +AF+LI RN GRIGA++ +S  +L + ++FI      LSY  + E + ++L S+ GPVV+V I+++F+++MFM ++ M IST+LQCF+ADEEMF     +AE +L+ W+D +
Sbjct:  254 GFGFGLSLFVSFCYVMLLRLPGLLNMVIWTSLLIANTMFFVAGAYAYRHSKMWAEQDPPTYDQRAIDVTLYGSYASFGVGVLLLLLLCCLRRHIQLAIGCVKQAGRAIARMPLIVLVPILQAIGLIAFMCVFTVYAVYLASLGHVTVKNFPVPGDIDMAVRTYEFDEFVERCGWYLLFCLFWTGNFIVAVGDMVVSMAVAKWYFTHNKREASSVYVISSVFDTCFYHLGTCAYGSLILAIVQLMRAILARIQKQAKKANSKVADCLLCCXXXXXXCFEKCIKFLNKNAYIQTAIFGTSFCTSAREAFFLILRNAGRIGAISYVSGLVLFVGKLFISSVTTILSYFVIVEYVGEELYSVAGPVVVVFIISYFISDMFMDIFDMGISTILQCFVADEEMFDGDTCYAEGELQKWIDNY 669          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5738.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRZ5_ECTSI9.420e-13153.87Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5JW76_9PHAE1.880e-12348.94Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A7S2XXR1_9STRA5.090e-10046.70Choline transporter-like protein n=1 Tax=Fibrocaps... [more]
D8LIJ7_ECTSI2.730e-9842.45Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A835Z6J7_9STRA1.210e-9741.97Choline transporter-like protein n=1 Tax=Tribonema... [more]
W7TBK4_9STRA2.290e-9341.41Choline transporter-like protein n=6 Tax=Monodopsi... [more]
A0A835Z9G9_9STRA2.370e-9044.05Choline transporter-like protein n=1 Tax=Tribonema... [more]
A0A6V1T854_HETAK3.100e-8639.66Choline transporter-like protein n=1 Tax=Heterosig... [more]
A0A7S3Y650_HETAK6.480e-8641.91Choline transporter-like protein n=1 Tax=Heterosig... [more]
A0A7S1VN07_9STRA2.300e-8538.46Choline transporter-like protein n=2 Tax=Grammatop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5738contigP-wetherbeei_contig5738:820..3725 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FRZ5
PFAMsCholine_transpo
Model size1119
Max annot lvl2759|Eukaryota
KEGG koko:K06515,ko:K15377
KEGG TC2.A.92.1,2.A.92.1.1
KEGG Pathwayko05231,map05231
Hectar predicted targeting categorysignal anchor
Exons5
Evalue1.54e-131
EggNOG OGsKOG1362@1|root,KOG1362@2759|Eukaryota
Ec32 ortholog descriptionCholine transporter-like
Ec32 orthologEc-12_007060.1
Descriptioncholine transmembrane transporter activity
Cds size1119
COG categoryH
BRITEko00000,ko00001,ko02000,ko04090,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186851.0710166-CDS-P-wetherbeei_contig5738:819..8881683186851.0710166-CDS-P-wetherbeei_contig5738:819..888Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5738 820..888 -
1683186851.0825887-CDS-P-wetherbeei_contig5738:1327..16391683186851.0825887-CDS-P-wetherbeei_contig5738:1327..1639Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5738 1328..1639 -
1683186851.093425-CDS-P-wetherbeei_contig5738:2322..24701683186851.093425-CDS-P-wetherbeei_contig5738:2322..2470Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5738 2323..2470 -
1683186851.103664-CDS-P-wetherbeei_contig5738:2768..32021683186851.103664-CDS-P-wetherbeei_contig5738:2768..3202Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5738 2769..3202 -
1683186851.114731-CDS-P-wetherbeei_contig5738:3569..37251683186851.114731-CDS-P-wetherbeei_contig5738:3569..3725Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5738 3570..3725 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5738.1.1prot_P-wetherbeei_contig5738.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5738 820..3725 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5738.1.1

>prot_P-wetherbeei_contig5738.1.1 ID=prot_P-wetherbeei_contig5738.1.1|Name=mRNA_P-wetherbeei_contig5738.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=373bp
FGFGFCVAILLGFVYVILMRLPGLVFLLVWACILLVLAGLGGLGYGLYVT
YESWDSEDPSTHTSYQINGALGLAITCWVLCFIWFCLICFLRDRISLAIG
IIKEASRAVAAMPLLVFFPFLQLVGLVCFLACWVVYAIYTASLGDYTTDS
VTVNDVTLNYVSFSYSDEIEYRGWFLLFCLFWTSAFIIAVGQIVIAMAVS
TWYFSRNKDDVGSGTVIACTFKSMFFHTGTAAFGSLIIAIIQMIEATAIF
STNFCTSAAKAFWLIARNIGRIGAVTVLSEFILIIMEVFIMLAAGGLSYL
AMSETIEDDLNSIIGPVVMVMILAFFVANMFMSVYGMAISTVLQCFIADE
EMFAPGDRFAEHDLRDWVDEHGS
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mRNA from alignment at P-wetherbeei_contig5738:820..3725-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5738.1.1 ID=mRNA_P-wetherbeei_contig5738.1.1|Name=mRNA_P-wetherbeei_contig5738.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2906bp|location=Sequence derived from alignment at P-wetherbeei_contig5738:820..3725- (Phaeothamnion wetherbeei SAG_119_79)
TTTGGCTTCGGCTTCTGCGTCGCTATTTTGCTTGGCTTCGTTTACGTGAT TTTGATGCGGCTGCCTGGGCTGGTGTTTCTGCTGGTGTGGGCATGCATCC TGCTGGTGCTGGCGGGGCTCGGTGGGCTTGGCTATGGCCTCTACGTCACC TACGAGGTGCGCGAAAAGTTGCGAGGAGTTTATTGCCTGCTTTGGCTTTC TGTGCCTTGGTGGTCTCCCTGTCTTCATTTATTGGGAGGACGTGTGTCTT TGCTTTTTAATGGCCTCTTTGTGCGCTTCTATTCTTTGCTTTTGGCCCAA CGACGAGCTGCCTGCGGGGTGGACGCGCCCTCTCGCATCCATCCTGCGCC CCCATGCGCTGCAGCAAGAACCATGCTGCTGCTTTGATGGTCTGCGTTGA GACGCGGTGGCTCTGTAATAACGTTCATATCGCCACCACCGGCCGCCGTC TGCTGCCGCCTCCGCCGCCGCCCGCTGCTGACTTTTCCCTCTCCGACCGA CGCCTGACTATGCACCTTGACAGTCGTGGGACTCGGAGGACCCGTCGACG CACACGTCGTACCAAATCAACGGCGCTCTGGGGCTAGCCATCACCTGCTG GGTGCTGTGCTTCATCTGGTTCTGCCTCATCTGCTTCCTGCGGGACCGCA TCTCGCTCGCCATCGGCATCATCAAGGAGGCGTCCCGCGCCGTCGCCGCC ATGCCGCTCCTCGTCTTCTTCCCGTTCCTGCAGCTAGTCGGCCTCGTGTG CTTCCTGGCCTGCTGGGTAGTCTACGCGATCTACACGGCATCGCTCGGCG ACTACACAACGGATTCCGTGACCGTCAACGATGTGACGCTCAATTACGTC AGCTTTTCGTACTCGGACGAGATTGAGTATCGCGGCTGGTTCCTGCTCTT CTGCCTCTTTTGGACGTCCGCTTTCATCATCGCCGTCGGCCAGATCGTCA TCGCTATGTGAGAGAAGAGGAGAGGACGGATGTCTGTGGGGAGAAGAGGA GAGAGACGAAACGTTTTCGAAGAATTGTGACCGCTGCTGCACTTTCGGTG CCATTCGGCATCCTTTCTTGCGATTCGCCGTGGCTTTTGGGTTGCTGTGC GCTGACTCGCCGTTGCTGTGCCGCCGCCGCTGCTGCCGCCACCACGCTCG CCGCCTGCCGCCGCCGCTCATCGCTACTGCCGCACTGGCGTACTTGGCAA CCAATCGATAACAAAACAATCGACGGACAATCGATCGACTGCAATCGAAC ACCAGGGCGGTGTCGACGTGGTATTTCTCGCGCAATAAGGACGACGTGGG GAGTGGGACGGTGATCGCGTGCACCTTCAAGAGCATGTTCTTCCACACGG GGACGGCGGCCTTCGGCAGTTTGATCATCGCCATTATCCAGATGATCGAG GCTGTCCTTTCCTACCTCAAGGCCAAGGCCCAGGCCACCGGCAATAAGGT CAGCGGGCGAAGGATAGATTAGGAAAAAGCTGACGAGTGGTGCGCAGAGG AGGGAGAGAGTGTTGGTTTGCTTTTGACGGTTTTCGTATAGGCAAAAGGA TGATGAGCGAGCAAAGTTCCTGAGTAATAGGGCTCTCCCATATTGCTGGT TCTCCGTCGCAGCAGGTGCCGCCGCGGCTGCCGCAGCTGCCGCGTTTGTC CTCATTGTAGTTTGATCCCACCTGAAGGCGTGCCGGCTTCGCTCCCCTTC CATTGCCCTTCACTCGATTAACCTGGCTTGTTGCTCACGCTTATTCCAAT CAAACCCGCTGTCGACTGGTGCAGATTGCCGAGATGGTGCTGTGCTGCTG CATCTGCTGCTTCTGGTGCCTCGAGAAGTGCATGCGATTCATCAACAAGG TAAGAAAGAGGACTCCCGACTGGCCGATGTGACTGCCGTGTGAGGAGCGC TGCTGCGTGATGGCAGTGGAATATGGGCGTTGGCCGTCGGAGCGCTGGTT GTTGGGGTGCAGACTGCCGAAAATATTTGCGTAAACTGGAAGGTGTCTGG TCGCTGATGTTTGCGCCCCCGCTGCCGCTACCCCACCGCCTGCATTACTC GCCCGATTTCCCGCATTGCAGAACGCGTACATCCAGACGGCCATCTTCTC GACCAACTTCTGCACGTCGGCCGCCAAGGCCTTCTGGCTCATCGCCCGCA ACATCGGCCGCATCGGCGCCGTCACGGTGCTGTCCGAGTTCATCCTCATC ATCATGGAGGTCTTCATCATGTTGGCGGCCGGCGGCTTATCGTACCTGGC CATGAGTGAGACCATCGAGGATGACCTGAACAGCATCATCGGGCCTGTGG TGATGGTCATGATCCTGGCTTTCTTCGTGGCCAACATGTTCATGTCCGTC TACGGCATGGCAATCTCCACTGTTCTCCAGTGCTTCATCGCCGACGAGGT CAGTCGATCAGTCTTACTCCGTCTGTTCAGCTCAGTAACTCTGGGCCGGT ACGGCGCGAATCAGTTGGTGGGTCGGGCCTGTGCAGGCGCAGCAAAACCG GGGAATATTACGAGGGGGTTTCTGAGAGAAGATGAAGCAAAAGAGGCGGA AACGGCTGGCTTATCTTCAACCTGCCATTTTCTTCGCGCAACTGACTCGC CTCGGGTAGACAAGGCCAGGTGGTGCGGCAACGACCCGCGCATCATGTTT CTTGGCTTTTAACAAGTCCCTCCGGCATCCTGAGGAAAAAAGAATGCCCT GCTGGCAGCTGCCTTCTTCCTCTCCTTCTTTCTTCTCATCCTTCCGACCT TGTCAAAAAAGATACCGCTTGCCGTTCATTCCGTTTCTGTGCCGTTCCTT CTGTCGCTGTTTTGCGCAATCTGGGCAATCTGAGCAGGAGATGTTTGCGC CGGGCGACCGGTTCGCCGAGCACGACCTGCGGGACTGGGTCGACGAGCAC GGCAGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5738:820..3725-

>mRNA_P-wetherbeei_contig5738.1.1 ID=mRNA_P-wetherbeei_contig5738.1.1|Name=mRNA_P-wetherbeei_contig5738.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1119bp|location=Sequence derived from alignment at P-wetherbeei_contig5738:820..3725- (Phaeothamnion wetherbeei SAG_119_79)
TTTGGCTTCGGCTTCTGCGTCGCTATTTTGCTTGGCTTCGTTTACGTGAT
TTTGATGCGGCTGCCTGGGCTGGTGTTTCTGCTGGTGTGGGCATGCATCC
TGCTGGTGCTGGCGGGGCTCGGTGGGCTTGGCTATGGCCTCTACGTCACC
TACGAGTCGTGGGACTCGGAGGACCCGTCGACGCACACGTCGTACCAAAT
CAACGGCGCTCTGGGGCTAGCCATCACCTGCTGGGTGCTGTGCTTCATCT
GGTTCTGCCTCATCTGCTTCCTGCGGGACCGCATCTCGCTCGCCATCGGC
ATCATCAAGGAGGCGTCCCGCGCCGTCGCCGCCATGCCGCTCCTCGTCTT
CTTCCCGTTCCTGCAGCTAGTCGGCCTCGTGTGCTTCCTGGCCTGCTGGG
TAGTCTACGCGATCTACACGGCATCGCTCGGCGACTACACAACGGATTCC
GTGACCGTCAACGATGTGACGCTCAATTACGTCAGCTTTTCGTACTCGGA
CGAGATTGAGTATCGCGGCTGGTTCCTGCTCTTCTGCCTCTTTTGGACGT
CCGCTTTCATCATCGCCGTCGGCCAGATCGTCATCGCTATGGCGGTGTCG
ACGTGGTATTTCTCGCGCAATAAGGACGACGTGGGGAGTGGGACGGTGAT
CGCGTGCACCTTCAAGAGCATGTTCTTCCACACGGGGACGGCGGCCTTCG
GCAGTTTGATCATCGCCATTATCCAGATGATCGAGGCTACGGCCATCTTC
TCGACCAACTTCTGCACGTCGGCCGCCAAGGCCTTCTGGCTCATCGCCCG
CAACATCGGCCGCATCGGCGCCGTCACGGTGCTGTCCGAGTTCATCCTCA
TCATCATGGAGGTCTTCATCATGTTGGCGGCCGGCGGCTTATCGTACCTG
GCCATGAGTGAGACCATCGAGGATGACCTGAACAGCATCATCGGGCCTGT
GGTGATGGTCATGATCCTGGCTTTCTTCGTGGCCAACATGTTCATGTCCG
TCTACGGCATGGCAATCTCCACTGTTCTCCAGTGCTTCATCGCCGACGAG
GAGATGTTTGCGCCGGGCGACCGGTTCGCCGAGCACGACCTGCGGGACTG
GGTCGACGAGCACGGCAGC
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