mRNA_P-wetherbeei_contig5737.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5737.1.1 vs. uniprot
Match: D7FMA5_ECTSI (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA5_ECTSI) HSP 1 Score: 251 bits (641), Expect = 1.310e-71 Identity = 155/396 (39.14%), Postives = 206/396 (52.02%), Query Frame = 1
Query: 1 IALLFEAIPYYGHGDNPADERVRRVLRSLSPEDVAARDAYGNTILLLVCQYSCADLVPLVLSGAAVAGEPTQAGVNATNTAGACALHFPCYKDSLNPDTARLLVDAGATADVCEKSYGCTPLHYAAGAGNVALCRLLVGAGARPETCDFYNYTAVDYARQAEAPDCVQYLEATA----------------------------------------------RQENKATTSAGDG------------RDGGSSGGGDAAPGFWQRLVDPTSGLAYHINDRTGESMWERELQDKVRALGNARLATAAMSRGNSGAGSLSSKGMIVAAGDS--ADGAWQWMRQHVFEARLVALLGRHDPLRLVEVQDLLRESNGREEALLARLRSAYGVEKEEPAMAALV 1008
+ LL E IPY G GD D VR +L + E++ RD YGNT+L+L CQY C LVPL+L+ A + V+A N+ GACALHF CYKDS+ TA LL++ GA +V EK+YGCTPLHYAAGAG+V LC+ L+ GA+ T D Y YTAVDYA+Q+ A DCV YLE + R + AT++ G +G +GG D GFW R DP SG+AY++N++TGESMWE++L + +AL AGD + QW+RQ +ARL+A LGRHDPL+L++V D+L+ G EE L L + Y + E+P + ALV
Sbjct: 117 LKLLVEFIPYVGLGDATRDNMVRSILSAADAEELVGRDDYGNTLLILACQYRCKALVPLILARGGGAID-----VDAVNSEGACALHFACYKDSVCAQTAVLLLERGAEPEVVEKTYGCTPLHYAAGAGDVNLCKRLIEKGAKANTWDLYQYTAVDYAKQSGATDCVDYLEEVSAPGASSTATIKFSTGRGGIVTSSGVEASSTGFVREDSFDTEDGDDFRPQGNATSAIATGWLGMVGRQPSAFHEGFETGGEDDGEGFWGRQCDPDSGMAYYLNEKTGESMWEKDLLAQAQALRKE-------------------------AGDENPSPHLQQWLRQQTHKARLIAFLGRHDPLKLMQVDDMLKRRLGDEETLFNELANQYSAQ-EDPTVTALV 481
BLAST of mRNA_P-wetherbeei_contig5737.1.1 vs. uniprot
Match: A0A482SRH0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRH0_9ARCH) HSP 1 Score: 218 bits (556), Expect = 1.010e-61 Identity = 132/346 (38.15%), Postives = 191/346 (55.20%), Query Frame = 1
Query: 1 IALLFEAIPYYGHGDNPADERVRRVLRSLSPEDVAARDAYGNTILLLVCQYSCADLVPLVLSGAAVAGEPTQAGVNATNTAGACALHFPCYKDSLNPDTARLLVDAGATADVCEKSYGCTPLHYAAGAGNVALCRLLVGAGARPETCDFYNYTAVDYARQAEAPDCVQYLEA----TARQENKATTSAGDGRDGGSSGGGDAA---PGFWQRLVDPTSGLAYHINDRTGESMWERELQDKVRALGNARLATAAMSRGNSGAGSLSSKGMIVAAGDSADGAWQWMRQHVFEARLVALLGRHDPLRLVEVQDLLRESNGREEALLARLRSAYGVEKEEPAMAALVAKL 1017
+ +L + IP+YG GD D VR L SLS ED+ A+D YGNT+LLL CQY C DL ++++ A NA NTAGA LHF CY+DS + A++L+ GA DV E +YGCTPLHY AG+G++ C+L++ GA+ D+YNYT VDYAR+A DC +L+ TA + N++T + G + S + + +W+ VDP SG Y+I+ ++GE +WE EL++++ A + LS K D + + EARL+A L +HDP RLV++ L+ + G+E+ LL L Y V+ E+P A KL
Sbjct: 104 VDVLLQFIPFYGQGDPANDSIVRSALSSLSIEDIDAKDEYGNTLLLLACQYRCEDLARIMINKGA--------NPNAVNTAGASCLHFACYQDSSSLPIAKVLLQNGANPDVAESNYGCTPLHYCAGSGDLEFCKLILQYGAQINAYDYYNYTCVDYAREAGFHDCANFLQKKLDKTAVKFNQSTKTGGALKATQSFRNNETSYEDMSYWESHVDPDSGGKYYIHTKSGECLWEAELKERINAYSKQQNFREGXXXXXXXXNLLSMKFSSPLPADKPKISEAALISQATEARLIAFLSKHDPARLVDISSLIEKYKGKEQELLNDLCKQYKVQ-EDPEFKAFQDKL 440
BLAST of mRNA_P-wetherbeei_contig5737.1.1 vs. uniprot
Match: D7FPK2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK2_ECTSI) HSP 1 Score: 198 bits (503), Expect = 4.590e-53 Identity = 126/336 (37.50%), Postives = 181/336 (53.87%), Query Frame = 1
Query: 1 IALLFEAIPYYGHGDNPADERVRRVLRSLSPEDVAARDAYGNTILLLVCQYSCADLV-PLVLSGAAVAGEPTQAGVNATNTAGACALHFPCYKDSLNPDTARLLVDAGATADVCEKSYGCTPLHYAAGAGNVALCRLLVGAGARPETCDFYNYTAVDYARQAEAPDCVQYLEATARQEN-----KATTSAGDGRDGGSSGGGDAAPGFWQRLVDPTSGLAYHINDRTGESMWERELQDKVRALGNARLATAAMSRGN---SGAGSLSSKGMIVAAGDSADGAWQWMRQHVFEARLVALLGRHDPLRLVEVQDLLRESNGREEALLARLRSAYGVEK 981
+ LF +P+YG D P D+ V+ L S+ P+ + R+ G+T+L+L CQ+ C DLV P++ GA PT A N G CALH+ C+ DSL+ D A L+ GA E +YGCTPLHYAA +G+ +C LLV GA+P+T D+YNYTAV YA+ A V+ E +A T G +G +SG G W R +DP + LAY++ND TGES WE +LQ A+ LAT + G+ S G++S+ + G +W+ Q + LVA+ R DPL+L+EV ++ + +L L YG++K
Sbjct: 62 MRTLFGLVPFYGGDDGPMDQMVKATLASVRPDAIDVRNEAGDTLLILACQHGCEDLVEPILAKGA----NPT-----AVNAVGICALHYTCFADSLSYDAAEALLWRGAETSTAETTYGCTPLHYAASSGDAEICALLVEHGAQPKTQDYYNYTAVKYAKDAGHEHVVELFGGEEEGEGWEEVEEAYTGMDTGDEGEASG---PTGGLWIRHIDPQTELAYYMNDETGESWWETDLQ----AVAKEFLATVPATAGSVNGSKTGAVSASITLPPLG-----VREWLVQEQVRSWLVAIFSRADPLKLMEVDLAMQIGKADFKEMLQALMIRYGIKK 376
BLAST of mRNA_P-wetherbeei_contig5737.1.1 vs. uniprot
Match: A0A7S3HTU3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTU3_9STRA) HSP 1 Score: 189 bits (481), Expect = 3.360e-50 Identity = 124/325 (38.15%), Postives = 176/325 (54.15%), Query Frame = 1
Query: 76 LRSLSPEDVAARDAYGNTILLLVCQYSCADLVPLVLSGAAVAGEPTQAGVNATNTAGACALHFPCYKDSLNPDTARLLVDAGATADVCEKSYGCTPLHYAAGAGNVALCRLLVGAGARPETCDFYNYTAVDYARQAEAPDCVQYLEATARQENKATTSAGD-------GRDGGSSGGGDAAPGFWQRLVDPTSGLAYHINDRTGESMWERELQDKVRALGNARLATAAMSRGNSGAGSLSSKGMIVAAGDSADGAWQWMRQHVF----EARLVALLGRHDPLRLVEVQDLLRESNGREEALLARLRSAYGVEKEEPAMAALVAKL 1017
L +LS ED+ ++D YGNT+LLL CQY C DLV ++L+ A A NA N++GAC LHF CY++S + A++L+ +GA DV E ++GCTPLHY AG G++ C+LL+ GA+ D+YNYT VDYA +A + +L+ KAT + G+S D A W+ +DP SG Y+I+ +TGE +WE EL+ +++ ++ A N AG + AA ++ D A + + +ARLV HDP RLVEV L E +GRE LL L Y V+ P + A AKL
Sbjct: 2 LSALSVEDIDSQDEYGNTLLLLACQYRCEDLVRIMLNKGADA--------NAVNSSGACCLHFACYRESASIGVAKILLKSGADPDVAESTFGCTPLHYCAGTGDIEFCKLLLSYGAQIGALDYYNYTCVDYASEAGMTEVAAFLQKKLSAATKATMGQSSKNLMSPSSKPYGNSNTIDIAN--WESHIDPDSGGKYYIHMKTGECLWESELKQRIQQY---QVQVGASRDENDRAGKNDDGIRVRAASETPDKAPKISEADLIRQATQARLVVFFTTHDPSRLVEVDKLTAEYSGREAQLLKELCEKYKVDGG-PELVAFQAKL 312
BLAST of mRNA_P-wetherbeei_contig5737.1.1 vs. uniprot
Match: A0A6H5L077_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L077_9PHAE) HSP 1 Score: 178 bits (451), Expect = 3.890e-46 Identity = 126/339 (37.17%), Postives = 171/339 (50.44%), Query Frame = 1
Query: 1 IALLFEAIPYYGHGDNPADERVRRVLRSLSPEDVAARDAYGNTILLLVCQYSC--------------ADLVPLVLSGAAVAG----------EPTQA-GVNAT--NTAGACALHFPCYKDSLNPDTARLLVDAGATADVCEKSYGCTPLHYAAGAGNVALCRLLVGAGARPE----TCDFYNYTAVDYARQAEAPDCVQYLEATARQEN-----KATTSAGDGRDGGSSGGGDAAPGFWQRLVDPTSGLAYHINDRTGESMWERELQDKVRALGNARLATAAMSRGNSGAGSLSSKGMIVAAGDSAD--GAWQWMRQHVFEARLVALLGRHDPLRLVEV 903
+ LF +P+YG D P D+ V+ L S+ P+ + R+ G+T+L+L CQ+ C A L + S G EP A G N T N G CALH+ C+ DSL+ D A L+ GA E +YGCTPLHYAA +G+ +C LLV GA+P+ T D+YNYTAV YA+ A V+ L E +A T G G +G +SG G W R +DP + LAY++ND TGES WE +LQ A+ LAT + G G SK V+A + G +W+ Q + LVA+ R DPL+L+EV
Sbjct: 12 MRTLFGLVPFYGGDDGPMDQMVKATLASVRPDAIDVRNEAGDTLLILACQHGCEVRLVETYRLRQPHAGLKTTLCSSVLECGFHKFQALDLVEPILAKGANPTAVNAVGICALHYTCFADSLSYDAAEALLWKGAETSTAETTYGCTPLHYAASSGDAEICALLVEHGAQPKASNATQDYYNYTAVKYAKDAGHEHVVELLGGEEEGEGWEEVEEAYTGMGTGEEGEASG---PTGGLWIRHIDPQTELAYYMNDETGESWWETDLQ----AVAKEFLATVPATAG----GVNGSKTGAVSASITLPPLGVREWLVQEQVRSWLVAIFSRADPLKLMEV 339
BLAST of mRNA_P-wetherbeei_contig5737.1.1 vs. uniprot
Match: A0A835YY32_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY32_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.100e-44 Identity = 81/158 (51.27%), Postives = 105/158 (66.46%), Query Frame = 1
Query: 10 LFEAIPYYGHGDNPADERVRRVLRSLSPEDVAARDAYGNTILLLVCQYSCADLVPLVLSGAAVAGEPTQAGVNATNTAGACALHFPCYKDSLNPDTARLLVDAGATADVCEKSYGCTPLHYAAGAGNVALCRLLVGAGARPETCDFYNYTAVDYARQA 483
LF+ IPYYG GD D RVR ++++ E++ D YGNT+L+L QY +L+ +L+ + VNA N AGACALHF C+ SL+ AR L+ G+ V E++YGCTPLHYAAG+G+V LC+ LV AGA TCDF+NYTAVDYARQA
Sbjct: 1 LFDFIPYYGAGDASVDGRVRAMVQAAGQEELCGIDHYGNTLLILAAQYKAGELMHAILAKDCI-------DVNAVNDAGACALHFACFSASLDVLVARALIANGSKVRVVERTYGCTPLHYAAGSGHVDLCKDLVAAGAIVATCDFHNYTAVDYARQA 151
BLAST of mRNA_P-wetherbeei_contig5737.1.1 vs. uniprot
Match: A0A7S2K2T0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K2T0_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.080e-38 Identity = 91/245 (37.14%), Postives = 126/245 (51.43%), Query Frame = 1
Query: 1 IALLFEAIPYYGHGDNPADERVRRVLRSLSPEDVAARDAYGNTILLLVCQYSCADLVPLVLSGAAVAGEPTQAGVNATNTAGACALHFPCYKDSLNPDTARLLVDAGATADVCEKSYGCTPLHYAAGAGNVALCRLLVGAGARPETCDFYNYTAVDYARQAEAPDCVQYLEATARQENKATTSAGDGRDGGSSGGGDAAPGF-WQRLVDPTSGLAYHINDRTGESMWEREL--QDKVRALGNARL 726
+ LL E +P++G GD +D VR + L + + D GNT+L+L CQY+ DL+PL++ VNA N GAC LHFPCY D+++ +T LL+D GA A+V E+ YG TPLH+AA +GN LC LL AGA P T D + YA+QA DC+ +L + + G D F W+R D + Y+ N ES+WE E D A+ AR+
Sbjct: 182 LDLLQEILPFFGQGDLSSDVIVRETIEKLPLDALEMPDRLGNTVLILACQYAAYDLIPLLIEKGC--------NVNAQNNDGACCLHFPCYSDTVSVETVELLIDNGAYAEVVERQYGATPLHWAAASGNTFLCSLLANAGASPHTIDLSGCDPIAYAKQANNQDCIDFLSSVQVGDKGVEEQQGMKE-------ADRDSLFEWKRQKDENTEEIYYHNRSRKESLWENEFLEMDAGSAIEKARV 411
BLAST of mRNA_P-wetherbeei_contig5737.1.1 vs. uniprot
Match: A0A7S0XEW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEW9_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.260e-33 Identity = 73/192 (38.02%), Postives = 111/192 (57.81%), Query Frame = 1
Query: 136 LLVCQYSCADLVPLVLSGAAVAGEPTQAGVNATNTAGACALHFPCYKDSLNPDTARLLVDAGATADVCEKSYGCTPLHYAAGAGNVALCRLLVGAGARPETCDFYNYTAVDYARQAEAPDCVQYLEATARQENKATTSAGDGRDGGSSGGGDAAPGFWQRLVDPTSGLAYHINDRTGESMWERELQDKVRAL 711
LL CQY C DLV ++++ A +P NA N G +LHF CY++S + + A+LL+ GA +V E +YGCTPLHY AG G++ C+LL+ GA+ T DFYNYT +DYAR+A V Y + + N+ S+ + D WQ +D +G Y+ N+ TGE +WE++L++++ +
Sbjct: 1 LLACQYKCEDLVRIMINKGA---DP-----NAVNNLGVSSLHFACYRESSSINIAKLLLQFGANPEVKESTYGCTPLHYCAGTGDLPFCKLLITYGAQTNTYDFYNYTCIDYAREAGVIPLVLYFQQIIEKNNRNNISSNVVDNSSFLNLPD-----WQGAIDSVTGGRYYTNNITGECLWEQDLKNRLSVI 179
BLAST of mRNA_P-wetherbeei_contig5737.1.1 vs. uniprot
Match: A0A7S2G1W5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G1W5_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 7.820e-13 Identity = 52/170 (30.59%), Postives = 81/170 (47.65%), Query Frame = 1
Query: 1 IALLFEAIPYYGHGDNPADERVRRVLRSLSPEDVAARDAYGNTILLLVCQYSCADLVPLVLSGAAVAGEPTQAGVNATNTAGACALHFPCYKDSLNPDTARLLVDAGATADVCE--KSYGCTPLHYAAGAGNVALCRLLVGAGARPETCDFYNYTAVDYARQAEAPDCVQ 504
+ LL + + Y+ + D + V + SL ++ + D Y NT+L L Y + L+L A VN N++G+ LH+ C K+ L+ A L+ A + E +S PLHYAA AG++ LC LL+ GA P+ D Y+ A +A DC +
Sbjct: 2 VTLLQDMLSYF-NSDEKSKALVMHTINSLPSYEIDSVDEYDNTLLQLSIMYQAHEAFLLLLEKGAE--------VNHRNSSGSTCLHYACSKECLDVAAAEALLKEDADHSLAESFESGSRMPLHYAAEAGSLPLCELLIKYGADPDAIDAYDQKPYTIALEAGHMDCAE 162
BLAST of mRNA_P-wetherbeei_contig5737.1.1 vs. uniprot
Match: A0A7S0SWI8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWI8_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 7.040e-7 Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 7 LLFEAIPYYGHGDNPADERVRRVLRSLSPEDVAARDAYGNTILLLVCQY 153
+LF+ IP+YG G+ D VR L +LS D+ +RDAYGNT+LLL CQY
Sbjct: 178 VLFQFIPFYGQGNLSNDAIVRAALSNLSIADIDSRDAYGNTLLLLACQY 226 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5737.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5737.1.1 >prot_P-wetherbeei_contig5737.1.1 ID=prot_P-wetherbeei_contig5737.1.1|Name=mRNA_P-wetherbeei_contig5737.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=339bp IALLFEAIPYYGHGDNPADERVRRVLRSLSPEDVAARDAYGNTILLLVCQback to top mRNA from alignment at P-wetherbeei_contig5737:571..1998- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5737.1.1 ID=mRNA_P-wetherbeei_contig5737.1.1|Name=mRNA_P-wetherbeei_contig5737.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1428bp|location=Sequence derived from alignment at P-wetherbeei_contig5737:571..1998- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5737:571..1998- >mRNA_P-wetherbeei_contig5737.1.1 ID=mRNA_P-wetherbeei_contig5737.1.1|Name=mRNA_P-wetherbeei_contig5737.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1017bp|location=Sequence derived from alignment at P-wetherbeei_contig5737:571..1998- (Phaeothamnion wetherbeei SAG_119_79)back to top |