mRNA_P-wetherbeei_contig57325.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57325.1.1 vs. uniprot
Match: A0A7C4TVX2_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TVX2_9HYPH) HSP 1 Score: 130 bits (328), Expect = 5.180e-33 Identity = 72/164 (43.90%), Postives = 105/164 (64.02%), Query Frame = 1
Query: 7 ETDPLLIVLRGVPTWVSLSKGSTIDDEIWLLPAKDARELAVSIVEAVDGIADIRVQIAHLDGRILAETRLNVRALKPLRPSPLVAAVPEAGEQT---------LLRMLARGELLLDTGELEAARLLLRTAAQGGSVAAALKLAQTYDPGEMRRLGMAETSADPA 471
++D LL+V+RGVP ++LS+GS I +EIWL+PA +R++ +I EAV G D+ ++ LDGR+L++ R + A +P + A P A E T L R+ ARGELLLDTG++ AAR++L AA+ GS AAL+L +TYDP +RR G + + D A
Sbjct: 289 DSDALLLVMRGVPDEIALSQGSAIGNEIWLIPAHMSRDIEFTIAEAVTGTFDVTAELVTLDGRLLSQARTQIVA------APTLVAAPAASEPTPPEKLDAGALRRLTARGELLLDTGDISAARIVLERAAEAGSAIAALRLGETYDPVYLRRSGTSAEAGDEA 446
BLAST of mRNA_P-wetherbeei_contig57325.1.1 vs. uniprot
Match: A0A1I7M4C6_9BRAD (Uncharacterized protein n=6 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A1I7M4C6_9BRAD) HSP 1 Score: 67.0 bits (162), Expect = 4.380e-10 Identity = 55/172 (31.98%), Postives = 88/172 (51.16%), Query Frame = 1
Query: 22 LIVLRGVPTWVSLSKGSTIDDEIWLLPAKDARELAVSIVEAVDGIADIRVQIAHL---DGRILA--ETRLN--------------VRALKPLR-----PSPLVAAVPEAGEQTLLRMLARGELLLDTGELEAARLLLRTAAQGGSVAAALKLAQTYDPGEMRRLGMAETSAD 465
++ + G+P L+ G + +E W +PA + AVS++ DG V +A L +G +L +RL+ V A+ P R P+P AV + + ++ RG+ LL +G++ AARLLL AA+GG AAL +A+TYDP +++LG + AD
Sbjct: 182 IVAINGLPADARLTSGKRVANE-WRVPASEVS--AVSVISP-DGFVGQMVAMAELRDSNGAVLVVGSSRLSWKPAASVAPQPSTAVTAVPPTRSLVASPTPQTDAVRSLDPKEISGLVKRGQDLLTSGDVSAARLLLLRAAEGGDARAALLVARTYDPNVLKQLGASGPLAD 349
BLAST of mRNA_P-wetherbeei_contig57325.1.1 vs. uniprot
Match: A0A6N6SVB9_9HYPH (Sel1 repeat family protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SVB9_9HYPH) HSP 1 Score: 65.1 bits (157), Expect = 1.500e-9 Identity = 50/166 (30.12%), Postives = 75/166 (45.18%), Query Frame = 1
Query: 31 LRGVPTWVSLSKGSTIDDEIWLLPAKDARELAVSIVEAVDGIADIRVQIAHLDGRILAETRLNV-----------------RALKPLRPSPLVA------AVPEAGE------QTLLRMLARGELLLDTGELEAARLLLRTAAQGGSVAAALKLAQTYDPGEMRRL 441
LRG+P+ VSL++G I W +P L I V G +++ + + +DG +LAE R + A P P P+ A AVP A E + +++ +G+ L G + AR + AA G A+KLA T+DPGE+ RL
Sbjct: 93 LRGLPSTVSLTEGYAIGPGSWAVPLFSLPALKAVIPAGVSGRSELTISLVAVDGTLLAEARTALVVGSAAMMAPGEGQQPPSANVPSPPQPVPATRPERYAVPRAPELPPDEKARVEKLVGQGDRFLSQGNIAIARQFYQRAADAGYAPGAVKLAATFDPGELDRL 258
BLAST of mRNA_P-wetherbeei_contig57325.1.1 vs. uniprot
Match: A0A3S0E1Y2_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0E1Y2_9HYPH) HSP 1 Score: 63.9 bits (154), Expect = 3.600e-9 Identity = 46/169 (27.22%), Postives = 75/169 (44.38%), Query Frame = 1
Query: 31 LRGVPTWVSLSKGSTIDDEIWLLPAKDARELAVSIVEAVDGIADIRVQIAHLDGRILAETR--LNVRALKP--------------------LRPSPLVAAVPEAGEQTLLRMLARGELLLDTGELEAARLLLRTAAQGGSVAAALKLAQTYDPGEMRRLGMAETSADPA 471
+RG+P SLS G + +W +P + L ++ + + G A + VQ+ DG +LAET L + KP + +P + Q +++ +G+ L++G + AR + AA G AL+LA T+DP E+ RLG PA
Sbjct: 89 IRGLPEAGSLSDGYAVALGVWAVPLRALASLKATLPQGLSGRAPLTVQLVSADGVVLAETTTLLTLDIAKPXXXXXXXXXXXXXXXXXXXXVEAAPPRPRLSAEERQRAEKLVVQGDRYLESGNVAIARQFFQRAADAGLALGALRLAATFDPNELSRLGTQGVVPSPA 257
BLAST of mRNA_P-wetherbeei_contig57325.1.1 vs. uniprot
Match: UPI001FE58183 (hypothetical protein n=2 Tax=Bradyrhizobium liaoningense TaxID=43992 RepID=UPI001FE58183) HSP 1 Score: 61.2 bits (147), Expect = 4.620e-8 Identity = 50/172 (29.07%), Postives = 85/172 (49.42%), Query Frame = 1
Query: 22 LIVLRGVPTWVSLSKGSTIDDEIWLLPAKDARELAVSIVEAVDGIADIRVQIAHL---DGRILA--ETRLNVRALKPLRPSPLVAAVPEAGEQTLLR-------------------MLARGELLLDTGELEAARLLLRTAAQGGSVAAALKLAQTYDPGEMRRLGMAETSAD 465
++ + G+P L+ G + +E W +PA + AVS++ DG V +A L +G +L +RL+ + + P P A P + ++ ++ RG+ LL +G++ AARLLL AA+GG AAL +A+T+DP +++LG + AD
Sbjct: 184 IVAINGLPADARLTSGKRVVNE-WRVPASEIS--AVSVIPP-DGFVGQMVAMAELRDSNGAVLVVGSSRLSWKPAVTVAPQPSTAVTPVPPARAVVASPPQQTDAVRNLDPREISGLVKRGQDLLASGDVSAARLLLLRAAEGGDAHAALLVARTFDPAVLKQLGASGPLAD 351
BLAST of mRNA_P-wetherbeei_contig57325.1.1 vs. uniprot
Match: A0A176Z5L7_9BRAD (Uncharacterized protein n=4 Tax=Bradyrhizobium TaxID=374 RepID=A0A176Z5L7_9BRAD) HSP 1 Score: 60.5 bits (145), Expect = 4.900e-8 Identity = 52/172 (30.23%), Postives = 85/172 (49.42%), Query Frame = 1
Query: 22 LIVLRGVPTWVSLSKGSTIDDEIWLLPAKDARELAVSIVEAVDGIADIRVQIAHL---DGRILA--ETRLNVRALKPLRPSPLVA-------------------AVPEAGEQTLLRMLARGELLLDTGELEAARLLLRTAAQGGSVAAALKLAQTYDPGEMRRLGMAETSAD 465
++ + G+P L+ G + +E W +PA + AVS++ G A V +A L +G +L +RL+ + + P P A AV + + ++ RG+ LL +G++ AARLLL AA+GG AAL +A+TYDP +++LG + AD
Sbjct: 51 IVAINGLPGDARLTSGKRVANE-WRVPASEIS--AVSVIPP-HGFAGQMVAMAELRDSNGAVLVVGSSRLSWKPAVTVAPQPSAAVXXXXXXXXXXXXXXXQTDAVRNLDPKEISGLVKRGQDLLTSGDVSAARLLLLRAAEGGDARAALLVARTYDPTVLKQLGASGPLAD 218
BLAST of mRNA_P-wetherbeei_contig57325.1.1 vs. uniprot
Match: Q07GV6_RHOP5 (Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) TaxID=316055 RepID=Q07GV6_RHOP5) HSP 1 Score: 58.5 bits (140), Expect = 4.110e-7 Identity = 47/172 (27.33%), Postives = 77/172 (44.77%), Query Frame = 1
Query: 10 TDPLLIVLRGVPTWVSLSKGSTIDDEIWLLPAKDARELAVSIVEAVDGIADIRVQIAHLDGRILAETRLNVRALKPLRPSPLVA-------AVPEAGEQ------TLLR-----MLARGELLLDTGELEAARLLLRTAAQGGSVAAALKLAQTYDPGEMRRLGMAETSADPA 471
+D +++ G+ LS G I W + D + V G+ +I + +D +++ + L + +P +P + A P G TL R +L RG L+ G++ AARL+LR AA GG AAL L +T+DP + +L + S +PA
Sbjct: 207 SDDSAVLISGLAVGARLSAGQEIGSGTWRVRLTDIGQARVIPPTDFIGVMNITAALVGVDAKVIDKGLLRIDWARPAAAAPALERSAPSRDASPAGGPPQPPELLTLDRGEIDGLLKRGRDFLENGDIAAARLVLRRAANGGDAQAALLLGKTFDPKVIEQLHVIGVSPNPA 378
BLAST of mRNA_P-wetherbeei_contig57325.1.1 vs. uniprot
Match: A0A7C4TST2_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TST2_9HYPH) HSP 1 Score: 55.8 bits (133), Expect = 2.490e-6 Identity = 48/166 (28.92%), Postives = 74/166 (44.58%), Query Frame = 1
Query: 31 LRGVPTWVSLSKGSTIDDEIWLLPAKDARELAVSIVEAVDGIADIRVQIAHLDGRILAETRLNV-------------------------RA---LKPLRPSPLVAAVPEAGEQTLLRML-ARGELLLDTGELEAARLLLRTAAQGGSVAAALKLAQTYDPGEMRRL 441
+RG+P LS+G I +W +P +L + + + G + + + +DG++ AET + + RA KP P P+ A P A + + L A+G L +G + AAR+ R AA+ G AA LA TYDP E+ RL
Sbjct: 62 IRGLPQGAMLSEGFGIAAGLWAVPLNGLPKLRMRLGAPLAGETRLTLSLVTVDGKVHAETTVALLPTADTSRSAGPPRETASTGEGPTPRASGDAKPAAPPPVGA--PAAADLAQAKALHAQGNQKLASGNVAAARMFYRRAAEAGFADAAFALAATYDPEELSRL 225
BLAST of mRNA_P-wetherbeei_contig57325.1.1 vs. uniprot
Match: A0A182D3L0_BLAVI (Uncharacterized protein n=2 Tax=Blastochloris viridis TaxID=1079 RepID=A0A182D3L0_BLAVI) HSP 1 Score: 52.8 bits (125), Expect = 3.670e-5 Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 244 PSPLVAAVP--EAGEQTLLRMLARGELLLDTGELEAARLLLRTAAQGGSVAAALKLAQTYDPGEMRRLGMAETSAD 465
P P+VAA P + + +LARG + G++ AARLLLR AA G +AAL L T+DP +R L + T+ D
Sbjct: 209 PEPIVAAPPGPPLDREEIATLLARGRGFIANGDIAAARLLLRRAADAGDASAALMLGSTFDPTTLRPLKVIGTAPD 284 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57325.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57325.1.1 >prot_P-wetherbeei_contig57325.1.1 ID=prot_P-wetherbeei_contig57325.1.1|Name=mRNA_P-wetherbeei_contig57325.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=157bp MVETDPLLIVLRGVPTWVSLSKGSTIDDEIWLLPAKDARELAVSIVEAVDback to top mRNA from alignment at P-wetherbeei_contig57325:3..473- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57325.1.1 ID=mRNA_P-wetherbeei_contig57325.1.1|Name=mRNA_P-wetherbeei_contig57325.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig57325:3..473- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57325:3..473- >mRNA_P-wetherbeei_contig57325.1.1 ID=mRNA_P-wetherbeei_contig57325.1.1|Name=mRNA_P-wetherbeei_contig57325.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig57325:3..473- (Phaeothamnion wetherbeei SAG_119_79)back to top |