mRNA_P-wetherbeei_contig57183.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57183.1.1 vs. uniprot
Match: A0A358B7T3_9BURK (IclR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. TaxID=1904254 RepID=A0A358B7T3_9BURK) HSP 1 Score: 330 bits (846), Expect = 5.670e-113 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1
Query: 1 DLIAGLAKGLSLIEAFDDEHARLTSSEAARRVGISPAAARRCLLTLCQGGYARTDGKRFWLDHGVLRLAYAYSTSTRLPRLLQPTLDALSERTRESASVVVLHGMEAMVAARSTARKSLTVGLGVGSRLPLHCSATGRVLLSSKSGADFESLFNAMPLCRLTPHTLTDPV 510
DLIAGLAKGLSLIEAFDDEHARLTSSEAARRVGISPAAARRCLLTLCQGGYARTDGKRFWLDHGVLRLAYAYSTSTRLPRLLQPTLDALSERTRESASVVVLHGMEAMVAARSTARKSLTVGLGVGSRLPLHCSATGRVLLSSKSGADFESLFNAMPLCRLTPHTLTDPV
Sbjct: 14 DLIAGLAKGLSLIEAFDDEHARLTSSEAARRVGISPAAARRCLLTLCQGGYARTDGKRFWLDHGVLRLAYAYSTSTRLPRLLQPTLDALSERTRESASVVVLHGMEAMVAARSTARKSLTVGLGVGSRLPLHCSATGRVLLSSKSGADFESLFNAMPLCRLTPHTLTDPV 183
BLAST of mRNA_P-wetherbeei_contig57183.1.1 vs. uniprot
Match: A0A1F8VSY8_9BURK (IclR-ED domain-containing protein n=4 Tax=Comamonadaceae TaxID=80864 RepID=A0A1F8VSY8_9BURK) HSP 1 Score: 295 bits (755), Expect = 4.020e-99 Identity = 150/170 (88.24%), Postives = 159/170 (93.53%), Query Frame = 1
Query: 1 DLIAGLAKGLSLIEAFDDEHARLTSSEAARRVGISPAAARRCLLTLCQGGYARTDGKRFWLDHGVLRLAYAYSTSTRLPRLLQPTLDALSERTRESASVVVLHGMEAMVAARSTARKSLTVGLGVGSRLPLHCSATGRVLLSSKSGADFESLFNAMPLCRLTPHTLTDPV 510
DLIAGLAKGL LIEAFDD HARLTSSEAARRVGISPAAARRCLLTLC GGYA+TDGKRFWL+HG+LRL+YAY+ STRLPRLLQPTLDALSERTRESASV VLHG E MVAARSTARKSLTVGLGVGSRLPLHCSATGRVLLSS+ A+FE+LF AMPL RLTPHT+TDPV
Sbjct: 14 DLIAGLAKGLRLIEAFDDMHARLTSSEAARRVGISPAAARRCLLTLCHGGYAQTDGKRFWLNHGILRLSYAYAASTRLPRLLQPTLDALSERTRESASVAVLHGTEVMVAARSTARKSLTVGLGVGSRLPLHCSATGRVLLSSRPAAEFETLFKAMPLSRLTPHTITDPV 183
BLAST of mRNA_P-wetherbeei_contig57183.1.1 vs. uniprot
Match: A0A315EKJ4_9BURK (IclR-ED domain-containing protein n=1 Tax=Limnohabitans curvus TaxID=323423 RepID=A0A315EKJ4_9BURK) HSP 1 Score: 217 bits (553), Expect = 1.770e-68 Identity = 112/166 (67.47%), Postives = 133/166 (80.12%), Query Frame = 1
Query: 7 IAGLAKGLSLIEAFDDEHARLTSSEAARRVGISPAAARRCLLTLCQGGYARTDGKRFWLDHGVLRLAYAYSTSTRLPRLLQPTLDALSERTRESASVVVLHGMEAMVAARSTARKSLTVGLGVGSRLPLHCSATGRVLLSSKSGADFESLFNAMPLCRLTPHTLTD 504
IAGLAKGL ++ AF+ + RLT S+AAR VGI+PAAARR LLTLC GY TDGK FW DHGVLRLAYAY+++TRLPRLLQP LDALSERTRESAS+ VLH +VAARSTA++SLTVGLGVGS+LPLHCSATGRVLL++ E++ L ++TPHT T+
Sbjct: 14 IAGLAKGLQILSAFNGAYTRLTQSQAARLVGITPAAARRSLLTLCDQGYVATDGKYFWPDHGVLRLAYAYASATRLPRLLQPALDALSERTRESASIAVLHNQYVLVAARSTAQRSLTVGLGVGSQLPLHCSATGRVLLAAHPIKTREAMLKKSTLLKMTPHTETN 179
BLAST of mRNA_P-wetherbeei_contig57183.1.1 vs. uniprot
Match: UPI001918AB46 (helix-turn-helix domain-containing protein n=1 Tax=Ramlibacter sp. AW1 TaxID=2801330 RepID=UPI001918AB46) HSP 1 Score: 210 bits (535), Expect = 9.480e-66 Identity = 107/168 (63.69%), Postives = 129/168 (76.79%), Query Frame = 1
Query: 1 DLIAGLAKGLSLIEAFDDEHARLTSSEAARRVGISPAAARRCLLTLCQGGYARTDGKRFWLDHGVLRLAYAYSTSTRLPRLLQPTLDALSERTRESASVVVLHGMEAMVAARSTARKSLTVGLGVGSRLPLHCSATGRVLLSSKSGADFESLFNAMPLCRLTPHTLTD 504
D IAGLAKGL L+EAFD H R+T +EAARR+ +S AAARRCLLTLC+ GY +TDGK FWL HG LR++YAY+ STRLPRL+QP LD+LSER+R+SAS+ VLH ++AARSTAR++ VGLGVGSRLPLHCSA GRVLL+ GA L + TP T+TD
Sbjct: 12 DRIAGLAKGLRLLEAFDSAHTRMTITEAARRIDVSLAAARRCLLTLCELGYMQTDGKHFWLGHGALRISYAYAASTRLPRLVQPALDSLSERSRDSASLAVLHEGAVVIAARSTARRTFRVGLGVGSRLPLHCSAAGRVLLADLPGAQARKLLASTQREAFTPRTVTD 179
BLAST of mRNA_P-wetherbeei_contig57183.1.1 vs. uniprot
Match: UPI0010F6A3F0 (helix-turn-helix domain-containing protein n=1 Tax=Hydrogenophaga sp. 2FB TaxID=2502187 RepID=UPI0010F6A3F0) HSP 1 Score: 201 bits (510), Expect = 5.800e-62 Identity = 100/168 (59.52%), Postives = 134/168 (79.76%), Query Frame = 1
Query: 1 DLIAGLAKGLSLIEAFDDEHARLTSSEAARRVGISPAAARRCLLTLCQGGYARTDGKRFWLDHGVLRLAYAYSTSTRLPRLLQPTLDALSERTRESASVVVLHGMEAMVAARSTARKSLTVGLGVGSRLPLHCSATGRVLLSSKSGADFESLFNAMPLCRLTPHTLTD 504
D + GL KG+ ++EAFD H R+T +EAA RVG+SPA+ARRCL+TLC+ GYA+TDGKR+WL HG LRL+YAY++ST+LPRL+QP LDA+SER+RESAS+ VL A++AARSTAR++L +GL VGSRLPL+CSA GR LL+S ++ ++ M +LT +T+TD
Sbjct: 11 DHMGGLKKGIRILEAFDSIHTRMTVTEAALRVGLSPASARRCLITLCELGYAQTDGKRYWLGHGALRLSYAYASSTKLPRLIQPVLDAMSERSRESASLAVLLDGAAVIAARSTARRTLRIGLVVGSRLPLYCSAAGRALLASLPESEAVAMLRGMERPKLTVNTVTD 178
BLAST of mRNA_P-wetherbeei_contig57183.1.1 vs. uniprot
Match: A0A3P4B1P2_9BURK (Pca regulon regulatory protein n=1 Tax=Pigmentiphaga humi TaxID=2478468 RepID=A0A3P4B1P2_9BURK) HSP 1 Score: 196 bits (497), Expect = 6.460e-60 Identity = 99/166 (59.64%), Postives = 127/166 (76.51%), Query Frame = 1
Query: 1 DLIAGLAKGLSLIEAFDDEHARLTSSEAARRVGISPAAARRCLLTLCQGGYARTDGKRFWLDHGVLRLAYAYSTSTRLPRLLQPTLDALSERTRESASVVVLHGMEAMVAARSTARKSLTVGLGVGSRLPLHCSATGRVLLSSKSGADFESLFNAMPLCRLTPHTL 498
D + GL KGL LIEAFD H R+T +EAA RVGISPAAARRCLLTLC+ GYA+TDGK++WL HG LR+AYAY+ STRLPR+LQP LDAL+ERTRES S+ VL G +AAR+TAR+++ VGL +GS LPL CS+ GRVL+++ ++ +L + + T HT+
Sbjct: 18 DRMGGLVKGLQLIEAFDSAHGRMTPTEAALRVGISPAAARRCLLTLCELGYAQTDGKQYWLSHGALRVAYAYAASTRLPRMLQPALDALTERTRESGSLCVLDGNRVAIAARATARRTMRVGLVMGSHLPLFCSSGGRVLMAALRDDEWRALVASAAMEPYTRHTV 183
BLAST of mRNA_P-wetherbeei_contig57183.1.1 vs. uniprot
Match: UPI00131A98F0 (helix-turn-helix domain-containing protein n=1 Tax=Xenophilus sp. L33 TaxID=1747220 RepID=UPI00131A98F0) HSP 1 Score: 169 bits (428), Expect = 2.080e-49 Identity = 89/168 (52.98%), Postives = 115/168 (68.45%), Query Frame = 1
Query: 1 DLIAGLAKGLSLIEAFDDEHARLTSSEAARRVGISPAAARRCLLTLCQGGYARTDGKRFWLDHGVLRLAYAYSTSTRLPRLLQPTLDALSERTRESASVVVLHGMEAMVAARSTARKSLTVGLGVGSRLPLHCSATGRVLLSSKSGADFESLFNAMPLCRLTPHTLTD 504
D + L KGL ++ F +HARLT S+AAR G+SPA+ARR L+TL Y +DGK FW++ VL +A +Y S +P L QP LDALSERTRESAS+ +L +A++ ARST R+SL+ GLG+GSRLP HCSA GRVLL+S + S MP +LTPHT+ D
Sbjct: 22 DFVGSLGKGLEVMACFGRQHARLTVSQAARLTGVSPASARRSLMTLAALSYLGSDGKHFWMEPKVLLIAQSYLASRPMPSLAQPLLDALSERTRESASLALLQDDDAIIVARSTGRRSLSTGLGIGSRLPAHCSALGRVLLASLPPDEAASRVARMPRNKLTPHTVDD 189
BLAST of mRNA_P-wetherbeei_contig57183.1.1 vs. uniprot
Match: UPI001EFFA272 (helix-turn-helix domain-containing protein n=1 Tax=Pleomorphomonas sp. COJ-58 TaxID=2766474 RepID=UPI001EFFA272) HSP 1 Score: 169 bits (427), Expect = 2.100e-49 Identity = 93/168 (55.36%), Postives = 115/168 (68.45%), Query Frame = 1
Query: 1 DLIAGLAKGLSLIEAFDDEHARLTSSEAARRVGISPAAARRCLLTLCQGGYARTDGKRFWLDHGVLRLAYAYSTSTRLPRLLQPTLDALSERTRESASVVVLHGMEAMVAARSTARKSLTVGLGVGSRLPLHCSATGRVLLSSKSGADFESLFNAMPLCRLTPHTLTD 504
D + GLA+GL +IE FDDEH RLT +E A G+S AAARR LLTL + GYAR+DG+ F L +LRL YA+ ST LP+L+QP L+ LSER ES S V G + + ARS R+ ++VGL VGSRLPLHC++ GRVLLS +D +L A PL RLTPHT D
Sbjct: 11 DFVGGLARGLKVIECFDDEHERLTIAEVAGLTGLSRAAARRSLLTLERLGYARSDGRGFCLTPRILRLGYAFLESTALPQLMQPFLEHLSERLNESCSASVRDGDQLVYIARSATRRIVSVGLAVGSRLPLHCTSMGRVLLSGMPRSDMIALLKAEPLRRLTPHTQID 178
BLAST of mRNA_P-wetherbeei_contig57183.1.1 vs. uniprot
Match: A0A370JWC1_9DEIN (IclR family transcriptional regulator n=1 Tax=Meiothermus sp. QL-1 TaxID=2058095 RepID=A0A370JWC1_9DEIN) HSP 1 Score: 165 bits (418), Expect = 6.130e-48 Identity = 87/167 (52.10%), Postives = 114/167 (68.26%), Query Frame = 1
Query: 7 IAGLAKGLSLIEAFDDEHARLTSSEAARRVGISPAAARRCLLTLCQGGYARTDGKRFWLDHGVLRLAYAYSTSTRLPRLLQPTLDALSERTRESASVVVLHGMEAMVAARSTARKSLTVGLGVGSRLPLHCSATGRVLLSSKSGADFESLFNAMPLCRLTPHTLTDP 507
+ LA+GL++I FD++H RLT SE AR G++ A ARR LLTLC GY TDGK+FWL +L L +AY +ST LPRLLQP L+ +S + ES S +L G E + AR+ R+ ++VGLGVGSRLP +C++ GRVLL++ A E+ PL LTPHTLTDP
Sbjct: 22 VEALARGLAVIRCFDEQHERLTISEVARLTGLTRATARRSLLTLCALGYMATDGKQFWLTPRILSLGHAYLSSTPLPRLLQPVLEEVSGQLGESCSASILDGGEIVYIARAATRRVVSVGLGVGSRLPAYCTSMGRVLLAALEPAALEAYLARTPLRPLTPHTLTDP 188
BLAST of mRNA_P-wetherbeei_contig57183.1.1 vs. uniprot
Match: A0A323U476_9DEIN (IclR family transcriptional regulator n=1 Tax=Meiothermus sp. Pnk-1 TaxID=873128 RepID=A0A323U476_9DEIN) HSP 1 Score: 164 bits (416), Expect = 1.230e-47 Identity = 88/167 (52.69%), Postives = 112/167 (67.07%), Query Frame = 1
Query: 7 IAGLAKGLSLIEAFDDEHARLTSSEAARRVGISPAAARRCLLTLCQGGYARTDGKRFWLDHGVLRLAYAYSTSTRLPRLLQPTLDALSERTRESASVVVLHGMEAMVAARSTARKSLTVGLGVGSRLPLHCSATGRVLLSSKSGADFESLFNAMPLCRLTPHTLTDP 507
+ LA+GLS+I FD+ H RLT SE AR G+S A ARR LLTL GY TDGK FWL +L L +AY +ST LPRLLQP L+ +S + ES S +L G E + AR+ R+ ++VGLGVGSRLP +C++ GRVLL++ A+ E+ PL LTPHTLTDP
Sbjct: 22 VEALARGLSVIRCFDEGHERLTISEVARLTGLSRATARRSLLTLHTLGYVATDGKLFWLTPKILSLGHAYLSSTPLPRLLQPVLEEVSAQLHESCSASILDGGEIVYIARAATRRVISVGLGVGSRLPAYCTSMGRVLLAALEPAELEAYLQRTPLRPLTPHTLTDP 188 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57183.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57183.1.1 >prot_P-wetherbeei_contig57183.1.1 ID=prot_P-wetherbeei_contig57183.1.1|Name=mRNA_P-wetherbeei_contig57183.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp DLIAGLAKGLSLIEAFDDEHARLTSSEAARRVGISPAAARRCLLTLCQGGback to top mRNA from alignment at P-wetherbeei_contig57183:2..511- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57183.1.1 ID=mRNA_P-wetherbeei_contig57183.1.1|Name=mRNA_P-wetherbeei_contig57183.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig57183:2..511- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57183:2..511- >mRNA_P-wetherbeei_contig57183.1.1 ID=mRNA_P-wetherbeei_contig57183.1.1|Name=mRNA_P-wetherbeei_contig57183.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig57183:2..511- (Phaeothamnion wetherbeei SAG_119_79)back to top |