mRNA_P-wetherbeei_contig5711.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5711.2.1
Unique NamemRNA_P-wetherbeei_contig5711.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5711.2.1 vs. uniprot
Match: A0A1F4FCM4_9PROT (Glycolate oxidase subunit GlcE n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4FCM4_9PROT)

HSP 1 Score: 431 bits (1108), Expect = 4.200e-148
Identity = 226/363 (62.26%), Postives = 270/363 (74.38%), Query Frame = 1
Query:    1 MQAAFDRIAERVRAAAAAGTGLRLRGGGTKDFYGGPLSGDVLDLREYAGITSYEPSELVATARCGTPLAEFEAALAANRQMLPFEPPHFGPGATLGGCVAAGLAGPRRAANGLYYGAARDYVLGCTLMDASGGAMRFGGQVMKNVAGYDVSRLATGSMGTLGAILEVSLKVLPMPVAVATLRFAVDEAGAIRRLNDWGGRPIPVSASAWEAGALAVRLEGAEAAVHSACASLGGERVEPSQADAYWQGLRNHTAPFFASSSGPLWRVSVPSTIPPIAPAGGSPFEQLVEWGGALRWWKTDADASAVRRAAKAVGGHATLFRGGNKSAGVFTPLDPVAARLHRNVKAVFDPAGIFNRGRMYPEW 1089
            M  A   +A R+R A+  GT LRLRGGG+KDFYGG   G++LD R YAGI ++EP+ELV TARCGTPL+E E+ALAAN QML FEPPHFGPGAT+GGCVAAGL+GPRRAA G    A RDYVLG  L+D  G  +RFGG VMKNVAGYDVSRL  G++GTLG I E+SLK+ P P A  TLR  + E  A+  LN W G+P+P+SASAW  G L VRL GA++A+ +A   +GGERVE  +A+ +W G+R HT  FF   + PLWR++V S+  PI      P E+L+EWGGALRW +T ADA+AVR AA A GGHATLFR  +KSAG FTPLDPVA RLHRN+KA FDPAGI N GRMYPE+
Sbjct:    1 MDTALAGLAARIREASERGTALRLRGGGSKDFYGGTPRGELLDTRAYAGIVAHEPTELVVTARCGTPLSELESALAANGQMLAFEPPHFGPGATVGGCVAAGLSGPRRAAAG----ALRDYVLGAKLVDGRGRVLRFGGTVMKNVAGYDVSRLLAGALGTLGLIAEISLKLFPRPGAELTLRLEMPEERALESLNRWAGQPLPISASAWNDGDLGVRLSGADSALRAAAERIGGERVEGGEAERFWSGIREHTIGFFGGDA-PLWRLAVRSSAAPIE----LPGERLIEWGGALRWVRTRADAAAVRAAAAAAGGHATLFRAADKSAGAFTPLDPVAMRLHRNLKAAFDPAGILNPGRMYPEF 354          
BLAST of mRNA_P-wetherbeei_contig5711.2.1 vs. uniprot
Match: A0A1F4DQ51_9PROT (Glycolate oxidase subunit GlcE n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4DQ51_9PROT)

HSP 1 Score: 423 bits (1087), Expect = 7.200e-145
Identity = 232/367 (63.22%), Postives = 267/367 (72.75%), Query Frame = 1
Query:    1 MQAAFDRIAERVRAAAAAGTGLRLRGGGTKDFYGGPLSGDVLDLREYAGITSYEPSELVATARCGTPLAEFEAALAANRQMLPFEPPHFGPGATLGGCVAAGLAGPRRAANGLYYGAARDYVLGCTLMDASGGAMRFGGQVMKNVAGYDVSRLATGSMGTLGAILEVSLKVLPMPVAVATLRFAVDEAGAIRRLNDWGGRPIPVSASAWEAGALAVRLEGAEAAVHSACASLGGERVEPSQADAYWQGLRNHTAPFFASSSGPLWRVSVPSTIPPIAPAGGSPFEQLVEWGGALRWWKTDADASAVRRAAKAVGGHATLFRGGNK----SAGVFTPLDPVAARLHRNVKAVFDPAGIFNRGRMYPEW 1089
            M  A    AE +RAA+AA   LRL GGG+KDFYG  L G  LD R Y+GI SYEP+ELV TARCGTPLA+ E  L A  QML FEPPHFG GAT+GG VAAGL+GPRRAA G    A RDYVLG T+MDA G  MRFGG VMKNVAGYDVSRL  GSMGTLG IL+VS+KVLPMP A ATLRF + +  AI   N W GRP+PVSASAW    + +RL GA A VHSA A LGGERV  ++A A+W G+R HT PFF +   PLWR+SVPS  PP+A     P +Q++EWGGALRW  T+ADA  VR AA+  GGHATLFRGG++    SAGVF PL+P  AR+HR++K  FDP GIFNRGRMY E+
Sbjct:    1 MSDALTGFAEAIRAASAAKQPLRLHGGGSKDFYGQSLQGTPLDCRGYSGIASYEPTELVVTARCGTPLADLEGELRAKGQMLAFEPPHFGSGATVGGMVAAGLSGPRRAAAG----AVRDYVLGVTVMDARGAVMRFGGTVMKNVAGYDVSRLFAGSMGTLGMILDVSMKVLPMPAAEATLRFEMPQDKAIESFNRWAGRPLPVSASAWMDTDVMLRLSGATA-VHSAIAKLGGERVADAEAGAFWTGIREHTDPFFRTQP-PLWRISVPSAAPPLA----LPGDQMIEWGGALRWLATNADARTVREAARRSGGHATLFRGGSEEQRQSAGVFQPLEPALARIHRDLKTSFDPQGIFNRGRMYAEF 357          
BLAST of mRNA_P-wetherbeei_contig5711.2.1 vs. uniprot
Match: A0A1F3YKG2_9PROT (Glycolate oxidase subunit GlcE n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F3YKG2_9PROT)

HSP 1 Score: 421 bits (1081), Expect = 5.470e-144
Identity = 222/342 (64.91%), Postives = 253/342 (73.98%), Query Frame = 1
Query:   64 LRLRGGGTKDFYGGPLSGDVLDLREYAGITSYEPSELVATARCGTPLAEFEAALAANRQMLPFEPPHFGPGATLGGCVAAGLAGPRRAANGLYYGAARDYVLGCTLMDASGGAMRFGGQVMKNVAGYDVSRLATGSMGTLGAILEVSLKVLPMPVAVATLRFAVDEAGAIRRLNDWGGRPIPVSASAWEAGALAVRLEGAEAAVHSACASLGGERVEPSQADAYWQGLRNHTAPFFASSSGPLWRVSVPSTIPPIAPAGGSPFEQLVEWGGALRWWKTDADASAVRRAAKAVGGHATLFRGGNKSAGVFTPLDPVAARLHRNVKAVFDPAGIFNRGRMYPEW 1089
            LRLRGGGTKDFYG    G+VLD R  AG+T+YEP+ELV TA CGT LAE EAAL ANRQML FEPP+FG GAT+GG +AAGL+GPRRAA G    A RD+VLG T+MDA    +RFGG VMKNVAGYDVSRL  GSMGTLG IL+ SLKVLP+PVA  TLRF + E  AI  LN W GRP+P+SASAW    LA+RL GA AAV +AC  LGG RV   +A AYW G+R HT PFF     PLWR+SVPS  PP+A  G     QL+EWGGALRW  T ADA  +R AA+  GGHATLFRGG+KSAGVF PL+P  A++H  +KA FDP  IFNRGRMY E+
Sbjct:   23 LRLRGGGTKDFYGQSFEGEVLDTRACAGVTAYEPTELVVTANCGTGLAELEAALHANRQMLAFEPPYFGAGATVGGMLAAGLSGPRRAAAG----AVRDFVLGVTIMDARARVLRFGGTVMKNVAGYDVSRLVAGSMGTLGLILDASLKVLPLPVAETTLRFEMPEDKAIEALNRWAGRPLPISASAWTGSELALRLSGAAAAVRAACEKLGGGRVGDGEARAYWSGVREHTDPFFRGDI-PLWRLSVPSNAPPLALPGA----QLIEWGGALRWLATSADARVLREAARRAGGHATLFRGGDKSAGVFQPLEPALAKIHAKLKASFDPEAIFNRGRMYTEF 355          
BLAST of mRNA_P-wetherbeei_contig5711.2.1 vs. uniprot
Match: UPI001C7F711F (glycolate oxidase subunit GlcE n=1 Tax=Noviherbaspirillum aridicola TaxID=2849687 RepID=UPI001C7F711F)

HSP 1 Score: 418 bits (1075), Expect = 4.460e-143
Identity = 224/365 (61.37%), Postives = 267/365 (73.15%), Query Frame = 1
Query:    1 MQAAFDRIAERVRAAAAAGTGLRLRGGGTKDFYGGPLSGDVLDLREYAGITSYEPSELVATARCGTPLAEFEAALAANRQMLPFEPPHFGPGATLGGCVAAGLAGPRRAANGLYYGAARDYVLGCTLMDASGGAMRFGGQVMKNVAGYDVSRLATGSMGTLGAILEVSLKVLPMPVAVATLRFAVDEAGAIRRLNDWGGRPIPVSASAWEAGALAVRLEGAEAAVHSACASLGGERVEPSQADAYWQGLRNHTAPFFASS--SGPLWRVSVPSTIPPIAPAGGSPFEQLVEWGGALRWWKTDADASAVRRAAKAVGGHATLFRGGNKSAGVFTPLDPVAARLHRNVKAVFDPAGIFNRGRMYPEW 1089
            M+ A  +  + V AAA AG  LR+RGGG+KD+YG    G++LD R Y+GI  YEP+ELV TARCGTPLAE EAALA  RQML FEPP FG G+T+GG VAAGL+GPRR A G    A RD+VLG  LMD  G  +RFGGQVMKNVAGYDVSRL  GS+GTLG IL+VSLKVLP+P    TLR  +DEA A+ +LN WGG+P+P++ASAW  G L VRL GAEAAV +A   +GGE  E   A  +WQGLR+H   FF++S  + PLWR+S+P+   P+A  G    EQL+EWGGA RW + DADA  VR AA   GGHATLFRGG+K+AGVF PL P  A +HRN+KA FDPAGIFN GRMYPE+
Sbjct:    1 MEQALQQFRDAVTAAANAGKALRIRGGGSKDWYGQRFDGEILDTRAYSGIVDYEPTELVITARCGTPLAEIEAALAERRQMLAFEPPRFGAGSTIGGVVAAGLSGPRRQAAG----AVRDFVLGAALMDGKGEVLRFGGQVMKNVAGYDVSRLLAGSLGTLGLILDVSLKVLPVPYCETTLRLEMDEAKALDQLNLWGGQPLPITASAWHGGVLIVRLSGAEAAVAAAKQKMGGE--EDRDAAPFWQGLRDHENAFFSASGNAAPLWRLSLPTVAKPLALEG----EQLIEWGGAQRWLRGDADARTVRAAAAGAGGHATLFRGGDKAAGVFHPLAPAIATIHRNLKAAFDPAGIFNPGRMYPEF 355          
BLAST of mRNA_P-wetherbeei_contig5711.2.1 vs. uniprot
Match: UPI00124F5C2C (glycolate oxidase subunit GlcE n=2 Tax=Noviherbaspirillum TaxID=1344552 RepID=UPI00124F5C2C)

HSP 1 Score: 417 bits (1072), Expect = 1.270e-142
Identity = 220/364 (60.44%), Postives = 268/364 (73.63%), Query Frame = 1
Query:    1 MQAAFDRIAERVRAAAAAGTGLRLRGGGTKDFYGGPLSGDVLDLREYAGITSYEPSELVATARCGTPLAEFEAALAANRQMLPFEPPHFGPGATLGGCVAAGLAGPRRAANGLYYGAARDYVLGCTLMDASGGAMRFGGQVMKNVAGYDVSRLATGSMGTLGAILEVSLKVLPMPVAVATLRFAVDEAGAIRRLNDWGGRPIPVSASAWEAGALAVRLEGAEAAVHSACASLGGERVEPSQADAYWQGLRNHTAPFFASSSGP--LWRVSVPSTIPPIAPAGGSPFEQLVEWGGALRWWKTDADASAVRRAAKAVGGHATLFRGGNKSAGVFTPLDPVAARLHRNVKAVFDPAGIFNRGRMYPE 1086
            M+ A  +  + + AAA+AG  LR+RGGGTKD+YG  L GD+LD REY+GI +Y+P+ELV TARCGTPL E EAALA + Q+L FEPP +GP +T+GG VAAGL+GPRR A     GA RD+VLG  LMDA G  + FGGQVMKNVAGYDVSRL  GS+GTLG ILEVSLKVLP   A  TLRF + +  AI +LN WGG+P+PVSASAW  G L VRL GAEAAV SA   +GGE  E +QA+ +W  LRNH   FFA+++GP  LWR+S+PS   P+A  G    EQL+EWGGA RW +++ADA+ +R      GGHATL+RGG+KS GVF PL P  A++HRN+K  FDPAGIFNRGRMY +
Sbjct:    1 MEQALQQFRDAINAAASAGKPLRIRGGGTKDWYGQALQGDILDTREYSGIIAYDPTELVITARCGTPLLEIEAALAQHNQVLAFEPPQYGPASTIGGVVAAGLSGPRRQA----VGAVRDFVLGAVLMDAKGEVLHFGGQVMKNVAGYDVSRLLAGSLGTLGLILEVSLKVLPKAFAETTLRFEMPQDRAIDQLNRWGGQPLPVSASAWHGGVLIVRLSGAEAAVRSAVQKMGGE--EDTQAEMFWSELRNHNNAFFAATTGPTALWRLSLPSVAQPLALDG----EQLIEWGGAQRWLRSEADAATIRNVTAQAGGHATLYRGGDKSVGVFHPLAPAVAKIHRNLKQSFDPAGIFNRGRMYED 354          
BLAST of mRNA_P-wetherbeei_contig5711.2.1 vs. uniprot
Match: A0A1F4BD04_9PROT (Glycolate oxidase subunit GlcE n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_65_24 TaxID=1797489 RepID=A0A1F4BD04_9PROT)

HSP 1 Score: 416 bits (1070), Expect = 2.470e-142
Identity = 221/362 (61.05%), Postives = 261/362 (72.10%), Query Frame = 1
Query:    1 MQAAFDRIAERVRAAAAAGTGLRLRGGGTKDFYGGPLSGDVLDLREYAGITSYEPSELVATARCGTPLAEFEAALAANRQMLPFEPPHFGPGATLGGCVAAGLAGPRRAANGLYYGAARDYVLGCTLMDASGGAMRFGGQVMKNVAGYDVSRLATGSMGTLGAILEVSLKVLPMPVAVATLRFAVDEAGAIRRLNDWGGRPIPVSASAWEAGALAVRLEGAEAAVHSACASLGGERVEPSQADAYWQGLRNHTAPFFASSSGPLWRVSVPSTIPPIAPAGGSPFEQLVEWGGALRWWKTDADASAVRRAAKAVGGHATLFRGGNKSAGVFTPLDPVAARLHRNVKAVFDPAGIFNRGRMYPE 1086
            MQ   +R AER+RAAAA    LRLRGGGTKDFYG  L G+VLD R YAGI +YEP+ELV TARCGTPLAE EAAL    Q L FEPPHFGPGAT+GG +AAGL+GPRRA  G    A RD+VLG  ++D  G  + FGGQVMKNVAGYDVSR   GS+GTLG ILEVSLKV P+P A AT+R  + +  AI  LN WGG+P+P+SA AW  G L VRL GA +A+ +A  ++GGE +E  +A  +W G+R  T PFF S+  PLWR+SVPS  PP+A    SP EQL+EWGGA RW  + ADA  +R AA   GGHATLFR  +KSAGVFTPL P  A++H  +K  FDPAGIFN GRMYP+
Sbjct:    1 MQDVIERCAERIRAAAAGKKPLRLRGGGTKDFYGQALEGEVLDTRAYAGIIAYEPTELVITARCGTPLAELEAALRVEGQQLAFEPPHFGPGATVGGMIAAGLSGPRRACAG----AVRDFVLGVRMLDGRGDDLSFGGQVMKNVAGYDVSRPMAGSLGTLGLILEVSLKVPPLPFAEATIRLEMPQDKAIGILNHWGGKPLPISACAWAEGDLTVRLSGAASAIKAARETIGGESIEADEAMRFWLGIREQTDPFF-STDKPLWRLSVPSVTPPLA----SPGEQLIEWGGAERWLASSADARTIREAAAQAGGHATLFRASDKSAGVFTPLAPALAKIHHKLKQAFDPAGIFNPGRMYPD 353          
BLAST of mRNA_P-wetherbeei_contig5711.2.1 vs. uniprot
Match: A0A537BRH3_9PROT (Glycolate oxidase subunit GlcE n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BRH3_9PROT)

HSP 1 Score: 415 bits (1067), Expect = 7.060e-142
Identity = 221/362 (61.05%), Postives = 260/362 (71.82%), Query Frame = 1
Query:    1 MQAAFDRIAERVRAAAAAGTGLRLRGGGTKDFYGGPLSGDVLDLREYAGITSYEPSELVATARCGTPLAEFEAALAANRQMLPFEPPHFGPGATLGGCVAAGLAGPRRAANGLYYGAARDYVLGCTLMDASGGAMRFGGQVMKNVAGYDVSRLATGSMGTLGAILEVSLKVLPMPVAVATLRFAVDEAGAIRRLNDWGGRPIPVSASAWEAGALAVRLEGAEAAVHSACASLGGERVEPSQADAYWQGLRNHTAPFFASSSGPLWRVSVPSTIPPIAPAGGSPFEQLVEWGGALRWWKTDADASAVRRAAKAVGGHATLFRGGNKSAGVFTPLDPVAARLHRNVKAVFDPAGIFNRGRMYPE 1086
            M A  ++++E VRAA+ +   LRLRGGGTKDFYG  L G+VLD R Y+GI +YEPSELV TARCGT LA  E+A+    QML FEPPHFG GATLGG VAAGL+GPRR A G    A RD+VLG  +MD  G  + FGGQVMKNVAGYDVSRL  GS+GTLG IL+VSLK LP P A ATLR  + E  AI +LN WGG+P+P+ ASAW  G LAVRL GA AAV +A   +GGE VEP Q + +W G+R  T PFF + + PLWR+SVPST PP+      P E L+EWGGALRW  + ADA  VR AAK   GHATLFRGG+KS GVF PL P   ++H+ +K  FDP G+FNRGRMYPE
Sbjct:    1 MDAVLEKLSETVRAASRSKRALRLRGGGTKDFYGNALEGEVLDTRGYSGIVTYEPSELVITARCGTRLAATESAMRERGQMLAFEPPHFGEGATLGGMVAAGLSGPRRQAAG----ALRDFVLGVKIMDGRGDVLSFGGQVMKNVAGYDVSRLMAGSLGTLGIILDVSLKALPRPAAEATLRLELPEDKAIEQLNRWGGKPLPIGASAWTGGELAVRLSGAAAAVAAAQKQIGGELVEPEQGERFWTGIREQTDPFFRNDA-PLWRISVPSTTPPLK----LPGEPLIEWGGALRWLCSRADARTVRDAAKRARGHATLFRGGDKSVGVFQPLAPALMKIHKELKREFDPQGVFNRGRMYPE 353          
BLAST of mRNA_P-wetherbeei_contig5711.2.1 vs. uniprot
Match: A0A537B072_9PROT (Glycolate oxidase subunit GlcE n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537B072_9PROT)

HSP 1 Score: 413 bits (1062), Expect = 4.650e-141
Identity = 222/365 (60.82%), Postives = 257/365 (70.41%), Query Frame = 1
Query:    1 MQAAFDRIAERVRAAAAAGTGLRLRGGGTKDFYGGPLSGDVLDLREYAGITSYEPSELVATARCGTPLAEFEAALAANRQMLPFEPPHF---GPGATLGGCVAAGLAGPRRAANGLYYGAARDYVLGCTLMDASGGAMRFGGQVMKNVAGYDVSRLATGSMGTLGAILEVSLKVLPMPVAVATLRFAVDEAGAIRRLNDWGGRPIPVSASAWEAGALAVRLEGAEAAVHSACASLGGERVEPSQADAYWQGLRNHTAPFFASSSGPLWRVSVPSTIPPIAPAGGSPFEQLVEWGGALRWWKTDADASAVRRAAKAVGGHATLFRGGNKSAGVFTPLDPVAARLHRNVKAVFDPAGIFNRGRMYPE 1086
            M +  ++++E VRAA  A   LRLRGGGTKDFYG  L G+V D R Y GI +YEPSELV TARCGT LA+ E A++ +RQML FEPPHF   G GATLGG +AAGL+GPRR A G    A RD+VLG  +MD  G  + FGGQVMKNVAGYDVSRL  GS+GTLG ILEVSLK LP P A ATLR  + E  AI  LN WGGRP+P+SASAW    L VRL GA +AV +A   +GGE V+ +Q + +W G+R  T PFF     PLWRVSVPS  PP+      P E L+EWGGALRW  + ADA  VR AAK  GGHATLFRGG+KS GVF PLDP   ++HR +K  FDP GIFNRGRMYPE
Sbjct:    1 MDSVLEKLSELVRAAGRAKRALRLRGGGTKDFYGQALEGEVHDTRGYNGIVAYEPSELVITARCGTRLADIETAMSEHRQMLAFEPPHFAQFGSGATLGGVIAAGLSGPRRQAAG----ALRDFVLGVKIMDGRGEVLAFGGQVMKNVAGYDVSRLMAGSLGTLGIILEVSLKALPRPAAEATLRLELPEDKAIETLNKWGGRPLPISASAWTGRELGVRLSGAASAVAAAQKKIGGELVDAAQGERFWAGIREQTDPFFRDDGAPLWRVSVPSATPPLR----LPGEPLIEWGGALRWLCSRADARTVRDAAKRAGGHATLFRGGDKSVGVFQPLDPALTKIHRELKREFDPQGIFNRGRMYPE 357          
BLAST of mRNA_P-wetherbeei_contig5711.2.1 vs. uniprot
Match: A0A7V2M9Y5_9PROT (Glycolate oxidase subunit GlcE n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7V2M9Y5_9PROT)

HSP 1 Score: 410 bits (1055), Expect = 5.190e-140
Identity = 216/361 (59.83%), Postives = 263/361 (72.85%), Query Frame = 1
Query:   10 AFDRIAERVRAAAAAGTGLRLRGGGTKDFYGGPLSGDVLDLREYAG----ITSYEPSELVATARCGTPLAEFEAALAANRQMLPFEPPHFGPGATLGGCVAAGLAGPRRAANGLYYGAARDYVLGCTLMDASGGAMRFGGQVMKNVAGYDVSRLATGSMGTLGAILEVSLKVLPMPVAVATLRFAVDEAGAIRRLNDWGGRPIPVSASAWEAGALAVRLEGAEAAVHSACASLGGERVEPSQADAYWQGLRNHTAPFFASSSGPLWRVSVPSTIPPIAPAGGSPFEQLVEWGGALRWWKTDADASAVRRAAKAVGGHATLFRGGNKSAGVFTPLDPVAARLHRNVKAVFDPAGIFNRGRMY 1080
            A   + +R+RAAAAA   L++R GGTKDFYG P  GDVLD R Y G    I +YEP+ELV T RCG PLA+ EA L    QML FEPPHFG  AT+GGCVA GL+GPRRA  G    A RDYVLG  L+D  G  + FGG VMKNVAGYDV+R   GS+GTLG I EVSLKVLP P+A ATLRF  DEA A+RR+N+W G+P+P+SA+AW  G L VRL GA AA+ SA   +GG RV+ ++A ++W+G+R HT PFF  ++ PLWR+SVPST  P+A  G    EQL+EWGGALRW ++ A ASA+R  A A+GGHATLFRGG++  GVF PL+P  A++H+ +KA FDPAGIFN GRMY
Sbjct:    3 ALPELIDRIRAAAAAKQPLQIRAGGTKDFYGNPSRGDVLDPRGYGGHGDGIVAYEPTELVVTVRCGMPLAQLEAELDRKGQMLAFEPPHFGAAATVGGCVATGLSGPRRATAG----AVRDYVLGAKLVDGRGNLLSFGGTVMKNVAGYDVARALAGSLGTLGLIAEVSLKVLPKPMAEATLRFETDEATALRRMNEWAGQPLPISATAWHGGELHVRLSGAHAAIRSARERMGGARVDDARAASFWRGIREHTEPFFVFNA-PLWRLSVPSTAEPLALGG----EQLIEWGGALRWLRSTAPASAIRARAAALGGHATLFRGGDRLGGVFHPLEPAIAKIHQRLKAEFDPAGIFNPGRMY 354          
BLAST of mRNA_P-wetherbeei_contig5711.2.1 vs. uniprot
Match: A0A3A3FTK7_9BURK (Glycolate oxidase subunit GlcE n=1 Tax=Noviherbaspirillum saxi TaxID=2320863 RepID=A0A3A3FTK7_9BURK)

HSP 1 Score: 410 bits (1054), Expect = 6.870e-140
Identity = 217/362 (59.94%), Postives = 266/362 (73.48%), Query Frame = 1
Query:    1 MQAAFDRIAERVRAAAAAGTGLRLRGGGTKDFYGGPLSGDVLDLREYAGITSYEPSELVATARCGTPLAEFEAALAANRQMLPFEPPHFGPGATLGGCVAAGLAGPRRAANGLYYGAARDYVLGCTLMDASGGAMRFGGQVMKNVAGYDVSRLATGSMGTLGAILEVSLKVLPMPVAVATLRFAVDEAGAIRRLNDWGGRPIPVSASAWEAGALAVRLEGAEAAVHSACASLGGERVEPSQADAYWQGLRNHTAPFFASSSGP--LWRVSVPSTIPPIAPAGGSPFEQLVEWGGALRWWKTDADASAVRRAAKAVGGHATLFRGGNKSAGVFTPLDPVAARLHRNVKAVFDPAGIFNRGRMY 1080
            M+    +  + + +A AAGT LR+RGGGTKD+YG  L G +LD R YAGI +Y+P+ELV TAR GTPL+E EAALA + QML FEPP +G  +T+GG VAAGL+GPRR A     GA RD+VLG  LMDA G  + FGGQVMKNVAGYDVSRL  GS+GTLG ILEVSLKVLP P A  TLRF +++A AI RLN+WGG+P+P+SASAW  G L VRL GAEAA+ SA   +GGE  E +QAD +W+GLRN    +FA+ +GP  LWR+S+PST  P+   G    E LVEWGGA RW +T+ DA ++R AA+  GGHATLFRGG+K  GVF PL P  A++HR++K  FDP+GIFN GRMY
Sbjct:    1 MEQVLQQFRDSIASATAAGTALRIRGGGTKDWYGQALDGHILDTRAYAGIVAYDPTELVITARAGTPLSEIEAALAQHNQMLAFEPPRYGAASTIGGIVAAGLSGPRRQA----VGAVRDFVLGAVLMDAKGEVLHFGGQVMKNVAGYDVSRLLAGSLGTLGLILEVSLKVLPKPFAETTLRFDMNKAEAIERLNNWGGQPLPLSASAWHGGVLIVRLSGAEAALRSAVQKMGGE--EETQADMFWEGLRNQDNDYFAAITGPTALWRLSLPSTAVPLTLHG----EHLVEWGGAQRWLRTEIDADSIRAAAEQAGGHATLFRGGDKGIGVFHPLAPAVAKIHRHLKNAFDPSGIFNPGRMY 352          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5711.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4FCM4_9PROT4.200e-14862.26Glycolate oxidase subunit GlcE n=1 Tax=Betaproteob... [more]
A0A1F4DQ51_9PROT7.200e-14563.22Glycolate oxidase subunit GlcE n=2 Tax=unclassifie... [more]
A0A1F3YKG2_9PROT5.470e-14464.91Glycolate oxidase subunit GlcE n=2 Tax=unclassifie... [more]
UPI001C7F711F4.460e-14361.37glycolate oxidase subunit GlcE n=1 Tax=Noviherbasp... [more]
UPI00124F5C2C1.270e-14260.44glycolate oxidase subunit GlcE n=2 Tax=Noviherbasp... [more]
A0A1F4BD04_9PROT2.470e-14261.05Glycolate oxidase subunit GlcE n=1 Tax=Betaproteob... [more]
A0A537BRH3_9PROT7.060e-14261.05Glycolate oxidase subunit GlcE n=1 Tax=Betaproteob... [more]
A0A537B072_9PROT4.650e-14160.82Glycolate oxidase subunit GlcE n=1 Tax=Betaproteob... [more]
A0A7V2M9Y5_9PROT5.190e-14059.83Glycolate oxidase subunit GlcE n=1 Tax=Betaproteob... [more]
A0A3A3FTK7_9BURK6.870e-14059.94Glycolate oxidase subunit GlcE n=1 Tax=Noviherbasp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5711contigP-wetherbeei_contig5711:2595..3686 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog269482.Bcep1808_0694
Preferred nameglcE
PFAMsFAD-oxidase_C,FAD_binding_4
Model size1092
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC00042
KEGG koko:K11472
KEGG ReactionR00475
KEGG Pathwayko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.55e-141
EggNOG OGsCOG0277@1|root,COG0277@2|Bacteria,1MVYV@1224|Proteobacteria,2VHUQ@28216|Betaproteobacteria,1K1XC@119060|Burkholderiaceae
DescriptionPFAM FAD linked oxidase domain protein
Cds size1092
COG categoryC
BRITEko00000,ko00001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186847.6409633-CDS-P-wetherbeei_contig5711:2594..36861683186847.6409633-CDS-P-wetherbeei_contig5711:2594..3686Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5711 2595..3686 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5711.2.1prot_P-wetherbeei_contig5711.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5711 2595..3686 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5711.2.1

>prot_P-wetherbeei_contig5711.2.1 ID=prot_P-wetherbeei_contig5711.2.1|Name=mRNA_P-wetherbeei_contig5711.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=364bp
MQAAFDRIAERVRAAAAAGTGLRLRGGGTKDFYGGPLSGDVLDLREYAGI
TSYEPSELVATARCGTPLAEFEAALAANRQMLPFEPPHFGPGATLGGCVA
AGLAGPRRAANGLYYGAARDYVLGCTLMDASGGAMRFGGQVMKNVAGYDV
SRLATGSMGTLGAILEVSLKVLPMPVAVATLRFAVDEAGAIRRLNDWGGR
PIPVSASAWEAGALAVRLEGAEAAVHSACASLGGERVEPSQADAYWQGLR
NHTAPFFASSSGPLWRVSVPSTIPPIAPAGGSPFEQLVEWGGALRWWKTD
ADASAVRRAAKAVGGHATLFRGGNKSAGVFTPLDPVAARLHRNVKAVFDP
AGIFNRGRMYPEW*
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mRNA from alignment at P-wetherbeei_contig5711:2595..3686-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5711.2.1 ID=mRNA_P-wetherbeei_contig5711.2.1|Name=mRNA_P-wetherbeei_contig5711.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1092bp|location=Sequence derived from alignment at P-wetherbeei_contig5711:2595..3686- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGGCAGCCTTCGACCGGATTGCGGAGCGGGTACGCGCGGCGGCGGC TGCGGGCACGGGCCTGCGCCTGCGCGGTGGCGGCACCAAGGATTTCTACG GCGGGCCGCTGTCGGGCGACGTCCTCGACCTGCGCGAATACGCCGGCATC ACCAGCTATGAGCCCAGCGAACTGGTGGCCACCGCCCGCTGCGGCACGCC GCTTGCCGAGTTCGAGGCGGCGCTGGCCGCCAACCGGCAGATGCTCCCGT TCGAGCCGCCCCACTTCGGCCCCGGCGCCACGCTGGGCGGGTGCGTAGCG GCAGGGCTCGCCGGCCCGCGCCGCGCCGCCAACGGCCTCTATTACGGGGC TGCGCGCGACTACGTGCTCGGCTGCACGCTGATGGACGCCAGTGGCGGGG CGATGCGCTTCGGCGGGCAGGTCATGAAGAACGTGGCGGGCTACGACGTG TCGCGGCTGGCGACCGGGTCCATGGGCACGCTCGGCGCGATCCTCGAGGT GTCCCTGAAAGTACTGCCGATGCCGGTGGCCGTCGCCACGCTGCGGTTCG CCGTCGACGAGGCCGGGGCGATCCGGCGCCTCAACGACTGGGGCGGCCGG CCGATTCCCGTGAGTGCGAGCGCGTGGGAGGCAGGCGCGCTTGCGGTAAG GCTGGAAGGCGCGGAGGCCGCGGTCCACTCCGCGTGCGCGTCTCTTGGCG GCGAACGCGTCGAGCCATCGCAGGCCGATGCGTACTGGCAGGGATTGAGG AACCACACGGCGCCATTCTTCGCTTCATCATCGGGGCCGTTGTGGCGCGT ATCGGTGCCGTCGACGATACCGCCCATCGCGCCGGCCGGCGGATCGCCGT TCGAGCAACTGGTCGAATGGGGCGGCGCGTTGCGCTGGTGGAAGACCGAC GCCGATGCGTCCGCGGTGCGTCGGGCGGCCAAGGCGGTCGGCGGTCACGC GACGCTGTTTCGCGGCGGCAACAAGTCCGCCGGGGTGTTCACGCCGCTCG ATCCGGTGGCCGCGCGCCTGCACCGCAACGTAAAGGCCGTATTCGACCCG GCCGGAATCTTCAACCGCGGCCGGATGTACCCGGAATGGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5711:2595..3686-

>mRNA_P-wetherbeei_contig5711.2.1 ID=mRNA_P-wetherbeei_contig5711.2.1|Name=mRNA_P-wetherbeei_contig5711.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1092bp|location=Sequence derived from alignment at P-wetherbeei_contig5711:2595..3686- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGGCAGCCTTCGACCGGATTGCGGAGCGGGTACGCGCGGCGGCGGC
TGCGGGCACGGGCCTGCGCCTGCGCGGTGGCGGCACCAAGGATTTCTACG
GCGGGCCGCTGTCGGGCGACGTCCTCGACCTGCGCGAATACGCCGGCATC
ACCAGCTATGAGCCCAGCGAACTGGTGGCCACCGCCCGCTGCGGCACGCC
GCTTGCCGAGTTCGAGGCGGCGCTGGCCGCCAACCGGCAGATGCTCCCGT
TCGAGCCGCCCCACTTCGGCCCCGGCGCCACGCTGGGCGGGTGCGTAGCG
GCAGGGCTCGCCGGCCCGCGCCGCGCCGCCAACGGCCTCTATTACGGGGC
TGCGCGCGACTACGTGCTCGGCTGCACGCTGATGGACGCCAGTGGCGGGG
CGATGCGCTTCGGCGGGCAGGTCATGAAGAACGTGGCGGGCTACGACGTG
TCGCGGCTGGCGACCGGGTCCATGGGCACGCTCGGCGCGATCCTCGAGGT
GTCCCTGAAAGTACTGCCGATGCCGGTGGCCGTCGCCACGCTGCGGTTCG
CCGTCGACGAGGCCGGGGCGATCCGGCGCCTCAACGACTGGGGCGGCCGG
CCGATTCCCGTGAGTGCGAGCGCGTGGGAGGCAGGCGCGCTTGCGGTAAG
GCTGGAAGGCGCGGAGGCCGCGGTCCACTCCGCGTGCGCGTCTCTTGGCG
GCGAACGCGTCGAGCCATCGCAGGCCGATGCGTACTGGCAGGGATTGAGG
AACCACACGGCGCCATTCTTCGCTTCATCATCGGGGCCGTTGTGGCGCGT
ATCGGTGCCGTCGACGATACCGCCCATCGCGCCGGCCGGCGGATCGCCGT
TCGAGCAACTGGTCGAATGGGGCGGCGCGTTGCGCTGGTGGAAGACCGAC
GCCGATGCGTCCGCGGTGCGTCGGGCGGCCAAGGCGGTCGGCGGTCACGC
GACGCTGTTTCGCGGCGGCAACAAGTCCGCCGGGGTGTTCACGCCGCTCG
ATCCGGTGGCCGCGCGCCTGCACCGCAACGTAAAGGCCGTATTCGACCCG
GCCGGAATCTTCAACCGCGGCCGGATGTACCCGGAATGGTGA
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